BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016681
         (384 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224077264|ref|XP_002305195.1| predicted protein [Populus trichocarpa]
 gi|222848159|gb|EEE85706.1| predicted protein [Populus trichocarpa]
          Length = 556

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 247/380 (65%), Positives = 305/380 (80%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+FE+ FDVC  LE+  F+LSLISFNTLIHVV KSD++ L W+IY+HML    YPNEATI
Sbjct: 177 RMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATI 236

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            ++ISALCK G+LQT V+MLD+IHGKRCSP+VIVNT L+ RI++E R+E G+ LLK MLR
Sbjct: 237 ESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLR 296

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           KNMI DT+AYSLIVYAKVK+ NL SA+ VYEEMLKRGF+ANSFVYT+FIGAYC+  +IEE
Sbjct: 297 KNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEE 356

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           AN L+QEMEN GLKPY +TFN L+EGCAKA R+EE+LSYC++MM    +PS SAFNEM+ 
Sbjct: 357 ANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVG 416

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           +LC   +  +AN MLT  LD+GF  +EITYS+LI GYAK  +IQE+LKLYYEMEY+S+SP
Sbjct: 417 KLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEMEYRSLSP 476

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            L  +TSLI  LC CGKLEEA+KY +IM   SL P  D+YE+L+ ++ EKG+K +AL+L 
Sbjct: 477 GLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEKGDKRRALNLY 536

Query: 362 EEMVSEGLKPSTSYLCSAST 381
            EMVS+GLK   S+   AST
Sbjct: 537 NEMVSKGLKLCCSHYLGAST 556



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 4/281 (1%)

Query: 90  SPMVIVNTSLILRIIQEERIEE-GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           SP+V     L+++   ++R+ E G  +  R+         I+++ +++   K      A 
Sbjct: 162 SPLVF---DLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAW 218

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            +YE ML R    N     + I A C+ GK++    ++ ++      P       L+   
Sbjct: 219 KIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRI 278

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +  R+E  L+  + M+ + ++    A++ ++    + GN   A  +    L +GF+ N 
Sbjct: 279 LEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANS 338

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             Y+  IG Y KE  I+E  +L  EME   + P    +  L+    + G++EE   Y K 
Sbjct: 339 FVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKK 398

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           M     VP +  +  +VG      +  +A  +   ++ EG 
Sbjct: 399 MMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGF 439



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 68/336 (20%), Positives = 147/336 (43%), Gaps = 26/336 (7%)

Query: 44  RIYQHMLENIRYPNEAT---IRTLISALCKGGQLQTYVDMLDR-IHGKRCSPMVIVNTSL 99
           R+     E  R+ ++ T     T++S++C   +     D L+R     + + +++ N  +
Sbjct: 23  RVCSSWFEVARFLHDGTKTESDTVVSSICDSLRRGYNWDTLNRKFESLQLNNLLVKN--V 80

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-- 157
           +L + +    +  +       R+N +H   +Y L+++  ++ R +  A  + E +LK+  
Sbjct: 81  LLELKEPTDAKRALGFFHWSARRNFVHGVQSYCLMIHILIQARLIMDAQALLESLLKKSV 140

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G      V  + + +Y    KI  ++ L+              F+LL++  AK +  E  
Sbjct: 141 GDPTKFLVLDSLLSSY----KIIISSPLV--------------FDLLVQAYAKQRMFEIG 182

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              C ++   +   S  +FN +I  + +   +  A  +    L +   PNE T   +I  
Sbjct: 183 FDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISA 242

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             KEG++Q ++ +  ++  K  SP +   T L+  + + G++E      K+M   +++  
Sbjct: 243 LCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILD 302

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              Y  +V   ++ GN   A+ + EEM+  G   ++
Sbjct: 303 TVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANS 338



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 111/253 (43%)

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +I   + + L+V A  K R  E    V   + +  F+ +   + T I    +  K   
Sbjct: 157 KIIISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPL 216

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + + M +    P + T   +I    K  +++  ++  +++  ++  P       ++ 
Sbjct: 217 AWKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVF 276

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           R+ E G  +    +L + L K    + + YS ++    K G +   +++Y EM  +  + 
Sbjct: 277 RILEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNA 336

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               YTS I + C+  ++EEA++  + M++  L P  D +  L+    + G   + L  C
Sbjct: 337 NSFVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYC 396

Query: 362 EEMVSEGLKPSTS 374
           ++M+  G  PS S
Sbjct: 397 KKMMEMGHVPSLS 409


>gi|359488297|ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/376 (64%), Positives = 298/376 (79%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+FE+ FDVC YLE+ GFSLSLISFNTL+HVV KSD   LVW+IY+HM+   +YPNE +
Sbjct: 169 LRMFEICFDVCCYLEEHGFSLSLISFNTLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVS 228

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +  +ISALCK G LQ +VDMLDRIHGKRCSP+VIVNT +I R+++E R+E+GM++LKR+L
Sbjct: 229 VSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLL 288

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +KNMI DTI+YSLI YAKVK   L+SA  VYEEML RGF  N+FVYT FIG++C  G+IE
Sbjct: 289 QKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIE 348

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EAN LMQ+MENAGL PYDETFNLLI GC+KA R+EE L  CE+MM R L+PSC AFN M 
Sbjct: 349 EANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMA 408

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            +LCE G  K+A+ MLTL LDKGF P+EITYS+LI  Y K GEIQ+VLKLYYEMEY+S+S
Sbjct: 409 GKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLS 468

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P L A+ SLI SLCQC KLE+A+KY +IMK  S+     +YE+L+  + EKG++ +A  L
Sbjct: 469 PGLLAFESLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISSYFEKGDELRASQL 528

Query: 361 CEEMVSEGLKPSTSYL 376
             EMVS GLKPS SY+
Sbjct: 529 HNEMVSRGLKPSCSYM 544



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 112/303 (36%), Gaps = 52/303 (17%)

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           KN+ H   +Y + ++  V  + L  A  + E  LK+   +   V  + + +Y   G    
Sbjct: 98  KNLEHGLASYCITIHILVGAQLLMDAQSLLESTLKKNAGSRFLVVDSLLSSYNITGSNPR 157

Query: 182 ANCLMQE-----------------MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
              L+ +                 +E  G      +FN L+    K+          E M
Sbjct: 158 VFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNTLLHVVQKSDNYPLVWKIYEHM 217

Query: 225 MSRKLLPSCSAFNEMIRRLCECG---------------------------------NAKQ 251
           +  +  P+  + + MI  LC+ G                                   + 
Sbjct: 218 IRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRV 277

Query: 252 ANGMLTLA--LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             GML L   L K    + I+YS +     K G +    ++Y EM  +   P    YT  
Sbjct: 278 EQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLF 337

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I S C  G++EEA++  + M++  L+P  + +  L+    + G   + L LCE M+  GL
Sbjct: 338 IGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGL 397

Query: 370 KPS 372
            PS
Sbjct: 398 VPS 400


>gi|255580733|ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529229|gb|EEF31203.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 619

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/375 (62%), Positives = 293/375 (78%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RLFE+ F +C YLE+ GF LSL+SFNTLIHVV KSD+  LVW+IY+HM+    YPNEAT
Sbjct: 177 LRLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLVWKIYEHMIHKRIYPNEAT 236

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           IRT+I+ALCK G+LQ +VD+LDRIHGKRC P+VI+N  ++ RI+QE R++ G+ +LK ML
Sbjct: 237 IRTMINALCKEGKLQMFVDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGML 296

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +KNMI DT+AYSLIV+AKV++ NL+SAL VYE MLKRGF+ANSFV+T  IGAYC  GKIE
Sbjct: 297 QKNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIE 356

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +AN L  EM   GL+PYDETFN LIEGCAKA R+EE LSY E+M+ R L+PS  AFN+MI
Sbjct: 357 KANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMI 416

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            +LCE G   QAN  LT  LDKGFSP+E TYS+L+ GY ++ +IQEVLKLYYEMEY+ +S
Sbjct: 417 AKLCETGEVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYRPLS 476

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P L  +T LI SLC CGKLE+A+KY +IMK  SL P   +YE+L+  HLEK + A+AL L
Sbjct: 477 PGLLVFTPLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSDTARALQL 536

Query: 361 CEEMVSEGLKPSTSY 375
             EM+S+G  P  SY
Sbjct: 537 YNEMISKGFTPCCSY 551



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 114/306 (37%), Gaps = 54/306 (17%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS----------------- 163
           RKN +H   +Y L+V   V+ + L  A  + E +LK+    +S                 
Sbjct: 103 RKNFVHGVWSYCLMVNILVRAQLLNDAQALLESILKKNVEDSSEFLIVDSLLDSYKIIVS 162

Query: 164 --FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
              V+   + AY +    E    +   +E  G      +FN LI    K+ +        
Sbjct: 163 SPLVFNLLVQAYAKLRLFEIGFKICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLVWKIY 222

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCE------------------C----------------- 246
           E M+ +++ P+ +    MI  LC+                  C                 
Sbjct: 223 EHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCRPLVIINACMVFRILQE 282

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G      G+L   L K    + + YS ++    + G +   L++Y  M  +  +     +
Sbjct: 283 GRVDVGIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVH 342

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI + C  GK+E+A++ F  M +  L P  + +  L+    + G   + L   E+M+ 
Sbjct: 343 TVLIGAYCNGGKIEKANQLFGEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIE 402

Query: 367 EGLKPS 372
            GL PS
Sbjct: 403 RGLVPS 408


>gi|147856554|emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/366 (62%), Positives = 288/366 (78%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+FE+ FDVC YLE+ GFSLSLISFN L+HVV KSD   LVW+IY+HM+   +YPNE +
Sbjct: 169 LRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVS 228

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +  +ISALCK G LQ +VDMLDRIHGKRCSP+VIVNT +I R+++E R+E+GM++LKR+L
Sbjct: 229 VSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLL 288

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +KNMI DTI+YSLI YAKVK   L+SA  VYEEML RGF  N+FVYT FIG++C  G+IE
Sbjct: 289 QKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIE 348

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EAN LMQ+MENAGL PYDETFNLLI GC+KA R+EE L  CE+MM R L+PSC AFN M 
Sbjct: 349 EANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMA 408

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            +LCE G  K+A+ MLTL LDKGF P+EITYS+LI  Y K GEIQ+VLKLYYEMEY+S+S
Sbjct: 409 GKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLS 468

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P L  + S+I SLCQC KLE+A+KY +IMK  S+     +YE+L+  + EKG++ +A  L
Sbjct: 469 PGLLVFESIIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISGYFEKGDELRASQL 528

Query: 361 CEEMVS 366
             EM++
Sbjct: 529 HNEMLT 534



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 117/259 (45%), Gaps = 8/259 (3%)

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF----SANSFVYTTFIGA 172
           + M+R     + ++ S+++ A  K    E AL  + +ML R      S    V T  I  
Sbjct: 215 EHMIRVRKYPNEVSVSVMISALCK----EGALQKFVDMLDRIHGKRCSPIVIVNTCMIFR 270

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
             E G++E+   +++ +    +     +++L+     K   ++ +    E+M++R   P+
Sbjct: 271 MLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPN 330

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +   I   C  G  ++AN ++    + G  P + T++ LI G +K G ++E L+L  
Sbjct: 331 AFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCE 390

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            M  + + P+  A+  +   LC+ G ++ AD+   ++     VP    Y +L+  + + G
Sbjct: 391 RMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLG 450

Query: 353 NKAKALHLCEEMVSEGLKP 371
              + L L  EM    L P
Sbjct: 451 EIQQVLKLYYEMEYRSLSP 469



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 111/303 (36%), Gaps = 52/303 (17%)

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           KN+ H   +Y + ++  V    L  A  + E  LK+   +   V  + + +Y   G    
Sbjct: 98  KNLEHGVASYCITIHILVGAHLLMDAQSLLESTLKKNAGSRFLVVDSLLSSYNITGSNPR 157

Query: 182 ANCLMQE-----------------MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
              L+ +                 +E  G      +FN L+    K+          E M
Sbjct: 158 VFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIYEHM 217

Query: 225 MSRKLLPSCSAFNEMIRRLCECG---------------------------------NAKQ 251
           +  +  P+  + + MI  LC+ G                                   + 
Sbjct: 218 IRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRV 277

Query: 252 ANGMLTLA--LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             GML L   L K    + I+YS +     K G +    ++Y EM  +   P    YT  
Sbjct: 278 EQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLF 337

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I S C  G++EEA++  + M++  L+P  + +  L+    + G   + L LCE M+  GL
Sbjct: 338 IGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGL 397

Query: 370 KPS 372
            PS
Sbjct: 398 VPS 400


>gi|449530002|ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/368 (60%), Positives = 281/368 (76%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL + A  VC +LE+RGFSLSLISFNTLIHVV KSD+N  VW+IY+ M+    YPN  T
Sbjct: 172 LRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQNLKVWKIYEQMIRKRVYPNAIT 231

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +R +I++LCK G+LQ   DML+RIHG RCS  +IVN  LI RI++E R+E+G+ LLKRML
Sbjct: 232 VRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRML 291

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +KNM+ D IAYSLIVYAKVK  ++ S   V+EEM +RGF ANSF+YT FIG +C  GK+E
Sbjct: 292 QKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVE 351

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA+CLMQEMEN GLKPY ETFNLLIEGCA +   EE LS CE+M+ R  LPSCS FN  I
Sbjct: 352 EAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAI 411

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            ++CE G+ K+AN +LT+ LDKGF P+E TY++LI GY K GEIQE+LKLYYEM  + +S
Sbjct: 412 AKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGARLLS 471

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  + +LI SLCQ G+LEEA+KY KI+K  SL P + IY++L+  +L+KGN+AKAL L
Sbjct: 472 PGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILFYLKKGNRAKALEL 531

Query: 361 CEEMVSEG 368
             EM+ +G
Sbjct: 532 YNEMMFDG 539



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 117/286 (40%), Gaps = 51/286 (17%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           RKN  H   ++ ++++  VK R +  A  + E +LK+    NSF Y+             
Sbjct: 98  RKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKN-EGNSFDYSV------------ 144

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC------------------- 221
             + LM   E  G  P+   F+LL++ CAK + I+ +L  C                   
Sbjct: 145 -VDSLMDSYEVTGSSPF--VFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLI 201

Query: 222 ----------------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
                           EQM+ +++ P+      MI  LC+ G  ++ + ML        S
Sbjct: 202 HVVEKSDQNLKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCS 261

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + I  + LI    +EG +++ + L   M  K++     AY+ ++ +  + G +    + 
Sbjct: 262 ASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEV 321

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           F+ M          IY   +G+H   G   +A  L +EM + GLKP
Sbjct: 322 FEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGLKP 367


>gi|449445200|ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 221/368 (60%), Positives = 281/368 (76%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL + A  VC +LE+RGFSLSLISFNTLIHVV KSD N  VW+IY+ M+    YPN  T
Sbjct: 150 LRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKIYEQMIRKRVYPNAIT 209

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +R +I++LCK G+LQ   DML+RIHG RCS  +IVN  LI RI++E R+E+G+ LLKRML
Sbjct: 210 VRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRML 269

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +KNM+ D IAYSLIVYAKVK  ++ S   V+EEM +RGF ANSF+YT FIG +C  GK+E
Sbjct: 270 QKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVE 329

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA+CLMQEMEN GLKPY ETFNLLIEGCA +   EE LS CE+M+ R  LPSCS FN  I
Sbjct: 330 EAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAI 389

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            ++CE G+ K+AN +LT+ LDKGF P+E TY++LI GY K GEIQE+LKLYYEM  + +S
Sbjct: 390 DKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGARLLS 449

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  + +LI SLCQ G+LEEA+KY KI+K  SL P + IY++L+ ++L+KGN+AKAL L
Sbjct: 450 PGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALILLYLKKGNRAKALEL 509

Query: 361 CEEMVSEG 368
             EM+ +G
Sbjct: 510 YNEMMFDG 517



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 117/286 (40%), Gaps = 51/286 (17%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           RKN  H   ++ ++++  VK R +  A  + E +LK+    NSF Y+             
Sbjct: 76  RKNFNHGPQSFGIMIHILVKARLVLDARALLESILKKN-EGNSFDYSV------------ 122

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC------------------- 221
             + LM   E  G  P+   F+LL++ CAK + I+ +L  C                   
Sbjct: 123 -VDSLMDSYEVTGSSPF--VFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLI 179

Query: 222 ----------------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
                           EQM+ +++ P+      MI  LC+ G  ++ + ML        S
Sbjct: 180 HVVEKSDENLKVWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCS 239

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + I  + LI    +EG +++ + L   M  K++     AY+ ++ +  + G +    + 
Sbjct: 240 ASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEV 299

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           F+ M          IY   +G+H   G   +A  L +EM + GLKP
Sbjct: 300 FEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMENMGLKP 345


>gi|297838283|ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332864|gb|EFH63282.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 539

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/365 (53%), Positives = 261/365 (71%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  E+ F+V + L   GFSLS+I+ NTLIH   KS+R DLVWRIY+  ++   YPNE T
Sbjct: 171 IRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEFAIDKRIYPNETT 230

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           IR +IS LCK G+L+  VD+LDRI+GKRC P VIVNTSL+ R+++E+R+EE M LLKR+L
Sbjct: 231 IRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKRVEESMSLLKRLL 290

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            KNM+ D I YS++VYAK K  +LE A  V++EM++RGFSAN+FVYT F+   CE G +E
Sbjct: 291 MKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTAFVRVCCERGDVE 350

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  LM EME++G+ PY+ETFN LI GCA+  R E+ L YCE M++R L+PSCSAFN M+
Sbjct: 351 EAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARGLMPSCSAFNGMV 410

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +RL E  N  +AN +LT ++DKGF P+E TYSHLI G+ +   I + LKL+YEMEY+ IS
Sbjct: 411 KRLSEIDNVNRANEILTKSIDKGFVPDEHTYSHLIRGFVEGNSIDQALKLFYEMEYRKIS 470

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    + SLI  LC CGK+E  +KY +IMK   + P  DIYE+++    + G+K  A  +
Sbjct: 471 PGFEVFRSLIVGLCACGKVEAGEKYLRIMKRRLIEPNADIYEAMINAFQKIGDKTNADKV 530

Query: 361 CEEMV 365
             EM+
Sbjct: 531 YNEMI 535



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 115/251 (45%), Gaps = 4/251 (1%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + + L+V    K+R LE    V++ +   GFS +     T I    +  +++    + + 
Sbjct: 159 LVFDLLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEF 218

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
             +  + P + T  ++I    K  R++E +   +++  ++ LPS      ++ R+ E   
Sbjct: 219 AIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKR 278

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            +++  +L   L K    + I YS ++    K+G+++    ++ EM  +  S     YT+
Sbjct: 279 VEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTA 338

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            +   C+ G +EEA++    M+   + P  + +  L+      G + K L  CE MV+ G
Sbjct: 339 FVRVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARG 398

Query: 369 LKPSTSYLCSA 379
           L PS    CSA
Sbjct: 399 LMPS----CSA 405



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/264 (19%), Positives = 114/264 (43%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E G  + KR+         I  + +++   K   ++    +YE  + +    N      
Sbjct: 174 LELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEFAIDKRIYPNETTIRI 233

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C+ G+++E   L+  +      P       L+    + KR+EES+S  ++++ + 
Sbjct: 234 MISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKRVEESMSLLKRLLMKN 293

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           ++     ++ ++    + G+ + A  +    + +GFS N   Y+  +    + G+++E  
Sbjct: 294 MVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTAFVRVCCERGDVEEAE 353

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +L  EME   ++P    +  LI    + G+ E+  +Y +IM +  L+P    +  +V   
Sbjct: 354 RLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARGLMPSCSAFNGMVKRL 413

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            E  N  +A  +  + + +G  P 
Sbjct: 414 SEIDNVNRANEILTKSIDKGFVPD 437


>gi|30697337|ref|NP_849849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215314|sp|Q3ECH5.1|PP107_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g66345, mitochondrial; Flags: Precursor
 gi|332196377|gb|AEE34498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 544

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/366 (52%), Positives = 258/366 (70%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  E+ FDV + L   GF+LS+I+ NTLIH  +KS  +DLVWRIY+  ++   YPNE T
Sbjct: 177 IRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEIT 236

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           IR +I  LCK G+L+  VD+LDRI GKRC P VIVNTSL+ R+++E RIEE M LLKR+L
Sbjct: 237 IRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLL 296

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            KNM+ DTI YS++VYAK K  +L SA  V++EML+RGFSANSFVYT F+   CE G ++
Sbjct: 297 MKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVK 356

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L+ EME +G+ PYDETFN LI G A+    E+ L YCE M++R L+PSCSAFNEM+
Sbjct: 357 EAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMV 416

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           + + +  N  +AN +LT ++DKGF P+E TYSHLI G+ +  +I + LKL+YEMEY+ +S
Sbjct: 417 KSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMS 476

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    + SLI  LC CGK+E  +KY KIMK   + P  DIY++L+    + G+K  A  +
Sbjct: 477 PGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRV 536

Query: 361 CEEMVS 366
             EM+S
Sbjct: 537 YNEMIS 542



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 6/252 (2%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + + L+V    K+R LE    V++ +   GF+ +     T I  Y    KI++    + E
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLI-HYSSKSKIDDLVWRIYE 223

Query: 189 ME-NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
              +  + P + T  ++I+   K  R++E +   +++  ++ LPS      ++ R+ E  
Sbjct: 224 CAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             +++  +L   L K    + I YS ++   AKEG++    K++ EM  +  S     YT
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
             +   C+ G ++EA++    M+   + P  + +  L+G     G + K L  CE MV+ 
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403

Query: 368 GLKPSTSYLCSA 379
           GL PS    CSA
Sbjct: 404 GLMPS----CSA 411



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/328 (20%), Positives = 139/328 (42%), Gaps = 8/328 (2%)

Query: 48  HMLENIRYPNEATIRTLI-SALCKGGQLQTYVD-MLDRIHGKRCSPMVIVNTSLILRIIQ 105
           H+L   R   +A  R LI S+L         VD +LD       +P+V     L+++   
Sbjct: 121 HILVKARLLIDA--RALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVF---DLLVQCYA 175

Query: 106 EER-IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           + R +E G  + KR+         I  + +++   K +  +    +YE  + +    N  
Sbjct: 176 KIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEI 235

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
                I   C+ G+++E   L+  +      P       L+    +  RIEES+S  +++
Sbjct: 236 TIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL 295

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           + + ++     ++ ++    + G+   A  +    L +GFS N   Y+  +    ++G++
Sbjct: 296 LMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDV 355

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           +E  +L  EME   +SP    +  LI    + G  E+  +Y ++M +  L+P    +  +
Sbjct: 356 KEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEM 415

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           V    +  N  +A  +  + + +G  P 
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPD 443


>gi|356530235|ref|XP_003533688.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like, partial [Glycine max]
          Length = 541

 Score =  358 bits (918), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 172/382 (45%), Positives = 267/382 (69%), Gaps = 17/382 (4%)

Query: 2   RLFEVAFDVCRYLEQ-RGFSLSLIS--FNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPN 57
           +L +VAFD+CRY+E+ RGFS S+    FN L+H + +S++    VW +Y+ M+    YPN
Sbjct: 160 KLTDVAFDLCRYVEEERGFSSSVSVVSFNVLLHALQRSEKCGGSVWEVYEFMIRRRAYPN 219

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRI--------HGKRCSPMVIVNTSLILRIIQEERI 109
             ++R +I A+CK G+LQ  VD +DRI          +  SP +IVN  L+LRI+ + R+
Sbjct: 220 ATSLRIMIDAICKEGELQKIVDTVDRIIVGNNDCSRSRFRSPAMIVNCGLMLRILGKGRV 279

Query: 110 -----EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
                ++ +VLLKR+L+KN++H+ + YSL+V+AKV   +L+ A   Y EM++RGF  N+F
Sbjct: 280 AKSESDDVVVLLKRLLQKNLLHEKVVYSLVVHAKVVFGDLDYAWGFYLEMVQRGFEGNAF 339

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           VYT FIGA+C  G++ +A  L++EM+  GL+PY ETF  ++ GCA A+  E+ +S+ E+M
Sbjct: 340 VYTLFIGAFCREGRVGKAIGLLREMQGKGLRPYGETFEHIVVGCAAAEDSEQCVSFFEEM 399

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +    +P+C  FN+++ RLCE G  ++ANGMLT+ L+KGF PN++TY+HL+ GYA++ E+
Sbjct: 400 VRVGFVPACMVFNKVVERLCEKGKVEKANGMLTVLLEKGFLPNDVTYAHLMQGYARKEEV 459

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           QEVLKLYYEMEY+ +SP L  + +++   C+CGK+E+A+KY +IMK   + P V +Y++L
Sbjct: 460 QEVLKLYYEMEYRCVSPGLSVFGTIVQCFCRCGKVEDAEKYLRIMKGRLVRPDVSVYQAL 519

Query: 345 VGIHLEKGNKAKALHLCEEMVS 366
           +  +++KG  A+ALHL +EM S
Sbjct: 520 IDGYMKKGESARALHLRDEMAS 541



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/245 (19%), Positives = 96/245 (39%), Gaps = 23/245 (9%)

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA------------NCLMQEME--- 190
           S   VYE M++R    N+      I A C+ G++++             +C         
Sbjct: 203 SVWEVYEFMIRRRAYPNATSLRIMIDAICKEGELQKIVDTVDRIIVGNNDCSRSRFRSPA 262

Query: 191 ---NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
              N GL        +L +G       ++ +   ++++ + LL     ++ ++      G
Sbjct: 263 MIVNCGL-----MLRILGKGRVAKSESDDVVVLLKRLLQKNLLHEKVVYSLVVHAKVVFG 317

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
           +   A G     + +GF  N   Y+  IG + +EG + + + L  EM+ K + P    + 
Sbjct: 318 DLDYAWGFYLEMVQRGFEGNAFVYTLFIGAFCREGRVGKAIGLLREMQGKGLRPYGETFE 377

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            ++         E+   +F+ M     VP   ++  +V    EKG   KA  +   ++ +
Sbjct: 378 HIVVGCAAAEDSEQCVSFFEEMVRVGFVPACMVFNKVVERLCEKGKVEKANGMLTVLLEK 437

Query: 368 GLKPS 372
           G  P+
Sbjct: 438 GFLPN 442


>gi|125524596|gb|EAY72710.1| hypothetical protein OsI_00576 [Oryza sativa Indica Group]
          Length = 1121

 Score =  301 bits (771), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 148/383 (38%), Positives = 240/383 (62%), Gaps = 6/383 (1%)

Query: 2    RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
            RL E A + CRYL QRG   SL +FN ++H   ++ R  + W +++ M     Y N++T+
Sbjct: 700  RLPEEALEACRYLAQRGVVPSLPAFNAVLHAAQRTGRFGVAWEVFELMTLKRVYANQSTV 759

Query: 62   RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              +I  L + G L     +++RIHGK+C+P V+ + +L L+I +E R E+G++LL+RML+
Sbjct: 760  ELVIGVLSREGALARMAALVERIHGKKCAPGVVAHVALTLKIFEEGRTEQGILLLRRMLQ 819

Query: 122  KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
            +NM+ D IAYSLIV+A  +  +L+SA    ++M++RG   NSFVYT  I  +C  G ++E
Sbjct: 820  RNMVFDNIAYSLIVHAHCQAGDLKSACEQRDDMVRRGCRLNSFVYTCLIRVHCRAGDVDE 879

Query: 182  ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
            A  L +EM +  LKPYD T++ L  GC +  R++E   Y ++M+ +  +P     N+M+ 
Sbjct: 880  AMQLFEEMISIRLKPYDATYSHLTAGCFRQGRMKEGSEYMDKMLHQGSVPDIGTCNDMLE 939

Query: 242  RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             LC+ G+  +AN +LT  +DKGF P++ TY  +  GY K G+ Q ++K+Y+EME++ ++ 
Sbjct: 940  ALCDSGHVSKANELLTALMDKGFVPDQNTYLRMTNGYGKVGDAQGIIKIYHEMEHRGLNI 999

Query: 302  TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
             +  ++SLI +LC+CG L+EA+K+  I++   L P  +IY+ L+  + EKGN  KAL   
Sbjct: 1000 GVDVFSSLIRALCKCGDLKEAEKFLAILERKLLAPTSEIYDLLISGNCEKGNTKKALWFY 1059

Query: 362  EEMVS--EGLKPSTS----YLCS 378
            + M++  + L PS       LCS
Sbjct: 1060 DRMMTGNDKLVPSADTFMMLLCS 1082



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 18/247 (7%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN--SFVYTTFIGAYCEYGKIEEAN 183
           H   AY L+V+   +   +  A V+ E  + +  S++  S     F  AY          
Sbjct: 628 HTLRAYCLLVHLLSRAALIRDASVLLESAIAKHSSSSPASAFLDAFFAAY---------- 677

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
                 E++G        +LL+   A+A+  EE+L  C  +  R ++PS  AFN ++   
Sbjct: 678 ------EDSGTAATTRGLHLLVHAYARARLPEEALEACRYLAQRGVVPSLPAFNAVLHAA 731

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G    A  +  L   K    N+ T   +IG  ++EG +  +  L   +  K  +P +
Sbjct: 732 QRTGRFGVAWEVFELMTLKRVYANQSTVELVIGVLSREGALARMAALVERIHGKKCAPGV 791

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            A+ +L   + + G+ E+     + M   ++V     Y  +V  H + G+   A    ++
Sbjct: 792 VAHVALTLKIFEEGRTEQGILLLRRMLQRNMVFDNIAYSLIVHAHCQAGDLKSACEQRDD 851

Query: 364 MVSEGLK 370
           MV  G +
Sbjct: 852 MVRRGCR 858


>gi|326494726|dbj|BAJ94482.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  298 bits (764), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 145/375 (38%), Positives = 237/375 (63%), Gaps = 2/375 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL E A + CRYL  R    SL +FN ++H   ++ R  + W +++ M     Y +++T
Sbjct: 177 LRLPEEALEACRYLALRRVLPSLSAFNAVLHAAQRTVRFRVAWEVFELMTLKRVYASQST 236

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +  ++  L + G L     +++RIHGK+C+P V+ + +L L I +E R E+G++LL+RML
Sbjct: 237 VELVVGVLSREGALARTAALVERIHGKKCAPGVVAHVALALWIFEEGRTEKGILLLRRML 296

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++NM+ D +AYSL+V+A  ++ +LESA   +++M++RG   N FVYT  +G +C  G + 
Sbjct: 297 QRNMVFDDVAYSLMVHAHCRIGDLESAREQWDDMVRRGCRLNPFVYTCLVGVHCREGNVS 356

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L+QEM + GLKPYD T++ L+ GC + +R  E L Y ++M+   L+P     NE++
Sbjct: 357 EAMQLLQEMLSRGLKPYDATYSHLVTGCFRHERTGEGLEYFDKMLHEGLVPDIGTCNEIL 416

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             +C  G   +AN ++T  +DKG  P + TY  LI G+ K G+++ V+K+YYEME++ ++
Sbjct: 417 EAMCGAGEVGKANELVTAMIDKGIIPGQDTYRKLIDGFGKVGDVEGVVKIYYEMEHRGLN 476

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
                +TSLIS+LCQCG  +EA+K+  +M+  SL    DI + L+  + +KGN  +AL L
Sbjct: 477 HGSDFFTSLISALCQCGNPKEAEKFVYVMERKSLALTSDISDMLISSYCKKGNTKRALRL 536

Query: 361 CEEMV--SEGLKPST 373
            ++M+  SE L PS 
Sbjct: 537 YDKMITRSEKLIPSA 551



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 54/283 (19%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS--ANSFVYTTFIGAYCEYGKIEEAN 183
           H   +Y L+V+   +   +  A V+ +  + R  S  A+SF+   F  AY          
Sbjct: 107 HSLRSYCLLVHLLARAALISHASVLLQAAITRHSSSPASSFL-DAFFSAY---------- 155

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
                 E++G        +LL+   A+ +  EE+L  C  +  R++LPS SAFN ++   
Sbjct: 156 ------EDSGTAATTRGLHLLVHAYAQLRLPEEALEACRYLALRRVLPSLSAFNAVLHAA 209

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
                 + A  +  L   K    ++ T   ++G  ++EG +     L   +  K  +P +
Sbjct: 210 QRTVRFRVAWEVFELMTLKRVYASQSTVELVVGVLSREGALARTAALVERIHGKKCAPGV 269

Query: 304 PAYTSL-----------------------------------ISSLCQCGKLEEADKYFKI 328
            A+ +L                                   + + C+ G LE A + +  
Sbjct: 270 VAHVALALWIFEEGRTEKGILLLRRMLQRNMVFDDVAYSLMVHAHCRIGDLESAREQWDD 329

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           M          +Y  LVG+H  +GN ++A+ L +EM+S GLKP
Sbjct: 330 MVRRGCRLNPFVYTCLVGVHCREGNVSEAMQLLQEMLSRGLKP 372



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 2/230 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG  L+   +  L+ V  +        ++ Q ML     P +AT   L++   +  +  
Sbjct: 332 RRGCRLNPFVYTCLVGVHCREGNVSEAMQLLQEMLSRGLKPYDATYSHLVTGCFRHERTG 391

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             ++  D++  +   P +     ++  +     + +   L+  M+ K +I     Y  ++
Sbjct: 392 EGLEYFDKMLHEGLVPDIGTCNEILEAMCGAGEVGKANELVTAMIDKGIIPGQDTYRKLI 451

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K+ ++E  + +Y EM  RG +  S  +T+ I A C+ G  +EA   +  ME   L 
Sbjct: 452 DGFGKVGDVEGVVKIYYEMEHRGLNHGSDFFTSLISALCQCGNPKEAEKFVYVMERKSLA 511

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSR--KLLPSCSAFNEMIRRL 243
              +  ++LI    K    + +L   ++M++R  KL+PS   F  ++RR+
Sbjct: 512 LTSDISDMLISSYCKKGNTKRALRLYDKMITRSEKLIPSADTFMMLVRRV 561


>gi|413925717|gb|AFW65649.1| hypothetical protein ZEAMMB73_319816 [Zea mays]
 gi|414876127|tpg|DAA53258.1| TPA: hypothetical protein ZEAMMB73_690626 [Zea mays]
          Length = 580

 Score =  296 bits (759), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 146/370 (39%), Positives = 235/370 (63%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL   A + CRYL +RG   SL +FN  +H   ++   D+ W +++ M +   Y N++T
Sbjct: 185 LRLPGEALEACRYLARRGVLPSLSAFNAALHAAQRAGSFDVAWDVFELMTQKRMYANQST 244

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           I  +I  L + G+L   V +++RIHGK+C+P ++ + +L LR+I+E R+E+ ++LLKRML
Sbjct: 245 IELVIGVLSREGKLAKTVALVERIHGKKCAPGIVAHVALTLRMIEENRVEQVILLLKRML 304

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++N++ D IAYSLIV+A   + + +SAL   ++M+ RG   N+FVYT  I A+C  G ++
Sbjct: 305 QRNILLDDIAYSLIVHAYCHIGDAKSALEQCDDMVCRGRRLNAFVYTCLIRAHCCEGSMD 364

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A   +QEM + G KPYDET+N LI GC +   I+E L+Y + M     +    + N+M+
Sbjct: 365 KAARCLQEMLSMGTKPYDETYNHLIAGCFRQGMIKEGLAYFDNMHEEGFVLDIGSCNKML 424

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G  ++AN +LT  +DKG  P++ TY  LI GY K G+ Q ++ +Y+EME++ + 
Sbjct: 425 EGLCSSGEVRKANNLLTAMMDKGLLPDKDTYLSLINGYGKVGDAQCIVNIYHEMEHRRLD 484

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  +T+LI  LC+CG L+EA+K F  MK  +L    D+Y+ L+  + EK N  +AL L
Sbjct: 485 PGVEVFTALIKGLCRCGNLKEAEKLFAAMKKKTLASTSDLYDMLISGYCEKRNAKRALWL 544

Query: 361 CEEMVSEGLK 370
            ++M++E  K
Sbjct: 545 YDKMMTENEK 554



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 20/225 (8%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           LESA+  ++  L   FSA+ F+   F  AY                E++G        +L
Sbjct: 138 LESAISKHQSSL---FSASCFL-DAFFAAY----------------EDSGTAATTRGLHL 177

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+   A+ +   E+L  C  +  R +LPS SAFN  +      G+   A  +  L   K 
Sbjct: 178 LVHAYARLRLPGEALEACRYLARRGVLPSLSAFNAALHAAQRAGSFDVAWDVFELMTQKR 237

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              N+ T   +IG  ++EG++ + + L   +  K  +P + A+ +L   + +  ++E+  
Sbjct: 238 MYANQSTIELVIGVLSREGKLAKTVALVERIHGKKCAPGIVAHVALTLRMIEENRVEQVI 297

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
              K M   +++     Y  +V  +   G+   AL  C++MV  G
Sbjct: 298 LLLKRMLQRNILLDDIAYSLIVHAYCHIGDAKSALEQCDDMVCRG 342



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 98/237 (41%)

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           L+V+A  ++R    AL     + +RG   +   +   + A    G  + A  + + M   
Sbjct: 177 LLVHAYARLRLPGEALEACRYLARRGVLPSLSAFNAALHAAQRAGSFDVAWDVFELMTQK 236

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            +     T  L+I   ++  ++ ++++  E++  +K  P   A   +  R+ E    +Q 
Sbjct: 237 RMYANQSTIELVIGVLSREGKLAKTVALVERIHGKKCAPGIVAHVALTLRMIEENRVEQV 296

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L   L +    ++I YS ++  Y   G+ +  L+   +M  +        YT LI +
Sbjct: 297 ILLLKRMLQRNILLDDIAYSLIVHAYCHIGDAKSALEQCDDMVCRGRRLNAFVYTCLIRA 356

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            C  G +++A +  + M S    P  + Y  L+     +G   + L   + M  EG 
Sbjct: 357 HCCEGSMDKAARCLQEMLSMGTKPYDETYNHLIAGCFRQGMIKEGLAYFDNMHEEGF 413


>gi|242056245|ref|XP_002457268.1| hypothetical protein SORBIDRAFT_03g004480 [Sorghum bicolor]
 gi|241929243|gb|EES02388.1| hypothetical protein SORBIDRAFT_03g004480 [Sorghum bicolor]
          Length = 568

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 148/375 (39%), Positives = 235/375 (62%), Gaps = 2/375 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL   A + CRYL +RG   SL +FN  +H   ++    + W +++ M     Y N++T
Sbjct: 173 LRLPAEALEACRYLARRGVLPSLSAFNAALHAAQRAGSFGVAWEVFELMTLKRLYANKST 232

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +  +I  L + G+L     +++RIHGK+C+P ++ + +L LR+I+EER+E+ ++LLKRML
Sbjct: 233 VELVIGVLSREGKLARTAALVERIHGKKCAPGIVAHVALTLRMIEEERVEQVILLLKRML 292

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++N++ D IA+SL+V+A  ++ +L SAL   ++M++RG   N+FVYT  I  +C  G ++
Sbjct: 293 QRNILLDDIAHSLMVHAYCRIGDLMSALEQCDDMVRRGRRLNAFVYTCLIRVHCCEGCMD 352

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L QEM + G KPYD T+N LI GC +   I+E L+Y + M     +    + NEM+
Sbjct: 353 KAAQLHQEMLSMGAKPYDATYNHLIAGCFRQGMIKEGLAYFDNMHEEGFVLDIGSCNEML 412

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G   +AN +LT  +DKG  P++ TY  LI GY K G  Q ++ LY+EME++ + 
Sbjct: 413 EGLCNAGEVHRANNVLTAMMDKGLLPDQDTYLSLINGYGKVGNNQGIVNLYHEMEHRGLD 472

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  +T+LI  LCQCG L+EA+K+F +MK  ++ P  D+Y+ L+  + EK N  +AL L
Sbjct: 473 PGVEVFTTLIKGLCQCGNLKEAEKFFIMMKKKTVAPTSDLYDMLISGYCEKRNAKRALWL 532

Query: 361 CEEMVSEG--LKPST 373
            + MV+E   L PS 
Sbjct: 533 YDMMVAENERLVPSA 547



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 2/180 (1%)

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E++G        +LL+   A+ +   E+L  C  +  R +LPS SAFN  +      G+ 
Sbjct: 152 EDSGTAATTRGLHLLVHAYARLRLPAEALEACRYLARRGVLPSLSAFNAALHAAQRAGSF 211

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +  L   K    N+ T   +IG  ++EG++     L   +  K  +P + A+ +L
Sbjct: 212 GVAWEVFELMTLKRLYANKSTVELVIGVLSREGKLARTAALVERIHGKKCAPGIVAHVAL 271

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL-VGIHLEKGNKAKALHLCEEMVSEG 368
              + +  ++E+     K M   +++   DI  SL V  +   G+   AL  C++MV  G
Sbjct: 272 TLRMIEEERVEQVILLLKRMLQRNILLD-DIAHSLMVHAYCRIGDLMSALEQCDDMVRRG 330


>gi|357127456|ref|XP_003565396.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Brachypodium distachyon]
          Length = 577

 Score =  295 bits (755), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 140/370 (37%), Positives = 231/370 (62%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  E A + C YL +RG   SL +FN ++H   ++ R  + W +++ M     Y N+ T
Sbjct: 182 LRRPEEALEACHYLARRGVLPSLSAFNAVLHAAQRTGRFQVAWEVFELMTLKRVYANQGT 241

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +  +I  L + G L     +++RIHGK+C+P ++ + +L L I ++ R E+G +LL+RML
Sbjct: 242 VELVIGVLSREGALARMAALVERIHGKKCTPGIVAHVALALWIFKQGRTEQGTLLLRRML 301

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++N++ D IAYSLIV+A     +L+SA   +++M++RG   N+FVYT FIG  C  G + 
Sbjct: 302 QRNIVFDDIAYSLIVHAYCLNGDLKSAREQWDDMVRRGCHLNAFVYTCFIGGQCHEGNVN 361

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L+QEM +  LKPYD T++ LI GC +  R+E+   Y ++M+   L+P  +  NE++
Sbjct: 362 EAMQLLQEMLSIRLKPYDATYSHLITGCFRQGRVEKGSEYFDKMLHEGLVPDIATCNEIL 421

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             +CE G   +AN ++T  +DKG  P++ TY  LI GY K G+ Q ++K+Y+EME++ ++
Sbjct: 422 EAICEAGEVGKANELVTAMIDKGIIPDQDTYCRLIDGYGKVGDSQGIIKIYHEMEHRRLT 481

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
             +  +TS+I  LCQCG  +EA+KY  +M+   L P   I+++L+  + +KGN   AL L
Sbjct: 482 HGVEVFTSVIRGLCQCGNPKEAEKYVTVMERKLLAPTSGIHDTLISSYCKKGNTKSALRL 541

Query: 361 CEEMVSEGLK 370
            ++M++   K
Sbjct: 542 YDKMMTRDEK 551



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 112/279 (40%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+    Q  R EE +     + R+ ++    A++ +++A  +    + A  V+E M  + 
Sbjct: 175 LVHSYAQLRRPEEALEACHYLARRGVLPSLSAFNAVLHAAQRTGRFQVAWEVFELMTLKR 234

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
             AN       IG     G +     L++ +      P       L     K  R E+  
Sbjct: 235 VYANQGTVELVIGVLSREGALARMAALVERIHGKKCTPGIVAHVALALWIFKQGRTEQGT 294

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
               +M+ R ++    A++ ++   C  G+ K A       + +G   N   Y+  IGG 
Sbjct: 295 LLLRRMLQRNIVFDDIAYSLIVHAYCLNGDLKSAREQWDDMVRRGCHLNAFVYTCFIGGQ 354

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
             EG + E ++L  EM    + P    Y+ LI+   + G++E+  +YF  M    LVP +
Sbjct: 355 CHEGNVNEAMQLLQEMLSIRLKPYDATYSHLITGCFRQGRVEKGSEYFDKMLHEGLVPDI 414

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
                ++    E G   KA  L   M+ +G+ P     C
Sbjct: 415 ATCNEILEAICEAGEVGKANELVTAMIDKGIIPDQDTYC 453


>gi|125569196|gb|EAZ10711.1| hypothetical protein OsJ_00545 [Oryza sativa Japonica Group]
          Length = 616

 Score =  290 bits (743), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 136/350 (38%), Positives = 224/350 (64%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E A + CRYL QRG   SL +FN ++H   ++ R  + W +++ M     Y N++T+
Sbjct: 188 RLPEEALEACRYLAQRGVVPSLPAFNAVLHAAQRTGRFGVAWEVFELMTLKRVYANQSTV 247

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I  L + G L     +++RIHGK+C+P V+ + +L L+I +E R E+G++LL+RML+
Sbjct: 248 ELVIGVLSREGALARMAALVERIHGKKCAPGVVAHVALTLKIFEEGRTEQGILLLRRMLQ 307

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +NM+ D IAYSLIV+A  +  +L+SA    ++M++RG   NSFVYT  I  +C  G ++E
Sbjct: 308 RNMVFDNIAYSLIVHAHCQAGDLKSACEQRDDMVRRGCRLNSFVYTCLIRVHCRAGDVDE 367

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L +EM +  LKPYD T++ L  GC +  R++E   Y ++M+ +  +P     N+M+ 
Sbjct: 368 AMQLFEEMISIVLKPYDATYSHLTAGCFRQGRMKEGSEYMDKMLHQGSVPDIGTCNDMLE 427

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G+  +AN +LT  +DKGF P++ TY  +  GY K G+ Q ++K+Y+EME++ ++ 
Sbjct: 428 ALCDSGHVSKANELLTALMDKGFVPDQNTYLRMTNGYGKVGDAQGIIKIYHEMEHRGLNI 487

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +  ++SLI +LC+CG L+EA+K+  I++   L P  +IY+ L+  + EK
Sbjct: 488 GVDVFSSLIRALCKCGDLKEAEKFLAILERKLLAPTSEIYDLLISGNCEK 537



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/268 (19%), Positives = 112/268 (41%), Gaps = 1/268 (0%)

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           EE +   + + ++ ++    A++ +++A  +      A  V+E M  +   AN       
Sbjct: 191 EEALEACRYLAQRGVVPSLPAFNAVLHAAQRTGRFGVAWEVFELMTLKRVYANQSTVELV 250

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           IG     G +     L++ +      P       L     +  R E+ +    +M+ R +
Sbjct: 251 IGVLSREGALARMAALVERIHGKKCAPGVVAHVALTLKIFEEGRTEQGILLLRRMLQRNM 310

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           +    A++ ++   C+ G+ K A       + +G   N   Y+ LI  + + G++ E ++
Sbjct: 311 VFDNIAYSLIVHAHCQAGDLKSACEQRDDMVRRGCRLNSFVYTCLIRVHCRAGDVDEAMQ 370

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L+ EM    + P    Y+ L +   + G+++E  +Y   M     VP +     ++    
Sbjct: 371 LFEEMISIVLKPYDATYSHLTAGCFRQGRMKEGSEYMDKMLHQGSVPDIGTCNDMLEALC 430

Query: 350 EKGNKAKALHLCEEMVSEGLKPS-TSYL 376
           + G+ +KA  L   ++ +G  P   +YL
Sbjct: 431 DSGHVSKANELLTALMDKGFVPDQNTYL 458



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 18/247 (7%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN--SFVYTTFIGAYCEYGKIEEAN 183
           H   AY L+V+   +   +  A V+ E  + +  S++  S     F  AY          
Sbjct: 116 HTLRAYCLLVHLLSRAALIRDASVLLESAIAKHSSSSPASAFLDAFFAAY---------- 165

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
                 E++G        +LL+   A+A+  EE+L  C  +  R ++PS  AFN ++   
Sbjct: 166 ------EDSGTAATTRGLHLLVHAYARARLPEEALEACRYLAQRGVVPSLPAFNAVLHAA 219

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G    A  +  L   K    N+ T   +IG  ++EG +  +  L   +  K  +P +
Sbjct: 220 QRTGRFGVAWEVFELMTLKRVYANQSTVELVIGVLSREGALARMAALVERIHGKKCAPGV 279

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            A+ +L   + + G+ E+     + M   ++V     Y  +V  H + G+   A    ++
Sbjct: 280 VAHVALTLKIFEEGRTEQGILLLRRMLQRNMVFDNIAYSLIVHAHCQAGDLKSACEQRDD 339

Query: 364 MVSEGLK 370
           MV  G +
Sbjct: 340 MVRRGCR 346


>gi|297596186|ref|NP_001042144.2| Os01g0170800 [Oryza sativa Japonica Group]
 gi|55296338|dbj|BAD68254.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
           sativa Japonica Group]
 gi|215715201|dbj|BAG94952.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255672917|dbj|BAF04058.2| Os01g0170800 [Oryza sativa Japonica Group]
          Length = 348

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 208/322 (64%), Gaps = 2/322 (0%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           Y N++T+  +I  L + G L     +++RIHGK+C+P V+ + +L L+I +E R E+G++
Sbjct: 7   YANQSTVELVIGVLSREGALARMAALVERIHGKKCAPGVVAHVALTLKIFEEGRTEQGIL 66

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL+RML++NM+ D IAYSLIV+A  +  +L+SA    ++M++RG   NSFVYT  I  +C
Sbjct: 67  LLRRMLQRNMVFDNIAYSLIVHAHCQAGDLKSACEQRDDMVRRGCRLNSFVYTCLIRVHC 126

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G ++EA  L +EM +  LKPYD T++ L  GC +  R++E   Y ++M+ +  +P   
Sbjct: 127 RAGDVDEAMQLFEEMISIVLKPYDATYSHLTAGCFRQGRMKEGSEYMDKMLHQGSVPDIG 186

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             N+M+  LC+ G+  +AN +LT  +DKGF P++ TY  +  GY K G+ Q ++K+Y+EM
Sbjct: 187 TCNDMLEALCDSGHVSKANELLTALMDKGFVPDQNTYLRMTNGYGKVGDAQGIIKIYHEM 246

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
           E++ ++  +  ++SLI +LC+CG L+EA+K+  I++   L P  +IY+ L+  + EKGN 
Sbjct: 247 EHRGLNIGVDVFSSLIRALCKCGDLKEAEKFLAILERKLLAPTSEIYDLLISGNCEKGNT 306

Query: 355 AKALHLCEEMVS--EGLKPSTS 374
            KAL   + M++  + L PS  
Sbjct: 307 KKALWFYDRMMTGNDKLVPSAD 328



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 111/230 (48%), Gaps = 2/230 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG  L+   +  LI V  ++   D   ++++ M+  +  P +AT   L +   + G+++
Sbjct: 108 RRGCRLNSFVYTCLIRVHCRAGDVDEAMQLFEEMISIVLKPYDATYSHLTAGCFRQGRMK 167

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              + +D++  +   P +     ++  +     + +   LL  ++ K  + D   Y  + 
Sbjct: 168 EGSEYMDKMLHQGSVPDIGTCNDMLEALCDSGHVSKANELLTALMDKGFVPDQNTYLRMT 227

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K+ + +  + +Y EM  RG +    V+++ I A C+ G ++EA   +  +E   L 
Sbjct: 228 NGYGKVGDAQGIIKIYHEMEHRGLNIGVDVFSSLIRALCKCGDLKEAEKFLAILERKLLA 287

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMS--RKLLPSCSAFNEMIRRL 243
           P  E ++LLI G  +    +++L + ++MM+   KL+PS   F  ++RR+
Sbjct: 288 PTSEIYDLLISGNCEKGNTKKALWFYDRMMTGNDKLVPSADTFMMLVRRV 337



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 2/223 (0%)

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           LKR + AN       IG     G +     L++ +      P       L     +  R 
Sbjct: 3   LKRVY-ANQSTVELVIGVLSREGALARMAALVERIHGKKCAPGVVAHVALTLKIFEEGRT 61

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           E+ +    +M+ R ++    A++ ++   C+ G+ K A       + +G   N   Y+ L
Sbjct: 62  EQGILLLRRMLQRNMVFDNIAYSLIVHAHCQAGDLKSACEQRDDMVRRGCRLNSFVYTCL 121

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I  + + G++ E ++L+ EM    + P    Y+ L +   + G+++E  +Y   M     
Sbjct: 122 IRVHCRAGDVDEAMQLFEEMISIVLKPYDATYSHLTAGCFRQGRMKEGSEYMDKMLHQGS 181

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYL 376
           VP +     ++    + G+ +KA  L   ++ +G  P   +YL
Sbjct: 182 VPDIGTCNDMLEALCDSGHVSKANELLTALMDKGFVPDQNTYL 224


>gi|293335507|ref|NP_001169392.1| uncharacterized protein LOC100383260 [Zea mays]
 gi|224029055|gb|ACN33603.1| unknown [Zea mays]
          Length = 348

 Score =  260 bits (664), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 210/326 (64%), Gaps = 2/326 (0%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M +   Y N++TI  +I  L + G+L   V +++RIHGK+C+P ++ + +L LR+I+E R
Sbjct: 1   MTQKRMYANQSTIELVIGVLSREGKLAKTVALVERIHGKKCAPGIVAHVALTLRMIEENR 60

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E+ ++LLKRML++N++ D IAYSLIV+A   + + +SAL   ++M+ RG   N+FVYT 
Sbjct: 61  VEQVILLLKRMLQRNILLDDIAYSLIVHAYCHIGDAKSALEQCDDMVCRGRRLNAFVYTC 120

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I A+C  G +++A   +QEM + G KPYDET+N LI GC +   I+E L+Y + M    
Sbjct: 121 LIRAHCCEGSMDKAARCLQEMLSMGTKPYDETYNHLIAGCFRQGMIKEGLAYFDNMHEEG 180

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            +    + N+M+  LC  G  ++AN +LT  +DKG  P++ TY  LI GY K G+ Q ++
Sbjct: 181 FVLDIGSCNKMLEGLCSSGEVRKANNLLTAMMDKGLLPDKDTYLSLINGYGKVGDAQCIV 240

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            +Y+EME++ + P +  +T+LI  LC+CG L+EA+K F  MK  +L    D+Y+ L+  +
Sbjct: 241 NIYHEMEHRRLDPGVEVFTALIKGLCRCGNLKEAEKLFAAMKKKTLASTSDLYDMLISGY 300

Query: 349 LEKGNKAKALHLCEEMVSEG--LKPS 372
            EK N  +AL L ++M++E   L PS
Sbjct: 301 CEKRNAKRALWLYDKMMTENEKLVPS 326


>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 111/259 (42%), Positives = 160/259 (61%), Gaps = 23/259 (8%)

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           ++ ++ +  ++I D +AYSLIVY KV + +L+ AL +Y EM++RGFS +S VYT FI A+
Sbjct: 656 IVFRKSIYHSLIGDLVAYSLIVYVKVSLGDLDFALKMYNEMVRRGFSESSLVYT-FIRAF 714

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           CE G+++EA  LM EME  GL+ YDET+  +I GCA + R+ E  S  E+M+S   +PS 
Sbjct: 715 CEKGRVDEAIGLMTEMEGKGLRAYDETYECVIVGCADSGRLNECWSVFEEMLSVGFVPSG 774

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             F+++  +LC+ G  ++ N MLT+ LDKGF P++I                     YYE
Sbjct: 775 LLFDKVAEKLCD-GEVEKVNDMLTVLLDKGFLPSDI---------------------YYE 812

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           MEYKS+ P    Y+S+I   C   K+++A+KY +IMK  SL P V IYE L+  H++KGN
Sbjct: 813 MEYKSMCPGFSVYSSMIQCFCHLDKVDDAEKYLRIMKGRSLAPNVSIYEKLIADHMQKGN 872

Query: 354 KAKALHLCEEMVSEGLKPS 372
              AL L  EM S  L+ S
Sbjct: 873 DESALQLRNEMASLKLQCS 891



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/335 (22%), Positives = 148/335 (44%), Gaps = 41/335 (12%)

Query: 53  IRYPNEATIRT-------LISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRII 104
           IR  + AT+ +        IS LC+ G++     + D +  +  C    +++  +   +I
Sbjct: 33  IRSSSTATLTSEMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLI 92

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
            E R        K   R +     I ++ +V   +KM  +E A  ++ EM  R    N  
Sbjct: 93  NEAR--------KLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVR----NVV 140

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            + T I  Y   G+ +EA  L   M    +     ++N ++   A   RI+++     +M
Sbjct: 141 SWNTMIDGYARNGRTQEALDLFGRMPERNVV----SWNTVMTALAHCGRIDDAERLFNEM 196

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
             R ++    ++  M+  L + G    A  +     DK    N ++++ +I GYA+ G  
Sbjct: 197 RERDVV----SWTTMVAGLSKNGRVDAAREVF----DKMPIRNVVSWNAMIAGYAQNGRF 248

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            E LKL+  M  +     +P++ ++++   Q G L  A++ F  M   +++     + ++
Sbjct: 249 DEALKLFERMPERD----MPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVI----TWTAM 300

Query: 345 VGIHLEKGNKAKALHLCEEM-VSEGLKPSTSYLCS 378
           +  +++ G   +AL L  +M  ++GLKP+T    +
Sbjct: 301 MTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVT 335



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 53/337 (15%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+NT++  +    R D   R++  M E     +  +  T+++ L K G++    ++ 
Sbjct: 169 NVVSWNTVMTALAHCGRIDDAERLFNEMRER----DVVSWTTMVAGLSKNGRVDAAREVF 224

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D++  +     V+   ++I    Q  R +E + L +RM  ++M     +++ +V   ++ 
Sbjct: 225 DKMPIRN----VVSWNAMIAGYAQNGRFDEALKLFERMPERDMP----SWNTMVTGFIQN 276

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NAGLKPYDET 200
            +L  A  ++  M ++    N   +T  +  Y ++G  EEA  L  +M+ N GLKP   T
Sbjct: 277 GDLNRAEQLFHAMPQK----NVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGT 332

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS-------------------------- 234
           F  ++  C+    + E      QM+S+ +    +                          
Sbjct: 333 FVTVLGACSDLAGLPEG-QQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDG 391

Query: 235 --------AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
                   A+N MI      G   +A  +     + GF  N++TY  L+   +  G   E
Sbjct: 392 LSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDE 451

Query: 287 VLKLYYE-MEYKSISPTLPAYTSLISSLCQCGKLEEA 322
             K + E ++ + I      YT LI    + G+L+EA
Sbjct: 452 GFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEA 488



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/197 (20%), Positives = 77/197 (39%), Gaps = 22/197 (11%)

Query: 98  SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
           + I    ++ R++E + L+  M  K +      Y  ++        L     V+EEML  
Sbjct: 709 TFIRAFCEKGRVDEAIGLMTEMEGKGLRAYDETYECVIVGCADSGRLNECWSVFEEMLSV 768

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           GF  +  ++       C+ G++E+ N ++  + + G  P D  +                
Sbjct: 769 GFVPSGLLFDKVAEKLCD-GEVEKVNDMLTVLLDKGFLPSDIYY---------------- 811

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
                +M  + + P  S ++ MI+  C       A   L +   +  +PN   Y  LI  
Sbjct: 812 -----EMEYKSMCPGFSVYSSMIQCFCHLDKVDDAEKYLRIMKGRSLAPNVSIYEKLIAD 866

Query: 278 YAKEGEIQEVLKLYYEM 294
           + ++G  +  L+L  EM
Sbjct: 867 HMQKGNDESALQLRNEM 883


>gi|358344907|ref|XP_003636527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502462|gb|AES83665.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 263

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/328 (38%), Positives = 177/328 (53%), Gaps = 69/328 (21%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCS--PMVIVNTSLILRIIQE 106
           M+E   YPN  T + LI ALCK   L+  VD +DRI GKR S  P VIVN SL LR++++
Sbjct: 1   MIEKRVYPNVVTFKILIDALCKEKLLRRNVDNVDRIVGKRNSHFPSVIVNFSLSLRMMEK 60

Query: 107 ERIEEG--MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           E  EEG  + LLKR+L+KN+I +++AY LI +  V++ +L+ AL    EM++RGF  NSF
Sbjct: 61  EGEEEGKLVTLLKRLLQKNLIGNSVAYLLIFHVNVRLGDLDFAL----EMVRRGFCENSF 116

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            YT FI                          Y ET+  +I GCA + R+E   S  E+M
Sbjct: 117 AYTLFIRG-----------------------AYGETYESVIVGCADSGRLEGCWSVFEEM 153

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +S   +P CS+FN+++                                       K+ E+
Sbjct: 154 LSAGFVPCCSSFNKVVE--------------------------------------KKDEV 175

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           Q VLK YYEMEYKS+   L   +S+I  LC+CGK+++A+K  +IMK  SL P V IYE+L
Sbjct: 176 QGVLKRYYEMEYKSMCWGLSVVSSMIQCLCRCGKVDDAEKCLRIMKGRSLAPNVGIYETL 235

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  H++KGN  +A  L  EM S  L+ S
Sbjct: 236 ITCHVQKGNSVRAFQLRNEMASLELQRS 263


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 177/350 (50%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N ++  + K  R D +W++Y  M+     PN  T  TLI   C+ G       + D +  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           K+  P V++ T LI  +  E RI E   + + M    M+ +   Y+ ++    K+ +++ 
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +Y+EML  G   N   +   I   C+  ++  A   + +M + G+ P    +N LI+
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  KA  + E+LS   ++   ++LP    ++ +I+ LC     ++A+G+L     KGF P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N +TY+ LI GY KEG +++ +++  +M  K I P +  +++LI   C+ GK+E A   +
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
             M    L+P V  Y +L+  H + GN  +A  L +EM   GL P+   L
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 176/378 (46%), Gaps = 17/378 (4%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +   G   +L ++NT++    K         +YQ ML +   PN  T   LI  LCK 
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKT 311

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            ++ +    L  +      P + V   LI    +   + E + L   + +  ++ D   Y
Sbjct: 312 DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTY 371

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+++     +  +E A  + +EM K+GF  N+  Y T I  YC+ G +E+A  +  +M  
Sbjct: 372 SILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G++P   TF+ LI+G  KA ++E ++    +M+ + LLP   A+  +I    + GN K+
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKE 491

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY-------------EMEYKS 298
           A  +     + G  PN  T S LI G  K+G I + +KL+              E++   
Sbjct: 492 AFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSL 551

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI--HLEKGNKAK 356
            SP    YT+LI  LC  G++ +A K+F  M+   L P  D++  +V I  H    +   
Sbjct: 552 CSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP--DVFTCIVIIQGHFRAMHLRD 609

Query: 357 ALHLCEEMVSEGLKPSTS 374
            + L  +++  G+ P++S
Sbjct: 610 VMMLQADILKMGIIPNSS 627



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 148/329 (44%), Gaps = 40/329 (12%)

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           ++L R+   + +P V     LI+   +   +EE + +  +M   +++    A ++++   
Sbjct: 114 NVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGL 168

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG--------------------- 177
           VK    ++   VY +M+ RG S N   Y T I   C  G                     
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 178 --------------KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
                         +I EA  + + M N+G+ P   T+N +++G  K   ++++L   ++
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   LLP+   F  +I  LC+      A   L      G  PN   Y+ LI GY K G 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           + E L L+ E+E   I P +  Y+ LI  LC   ++EEAD   + MK    +P    Y +
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+  + ++GN  KA+ +C +M  +G++P+
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 13/281 (4%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + +++ LI  +   DR +    + Q M +    PN  T  TLI   CK G ++  +++ 
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  K   P +I  ++LI    +  ++E  M L   M+ K ++ D +AY+ ++    K 
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM-------------QE 188
            N + A  +++EM + G   N F  +  I   C+ G+I +A  L               E
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ++ +   P    +  LI+G     RI ++  +   M    L P       +I+      +
Sbjct: 547 LDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMH 606

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            +    +    L  G  PN   Y  L  GY + G ++  L+
Sbjct: 607 LRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 13/252 (5%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++GF  + +++NTLI    K    +    +   M E    PN  T  TLI   CK G+
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +   +  K   P V+  T+LI    ++   +E   L K M    +  +    S 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 134 IVYAKVKMRNLESALVVY-------------EEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    K   +  A+ ++              E+ +   S N  +YT  I   C  G+I 
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIF 573

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+    +M  +GL+P   T  ++I+G  +A  + + +     ++   ++P+ S +  + 
Sbjct: 574 KASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLA 633

Query: 241 RRLCECGNAKQA 252
           +   E G  K A
Sbjct: 634 KGYEESGYLKSA 645


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 177/350 (50%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N ++  + K  R D +W++Y  M+     PN  T  TLI   C+ G       + D +  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           K+  P V++ T LI  +  E RI E   + + M    M+ +   Y+ ++    K+ +++ 
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +Y+EML  G   N   +   I   C+  ++  A   + +M + G+ P    +N LI+
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  KA  + E+LS   ++   ++LP    ++ +I+ LC     ++A+G+L     KGF P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N +TY+ LI GY KEG +++ +++  +M  K I P +  +++LI   C+ GK+E A   +
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
             M    L+P V  Y +L+  H + GN  +A  L +EM   GL P+   L
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 156/325 (48%), Gaps = 7/325 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RLF+        +E++ F  +++ +  LI  +    R      +++ M  +   PN  T 
Sbjct: 214 RLFD------EMIEKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T++   CK   ++  +++   + G    P V+    LI  + + + +      L  M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ +   Y+ ++    K  NL  AL ++ E+ K     + F Y+  I   C   ++EE
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A+ L+QEM+  G  P   T+N LI+G  K   +E+++  C QM  + + P+   F+ +I 
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G  + A G+ T  + KG  P+ + Y+ LI G+ K+G  +E  +L+ EM+   + P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 302 TLPAYTSLISSLCQCGKLEEADKYF 326
            +   + LI  LC+ G++ +A K F
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 148/329 (44%), Gaps = 40/329 (12%)

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           ++L R+   + +P V     LI+   +   +EE + +  +M   +++    A ++++   
Sbjct: 114 NVLSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGL 168

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG--------------------- 177
           VK    ++   VY +M+ RG S N   Y T I   C  G                     
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 178 --------------KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
                         +I EA  + + M N+G+ P   T+N +++G  K   ++++L   ++
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   LLP+   F  +I  LC+      A   L      G  PN   Y+ LI GY K G 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           + E L L+ E+E   I P +  Y+ LI  LC   ++EEAD   + MK    +P    Y +
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+  + ++GN  KA+ +C +M  +G++P+
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPN 437



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/414 (22%), Positives = 166/414 (40%), Gaps = 57/414 (13%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++++F  LI  + K+D      +    M      PN      LI   CK G L   
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +   I      P V   + LI  +   +R+EE   LL+ M +K  + + + Y+ ++  
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  N+E A+ V  +M ++G   N   ++T I  YC+ GK+E A  L  EM   GL P 
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM-- 255
              +  LI+G  K    +E+    ++M    L P+    + +I  LC+ G    A  +  
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532

Query: 256 ------------------------LTLALDKGFS------------------PNEITYSH 273
                                   L L+L +G S                  P    ++H
Sbjct: 533 AKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTH 592

Query: 274 L--------IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC---GKLEEA 322
           L        +  Y +     +VL L++ +  +    ++ ++ SL+ +L  C     L E 
Sbjct: 593 LKPPKSNQTLKRYLQSSNTSKVL-LFFRILLRKNPSSIDSF-SLMFALKACTLKSSLVEG 650

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            +   ++ +    P + +  SL+ ++   GN A A ++ +E+ S+ L   TS +
Sbjct: 651 KQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVI 704



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 14/221 (6%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +LIS     G +    +M D I  K     +I  TS+I   +  +R  + + L ++M   
Sbjct: 671 SLISMYSATGNVADAHNMFDEIPSKN----LISWTSVISAYVDNQRPNKALQLFRQMQMD 726

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           ++  D +  ++ + A   +  L+    ++  +  RG   +  +  + I  Y + G+I  A
Sbjct: 727 DVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTA 786

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIR 241
                    + + P D TF  ++  C+ A  +EE   +   M     L P  S F  M+ 
Sbjct: 787 R------RFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVD 840

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            LC  G   +A   +   L     PN + +  L+G  + +G
Sbjct: 841 LLCRAGLLTEAYEFI---LKMPVRPNAVVWRTLLGACSLQG 878


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 176/350 (50%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N ++  + K  R D +W++Y  M+     PN  T  TLI   C+ G       + D +  
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           K+  P V++ T LI  +  E RI E   + + M    M+ +   Y+ ++    K+ +++ 
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +Y EML  G   N   +   I   C+  ++  A   + +M + G+ P    +N LI+
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  KA  + E+LS   ++   ++LP    ++ +I+ LC     ++A+G+L     KGF P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N +TY+ LI GY KEG +++ +++  +M  K I P +  +++LI   C+ GK+E A   +
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
             M    L+P V  Y +L+  H + GN  +A  L +EM   GL P+   L
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 175/378 (46%), Gaps = 17/378 (4%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +   G   +L ++NT++    K         +Y  ML +   PN  T   LI  LCK 
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKT 311

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            ++ +    L  +      P + V   LI    +   + E + L   + +  ++ D   Y
Sbjct: 312 DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTY 371

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+++     +  +E A  + +EM K+GF  N+  Y T I  YC+ G +E+A  +  +M  
Sbjct: 372 SILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G++P   TF+ LI+G  KA ++E ++    +M+ + LLP   A+  +I    + GN K+
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKE 491

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY-------------EMEYKS 298
           A  +     + G  PN  T S LI G  K+G I + +KL+              E++   
Sbjct: 492 AFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSL 551

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI--HLEKGNKAK 356
            SP    YT+LI  LC  G++ +A K+F  M+   L P  D++  +V I  H    +   
Sbjct: 552 CSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP--DVFTCIVIIQGHFRAMHLRD 609

Query: 357 ALHLCEEMVSEGLKPSTS 374
            + L  +++  G+ P++S
Sbjct: 610 VMMLQADILKMGIIPNSS 627



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 175/384 (45%), Gaps = 20/384 (5%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RLF+        +E++ F  +++ +  LI  +    R      +++ M  +   PN  T 
Sbjct: 214 RLFD------EMIEKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T++   CK   ++  +++   + G    P V+    LI  + + + +      L  M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ +   Y+ ++    K  NL  AL ++ E+ K     + F Y+  I   C   ++EE
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A+ L+QEM+  G  P   T+N LI+G  K   +E+++  C QM  + + P+   F+ +I 
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G  + A G+ T  + KG  P+ + Y+ LI G+ K+G  +E  +L+ EM+   + P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIM--------KSHSL-----VPGVDIYESLVGIH 348
            +   + LI  LC+ G++ +A K F           K++ L      P   +Y +L+   
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL 566

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
              G   KA     +M   GL+P 
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPD 590



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 171/387 (44%), Gaps = 48/387 (12%)

Query: 29  LIHVVTKSD---RNDLVWRIYQHMLENIRYPNEAT--IRTLISALCKGGQLQ---TYVDM 80
           L H V++     +N  ++    H+L   +   +A   +R LI  L K  + +   +  ++
Sbjct: 56  LFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVFNV 115

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L R+   + +P V     LI+   +   +EE + +  +M   +++    A ++++   VK
Sbjct: 116 LSRLESSKFTPNVF--GVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVK 170

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG----------------------- 177
               ++   VY +M+ RG S N   Y T I   C  G                       
Sbjct: 171 KGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 178 ------------KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
                       +I EA  + + M N+G+ P   T+N +++G  K   ++++L    +M+
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              LLP+   F  +I  LC+      A   L      G  PN   Y+ LI GY K G + 
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E L L+ E+E   I P +  Y+ LI  LC   ++EEAD   + MK    +P    Y +L+
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + ++GN  KA+ +C +M  +G++P+
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPN 437



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 13/282 (4%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + +++ LI  +   DR +    + Q M +    PN  T  TLI   CK G ++  +++ 
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  K   P +I  ++LI    +  ++E  M L   M+ K ++ D +AY+ ++    K 
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM-------------QE 188
            N + A  +++EM + G   N F  +  I   C+ G+I +A  L               E
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ++ +   P    +  LI+G     RI ++  +   M    L P       +I+      +
Sbjct: 547 LDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMH 606

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
            +    +    L  G  PN   Y  L  GY + G ++  L  
Sbjct: 607 LRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSF 648



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 13/252 (5%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++GF  + +++NTLI    K    +    +   M E    PN  T  TLI   CK G+
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +   +  K   P V+  T+LI    ++   +E   L K M    +  +    S 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 134 IVYAKVKMRNLESALVVY-------------EEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    K   +  A+ ++              E+ +   S N  +YT  I   C  G+I 
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIF 573

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+    +M  +GL+P   T  ++I+G  +A  + + +     ++   ++P+ S +  + 
Sbjct: 574 KASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLA 633

Query: 241 RRLCECGNAKQA 252
           +   E G  K A
Sbjct: 634 KGYEESGYLKSA 645



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 50/261 (19%), Positives = 107/261 (40%), Gaps = 27/261 (10%)

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           K  SP  I+     +    ++R  + + L ++M   +   D +  ++ + A   +  L+ 
Sbjct: 708 KPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDM 767

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
              ++  +  RG   +  +  + I  Y + G+I  A  L    +   +     T+  +I 
Sbjct: 768 GEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVT----TWTSMIV 823

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G A   + EE+L    +M            N+  R+     N +      +L L     P
Sbjct: 824 GHALHGQAEEALQLFTEMKET---------NKRARK-----NKRNGEXESSLVL-----P 864

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           N++T+  ++   +  G ++E  + +  M E  S+ P +  +  ++  LC+ G L EA ++
Sbjct: 865 NDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEF 924

Query: 326 FKIMKSHSLVPGVDIYESLVG 346
              M    + P   ++ +L+G
Sbjct: 925 ILKM---PVRPNAVVWRTLLG 942



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 74/185 (40%), Gaps = 21/185 (11%)

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L ++M+    +P   T  + +  CA    ++        +  R L       N +I    
Sbjct: 736 LFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYS 795

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS------ 298
           +CG    A  +     D     +  T++ +I G+A  G+ +E L+L+ EM+  +      
Sbjct: 796 KCGEIGTARRLF----DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKN 851

Query: 299 -------ISPTLPAYTSLISSLCQC---GKLEEADKYFKIMK-SHSLVPGVDIYESLVGI 347
                   S  LP   + +  L  C   G +EE  ++F+ MK  +SL P +  +  +V +
Sbjct: 852 KRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDL 911

Query: 348 HLEKG 352
               G
Sbjct: 912 LCRAG 916


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 183/352 (51%), Gaps = 2/352 (0%)

Query: 26  FNTLIHV-VTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           FN+++   +  + R DLV R+ + ML     PN+A +   I  LCK G+ +   ++  ++
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
            GK     V  + +LI  + Q   ++E   +LK M+   +  D I Y++++    K   +
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A+ + ++M+KRGF  + F +  F+  YC  GK+EE   L+ +M++ GLKP   T+  +
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  KAK + ++  Y  ++M   L P+   +N +I      GN   A G+L      G 
Sbjct: 569 IDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGI 628

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  +TY+ L+      G ++EV  ++ +   K I   +  YT +I   C+ GK++EA  
Sbjct: 629 QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVM 688

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP-STSY 375
           YFK M S  + P    Y +L+  + + GNK +A  L +EMVS G+ P S SY
Sbjct: 689 YFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSY 740



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/403 (22%), Positives = 161/403 (39%), Gaps = 37/403 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN-IRYPNEATIRTLI 65
           A D    L  RG S S+ + + L+  +    + D+  +++  M +     P+  T   +I
Sbjct: 159 AADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMI 218

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            ALC+ G++     ML  +      P V+    L+  + +  R+EE   L  RM+   + 
Sbjct: 219 KALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVR 278

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + + +++    + +       V +EM   G + N  +Y   IG +C  G   EA  L
Sbjct: 279 PSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKL 338

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM------ 239
             EM + G+K    T+NL+ +   K   +E +    ++M+   ++  CS FN +      
Sbjct: 339 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLR 398

Query: 240 ------------------------------IRRLCECGNAKQANGMLTLALDKGFSPNEI 269
                                         I+ LC+ G  ++A  +    L KG   N  
Sbjct: 399 GTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVA 458

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           T + LI G  +   ++E  K+   M    +      Y  +I   C+  K++EA +    M
Sbjct: 459 TSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM 518

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 P +  +   +  +   G   + LHL ++M SEGLKP 
Sbjct: 519 IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPD 561



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 120/238 (50%), Gaps = 2/238 (0%)

Query: 143 NLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            L+ A  V+ EM   +  + +   YT  I A C  G+I+ A  ++ E+  +G++P   T+
Sbjct: 190 QLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTY 249

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L++   K+ R+EE+     +M+  ++ PS   F  +I  L       +   +L     
Sbjct: 250 NVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQG 309

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G +PNE+ Y+ +IG + ++G   E LKL+ EM  K I  T+  Y  +  +LC+ G++E 
Sbjct: 310 FGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 369

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLE-KGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A+K    M    ++    ++ S+V  HL   G     L L  EM++  LKP+ + + +
Sbjct: 370 AEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTA 427



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/332 (18%), Positives = 142/332 (42%), Gaps = 35/332 (10%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G  +++ + N LIH + + +      ++ + M+ +    +  T   +I   CK  ++  
Sbjct: 451 KGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDE 510

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + + D +  +   P +      +       ++EE + LL +M  + +  D + Y  I+ 
Sbjct: 511 AIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIID 570

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K +++  A     E++K G   N+ +Y   IG Y   G I +A  ++  M+  G++P
Sbjct: 571 GYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQP 630

Query: 197 YDETFN-----------------------------------LLIEGCAKAKRIEESLSYC 221
              T+N                                   ++I+G  K  +I+E++ Y 
Sbjct: 631 TPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYF 690

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M SR + P+   +  ++    + GN ++A+ +    +  G  P+ ++Y+ LI G+ + 
Sbjct: 691 KEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEV 750

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             + ++++   EM  + +     +Y + +  +
Sbjct: 751 DSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 102/227 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G    ++++ T+I    K+            +++N   PN      LI    + G 
Sbjct: 553 MKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGN 612

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +LD +      P  +   SL+  +     +EE   +  + + K++    I Y++
Sbjct: 613 ISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTI 672

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    K+  ++ A++ ++EM  RG   N   YTT + AY + G  EEA+ L  EM + G
Sbjct: 673 IIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLG 732

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           + P   ++N LI G  +   +++ +    +M S+ L     ++N  +
Sbjct: 733 IVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFV 779



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 98/230 (42%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF   L +FN  +H      + + +  +   M      P+  T  T+I   CK   + 
Sbjct: 520 KRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMH 579

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              + L  +      P  ++  +LI    +   I + + +L  M    +    + Y+ ++
Sbjct: 580 KANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLM 639

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           Y       +E    V+ + + +        YT  I  +C+ GKI+EA    +EM + G+ 
Sbjct: 640 YWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIP 699

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           P   T+  L+   +K+   EE+    ++M+S  ++P   ++N +I   CE
Sbjct: 700 PNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 90/209 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + G   + + +N LI    ++        I   M  N   P   T  +L+  +C  G 
Sbjct: 588 LMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGL 647

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    +  +   K     VI  T +I    +  +I+E ++  K M  + +  + + Y+ 
Sbjct: 648 VEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTT 707

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++A  K  N E A  +++EM+  G   +S  Y T I  +CE   +++      EM +  
Sbjct: 708 LMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQV 767

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           LK    ++N  ++G       +E++S  E
Sbjct: 768 LKQDGCSYNAFVDGITTPWCQKEAVSNAE 796


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 187/350 (53%), Gaps = 1/350 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++NT+I+ ++KSDR D   R+ + M++N   PN  +  T++   CK  +++  + +L++
Sbjct: 45  VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 104

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  + C P V+  T++I  + + ++++E   ++ +M+++    + I Y  +V    ++ +
Sbjct: 105 MVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 164

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE-TFN 202
           L+ A+ +  +M +RG+  N+  Y   +   C   K++ A  L +EME +G  P D  T++
Sbjct: 165 LDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +++   K+ +++++    E M+S+   P+   ++ ++  LC+ G   +A  +L      
Sbjct: 225 TIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G SPN +TY+ +I G+ K G I E   L  EM      P +  YT L+ + C+CGK E+A
Sbjct: 285 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               ++M     VP +  Y SL+ +  +K    +A  L   M+ +G  P+
Sbjct: 345 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 394



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 172/336 (51%), Gaps = 4/336 (1%)

Query: 14  LEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           LEQ   RG    ++S+ T+I+ + K D+ D   R+   M++    PN  T  TL+   C+
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTI 129
            G L   V+++ ++  +   P  I   +++  +    +++  + L K M        D  
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            YS IV + VK   ++ A  + E M+ +G S N   Y++ +   C+ GK++EA  L+Q M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
             +G  P   T+N +I+G  K  RI+E+    E+M+     P+   +  ++   C+CG A
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           + A G++ + ++KG+ PN  TY+ L+  + K+ E++   +L   M  K   P + +Y ++
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           I+ LC+  K+ E     + M S++ VP +  + +++
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTII 437



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 189/408 (46%), Gaps = 37/408 (9%)

Query: 2   RLFEVAFDVCRYLEQRGF-SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           R  + A  + + +E+ G     + +++T++  + KS + D   R+ + M+     PN  T
Sbjct: 198 RKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVT 257

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +L+  LCK G+L     +L R+    CSP ++   ++I    +  RI+E   LL+ M+
Sbjct: 258 YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV 317

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 + + Y++++ A  K    E A+ + E M+++G+  N F Y + +  +C+  ++E
Sbjct: 318 DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVE 377

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+  M   G  P   ++N +I G  KA ++ E +   EQM+S   +P    FN +I
Sbjct: 378 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTII 437

Query: 241 RRLC---------ECGNAKQANG---------------------------MLTLALDKGF 264
             +C         E  N  Q +G                           +  +   +G 
Sbjct: 438 DAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGC 497

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           SP+ ITY+ +I G  K   +    KL+ +M    ++P    Y+ +ISSLC+   ++EA+ 
Sbjct: 498 SPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANN 557

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++M  +   PG   Y +L+    + GN  KAL + + ++S+G  P 
Sbjct: 558 VLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 605



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 173/358 (48%), Gaps = 1/358 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +++++  L+    K  + +    + + M+E    PN  T  +L+   CK  +++  
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  K C P V+   ++I  + +  ++ EG++LL++ML  N + D + ++ I+ A
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 439

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKP 196
             K   ++ A  ++  + + G + N   Y + +   C+  + ++A  L++EM    G  P
Sbjct: 440 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 499

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N +I+G  K+KR++ +     QM+S  L P    ++ +I  LC+     +AN +L
Sbjct: 500 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL 559

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            L L  GF P  ITY  LI G+ K G + + L++   +  K   P +  ++  I  L + 
Sbjct: 560 ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 619

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           G+L +A +  + M    LVP    Y +L+    +      A+ L E M   G +P  +
Sbjct: 620 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNA 677



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 153/312 (49%), Gaps = 2/312 (0%)

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           ++++  LC  GQ    V +  R   K C P  +   ++I  + + +R+++ + LL+ M+ 
Sbjct: 14  KSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVD 72

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                +  +Y+ +++   K   +E+AL + E+M+ RG   +   YTT I   C+  +++E
Sbjct: 73  NGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDE 132

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +M +M   G +P   T+  L++G  +   ++ ++    +M  R   P+   +N ++ 
Sbjct: 133 ACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMH 192

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEI-TYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            LC       A  +     + G  P ++ TYS ++    K G++ +  +L   M  K  S
Sbjct: 193 GLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCS 252

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y+SL+  LC+ GKL+EA    + M      P +  Y +++  H + G   +A HL
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312

Query: 361 CEEMVSEGLKPS 372
            EEMV  G +P+
Sbjct: 313 LEEMVDGGCQPN 324



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 173/369 (46%), Gaps = 4/369 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   + ++G+  +L ++N+L+ +  K D  +   ++   M++    PN  +  T+
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK  ++   V +L+++    C P ++   ++I  + +  R++    L   +     
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 461

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEML-KRGFSANSFVYTTFIGAYCEYGKIEEAN 183
             + + Y+ +V+   K R  + A  +  EM  K+G S +   Y T I   C+  +++ A 
Sbjct: 462 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 521

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M + GL P D T++++I    K + ++E+ +  E M+     P    +  +I   
Sbjct: 522 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 581

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ GN  +A  +L L L KG  P+ +T+S  I   +K G +++  +L   M    + P  
Sbjct: 582 CKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDT 641

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL--HLC 361
             Y +L+   C   + E+A   F++M+     P    Y +LVG HL      K L   + 
Sbjct: 642 VTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVG-HLVDKKSYKDLLAEVS 700

Query: 362 EEMVSEGLK 370
           + MV  G K
Sbjct: 701 KSMVDTGFK 709



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A +V   + + GF    I++ TLI    K+   D    I Q +L    YP+  T 
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 609

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              I  L K G                                   R+ +   LL+ MLR
Sbjct: 610 SIFIDWLSKRG-----------------------------------RLRQAGELLETMLR 634

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
             ++ DT+ Y+ ++         E A+ ++E M + G   ++  YTT +G
Sbjct: 635 AGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVG 684


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 175/360 (48%), Gaps = 4/360 (1%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           +   RGF  S  + N  +  + ++  +D +  +++ ML+    P+  T   +I +LC+  
Sbjct: 115 WAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMN 174

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           Q+     MLD+   +   P V V T L     +  R+++ + + + +       D IAY+
Sbjct: 175 QIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSP----DAIAYN 230

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I++   +  + + AL   +EM +R  + + F Y   I   C+  K ++A+ ++ EM + 
Sbjct: 231 AIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDR 290

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G+ P   TFN +++G  KA + E + S    M  R   PSC  +N +I  LC+  N  +A
Sbjct: 291 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 350

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++   +  GF P+ +TYS L  G  K G I E  +L  EM  K  +P L  Y +LI  
Sbjct: 351 KDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDG 410

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+  K E+A +  + + S   VP V  Y  +V    ++G   KAL + E M+  G  PS
Sbjct: 411 LCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 186/370 (50%), Gaps = 8/370 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++ + +  +G + +L+++NTLI  + K+ + +  + + + ++ +   P+  T   ++ 
Sbjct: 385 AFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVD 444

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L   + M++ +  + C+P VI  T+L+  + +  R++E   + K M+ K+   
Sbjct: 445 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 504

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF--VYTTFIGAYCEYGKIEEANC 184
           D +AY  +V    K    + A  V +     G     +  VY   +  YC+ G+++E   
Sbjct: 505 DALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPN 559

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + ++M   G  P  +T+N++++G  K  +++E+  + E M S   +P   ++N +I  L 
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +    K+A  +L   +  G  P+ +TY+ L+  + KE    + + +   M    + P   
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679

Query: 305 AYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            Y +LIS L Q  +L +A +   +++++  +V     Y +++    ++G   +AL L + 
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 739

Query: 364 MVSEGLKPST 373
           M   G++ +T
Sbjct: 740 MTGHGVEANT 749



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/398 (20%), Positives = 177/398 (44%), Gaps = 32/398 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  + + +R  +  + ++N LI  + K+ + D    +   M++    P+  T  +++ 
Sbjct: 245 ALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD 304

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+ +    +L  +  + C P      +LI  + +++ ++    L+   +    + 
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS++     K   ++ A  + +EM  +G + N   Y T I   C+  K E+A  L+
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + + ++G  P   T+ ++++G  K  R++++L   E M+ R   PS   +  ++  LC  
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484

Query: 247 GNAKQ--------------ANGMLTLALDKGF------------------SPNEITYSHL 274
           G   +              A+ +  ++L  G+                  +P    Y+ L
Sbjct: 485 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNAL 544

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           + GY KEG + E+  ++ +M  +   P +  Y  ++  LC+ GK++EA  + + M S   
Sbjct: 545 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC 604

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           VP V  Y  ++    +     +A  + ++M+  G+ P 
Sbjct: 605 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 642



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 166/353 (47%), Gaps = 3/353 (0%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S   I++N +IH   + +  D      + M E    P+  T   LI  LCK  +     +
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASE 282

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           ML  +  +  +P  +   S++  + +  + E    LL  M  +N       Y+ ++    
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K +N++ A  + +E +  GF  +   Y+      C+ G+I+EA  L++EM   G  P   
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N LI+G  KA + E++    E ++S   +P    +  ++  LC+ G   +A  M+   
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L +G +P+ ITY+ L+ G  + G + E   ++ EM  K  +    AY SL++  C+  + 
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 522

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +EA K    ++     P +D+Y +L+  + ++G   +  ++ E+M   G  P+
Sbjct: 523 KEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 572



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 158/345 (45%), Gaps = 4/345 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   + AF +    + RGF   +  +  L     K+ R      I++    NI  P+   
Sbjct: 173 MNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFR----NIPSPDAIA 228

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I   C+       ++ L  ++ ++ +P V     LI  + +  + ++   +L  M+
Sbjct: 229 YNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV 288

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  DT+ ++ I+    K    E A  +   M +R    +   Y T I   C+   ++
Sbjct: 289 DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVD 348

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+ E  ++G  P   T+++L +G  K  RI+E+    ++M  +   P+   +N +I
Sbjct: 349 RAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLI 408

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+    ++A  +L   +  GF P+ +TY+ ++ G  KEG + + LK+   M  +  +
Sbjct: 409 DGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 468

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           P++  YT+L+  LC+ G+++EA   FK M S         Y SLV
Sbjct: 469 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 177/391 (45%), Gaps = 51/391 (13%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDMLD 82
           +++ +L++   KS R     +  Q +++ IR  P       L+   CK G+L    ++ +
Sbjct: 507 LAYVSLVNGYCKSSRT----KEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 562

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +  + C P +     ++  + +  +++E    L+ M     + D ++Y++I+    K  
Sbjct: 563 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 622

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
             + A  V ++M++ G   ++  Y T +  +C+  + ++A  +++ M  AG+ P + T+N
Sbjct: 623 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 682

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRK-LLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            LI G ++  R+ ++     +M+    ++ +C+ +N +I RLC+ G  KQA  ++     
Sbjct: 683 TLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG 742

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP---AYTSLISSLCQCGK 318
            G   N +TY+  I    KEG + E   L  EM+      TL    +YT++I  LC+  +
Sbjct: 743 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD------TLRDEVSYTTVIIGLCKAEQ 796

Query: 319 LEEADKYFKIM--------KSHSLVPGVDIYE---------SLVGIHLEKGNKA------ 355
           L+ A K  + M         SH+    +D +          +L+G+ +++G         
Sbjct: 797 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856

Query: 356 -------------KALHLCEEMVSEGLKPST 373
                        KA  L +EM   G+  S+
Sbjct: 857 MVITCLCKLDKVDKAWELFDEMAVRGIVASS 887



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 156/328 (47%), Gaps = 7/328 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     +   G    ++S+N +I  + K+ +     ++   M++    P+  T  TL++
Sbjct: 592 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 651

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-MI 125
             CK  +    V +L  +      P  +   +LI  + Q  R+ +   L+  MLR   ++
Sbjct: 652 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 711

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
                Y+ I+    K   L+ AL++ + M   G  AN+  Y  FI   C+ G+++EA+ L
Sbjct: 712 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 771

Query: 186 MQEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRK-LLPSCSAFNEMIRRL 243
           + EM+       DE ++  +I G  KA++++ +     +M++ K L  +   FN +I   
Sbjct: 772 LSEMDTL----RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 827

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +     +A  +L L + +G SP+ ITY+ +I    K  ++ +  +L+ EM  + I  + 
Sbjct: 828 TKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASS 887

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKS 331
            +YT LI  LC  G+ +EA +  + M S
Sbjct: 888 VSYTVLIYGLCGQGRGKEALQVLEEMAS 915



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 157/375 (41%), Gaps = 34/375 (9%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N L+    K  R D +  +++ M      PN  T   ++  LCK G++      L+ +H
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
              C P V+    +I  + +  + +E   +L +M++  +  D + Y+ ++    K    +
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 660

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLL 204
            A+ + + M+K G   ++  Y T I    +  ++ +A  LM EM  N  +     T+N +
Sbjct: 661 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 720

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT------- 257
           I+   K   ++++L   + M    +  +   +N  I RLC+ G   +A+ +L+       
Sbjct: 721 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 780

Query: 258 --------------------------LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
                                     +   KG      T++ LI  + K   + E L L 
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
             M  +  SP++  Y  +I+ LC+  K+++A + F  M    +V     Y  L+     +
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900

Query: 352 GNKAKALHLCEEMVS 366
           G   +AL + EEM S
Sbjct: 901 GRGKEALQVLEEMAS 915



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 112/264 (42%), Gaps = 31/264 (11%)

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           ++++ ++A+V +     RGF  ++F    F+    E G  +    + + M +AG  P   
Sbjct: 102 RLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSY 161

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA------- 252
           T++L+I+   +  +I+++ +  ++   R   P  S +  + R  C+ G  K A       
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221

Query: 253 ---------------------NGMLTLAL---DKGFSPNEITYSHLIGGYAKEGEIQEVL 288
                                +G L       ++  +P+  TY+ LI G  K  +  +  
Sbjct: 222 PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           ++ +EM  + ++P    + S++  LC+ GK E A     +M   +  P    Y +L+   
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++ N  +A  L +E VS G  P 
Sbjct: 342 CKQQNVDRAKDLVDEFVSSGFVPD 365



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++   G   + +++N  I  + K  R D    +   M + +R  +E +  T+I  LCK  
Sbjct: 739 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM-DTLR--DEVSYTTVIIGLCKAE 795

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVN----TS-----LILRIIQEERIEEGMVLLKRMLRKN 123
           QL       DR   K    MV V     TS     LI    + +R++E + LL  M+++ 
Sbjct: 796 QL-------DRA-SKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG 847

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                I Y++++    K+  ++ A  +++EM  RG  A+S  YT  I   C  G+ +EA 
Sbjct: 848 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 907

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
            +++EM ++      E  +L  E  A   + + +   C
Sbjct: 908 QVLEEMASSDC----EIDDLKWEDVAPHSQFQTTFGPC 941


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 182/364 (50%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +   G SL++ S+N LI     +   ++  R ++ M  N   PN  T  T+I A C
Sbjct: 190 VYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYC 249

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K  ++     +L  +  +   P ++    +I  + +  RIEE   +L  M RK    D +
Sbjct: 250 KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ +V    K+ N   ALV++ EML+ G   +   YT+ I   C+ G +  A     +M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              GL+P   T+  LI G ++   ++E+    ++M+     P+   +N ++   C  G  
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A G+L     KG SP+ ++YS +I G+ +  E+    ++  EM  K +SP    Y+SL
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+  +L EA   F+ M + SL+P    Y SL+  + ++G+  +AL+L +EM+ +G 
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGF 549

Query: 370 KPST 373
            P T
Sbjct: 550 LPDT 553



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 176/375 (46%), Gaps = 15/375 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++GF+   +++NTL++   K         ++  ML N   P+  T  +LI+ +CK G 
Sbjct: 299 MDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGN 358

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   ++  D++H +   P  +  TSLI    Q+  ++E   +   M+R       + Y+ 
Sbjct: 359 LNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNA 418

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        +E A+ +   M  +G S +   Y+T I  +C Y +++ A  +  EM   G
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ LI+G  + +R+ E+    ++M+++ LLP    +  +I   C+ G+  +A 
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS- 312
            +    + KGF P+ +TY+ LI G  K+   +E  +L  ++ Y    P    Y +LI S 
Sbjct: 539 NLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESC 598

Query: 313 --------------LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
                          C  G + EAD+ F+ M   +  P   +Y  ++  H   GN  KA 
Sbjct: 599 SDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAH 658

Query: 359 HLCEEMVSEGLKPST 373
            L +EMV  G  P T
Sbjct: 659 KLYKEMVDFGFIPHT 673



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 157/325 (48%), Gaps = 2/325 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           +++++NT+I    K  R D  +++ + M LE +  PN  T   +I+ LC+ G+++    +
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLE-PNLLTYNMVINGLCRVGRIEETSGV 295

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L  +  K  +P  +   +L+    +     + +VL   MLR  +  D + Y+ ++    K
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK 355

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             NL  A+  +++M  RG   N   YT+ I  + + G ++EA  +  EM  +G  P   T
Sbjct: 356 AGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVT 415

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N L+ G   + R+EE++     M  + L P   +++ +I   C      +A  M    +
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           +KG SP+ ITYS LI G  ++  + E   L+ EM  KS+ P    YTSLI+  C+ G L 
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLN 535

Query: 321 EADKYFKIMKSHSLVPGVDIYESLV 345
           EA      M     +P    Y  L+
Sbjct: 536 EALNLHDEMIKKGFLPDTVTYNVLI 560



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 176/379 (46%), Gaps = 15/379 (3%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG   + +++ +LI+  ++    D  +RI+  M+ +   P   T   L++  C  G+++ 
Sbjct: 372 RGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEE 431

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +L  + GK  SP V+  +++I    + + ++    +   M+ K +  D I YS ++ 
Sbjct: 432 AIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQ 491

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              + R L  A  +++EML +    + F YT+ I  YC+ G + EA  L  EM   G  P
Sbjct: 492 GLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP 551

Query: 197 YDETFNLLIEGCAK------AKRIEESLSYCEQMMS----RKLLPSCSAFN-----EMIR 241
              T+N+LI G  K      AKR+   L Y E + +      L+ SCS         +I+
Sbjct: 552 DTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIK 611

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  G   +A+ +    + +   PNE  Y+ +I G+ ++G + +  KLY EM      P
Sbjct: 612 GFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIP 671

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
                 +L+ +L   G  E+ +   + +     +   ++ ++LV I+ ++GN     +L 
Sbjct: 672 HTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLL 731

Query: 362 EEMVSEGLKPSTSYLCSAS 380
            EM  +G  PS +   +A 
Sbjct: 732 TEMAKDGFLPSGAAPANAG 750



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 1/246 (0%)

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK-IEEANCLM 186
           +  + L+V +   +  +E AL + +     GF      Y   + +     K +  A  + 
Sbjct: 132 SAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVY 191

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM  +G+     ++N+LI G   A  +E  L + E+M   + LP+   +N +I   C+ 
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +L     +G  PN +TY+ +I G  + G I+E   +  EM+ K  +P    Y
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +L++  C+ G   +A      M  + L P V  Y SL+    + GN  +A+   ++M  
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371

Query: 367 EGLKPS 372
            GL+P+
Sbjct: 372 RGLRPN 377



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 137/314 (43%), Gaps = 17/314 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + R +E +G S  ++S++T+I    +    D  +++   M+E    P+  T  +L
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC+  +L    D+   +  K   P     TSLI    +E  + E + L   M++K  
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGF 549

Query: 125 IHDTIAYSLIVYA---KVKMRNLESAL--VVYEEMLKRGFSANSFV----------YTTF 169
           + DT+ Y++++     + + R  +  L  + Y+E +  G + ++ +              
Sbjct: 550 LPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVAL 609

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  +C  G + EA+ + + M     KP +  +N++I G  +   + ++    ++M+    
Sbjct: 610 IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGF 669

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDK-GFSPNEITYSHLIGGYAKEGEIQEVL 288
           +P       +++ L   G  +Q N ++   L     S  E++ + L+    KEG I  V 
Sbjct: 670 IPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKA-LVQINHKEGNIDAVF 728

Query: 289 KLYYEMEYKSISPT 302
            L  EM      P+
Sbjct: 729 NLLTEMAKDGFLPS 742


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 160/315 (50%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            T    I+ LCK  ++   V++   +  K     ++   +L+L + + +  E GM ++  
Sbjct: 261 VTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDE 320

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+    +    A S ++   +KM ++E A  +  ++ K G   N FVY + I + C+ GK
Sbjct: 321 MIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGK 380

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +EEA  L   M   GL P D T+ +LI+G  +  +++ +  Y  +M+   +  +  ++N 
Sbjct: 381 LEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNS 440

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           MI   C+ G  K A  +    +DKG  P   TY+ LI GY K+G + +  KLY+EM  K 
Sbjct: 441 MINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKG 500

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I+P    +T+LI  LCQ  K+ EA K F  M    ++P    Y  L+  H  +GN  +A 
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAF 560

Query: 359 HLCEEMVSEGLKPST 373
            L +EM+ +GL P T
Sbjct: 561 ELLDEMIKKGLSPDT 575



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 182/369 (49%), Gaps = 1/369 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R++E A +V R L ++G    L+++ TL+  + +    ++   +   M+E    P+EA +
Sbjct: 275 RVWE-AVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAV 333

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI  L K G ++   ++L+++      P + V  S+I  + +  ++EE  +L   M  
Sbjct: 334 SGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAE 393

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  + + Y++++    +   L+ A   + +M++ G SA  + Y + I   C++GK++ 
Sbjct: 394 RGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKM 453

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L +EM + GLKP   T+  LI G  K   + ++     +M  + + P+   F  +I 
Sbjct: 454 AELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALIC 513

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+     +A+ +    ++    PNE+TY+ LI G+ +EG      +L  EM  K +SP
Sbjct: 514 GLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSP 573

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y  LI+ LC  G++ EA ++   +           Y +L+    ++G   +AL   
Sbjct: 574 DTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVAR 633

Query: 362 EEMVSEGLK 370
           +EMV  GL+
Sbjct: 634 QEMVGRGLQ 642



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 175/376 (46%), Gaps = 9/376 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            +VAF     + + G S ++ S+N++I+   K  +  +   +++ M++    P  AT  +
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTS 475

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LIS  CK G +     +   + GK  +P  +  T+LI  + Q  ++ E   L   M+   
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + + Y++++    +  N   A  + +EM+K+G S +++ Y   I   C  G++ EA 
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             + ++ +   +  +  +  L++G  K  RI+E+L   ++M+ R L     ++  +I   
Sbjct: 596 EFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLIS-- 653

Query: 244 CECGNAKQANGMLTLAL----DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
              G   Q + +L   L     KG  P+ + Y+ LI G+ K G +++  + +Y M  +  
Sbjct: 654 ---GALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGY 710

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    YT+L++ L + G + EA   FK M     +P    Y   +    ++GN   AL 
Sbjct: 711 VPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770

Query: 360 LCEEMVSEGLKPSTSY 375
           L   M+      + +Y
Sbjct: 771 LHNAMLQGSFANTVTY 786



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 150/318 (47%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T+  L++AL +  + +  +++ D +      P   + T ++  + + +   +   +
Sbjct: 188 PEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEI 247

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           + +          + Y++ +    K + +  A+ V   + ++G  A+   Y T +   C 
Sbjct: 248 INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCR 307

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             + E    +M EM   G  P +   + LIEG  K   IE +     ++    ++P+   
Sbjct: 308 IQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFV 367

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N MI  LC+ G  ++A  + ++  ++G +PN++TY+ LI G+ +  ++      + +M 
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMI 427

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              IS T+ +Y S+I+  C+ GK++ A+  FK M    L P V  Y SL+  + + G   
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487

Query: 356 KALHLCEEMVSEGLKPST 373
           KA  L  EM  +G+ P+T
Sbjct: 488 KAFKLYHEMTGKGIAPNT 505



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 162/351 (46%), Gaps = 2/351 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++N LI    +       + +   M++    P+  T R LI+ LC  G++    + ++ 
Sbjct: 541 VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIND 600

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +H K      +  T+L+    +E RI+E +V  + M+ + +  D ++Y++++   +  +N
Sbjct: 601 LHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALN-QN 659

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
                 +  EM  +G   ++ +YT  I  + + G +++A      M   G  P   T+  
Sbjct: 660 DRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTA 719

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+ G  KA  + E+    ++M+  + +P+   +   +  L + GN + A  +    L   
Sbjct: 720 LVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGS 779

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           F+ N +TY+ LI GY + G+ QE  KL   M    + P    Y++ I   C+ G ++ A 
Sbjct: 780 FA-NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAM 838

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             ++ M    L P   ++  L+      G   +AL L  +M+  GLKP+ S
Sbjct: 839 DMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQS 889



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 129/285 (45%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI   +Q +R+ +G++++  M    ++ +    S ++ A  ++R     L +++ ++  G
Sbjct: 161 LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAG 220

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + ++YT  +   CE     +A  ++ + E  G      T+N+ I G  K+KR+ E++
Sbjct: 221 VKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAV 280

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                +  + L      +  ++  LC     +    M+   ++ G+ P+E   S LI G 
Sbjct: 281 EVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGL 340

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K G I+   +L  ++    + P L  Y S+I+SLC+ GKLEEA+  F +M    L P  
Sbjct: 341 IKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPND 400

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCR 383
             Y  L+     +     A +   +M+  G+  +     S   C+
Sbjct: 401 VTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQ 445



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 4/272 (1%)

Query: 17  RGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           RG  + L+S+  LI   + ++DR  +++ + + M      P+      LI    K G L+
Sbjct: 639 RGLQMDLVSYAVLISGALNQNDR--ILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLK 696

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              +    + G+   P  +  T+L+  + +   + E  +L KRML    I + I Y   +
Sbjct: 697 KAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFL 756

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  N+E+AL ++  ML+  F AN+  Y   I  YC+ GK +EA  L+  M   G+ 
Sbjct: 757 DHLTKEGNMENALQLHNAMLQGSF-ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMV 815

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++  I    K   ++ ++   E M+ R L P    FN +I   C  G   +A  +
Sbjct: 816 PDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQL 875

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
               + +G  P + TY  L+   A+   + +V
Sbjct: 876 RNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/271 (18%), Positives = 113/271 (41%), Gaps = 19/271 (7%)

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALV------------------VYEEMLKRGFSA 161
           L +N  H T ++ +++++ ++      A                     +E   K  FS+
Sbjct: 95  LHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFESYKKYKFSS 154

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +S  +   I  Y +  ++ +   ++  M + GL P   T + L+   A+ ++  + L   
Sbjct: 155 SS-GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF 213

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + +++  + P C  +  +++ LCE  +  +A  ++  A   G S + +TY+  I G  K 
Sbjct: 214 DTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKS 273

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             + E +++   +  K +   L  Y +L+  LC+  + E   +    M     VP     
Sbjct: 274 KRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAV 333

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L+   ++ G+   A  L  ++   G+ P+
Sbjct: 334 SGLIEGLIKMGSIEGAFELLNKVGKLGVVPN 364


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 172/322 (53%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   LIS LC    LQ   ++LD++      P V +  +LI   +QE R E  + L
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           LK M+   ++ D   Y+ ++    + + +E A ++  +M ++G   N+  Y  FI  Y +
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+I+ A    ++M ++G+ P +  + +LI+G        E+LS  + M+ + L+P   A
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++ +I  L + G  K+A G+    L  G  P+   Y+ LI G+ KEG+I++  +LY EM 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
           +  I+P +  Y +LI+ LC+ G++ +A + F  ++   LVP V  Y +++  + + GN  
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLT 748

Query: 356 KALHLCEEMVSEGLKPSTSYLC 377
           +A  L +EM+S+G+ P     C
Sbjct: 749 EAFKLFDEMISKGISPDGYIYC 770



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 180/425 (42%), Gaps = 71/425 (16%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +LI  N L+  + K++   L W++Y  M+E    P+  T   +I A CK G +   
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  K C P +    + I  + Q   ++E + + K M+ K +  D   Y+L+V  
Sbjct: 262 KMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320

Query: 138 KVKMR-----------------------------------NLESALVVYEEMLKRGFSAN 162
             K +                                   N+E AL + +EM+ RG   N
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y   IG   + G++ +A  L  EM  AGL+P   T+NLLI+G  K+  + ++     
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M +RKL PS   ++ +I  LC   + ++AN +L   +  G  PN   Y  LI  Y +E 
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE--------------------- 321
             +  ++L   M    + P L  Y  LI  LC+  K+EE                     
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560

Query: 322 --------------ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
                         A++YFK M S  +VP   IY  L+  H + GN  +AL   + M+ +
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620

Query: 368 GLKPS 372
           GL P 
Sbjct: 621 GLIPD 625



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 175/370 (47%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E+A ++ + +   G    L  +N LI  + ++ + +    +   M E    PN  T   
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I+   K G++Q        +      P  ++ T LI          E +   K ML K 
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +I D  AYS I+++  K    + A+ V+ + LK G   + F+Y + I  +C+ G IE+A+
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM + G+ P    +N LI G  K   + ++    +++  + L+P    ++ +I   
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ GN  +A  +    + KG SP+   Y  LI G  KEG +++ L L++E + KS+  +L
Sbjct: 742 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SL 800

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            A+ SLI S C+ GK+ EA + F  M    L P +  Y  L+  + +     +A  L  +
Sbjct: 801 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860

Query: 364 MVSEGLKPST 373
           M +  + P+T
Sbjct: 861 METRNIIPNT 870



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 166/357 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  L+++++N +I  + K+        ++  ML     P+  T   LI    K   +  
Sbjct: 375 RGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAK 434

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             ++L  +  ++ +P     + LI  +     +++   +L +M+R  +  +   Y  ++ 
Sbjct: 435 ACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIK 494

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A V+    E A+ + + M+  G   + F Y   I   C   K+EEA  L+ +M   G+KP
Sbjct: 495 AYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+   I   +K+  I+ +  Y + M+S  ++P+   +  +I+  C+ GN  +A    
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L+KG  P+   YS +I   +K G+ +E + ++ +     + P +  Y SLIS  C+ 
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKE 674

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G +E+A + +  M  + + P + +Y +L+    + G   KA  L +E+  + L P  
Sbjct: 675 GDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDV 731



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 177/393 (45%), Gaps = 42/393 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           ++G   +  ++   I++ +KS    +  R ++ ML +   PN      LI   C  G   
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608

Query: 74  --LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             L T+  ML+    K   P +   +++I  + +  + +E M +  + L+  ++ D   Y
Sbjct: 609 EALSTFKCMLE----KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLY 664

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    K  ++E A  +Y+EML  G + N  VY T I   C+ G++ +A  L  E+E 
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEE 724

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-------------------- 231
             L P   T++ +I+G  K+  + E+    ++M+S+ + P                    
Sbjct: 725 KDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 784

Query: 232 --------------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
                         S SAFN +I   C+ G   +A  +    +DK  +PN +TY+ LI  
Sbjct: 785 ALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           Y K   ++E  +L+ +ME ++I P    YTSL+ S  Q G   +    FK M++  +   
Sbjct: 845 YGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACD 904

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              Y  +   + ++G   +AL L  + + EG+K
Sbjct: 905 AIAYGVMASAYCKEGKSLEALKLLNKSLVEGIK 937



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 162/367 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V + + ++G      ++  L+    K  R+     I++ M  +   PN  T   LI 
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALID 354

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G ++  + + D +  +     V+   ++I  I +   + + M L   ML   +  
Sbjct: 355 GFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEP 414

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT  Y+L++   +K  ++  A  +  EM  R  + + F Y+  I   C    +++AN ++
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   G+KP    +  LI+   +  R E ++   + M++  +LP    +N +I  LC  
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A  +L    +KG  PN  TY   I  Y+K GEIQ   + + +M    I P    Y
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY 594

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI   C  G   EA   FK M    L+P +  Y +++    + G   +A+ +  + + 
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654

Query: 367 EGLKPST 373
            G+ P  
Sbjct: 655 TGVVPDV 661



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 151/346 (43%), Gaps = 36/346 (10%)

Query: 26   FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
            +N+LI    K    +   ++Y  ML N   PN     TLI+ LCK G++    ++ D I 
Sbjct: 664  YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723

Query: 86   GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
             K   P V+  +++I    +   + E   L   M+ K +  D   Y +++    K  NLE
Sbjct: 724  EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 783

Query: 146  SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
             AL ++ E  ++   + S  + + I ++C++GK+ EA  L  +M +  L P   T+ +LI
Sbjct: 784  KALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 842

Query: 206  EGCAKAKRIEESLSYCEQMMSRKLLPSC--------------------SAFNEMIRR--- 242
            +   KA+ +EE+      M +R ++P+                     S F +M  R   
Sbjct: 843  DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIA 902

Query: 243  ------------LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
                         C+ G + +A  +L  +L +G    +  +  LI    KE +I  VL+L
Sbjct: 903  CDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLEL 962

Query: 291  YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              EM  + +S +     +L+    + G  +EA K   +M+    VP
Sbjct: 963  LSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 59   ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            +   +LI + CK G++    ++ D +  K+ +P ++  T LI    + E +EE   L   
Sbjct: 801  SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860

Query: 119  MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
            M  +N+I +T+ Y+ ++ +  ++ N    + ++++M  RG + ++  Y     AYC+ GK
Sbjct: 861  METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 920

Query: 179  IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
              EA  L+ +    G+K  D+ F+ LI    K K+I   L    +M   +L  S    N 
Sbjct: 921  SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNT 980

Query: 239  MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI--GGYAKEGEIQEVL 288
            ++    + GN  +A+ +L +    G+ P  ++ +  I  G    + +I +VL
Sbjct: 981  LLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMKSDISQVL 1032



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 36/224 (16%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           VY  M++     + + YT  I A+C+ G + +   ++ EME                   
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME------------------- 269

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
                            ++  P+   +N  I  LC+ G   +A  +  L ++KG  P+  
Sbjct: 270 -----------------KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGH 312

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ L+ G+ K+   +E   ++  M    ++P    YT+LI    + G +EEA +    M
Sbjct: 313 TYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  L   V  Y +++G   + G  AKA+ L  EM+  GL+P T
Sbjct: 373 ITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 1/139 (0%)

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           + F+  I +    G   +A+ +   ++ +GF P  I  ++L+    K   +    K+Y  
Sbjct: 173 TVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGS 232

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    I P +  YT++I + C+ G + +       M+     P +  Y + +G   + G 
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGA 291

Query: 354 KAKALHLCEEMVSEGLKPS 372
             +AL + + M+ +GL P 
Sbjct: 292 VDEALEVKKLMMEKGLGPD 310


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 182/359 (50%), Gaps = 1/359 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ RG     ++F   I   +K+ +     + +  ML++   PN      LI+   K G 
Sbjct: 534 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 593

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   + +  R+H     P V   ++ I  +++  R++E + +   +  K ++ D   YS 
Sbjct: 594 LMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 653

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E A  +++EM  +G + N F+Y   +   C+ G I+ A  L   M   G
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P   T++ +I+G  K++ + E+ S   +M S+ + P    +N ++   C+ G+ ++A 
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 773

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L KGF+   ++++ LI GY K  +IQE  +L+ EM  K I P    YT++I   
Sbjct: 774 NLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 832

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ GK+EEA+  FK M+  +L+     Y SL+  + + G  ++   L E+MV++G+KP 
Sbjct: 833 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 891



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 182/408 (44%), Gaps = 35/408 (8%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M + + A +V    +     +SLI  N+L+  + K    +L W++Y  ML+     +  T
Sbjct: 171 MGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYT 230

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+ ALCK G L+    +L  +  K  +P   + + +I  + Q   I+E + L + M 
Sbjct: 231 YTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMG 290

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA------------------- 161
            K ++ +T  Y++I     + + +  A + +EEM K G                      
Sbjct: 291 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 350

Query: 162 ----------------NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
                           N   Y   I   C++GK+E+A  +++ M   G KP   TF LLI
Sbjct: 351 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLI 410

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           EG  +   +  +L   ++M  R L+PS  ++  MI  LC C +   AN +L      G  
Sbjct: 411 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 470

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN + YS LI  YA EG I+E  +L   M    ++P +  Y ++IS L + GK+EEA  Y
Sbjct: 471 PNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 530

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              ++   L P    + + +  + + G   +A    +EM+  GL P+ 
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 578



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 182/394 (46%), Gaps = 41/394 (10%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++LI++N LIH + K  + +    I + M+     PN  T   LI   C+   +   
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRA 422

Query: 78  VDMLDRI--------------------HGKRCS---------------PMVIVNTSLILR 102
           +++LD +                    H K  S               P V+V + LI+ 
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMA 482

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
              E RIEE   LL  M    +  D   Y+ I+    K   +E A     E+  RG   +
Sbjct: 483 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 542

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           +  +  FI  Y + GK+ EA     EM + GL P +  + +LI G  KA  + E+LS   
Sbjct: 543 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 602

Query: 223 QMMSRKLLP---SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           ++ +  +LP   +CSAF   I  L + G  ++A  + +   +KG  P+  TYS LI G+ 
Sbjct: 603 RLHALGVLPDVQTCSAF---IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 659

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+GE+++  +L+ EM  K I+P +  Y +L+  LC+ G ++ A K F  M    L P   
Sbjct: 660 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Y +++  + +  N A+A  L  EM S+G++P +
Sbjct: 720 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 753



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 177/366 (48%), Gaps = 1/366 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R L   G    + + +  IH + K+ R     +++  + E    P+  T  +LIS
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+++   ++ D +  K  +P + +  +L+  + +   I+    L   M  K +  
Sbjct: 657 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 716

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D++ YS ++    K  N+  A  ++ EM  +G   +SFVY   +   C+ G +E+A  L 
Sbjct: 717 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 776

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G      +FN LI+G  K+ +I+E+    ++M++++++P    +  +I   C+ 
Sbjct: 777 REMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 835

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++AN +     ++    + +TY+ L+ GY K G+  EV  L+ +M  K + P    Y
Sbjct: 836 GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTY 895

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I + C+   L EA K    +    ++    I++ L+    ++ +  +A  L +EM  
Sbjct: 896 GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 955

Query: 367 EGLKPS 372
            GLKPS
Sbjct: 956 LGLKPS 961



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 170/370 (45%), Gaps = 1/370 (0%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A  V   L+++G    + ++++LI    K    +  + ++  M      PN      L+ 
Sbjct: 632  ALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD 691

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             LCK G +Q    + D +  K   P  +  +++I    + E + E   L   M  K +  
Sbjct: 692  GLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 751

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             +  Y+ +V+   K  ++E A+ ++ EML++GF A +  + T I  YC+  KI+EA+ L 
Sbjct: 752  HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLF 810

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            QEM    + P   T+  +I+   KA ++EE+    ++M  R L+     +  ++    + 
Sbjct: 811  QEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL 870

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            G + +   +    + KG  P+E+TY  +I  + KE  + E  KL  E+  K +      +
Sbjct: 871  GQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIH 930

Query: 307  TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
              LI++LC+   L EA K    M    L P +    +LV    E G   +A  + E + S
Sbjct: 931  DLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKS 990

Query: 367  EGLKPSTSYL 376
             GL P T+ L
Sbjct: 991  LGLVPDTTTL 1000



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 169/369 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E+R    S +S+  +I+ +       L  ++ + M  +   PN      LI 
Sbjct: 422 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIM 481

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A    G+++    +LD +     +P +    ++I  + +  ++EE    L  +  + +  
Sbjct: 482 AYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 541

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + +   +    K   +  A   ++EML  G   N+ +YT  I  + + G + EA  + 
Sbjct: 542 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 601

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + +   G+ P  +T +  I G  K  R++E+L    ++  + L+P    ++ +I   C+ 
Sbjct: 602 RRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 661

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +      KG +PN   Y+ L+ G  K G+IQ   KL+  M  K + P    Y
Sbjct: 662 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 721

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +++I   C+   + EA   F  M S  + P   +Y +LV    ++G+  KA++L  EM+ 
Sbjct: 722 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 781

Query: 367 EGLKPSTSY 375
           +G   + S+
Sbjct: 782 KGFATTLSF 790



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 162/355 (45%), Gaps = 1/355 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +++ ++ LI       R +   R+   M  +   P+      +IS L K G+++  
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
              L  I G+   P  +   + IL   +  ++ E       ML   ++ +   Y++++  
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  NL  AL ++  +   G   +    + FI    + G+++EA  +  E++  GL P 
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ LI G  K   +E++    ++M  + + P+   +N ++  LC+ G+ ++A  +  
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG  P+ +TYS +I GY K   + E   L++EM  K + P    Y +L+   C+ G
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +E+A   F+ M        +  + +L+  + +     +A  L +EM+++ + P 
Sbjct: 768 DMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 821



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 168/361 (46%), Gaps = 1/361 (0%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E AF++   +  +G + ++  +N L+  + KS       +++  M E    P+  T  T+
Sbjct: 665  EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 724

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            I   CK   +     +   +  K   P   V  +L+    +E  +E+ M L + ML+K  
Sbjct: 725  IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG- 783

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               T++++ ++    K   ++ A  +++EM+ +    +   YTT I  +C+ GK+EEAN 
Sbjct: 784  FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            L +EM+   L     T+  L+ G  K  +  E  +  E+M+++ + P    +  +I   C
Sbjct: 844  LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
            +  N  +A  +    + KG       +  LI    K  ++ E  KL  EM    + P+L 
Sbjct: 904  KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 963

Query: 305  AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            A  +L+ S  + GK++EA + F+ +KS  LVP       LV  +L   +   A +L +++
Sbjct: 964  ACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023

Query: 365  V 365
            V
Sbjct: 1024 V 1024



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G SP  + +  LI  Y + G + E   +++  +  SI  +L    SL+  L +CG +E  
Sbjct: 155 GSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELF 212

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            K +  M    +   V  Y  LVG   + G+   A  +  EM  +GL P+
Sbjct: 213 WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPN 262


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 189/368 (51%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  + + + + G S ++ ++N LI     +   ++    +  M  N   PN  T  T+
Sbjct: 185 KIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTI 244

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A CK  ++     +L  +  K  +P +I    +I  + +E +++E   +L+ M ++  
Sbjct: 245 IDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRY 304

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + ++ ++     + N   ALV++ EM+K G S N   YTT I + C+ G +  A  
Sbjct: 305 VPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME 364

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            + +M + GL P   T+  LI+G ++   ++++    ++M+     P+   +N +I   C
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHC 424

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A+G+L   +++GF P+ ++YS +I G+ +  E+++  +L  EM  K ISP + 
Sbjct: 425 ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+SLI  LC+  +L E    F+ M S  L P    Y SL+  +  +G+  KAL L +EM
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEM 544

Query: 365 VSEGLKPS 372
           + +G  P 
Sbjct: 545 IQKGFSPD 552



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 177/377 (46%), Gaps = 21/377 (5%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           RY+  R      ++FNTLI+             ++  M++N   PN  T  TLI+++CK 
Sbjct: 303 RYVPDR------VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L   ++ LD++  +   P     T+LI    Q+  +++   ++K M+        I Y
Sbjct: 357 GNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++     +  +E A  + +EM++RGF  +   Y+T I  +C   ++E+A  L  EM  
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T++ LI+G  K +R+ E     ++M+S  L P    +  +I   C  G+  +
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDK 536

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    + KGFSP+ +TY+ LI G+ K+   +E  +L  ++ Y+   P    Y +LI 
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596

Query: 312 S---------------LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           +                C  G + EAD+  + M         ++Y  ++  H + GN  K
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656

Query: 357 ALHLCEEMVSEGLKPST 373
           A +L +EM+  G  P +
Sbjct: 657 AYNLYKEMLHSGFAPHS 673



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 160/375 (42%), Gaps = 36/375 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLENIRYPNEA 59
           + L   A  +    +  GF   ++S+N ++  V ++ ++  +   I++ M+E+   PN  
Sbjct: 145 VNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVY 204

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T   LI   C  G L                                   E G+     M
Sbjct: 205 TYNILIRGFCTAGNL-----------------------------------EMGLXFFGEM 229

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            R   + + + Y+ I+ A  K+R +  A  +   M  +G + N   Y   I   C  G++
Sbjct: 230 ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQM 289

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +E + +++EM      P   TFN LI G        ++L    +M+   L P+   +  +
Sbjct: 290 KETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  +C+ GN  +A   L    D+G  PN  TY+ LI G++++G +++  ++  EM     
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +PT+  Y +LI+  C  G++E+A    + M     +P V  Y +++          KA  
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 360 LCEEMVSEGLKPSTS 374
           L  EMV++G+ P  +
Sbjct: 470 LKVEMVAKGISPDVA 484



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 160/332 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++NT+I    K  +    +++ + M      PN  +   +I+ LC+ GQ
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++L+ +  +R  P  +   +LI          + +VL   M++  +  + + Y+ 
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ +  K  NL  A+   ++M  RG   N   YTT I  + + G +++A  +M+EM   G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N LI G     R+E++    ++M+ R  +P   +++ +I   C     ++A 
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    + KG SP+  TYS LI G  K+  + EV  L+ EM    + P    YTSLI++ 
Sbjct: 469 QLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAY 528

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           C  G L++A +    M      P +  Y  L+
Sbjct: 529 CIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 163/339 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + R +  +G + +LIS+N +I+ + +  +      I + M +    P+  T  TLI+
Sbjct: 257 AFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G     + +   +     SP V+  T+LI  + +   +   M  L +M  + +  
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP 376

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ ++    +   L+ A  + +EM++ GF+     Y   I  +C  G++E+A+ L+
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM   G  P   +++ +I G  + + +E++     +M+++ + P  + ++ +I+ LC+ 
Sbjct: 437 QEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ 496

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +   +    L  G  P+E+TY+ LI  Y  EG++ + L+L+ EM  K  SP +  Y
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY 556

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             LI+   +  + +EA +    +     VP    Y +L+
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 172/383 (44%), Gaps = 15/383 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +    +  RG   +  ++ TLI   ++       ++I + M+EN   P   T   LI+
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+++    +L  +  +   P V+  +++I    + + +E+   L   M+ K +  
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   YS ++    K R L     +++EML  G   +   YT+ I AYC  G +++A  L 
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI------ 240
            EM   G  P   T+N+LI G  K  R +E+     +++  + +P+   +N +I      
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNL 601

Query: 241 ---------RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
                    +  C  G   +A+ +L   L KG+  NE  Y+ +I G++K G I++   LY
Sbjct: 602 EFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLY 661

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            EM +   +P      +L  SL   GK  E ++          +    + + L+GI+ ++
Sbjct: 662 KEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKE 721

Query: 352 GNKAKALHLCEEMVSEGLKPSTS 374
           GN     ++ ++M   GL P +S
Sbjct: 722 GNMDAVFNVLKDMALSGLLPYSS 744



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 36/215 (16%)

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYC--------------------------------- 221
           K     F+L+++ CA+   I ++LS                                   
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 222 ---EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              ++M+   + P+   +N +IR  C  GN +            G  PN +TY+ +I  Y
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K  +I E  KL   M  K ++P L +Y  +I+ LC+ G+++E  +  + M     VP  
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + +L+  +   GN  +AL L  EMV  GL P+ 
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 186/359 (51%), Gaps = 2/359 (0%)

Query: 26  FNTLIHV-VTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           FN+++   +  + R D+V R+ + M+     PN+A +   I  LCK G+ +   ++   +
Sbjct: 394 FNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLV 453

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
            GK     +  + +LI  + Q   ++E   +LK M+   +  D I Y++++    K   +
Sbjct: 454 LGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKM 513

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A+ + ++M+KRGF  + F + TF+ AYC  GK+E+   L+ +M++ GLKP   T+  +
Sbjct: 514 EEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTI 573

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  KAK + ++  Y  +++   L P+   +N +I      G+   A G+L      G 
Sbjct: 574 IDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGI 633

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  ITY+ L+      G ++E  +++ +   K+I   +  YT +I   C+ GK++EA  
Sbjct: 634 QPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVM 693

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLCSASTC 382
           YFK M    + P    Y +L+  + + GNK +A  L +EMVS G+ P T SY    S C
Sbjct: 694 YFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGC 752



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 173/371 (46%), Gaps = 1/371 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + AF +   LE+ G   +++++N L+  + +S R +  +++   M+E    P+  T   
Sbjct: 232 IDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGI 291

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ L +G +      +L  + G   +P  ++   LI    +E    E + L   M+ K 
Sbjct: 292 LINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKG 351

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE-YGKIEEA 182
           +    + Y+LI  A  K   +E A  + +EML  G + +  ++ + +  +    G+++  
Sbjct: 352 IKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVV 411

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++EM    LKP D      I+   K  + EE+      ++ + L  + +  N +I  
Sbjct: 412 LRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHG 471

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+  N K+A  +L   +D G   + ITY+ +I    K  +++E ++L  +M  +   P 
Sbjct: 472 LCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPD 531

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           L  + + + + C  GK+E+       MKS  L P +  Y +++  + +  +  KA     
Sbjct: 532 LFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLI 591

Query: 363 EMVSEGLKPST 373
           E++  GL+P+ 
Sbjct: 592 ELIKNGLRPNA 602



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 163/403 (40%), Gaps = 37/403 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLI 65
           A D    L  RG S S+ + N L+  +    + DL  +++  M + N   P+  T   +I
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI 223

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            ALC+ G++     ML  +      P V+    L+  + +  R+EE   L  RM+   + 
Sbjct: 224 KALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLR 283

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + + +++    + +       V +EM   G + N  +Y   IG +C  G   EA  L
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRL 343

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN-------- 237
             EM + G+K    T+NL+ +   K   +E +    ++M+   +   CS FN        
Sbjct: 344 FDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLR 403

Query: 238 -------------EMIRR---------------LCECGNAKQANGMLTLALDKGFSPNEI 269
                        EM+ R               LC+ G  ++A  +  L L KG   N  
Sbjct: 404 GTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIA 463

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           T + LI G  +   ++E  K+   M    +      Y  +I   C+  K+EEA +    M
Sbjct: 464 TSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDM 523

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 P +  + + +  +   G     LHL ++M SEGLKP 
Sbjct: 524 IKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPD 566



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 121/238 (50%), Gaps = 2/238 (0%)

Query: 143 NLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            L+ A  V+ EM      + + + YT  I A C  G+I+ A  ++ E+E +G++P   T+
Sbjct: 195 QLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTY 254

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L++   ++ R+EE+     +M+  +L PS   F  +I  L       + + +L     
Sbjct: 255 NVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEG 314

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G +PNE+ Y+ LIG + +EG   E L+L+ EM  K I  T+  Y  +  +LC+ G++E 
Sbjct: 315 FGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 374

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLE-KGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A++    M    +     ++ S+V  HL   G     L L  EMV+  LKP+ + + +
Sbjct: 375 AEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTA 432



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/293 (18%), Positives = 136/293 (46%), Gaps = 10/293 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V + +   G     I++N +I    K+ + +   ++   M++    P+  T  T + 
Sbjct: 481 ATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLR 540

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C  G+++  + +LD++  +   P ++   ++I    + + + +    L  +++  +  
Sbjct: 541 AYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRP 600

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE----- 181
           + + Y+ ++    +  ++  A+ V + M   G       Y + +   C  G +EE     
Sbjct: 601 NAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIF 660

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A C+++ +E   +      + ++I+G  K  +I+E++ Y ++M  R + P+   +  ++ 
Sbjct: 661 AQCILKNIELGVIG-----YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMY 715

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             C+CGN ++A  +    +  G  P+ ++Y+ LI G  +   + ++++   EM
Sbjct: 716 AYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D+   L+Q    G    ++++ T+I    K+       +    +++N   PN      LI
Sbjct: 550 DILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALI 609

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
               + G +   + +LD +      P  I   SL+  +     +EE   +  + + KN+ 
Sbjct: 610 GGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIE 669

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              I Y++I+    K+  ++ A++ ++EM  R    N   YTT + AYC+ G  EEA  L
Sbjct: 670 LGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKL 729

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
             EM ++G+ P   ++N LI GC +   +++ +    +M S
Sbjct: 730 FDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 189/368 (51%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  + + + + G S ++ ++N LI     +   ++    +  M  N   PN  T  T+
Sbjct: 185 KIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTI 244

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A CK  ++     +L  +  K  +P +I    +I  + +E +++E   +L+ M ++  
Sbjct: 245 IDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRY 304

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + ++ ++     + N   ALV++ EM+K G S N   YTT I + C+ G +  A  
Sbjct: 305 VPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME 364

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            + +M + GL P   T+  LI+G ++   ++++    ++M+     P+   +N +I   C
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHC 424

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A+G+L   +++GF P+ ++YS +I G+ +  E+++  +L  EM  K ISP + 
Sbjct: 425 ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+SLI  LC+  +L E    F+ M S  L P    Y SL+  +  +G+  KAL L +EM
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEM 544

Query: 365 VSEGLKPS 372
           + +G  P 
Sbjct: 545 IQKGFSPD 552



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 177/377 (46%), Gaps = 21/377 (5%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           RY+  R      ++FNTLI+             ++  M++N   PN  T  TLI+++CK 
Sbjct: 303 RYVPDR------VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L   ++ LD++  +   P     T+LI    Q+  +++   ++K M+        I Y
Sbjct: 357 GNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++     +  +E A  + +EM++RGF  +   Y+T I  +C   ++E+A  L  EM  
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T++ LI+G  K +R+ E     ++M+S  L P    +  +I   C  G+  +
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDK 536

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    + KGFSP+ +TY+ LI G+ K+   +E  +L  ++ Y+   P    Y +LI 
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596

Query: 312 S---------------LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           +                C  G + EAD+  + M         ++Y  ++  H + GN  K
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656

Query: 357 ALHLCEEMVSEGLKPST 373
           A +L +EM+  G  P +
Sbjct: 657 AYNLYKEMLHSGFAPHS 673



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 160/375 (42%), Gaps = 36/375 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLENIRYPNEA 59
           + L   A  +    +  GF   ++S+N ++  V ++ ++  +   I++ M+E+   PN  
Sbjct: 145 VNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVY 204

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T   LI   C  G L                                   E G+     M
Sbjct: 205 TYNILIRGFCTAGNL-----------------------------------EMGLFFFGEM 229

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            R   + + + Y+ I+ A  K+R +  A  +   M  +G + N   Y   I   C  G++
Sbjct: 230 ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQM 289

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +E + +++EM      P   TFN LI G        ++L    +M+   L P+   +  +
Sbjct: 290 KETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL 349

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  +C+ GN  +A   L    D+G  PN  TY+ LI G++++G +++  ++  EM     
Sbjct: 350 INSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +PT+  Y +LI+  C  G++E+A    + M     +P V  Y +++          KA  
Sbjct: 410 TPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQ 469

Query: 360 LCEEMVSEGLKPSTS 374
           L  EMV++G+ P  +
Sbjct: 470 LKVEMVAKGISPDVA 484



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 160/332 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++NT+I    K  +    +++ + M      PN  +   +I+ LC+ GQ
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++L+ +  +R  P  +   +LI          + +VL   M++  +  + + Y+ 
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ +  K  NL  A+   ++M  RG   N   YTT I  + + G +++A  +M+EM   G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N LI G     R+E++    ++M+ R  +P   +++ +I   C     ++A 
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    + KG SP+  TYS LI G  K+  + EV  L+ EM    + P    YTSLI++ 
Sbjct: 469 QLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAY 528

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           C  G L++A +    M      P +  Y  L+
Sbjct: 529 CIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 163/339 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + R +  +G + +LIS+N +I+ + +  +      I + M +    P+  T  TLI+
Sbjct: 257 AFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLIN 316

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G     + +   +     SP V+  T+LI  + +   +   M  L +M  + +  
Sbjct: 317 GYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHP 376

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ ++    +   L+ A  + +EM++ GF+     Y   I  +C  G++E+A+ L+
Sbjct: 377 NGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL 436

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM   G  P   +++ +I G  + + +E++     +M+++ + P  + ++ +I+ LC+ 
Sbjct: 437 QEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQ 496

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +   +    L  G  P+E+TY+ LI  Y  EG++ + L+L+ EM  K  SP +  Y
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY 556

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             LI+   +  + +EA +    +     VP    Y +L+
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 172/383 (44%), Gaps = 15/383 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +    +  RG   +  ++ TLI   ++       ++I + M+EN   P   T   LI+
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+++    +L  +  +   P V+  +++I    + + +E+   L   M+ K +  
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   YS ++    K R L     +++EML  G   +   YT+ I AYC  G +++A  L 
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI------ 240
            EM   G  P   T+N+LI G  K  R +E+     +++  + +P+   +N +I      
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNL 601

Query: 241 ---------RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
                    +  C  G   +A+ +L   L KG+  NE  Y+ +I G++K G I++   LY
Sbjct: 602 EFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLY 661

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            EM +   +P      +L  SL   GK  E ++          +    + + L+GI+ ++
Sbjct: 662 KEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKE 721

Query: 352 GNKAKALHLCEEMVSEGLKPSTS 374
           GN     ++ ++M   GL P +S
Sbjct: 722 GNMDAVFNVLKDMALSGLLPYSS 744



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 36/215 (16%)

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYC--------------------------------- 221
           K     F+L+++ CA+   I ++LS                                   
Sbjct: 129 KSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAE 188

Query: 222 ---EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              ++M+   + P+   +N +IR  C  GN +            G  PN +TY+ +I  Y
Sbjct: 189 GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAY 248

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K  +I E  KL   M  K ++P L +Y  +I+ LC+ G+++E  +  + M     VP  
Sbjct: 249 CKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + +L+  +   GN  +AL L  EMV  GL P+ 
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 171/349 (48%), Gaps = 3/349 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRT 63
           A DV   ++  GF  +++++NTLI    K  R   +++   I + M+EN   PN  T   
Sbjct: 249 AGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNV 308

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK   L   + + + +  +   P V+   SL+  +  E ++ E  VLL  ML  N
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I Y+ ++    K + LE A  +++ + K+G + N   + T +  YC++GK+EEA 
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L + M   G  P   T+N LI G  +  ++EE  +   +M  R +      +N +I   
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           CE    K+A  ++   LDKG  P+ +TY+ L+ GY  EG ++  L L  +ME +     +
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
             Y  LI   C+ GKLE+A+     M    L+P    YE +    +EKG
Sbjct: 549 VTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 182/353 (51%), Gaps = 3/353 (0%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           + LS++S N L+  + K +    V  +Y+ M+     PN  T  T+I+ LCK G+L    
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250

Query: 79  DMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           D++D +      P V+   +LI    ++ +  ++ +   +LK M+   +  +++ +++++
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLI 310

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  NL +AL V+EEM  +G       Y + +   C  GK+ EA  L+ EM ++ LK
Sbjct: 311 DGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLK 370

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  K K +EE+    + +  + L P+   FN ++   C+ G  ++A  +
Sbjct: 371 PNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL 430

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             + L+KGF PN  TY+ LI G+ +EG+++EV  L  EM+ + +      Y  LIS+ C+
Sbjct: 431 QKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCE 490

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             + ++A +    M    L P    Y  L+  +  +GN   AL+L ++M  EG
Sbjct: 491 KKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 3/280 (1%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             L+  +++E        + K M+R+ +  + I ++ ++    K+  L  A  V ++M  
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258

Query: 157 RGFSANSFVYTTFIGAYCE---YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
            GF  N   Y T I  YC+    GK+ +A+ +++EM    + P   TFN+LI+G  K + 
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           +  +L   E+M S+ L P+   +N ++  LC  G   +A  +L   L     PN ITY+ 
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI GY K+  ++E  +L+  +  + ++P +  + +L+   C+ GK+EEA    K+M    
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +P    Y  L+     +G   +  +L  EM   G+K  T
Sbjct: 439 FLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 104/205 (50%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           +L E A ++   + ++G + ++I+FNTL+H   K  + +  + + + MLE    PN +T 
Sbjct: 387 KLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTY 446

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C+ G+++   ++L+ +  +      +    LI    +++  ++   L+  ML 
Sbjct: 447 NCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLD 506

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +    + Y++++       NL +AL + ++M K G  AN   Y   I  YC  GK+E+
Sbjct: 507 KGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLED 566

Query: 182 ANCLMQEMENAGLKPYDETFNLLIE 206
           AN L+ EM   GL P   T+ ++ E
Sbjct: 567 ANGLLNEMLEKGLIPNRTTYEIIKE 591


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 181/359 (50%), Gaps = 1/359 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ RG     ++F   I   +K+ +     + +  ML++   PN      LI+   K G 
Sbjct: 445 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 504

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   + +   +H     P V   ++ I  +++  R++E + +   +  K ++ D   YS 
Sbjct: 505 LMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 564

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E A  +++EM  +G + N F+Y   +   C+ G I+ A  L   M   G
Sbjct: 565 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P   T++ +I+G  K++ + E+ S   +M S+ + P    +N ++   C+ G+ ++A 
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L KGF+   ++++ LI GY K  +IQE  +L+ EM  K I P    YT++I   
Sbjct: 685 NLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 743

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ GK+EEA+  FK M+  +L+     Y SL+  + + G  ++   L E+MV++G+KP 
Sbjct: 744 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD 802



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 182/394 (46%), Gaps = 41/394 (10%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++LI++N LIH + K  + +    I + M+     PN  T   LI   C+   +   
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 333

Query: 78  VDMLDRI--------------------HGKRCS---------------PMVIVNTSLILR 102
           +++LD +                    H K  S               P V+V ++LI+ 
Sbjct: 334 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 393

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
              E RIEE   LL  M    +  D   Y+ I+    K   +E A     E+  RG   +
Sbjct: 394 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 453

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           +  +  FI  Y + GK+ EA     EM + GL P +  + +LI G  KA  + E+LS   
Sbjct: 454 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 513

Query: 223 QMMSRKLLP---SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
            + +  +LP   +CSAF   I  L + G  ++A  + +   +KG  P+  TYS LI G+ 
Sbjct: 514 HLHALGVLPDVQTCSAF---IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 570

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+GE+++  +L+ EM  K I+P +  Y +L+  LC+ G ++ A K F  M    L P   
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Y +++  + +  N A+A  L  EM S+G++P +
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 664



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 178/366 (48%), Gaps = 1/366 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R+L   G    + + +  IH + K+ R     +++  + E    P+  T  +LIS
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 567

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+++   ++ D +  K  +P + +  +L+  + +   I+    L   M  K +  
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 627

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D++ YS ++    K  N+  A  ++ EM  +G   +SFVY   +   C+ G +E+A  L 
Sbjct: 628 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 687

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G      +FN LI+G  K+ +I+E+    ++M++++++P    +  +I   C+ 
Sbjct: 688 REMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 746

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++AN +     ++    + +TY+ L+ GY K G+  EV  L+ +M  K + P    Y
Sbjct: 747 GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTY 806

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I + C+   L EA K    +    ++    I++ L+    ++ +  +A  L +EM  
Sbjct: 807 GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 866

Query: 367 EGLKPS 372
            GLKPS
Sbjct: 867 LGLKPS 872



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P     T +   + + +R+ E  +  + M +  +  D  A S ++   ++  +++  L +
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
            + M+  G   N   Y   I   C++GK+E+A  +++ M   G KP   TF LLIEG  +
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              +  +L   ++M  R L+PS  ++  MI  LC C +   AN +L      G  PN + 
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           YS LI GYA EG I+E  +L   M    ++P +  Y ++IS L + GK+EEA  Y   ++
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              L P    + + +  + + G   +A    +EM+  GL P+ 
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 489



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 170/370 (45%), Gaps = 1/370 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   L+++G    + ++++LI    K    +  + ++  M      PN      L+ 
Sbjct: 543 ALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD 602

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G +Q    + D +  K   P  +  +++I    + E + E   L   M  K +  
Sbjct: 603 GLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 662

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            +  Y+ +V+   K  ++E A+ ++ EML++GF A +  + T I  YC+  KI+EA+ L 
Sbjct: 663 HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLF 721

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM    + P   T+  +I+   KA ++EE+    ++M  R L+     +  ++    + 
Sbjct: 722 QEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL 781

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G + +   +    + KG  P+E+TY  +I  + KE  + E  KL  E+  K +      +
Sbjct: 782 GQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIH 841

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI++LC+   L EA K    M    L P +    +LV    E G   +A  + E + S
Sbjct: 842 DLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKS 901

Query: 367 EGLKPSTSYL 376
            GL P T+ L
Sbjct: 902 LGLVPDTTTL 911



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 169/369 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E+R    S +S+  +I+ +       L  ++ + M  +   PN     TLI 
Sbjct: 333 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 392

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G+++    +LD +     +P +    ++I  + +  ++EE    L  +  + +  
Sbjct: 393 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 452

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + +   +    K   +  A   ++EML  G   N+ +YT  I  + + G + EA  + 
Sbjct: 453 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 512

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + +   G+ P  +T +  I G  K  R++E+L    ++  + L+P    ++ +I   C+ 
Sbjct: 513 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 572

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +      KG +PN   Y+ L+ G  K G+IQ   KL+  M  K + P    Y
Sbjct: 573 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 632

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +++I   C+   + EA   F  M S  + P   +Y +LV    ++G+  KA++L  EM+ 
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 692

Query: 367 EGLKPSTSY 375
           +G   + S+
Sbjct: 693 KGFATTLSF 701



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 163/355 (45%), Gaps = 1/355 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +++ ++TLI       R +   R+   M  +   P+      +IS L K G+++  
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
              L  I G+   P  +   + IL   +  ++ E       ML   ++ +   Y++++  
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  NL  AL ++  +   G   +    + FI    + G+++EA  +  E++  GL P 
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ LI G  K   +E++    ++M  + + P+   +N ++  LC+ G+ ++A  +  
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG  P+ +TYS +I GY K   + E   L++EM  K + P    Y +L+   C+ G
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +E+A   F+ M        +  + +L+  + +     +A  L +EM+++ + P 
Sbjct: 679 DMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 169/361 (46%), Gaps = 1/361 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF++   +  +G + ++  +N L+  + KS       +++  M E    P+  T  T+
Sbjct: 576 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 635

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK   +     +   +  K   P   V  +L+    +E  +E+ M L + ML+K  
Sbjct: 636 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 695

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              T++++ ++    K   ++ A  +++EM+ +    +   YTT I  +C+ GK+EEAN 
Sbjct: 696 A-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 754

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM+   L     T+  L+ G  K  +  E  +  E+M+++ + P    +  +I   C
Sbjct: 755 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 814

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  N  +A  +    + KG       +  LI    K  ++ E  KL  EM    + P+L 
Sbjct: 815 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 874

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A ++L+ S  + GK++EA + F+ +KS  LVP       LV  +L   +   A +L +++
Sbjct: 875 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934

Query: 365 V 365
           V
Sbjct: 935 V 935



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 109/219 (49%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M ++G   N++ YT      C   ++ EA    +EM+  GLKP     + LI+G  +   
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           I+E L   + M+S  +  +   +N +I  LC+ G  ++A  +L   +  G  PN  T+  
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI GY +E  +   L+L  EME +++ P+  +Y ++I+ LC C  L  A+K  + M    
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L P V +Y +L+  +  +G   +A  L + M   G+ P 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPD 418


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 183/373 (49%), Gaps = 1/373 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLENIRYPNEA 59
           + L + A  +    +  GF   ++S+N ++    +S RN      +++ MLE+   PN  
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVF 206

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T   LI   C  G +   + + D++  K C P V+   +LI    +  +I++G  LL+ M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             K +  + I+Y++++    +   ++    V  EM +RG+S +   Y T I  YC+ G  
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            +A  +  EM   GL P   T+  LI    KA  +  ++ + +QM  R L P+   +  +
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           +    + G   +A  +L    D GFSP+ +TY+ LI G+   G++++ + +  +M+ K +
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           SP + +Y++++S  C+   ++EA +  + M    + P    Y SL+    E+    +A  
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 360 LCEEMVSEGLKPS 372
           L EEM+  GL P 
Sbjct: 507 LYEEMLRVGLPPD 519



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 183/390 (46%), Gaps = 30/390 (7%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ EV+F V   + +RG+SL  +++NTLI    K         ++  ML +   P+  T 
Sbjct: 290 RMKEVSF-VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI ++CK G +   ++ LD++  +   P     T+L+    Q+  + E   +L+ M  
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                  + Y+ ++        +E A+ V E+M ++G S +   Y+T +  +C    ++E
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + +EM   G+KP   T++ LI+G  + +R +E+    E+M+   L P    +  +I 
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE----VLKLYYE---- 293
             C  G+ ++A  +    ++KG  P+ +TYS LI G  K+   +E    +LKL+YE    
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588

Query: 294 --------------MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
                         +E+KS+        SLI   C  G + EAD+ F+ M   +  P   
Sbjct: 589 SDVTYHTLIENCSNIEFKSV-------VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            Y  ++  H   G+  KA  L +EMV  G 
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 168/342 (49%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA  +   +E +G   +++++NTLI    K  + D  +++ + M      PN  +   +
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LC+ G+++    +L  ++ +  S   +   +LI    +E    + +V+   MLR  +
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               I Y+ ++++  K  N+  A+   ++M  RG   N   YTT +  + + G + EA  
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++EM + G  P   T+N LI G     ++E++++  E M  + L P   +++ ++   C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              +  +A  +    ++KG  P+ ITYS LI G+ ++   +E   LY EM    + P   
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            YT+LI++ C  G LE+A +    M    ++P V  Y  L+ 
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 174/413 (42%), Gaps = 88/413 (21%)

Query: 13  YLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           +L+Q   RG   +  ++ TL+   ++    +  +R+ + M +N   P+  T   LI+  C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G+++  + +L+ +  K  SP V+  ++++    +   ++E + + + M+ K +  DTI
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            YS ++    + R  + A  +YEEML+ G   + F YT  I AYC  G +E+A  L  EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546

Query: 190 ENAGLKPYDETFNLLIEGCAK------AKRI------EESL------------------- 218
              G+ P   T+++LI G  K      AKR+      EES+                   
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606

Query: 219 -------SYC------------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
                   +C            E M+ +   P  +A+N MI   C  G+ ++A  +    
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           +  GF  + +T   L+    KEG++ E+                    S+I  + +  +L
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNEL-------------------NSVIVHVLRSCEL 707

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            EA++                 + LV I+  +GN    L +  EM  +G  P+
Sbjct: 708 SEAEQ----------------AKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/312 (19%), Positives = 128/312 (41%), Gaps = 15/312 (4%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  V   ++++G S  ++S++T++    +S   D   R+ + M+E    P+  T  +L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+  + +   D+ + +      P     T+LI     E  +E+ + L   M+ K +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551

Query: 125 IHDTIAYSLIVYAKVKMRNLESAL-----VVYEEMLKRGFSANSFV----------YTTF 169
           + D + YS+++    K      A      + YEE +    + ++ +            + 
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  +C  G + EA+ + + M     KP    +N++I G  +A  I ++ +  ++M+    
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           L        +++ L + G   + N ++   L             L+    +EG +  VL 
Sbjct: 672 LLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLD 731

Query: 290 LYYEMEYKSISP 301
           +  EM      P
Sbjct: 732 VLAEMAKDGFLP 743



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/276 (20%), Positives = 109/276 (39%), Gaps = 50/276 (18%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R + ++G     I++++LI    +  R      +Y+ ML     P+E T   LI+
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI----------------LRIIQEERIE 110
           A C  G L+  + + + +  K   P V+  + LI                L++  EE + 
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588

Query: 111 -----------------------------EGMV-----LLKRMLRKNMIHDTIAYSLIVY 136
                                        +GM+     + + ML KN   D  AY+++++
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +  ++  A  +Y+EM+K GF  ++      + A  + GK+ E N ++  +  +    
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS 708

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
             E   +L+E   +   ++  L    +M     LP+
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 177/357 (49%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGFS++  +F T+IH +  + R +   R  + ML     PN+  + TL+  LCK G+   
Sbjct: 415 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSD 474

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            V++  R+  K     ++   +LI  + +   ++E + LLK+ML +  + D I Y+ ++ 
Sbjct: 475 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 534

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +E    +  EM+K+G   ++F Y   I   C  GK++EA  L  E ++  L P
Sbjct: 535 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 594

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ ++I+G  KA +IEE      +++++ L  +   +N +IR  C  GN  +A  + 
Sbjct: 595 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 654

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                KG  P   TYS LI G    G +++   L  EM  + + P +  YT+LI   C+ 
Sbjct: 655 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 714

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G++++     + M S+ + P    Y  ++  + + G+   A  L  EMV +G+ P T
Sbjct: 715 GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT 771



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 181/370 (48%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V R+L  +G   ++ +   L+  + K++  +  + +++ M + +  P+     T
Sbjct: 193 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVS-PDVYLFST 251

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I+A CKGG+++  + +   +     SP V+   +LI  + +   ++E     ++M++  
Sbjct: 252 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 311

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    I YS+++   +K+     A  V +E L++GF+ N  VY T I  YC+ G + +A 
Sbjct: 312 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 371

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M + G+ P   T N +I+G  K  ++E++    E+M+SR    +  AF  +I  L
Sbjct: 372 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 431

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     + A   L   L +   PN+   + L+GG  KEG+  + ++L++ +  K     L
Sbjct: 432 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 491

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               +LI  LC+ G ++EA +  K M     V     Y +L+    ++G   +   L  E
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551

Query: 364 MVSEGLKPST 373
           MV +G++P T
Sbjct: 552 MVKQGIEPDT 561



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 185/429 (43%), Gaps = 70/429 (16%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G S  +  F+T I+   K  + +   +++  M +    PN  T   LI  LCK G L 
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                 +++     +  +I  + LI  +++ E+  E   +LK  L K    + + Y+ ++
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 358

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               KM NL  AL +  +M+ +G + NS    + I  +C+ G++E+A C+++EM + G  
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 418

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF------------------- 236
                F  +I       R E +L +  +M+ R + P+                       
Sbjct: 419 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 478

Query: 237 ----------------NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                           N +I  LC+ GN ++A  +L   L++GF  ++ITY+ LI G  K
Sbjct: 479 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 538

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV-- 338
           EG+++E  KL  EM  + I P    Y  LI  +C+ GKL+EA   +   KS  LVP V  
Sbjct: 539 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 598

Query: 339 ---------------------------------DIYESLVGIHLEKGNKAKALHLCEEMV 365
                                             +Y +L+  +   GN  +A  L ++M 
Sbjct: 599 YGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR 658

Query: 366 SEGLKPSTS 374
           S+G+ P+T+
Sbjct: 659 SKGIPPTTA 667



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 175/404 (43%), Gaps = 35/404 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V +   ++GF+ + + +NTLI    K        RI   M+     PN  T+ +
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   CK GQ++    +L+ +  +  S      T++I  +    R E  +  L+ ML +N
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           M  +    + +V    K      A+ ++  +L++GF AN       I   C+ G ++EA 
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M   G      T+N LI GC K  ++EE      +M+ + + P    +N +I  +
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ------------------ 285
           C  G   +A  +      +   PN  TY  +I GY K  +I+                  
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 631

Query: 286 -----------------EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
                            E  KL+ +M  K I PT   Y+SLI  +C  G++E+A      
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M+   L+P V  Y +L+G + + G   K +++ +EM S  + P+
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 735



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 155/332 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L ++GF  +L++ N LIH + K+       R+ + MLE     ++ T  TLIS  CK G+
Sbjct: 482 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 541

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    +   +  +   P       LI  + +  +++E + L      ++++ +   Y +
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E    ++ E+L +    NS VY T I AYC  G   EA  L  +M + G
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ LI G     R+E++    ++M    LLP+   +  +I   C+ G   +  
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 721

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L         PN+ITY+ +I GY+K G+++   KL +EM  K I P    Y  L +  
Sbjct: 722 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 781

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           C+ GK+EE  K    M    L      Y +LV
Sbjct: 782 CKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 136/300 (45%), Gaps = 35/300 (11%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF L  I++NTLI    K  + +  +++   M++    P+  T   LI  +C+ G+L 
Sbjct: 519 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 578

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM----------- 124
             V++ +    +   P V     +I    + ++IEEG  L   +L +N+           
Sbjct: 579 EAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLI 638

Query: 125 --------------IHD----------TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
                         +HD          T  YS +++    +  +E A  + +EM K G  
Sbjct: 639 RAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLL 698

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            N   YT  IG YC+ G++++   ++QEM +  + P   T+ ++I+G +K+  ++ +   
Sbjct: 699 PNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL 758

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
             +M+ + ++P    +N +    C+ G  ++   +      +G   +EITY+ L+ G+ +
Sbjct: 759 LHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQ 818



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 11/281 (3%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE--SALVVYEEMLKRGFS 160
           ++    I  G V   R+L   +I   +    +++   K R++E  SA+    E+ + G +
Sbjct: 117 VLMRSLIVSGFVSPARLLLIRLIDRKLP---VLFGDPKNRHIEIASAMADLNEVGESGVA 173

Query: 161 ANSFVYTTFIGAYCEYGK---IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
             +      I  YC   +      A  + + + N G+ P  +T   L+    KA  +E+S
Sbjct: 174 VAAV--DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKS 231

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
             +  + M + + P    F+  I   C+ G  + A  +       G SPN +TY++LI G
Sbjct: 232 Y-WVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHG 290

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             K G + E  +   +M    ++ TL  Y+ LI+ L +  K  EA+   K        P 
Sbjct: 291 LCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 350

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             +Y +L+  + + GN   AL +  +MVS+G+ P++  L S
Sbjct: 351 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 177/357 (49%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGFS++  +F T+IH +  + R +   R  + ML     PN+  + TL+  LCK G+   
Sbjct: 482 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSD 541

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            V++  R+  K     ++   +LI  + +   ++E + LLK+ML +  + D I Y+ ++ 
Sbjct: 542 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 601

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +E    +  EM+K+G   ++F Y   I   C  GK++EA  L  E ++  L P
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 661

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ ++I+G  KA +IEE      +++++ L  +   +N +IR  C  GN  +A  + 
Sbjct: 662 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 721

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                KG  P   TYS LI G    G +++   L  EM  + + P +  YT+LI   C+ 
Sbjct: 722 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 781

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G++++     + M S+ + P    Y  ++  + + G+   A  L  EMV +G+ P T
Sbjct: 782 GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDT 838



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 181/370 (48%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V R+L  +G   ++ +   L+  + K++  +  + +++ M + +  P+     T
Sbjct: 260 FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVS-PDVYLFST 318

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I+A CKGG+++  + +   +     SP V+   +LI  + +   ++E     ++M++  
Sbjct: 319 AINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDG 378

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    I YS+++   +K+     A  V +E L++GF+ N  VY T I  YC+ G + +A 
Sbjct: 379 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 438

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M + G+ P   T N +I+G  K  ++E++    E+M+SR    +  AF  +I  L
Sbjct: 439 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 498

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     + A   L   L +   PN+   + L+GG  KEG+  + ++L++ +  K     L
Sbjct: 499 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               +LI  LC+ G ++EA +  K M     V     Y +L+    ++G   +   L  E
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618

Query: 364 MVSEGLKPST 373
           MV +G++P T
Sbjct: 619 MVKQGIEPDT 628



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 185/429 (43%), Gaps = 70/429 (16%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G S  +  F+T I+   K  + +   +++  M +    PN  T   LI  LCK G L 
Sbjct: 306 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                 +++     +  +I  + LI  +++ E+  E   +LK  L K    + + Y+ ++
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 425

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               KM NL  AL +  +M+ +G + NS    + I  +C+ G++E+A C+++EM + G  
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 485

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF------------------- 236
                F  +I       R E +L +  +M+ R + P+                       
Sbjct: 486 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 545

Query: 237 ----------------NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                           N +I  LC+ GN ++A  +L   L++GF  ++ITY+ LI G  K
Sbjct: 546 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 605

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV-- 338
           EG+++E  KL  EM  + I P    Y  LI  +C+ GKL+EA   +   KS  LVP V  
Sbjct: 606 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 665

Query: 339 ---------------------------------DIYESLVGIHLEKGNKAKALHLCEEMV 365
                                             +Y +L+  +   GN  +A  L ++M 
Sbjct: 666 YGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR 725

Query: 366 SEGLKPSTS 374
           S+G+ P+T+
Sbjct: 726 SKGIPPTTA 734



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 175/404 (43%), Gaps = 35/404 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V +   ++GF+ + + +NTLI    K        RI   M+     PN  T+ +
Sbjct: 399 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   CK GQ++    +L+ +  +  S      T++I  +    R E  +  L+ ML +N
Sbjct: 459 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 518

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           M  +    + +V    K      A+ ++  +L++GF AN       I   C+ G ++EA 
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M   G      T+N LI GC K  ++EE      +M+ + + P    +N +I  +
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ------------------ 285
           C  G   +A  +      +   PN  TY  +I GY K  +I+                  
Sbjct: 639 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 698

Query: 286 -----------------EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
                            E  KL+ +M  K I PT   Y+SLI  +C  G++E+A      
Sbjct: 699 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 758

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M+   L+P V  Y +L+G + + G   K +++ +EM S  + P+
Sbjct: 759 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN 802



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 151/316 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   L ++GF  +L++ N LIH + K+       R+ + MLE     ++ T  TLIS
Sbjct: 542 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 601

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+++    +   +  +   P       LI  + +  +++E + L      ++++ 
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 661

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y +++    K   +E    ++ E+L +    NS VY T I AYC  G   EA  L 
Sbjct: 662 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 721

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M + G+ P   T++ LI G     R+E++    ++M    LLP+   +  +I   C+ 
Sbjct: 722 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 781

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +   +L         PN+ITY+ +I GY+K G+++   KL +EM  K I P    Y
Sbjct: 782 GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTY 841

Query: 307 TSLISSLCQCGKLEEA 322
             L +  C+ GK+EE 
Sbjct: 842 NVLTNGFCKEGKIEEG 857



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 11/281 (3%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE--SALVVYEEMLKRGFS 160
           ++    I  G V   R+L   +I   +    +++   K R++E  SA+    E+ + G +
Sbjct: 184 VLMRSLIVSGFVSPARLLLIRLIDRKLP---VLFGDPKNRHIEIASAMADLNEVGESGVA 240

Query: 161 ANSFVYTTFIGAYCEYGK---IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
             +      I  YC   +      A  + + + N G+ P  +T   L+    KA  +E+S
Sbjct: 241 VAAV--DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKS 298

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
             +  + M + + P    F+  I   C+ G  + A  +       G SPN +TY++LI G
Sbjct: 299 Y-WVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHG 357

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             K G + E  +   +M    ++ TL  Y+ LI+ L +  K  EA+   K        P 
Sbjct: 358 LCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 417

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             +Y +L+  + + GN   AL +  +MVS+G+ P++  L S
Sbjct: 418 EVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 179/346 (51%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++ ++IH + KS +      ++  ML     P+E T   LI   CK G+++    + 
Sbjct: 381 DIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVH 440

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +++  K  +P V+  T+L   + +   I+    LL  M RK +  +   Y+ IV    K+
Sbjct: 441 NQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKI 500

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+E  + + EEM   GF  ++  YTT + AYC+ G++ +A+ L++ M N  L+P   TF
Sbjct: 501 GNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTF 560

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L+ G   +  +E+     E M+ + ++P+ + FN ++++ C   N +    +     D
Sbjct: 561 NVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHD 620

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  P+  TY+ LI G+ K   ++E   L+ EM  K  S T   Y +LI    +  K  E
Sbjct: 621 RGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVE 680

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           A K F+ M+ H LV   DIY+  V ++ E+GN    L LC+E ++E
Sbjct: 681 ARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTE 726



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 181/374 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  V     + G   + +S N ++H + +  +      +   M +   +P+  +   +
Sbjct: 224 KIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVV 283

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +S  C+ G+L   + ++D + GK   P   +  ++IL + +   + E   LL+ M +  +
Sbjct: 284 VSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGV 343

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ ++    K+ N+ +A  +++EM ++    +   YT+ I   C+ GK+ EA  
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEARE 403

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  EM   GL+P + T+  LI+G  KA  ++E+ S   QM+ + L P+   +  +   LC
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G    AN +L     KG  PN  TY+ ++ G  K G I++ +KL  EM+     P   
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT+L+ + C+ G++ +A +  +IM +  L P +  +  L+      G       L E M
Sbjct: 524 TYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWM 583

Query: 365 VSEGLKPSTSYLCS 378
           + +G+ P+ +   S
Sbjct: 584 LEKGIMPNATTFNS 597



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 150/314 (47%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           +P+     T+IS  CK G +     + D +  K+  P ++  TS+I  I +  ++ E   
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEARE 403

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           +   ML K +  D + Y+ ++    K   ++ A  V+ +M+++G + N   YT      C
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + G+I+ AN L+ EM   GL+P   T+N ++ G  K   IE+++   E+M      P   
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +  ++   C+ G   +A+ +L + L+K   P  +T++ L+ G+   G +++  +L   M
Sbjct: 524 TYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWM 583

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             K I P    + SL+   C    +    + +K M    ++P  + Y  L+  H +  N 
Sbjct: 584 LEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNM 643

Query: 355 AKALHLCEEMVSEG 368
            +A  L +EMV +G
Sbjct: 644 KEAWFLHKEMVEKG 657



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 148/319 (46%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+E     +I  LCK G++     +L  +      P  +V T++I    +   +     L
Sbjct: 310 PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M RK ++ D + Y+ +++   K   +  A  ++ EML +G   +   YT  I  YC+
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCK 429

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+++EA  +  +M   GL P   T+  L +G  K   I+ +     +M  + L P+   
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYT 489

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC+ GN +Q   ++      GF P+ ITY+ L+  Y K GE+ +  +L   M 
Sbjct: 490 YNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIML 549

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K + PTL  +  L++  C  G LE+ ++  + M    ++P    + SL+  +  K N  
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMR 609

Query: 356 KALHLCEEMVSEGLKPSTS 374
               + + M   G+ P ++
Sbjct: 610 ATTEIYKAMHDRGVMPDSN 628



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/257 (19%), Positives = 114/257 (44%), Gaps = 35/257 (13%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA ++   + ++G   ++ ++NT+++ + K    +   ++ + M     YP+  T  TL
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + A CK G++    ++L  +  KR  P ++    L+        +E+G  L++ ML K +
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 125 IH-----------------------------------DTIAYSLIVYAKVKMRNLESALV 149
           +                                    D+  Y++++    K RN++ A  
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +++EM+++G+S  +  Y   I  + +  K  EA  L +EM   GL    + +++ ++   
Sbjct: 649 LHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNY 708

Query: 210 KAKRIEESLSYCEQMMS 226
           +    E +L  C++ M+
Sbjct: 709 EEGNWEITLELCDEFMT 725


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 181/371 (48%), Gaps = 1/371 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLENIRYPNEATI 61
           L + A  +    +  GF   ++S+N ++    +S RN      +++ ML++   PN  T 
Sbjct: 149 LIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTY 208

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C  G L   +   DR+  K C P V+   +LI    +  +I++G  LL+ M  
Sbjct: 209 NILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMAL 268

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  + I+Y++++    +   ++    V  EM KRG+S +   Y T I  YC+ G   +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  EM   GL P   T+  LI    KA  +  +  + +QM  R L P+   +  ++ 
Sbjct: 329 ALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVD 388

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              + G   +A  +L   +D GFSP+ +TY+ LI G+   G++ + + +  +M+ K ++P
Sbjct: 389 GFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTP 448

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            + +Y++++S  C+   ++EA +  + M +  + P    Y SL+    E+    +A  L 
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLF 508

Query: 362 EEMVSEGLKPS 372
           +EM+  GL P 
Sbjct: 509 DEMLRVGLPPD 519



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 182/390 (46%), Gaps = 30/390 (7%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ E++F V   + +RG+SL  +++NTLI    K         ++  ML +   P+  T 
Sbjct: 290 RMKEISF-VLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITY 348

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI ++CK G +    + LD++  +   P     T+L+    Q+  + E   +LK M+ 
Sbjct: 349 TSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMID 408

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                  + Y+ ++        +  A+ V E+M ++G + +   Y+T +  +C    ++E
Sbjct: 409 NGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDE 468

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + ++M   G+KP   T++ LI+G  + +R +E+    ++M+   L P    +  +I 
Sbjct: 469 ALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALIN 528

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE----VLKLYYE---- 293
             C  G+ ++A  +    ++KG  P+ +TYS LI G  K+   +E    +LKL+YE    
Sbjct: 529 AYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVP 588

Query: 294 --------------MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
                         +E+KS+        SLI   C  G + EAD+ F+ M   +  P   
Sbjct: 589 SDVTYHTLIENCSNIEFKSV-------VSLIKGFCMKGMMTEADQVFESMLEKNHKPDGT 641

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            Y  ++  H   G+  KA  L +EMV  G 
Sbjct: 642 AYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 165/345 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  +  F++ R +  +G   +LIS+N +I+ + +  R   +  +   M +     +E T
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI   CK G     + M   +     SP VI  TSLI  + +   +      L +M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  +   Y+ +V    +   +  A  V +EM+  GFS +   Y   I  +C  GK+ 
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  ++++M+  GL P   +++ ++ G  ++  ++E+L    +M+++ + P    ++ +I
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +  CE    K+A  +    L  G  P+E TY+ LI  Y  EG++Q+ ++L+ EM  K + 
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           P +  Y+ LI+ L +  +  EA +    +     VP    Y +L+
Sbjct: 553 PDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI 597



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 165/343 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            +VA      +E++G   +++++NTLI    K  + D  + + + M      PN  +   
Sbjct: 221 LDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LC+ G+++    +L  ++ +  S   +   +LI    +E    + +V+   MLR  
Sbjct: 281 VINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    I Y+ ++++  K  N+  A    ++M  RG   N   YTT +  + + G + EA 
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++EM + G  P   T+N LI G   A ++ ++++  E M  + L P   +++ ++   
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C   +  +A  +    + KG  P+ ITYS LI G+ ++   +E   L+ EM    + P  
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             YT+LI++ C  G L++A +    M    ++P V  Y  L+ 
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLIN 563



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 177/413 (42%), Gaps = 88/413 (21%)

Query: 13  YLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           +L+Q   RG   +  ++ TL+   ++    +  +R+ + M++N   P+  T   LI+  C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G++   + +L+ +  K  +P V+  ++++    +   ++E + + ++M+ K +  DTI
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            YS ++    + R  + A  +++EML+ G   + F YT  I AYC  G +++A  L  EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546

Query: 190 ENAGLKPYDETFNLLIEGCAK------AKRI------EESL------------------- 218
              G+ P   T+++LI G  K      AKR+      EES+                   
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606

Query: 219 -------SYC------------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
                   +C            E M+ +   P  +A+N MI   C  G+ ++A  +    
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM 666

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           +  GF  + +T   L+    KEG++ E+                    S+I+++ +  +L
Sbjct: 667 VKSGFLLHTVTVIALVKTLHKEGKVNEL-------------------NSVIANVLRSCEL 707

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            EA++                 + LV I+  +GN    L +  EM  +G  P+
Sbjct: 708 SEAEQ----------------AKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 184/404 (45%), Gaps = 35/404 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF +   +   G   +LI +NTL++ V K+ + +    I Q M+E    P+  T   L
Sbjct: 328 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMV------------------------------- 93
           I   C+G  +    ++LD +  ++ +P V                               
Sbjct: 388 IEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL 447

Query: 94  ----IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
               +V T+L+    +E R+EE  ++L+RM  + ++ D   Y+ ++    K + +E A  
Sbjct: 448 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 507

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
              EML+R    N+  Y  FI  Y + G++E A+    EM + G+ P    +  LIEG  
Sbjct: 508 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K   + E+ S    ++SR++L     ++ +I  L   G   +A G+ +   +KG  PN  
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ LI G  K+G + +  +L  EM  K I+P +  Y  LI  LC+ G++E A   F  +
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +   L P    Y ++V  + +  N   A  L EEM+  G+ P  
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDA 731



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 179/373 (47%), Gaps = 17/373 (4%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ----- 73
           F  SL+S N+L+  + K ++ +L W+++  M  +   P+  T   +ISA CK G      
Sbjct: 185 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244

Query: 74  ------------LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
                       L   +++   +  K   P +     LI     E+R  E  ++L  M+ 
Sbjct: 245 RVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 304

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  + I Y+ ++   ++  ++E A  + +EM+  G  AN  ++ T +   C+ GK+E+
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 364

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +MQEM   G++P  +T++LLIEG  + + +  +    ++M  RKL P+   ++ +I 
Sbjct: 365 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 424

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC CGN +  N +L   +  G  PN + Y+ L+  +AKEG ++E   +   M  + I P
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y SLI   C+  ++EEA  Y   M    L P    Y + +  + + G    A    
Sbjct: 485 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 544

Query: 362 EEMVSEGLKPSTS 374
            EM+S G+ P+  
Sbjct: 545 NEMLSCGVLPNVG 557



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 184/406 (45%), Gaps = 36/406 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G    +  +N+LI    K+ R +        MLE    PN  T    I    K G+
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 536

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++      + +      P V + T+LI    +E  + E   + + +L + ++ D   YS+
Sbjct: 537 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 596

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   +   +  A  ++ E+ ++G   N+F Y + I   C+ G +++A+ L++EM   G
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N+LI+G  KA  IE + +  + +  R L P+C  +  M+   C+  N   A 
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 716

Query: 254 GMLTLALDKGFSPNE----------------------------------ITYSHLIGGYA 279
            +L   L +G  P+                                   ++++ LI GY 
Sbjct: 717 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYC 776

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K G++QE   L  EM  K   P    YTSLI   C+ G + EA + +  M+  +++P   
Sbjct: 777 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 836

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS--TSYLCSASTCR 383
            Y SL+  +   GN ++   L EEMV++G++P   T Y+   + CR
Sbjct: 837 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 882



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 172/372 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL + A ++ R +  +G    L +++ LI+      R+     +   M++    P   T 
Sbjct: 255 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 314

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI    + G ++    + D +        +I+  +L+  + +  ++E+ + +++ M+ 
Sbjct: 315 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 374

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  D+  YSL++    + +N+  A  + +EM KR  +     Y+  I   C  G ++ 
Sbjct: 375 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
            N +++EM   GLKP    +  L+   AK  R+EES    E+M  + +LP    +N +I 
Sbjct: 435 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 494

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+    ++A   L   L++   PN  TY   I GY+K GE++   + + EM    + P
Sbjct: 495 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 554

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  YT+LI   C+ G + EA   F+ + S  ++  V  Y  L+      G   +A  + 
Sbjct: 555 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614

Query: 362 EEMVSEGLKPST 373
            E+  +GL P+ 
Sbjct: 615 SELQEKGLLPNA 626



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 172/376 (45%), Gaps = 36/376 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V R++  R     + +++ LIH ++++ +    + I+  + E    PN  T  +LIS
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G                                    +++   LL+ M  K +  
Sbjct: 635 GSCKQGN-----------------------------------VDKASQLLEEMCIKGINP 659

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y++++    K   +E A  +++++  RG + N   Y   +  YC+      A  L+
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 719

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G+ P    +N+++  C K ++ E++L   ++M+ +    + S FN +I   C+ 
Sbjct: 720 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKS 778

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++AN +L   ++K F PN +TY+ LI    K G + E  +L+ EM+ +++ PT   Y
Sbjct: 779 GKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTY 838

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSL+      G + E    F+ M +  + P    Y  ++  +  +GN  +A  L +E++ 
Sbjct: 839 TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILV 898

Query: 367 EGLKPSTSYLCSASTC 382
           +G+   + +     TC
Sbjct: 899 KGMPMKSGFRLGLPTC 914



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 117/293 (39%), Gaps = 58/293 (19%)

Query: 138 KVKMRNLESALVVYEEMLK-----RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           K  +RN +S L V   ++K      G S NS ++   + +Y + G + EA  +    +N 
Sbjct: 125 KCIIRNSDSPLAVLGSIVKCYRSCNG-SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNF 183

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   + N L+    K  ++E      + M + K+LP    +  MI   C+ GN K A
Sbjct: 184 EFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 243

Query: 253 NGML-----------------TLALDKGFSPN---------------------------- 267
             +L                    +DKG  P+                            
Sbjct: 244 KRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI 303

Query: 268 -------EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
                   ITY+ LI G+ ++G+I++  ++  EM    I   L  + +L++ +C+ GK+E
Sbjct: 304 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 363

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +A +  + M    + P    Y  L+  H    N A+A  L +EM    L P+ 
Sbjct: 364 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 416



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 37/210 (17%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A D+ + + ++GF+ S +SFNTLI    KS +      + + M+E    PN  T  +
Sbjct: 747 FEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK G +                                    E   L   M  +N
Sbjct: 806 LIDHNCKAGMMG-----------------------------------EAKRLWLEMQERN 830

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++     Y+ +++    + N+     ++EEM+ +G   +   Y   I AYC  G + EA 
Sbjct: 831 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
            L  E+   G+ P    F L +  C+   R
Sbjct: 891 KLKDEILVKGM-PMKSGFRLGLPTCSVIAR 919


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 184/404 (45%), Gaps = 35/404 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF +   +   G   +LI +NTL++ V K+ + +    I Q M+E    P+  T   L
Sbjct: 337 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 396

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMV------------------------------- 93
           I   C+G  +    ++LD +  ++ +P V                               
Sbjct: 397 IEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGL 456

Query: 94  ----IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
               +V T+L+    +E R+EE  ++L+RM  + ++ D   Y+ ++    K + +E A  
Sbjct: 457 KPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEART 516

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
              EML+R    N+  Y  FI  Y + G++E A+    EM + G+ P    +  LIEG  
Sbjct: 517 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K   + E+ S    ++SR++L     ++ +I  L   G   +A G+ +   +KG  PN  
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ LI G  K+G + +  +L  EM  K I+P +  Y  LI  LC+ G++E A   F  +
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +   L P    Y ++V  + +  N   A  L EEM+  G+ P  
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDA 740



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 185/391 (47%), Gaps = 35/391 (8%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  SL+S N+L+  + K ++ +L W+++  M  +   P+  T   +ISA CK G ++   
Sbjct: 176 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 235

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD----------- 127
            +L  +  K CSP ++    +I  + +   ++E + L + M+ K ++ D           
Sbjct: 236 RVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 295

Query: 128 ------------------------TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
                                    I Y+ ++   ++  ++E A  + +EM+  G  AN 
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 355

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
            ++ T +   C+ GK+E+A  +MQEM   G++P  +T++LLIEG  + + +  +    ++
Sbjct: 356 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 415

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M  RKL P+   ++ +I  LC CGN +  N +L   +  G  PN + Y+ L+  +AKEG 
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           ++E   +   M  + I P +  Y SLI   C+  ++EEA  Y   M    L P    Y +
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +  + + G    A     EM+S G+ P+  
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 566



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 184/406 (45%), Gaps = 36/406 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G    +  +N+LI    K+ R +        MLE    PN  T    I    K G+
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++      + +      P V + T+LI    +E  + E   + + +L + ++ D   YS+
Sbjct: 546 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 605

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   +   +  A  ++ E+ ++G   N+F Y + I   C+ G +++A+ L++EM   G
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N+LI+G  KA  IE + +  + +  R L P+C  +  M+   C+  N   A 
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 725

Query: 254 GMLTLALDKGFSPNE----------------------------------ITYSHLIGGYA 279
            +L   L +G  P+                                   ++++ LI GY 
Sbjct: 726 QLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYC 785

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K G++QE   L  EM  K   P    YTSLI   C+ G + EA + +  M+  +++P   
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS--TSYLCSASTCR 383
            Y SL+  +   GN ++   L EEMV++G++P   T Y+   + CR
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 891



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 163/324 (50%), Gaps = 7/324 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   L+++G   +  ++N+LI    K    D   ++ + M      P+  T   LI 
Sbjct: 619 AFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILID 678

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+++   ++ D I G+  +P  +   +++    + +       LL+ ML + +  
Sbjct: 679 GLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 738

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++I+    K    E AL +++EML++GF A++  + T I  YC+ GK++EAN L+
Sbjct: 739 DAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLL 797

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM      P   T+  LI+   KA  + E+     +M  R ++P+   +  ++      
Sbjct: 798 EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNI 857

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN  + + +    + KG  P+++TY  +I  Y +EG + E  KL  E+  K +  ++ AY
Sbjct: 858 GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAY 917

Query: 307 TSLISSLCQCGKLEEADKYFKIMK 330
            +LI +LC+       +++F+++K
Sbjct: 918 DALIQALCK------KEEFFEVLK 935



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 172/372 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL + A ++ R +  +G    L +++ LI+      R+     +   M++    P   T 
Sbjct: 264 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 323

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI    + G ++    + D +        +I+  +L+  + +  ++E+ + +++ M+ 
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  D+  YSL++    + +N+  A  + +EM KR  +     Y+  I   C  G ++ 
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
            N +++EM   GLKP    +  L+   AK  R+EES    E+M  + +LP    +N +I 
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+    ++A   L   L++   PN  TY   I GY+K GE++   + + EM    + P
Sbjct: 504 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 563

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  YT+LI   C+ G + EA   F+ + S  ++  V  Y  L+      G   +A  + 
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623

Query: 362 EEMVSEGLKPST 373
            E+  +GL P+ 
Sbjct: 624 SELQEKGLLPNA 635



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 6/240 (2%)

Query: 138 KVKMRNLESALVVYEEMLK-----RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           K  +RN +S L V   ++K      G S NS ++   + +Y + G + EA  +    +N 
Sbjct: 116 KCIIRNSDSPLAVLGSIVKCYRSCNG-SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNF 174

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   + N L+    K  ++E      + M + K+LP    +  MI   C+ GN K A
Sbjct: 175 EFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 234

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L    +KG SPN +TY+ +IGG  +   + E ++L   M  K + P L  Y  LI+ 
Sbjct: 235 KRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILING 294

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C   +  EA      M    L P    Y +L+   + +G+  +A  + +EMV+ G++ +
Sbjct: 295 FCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEAN 354


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 173/370 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A+++   + +RG      S++TL+  + K+ + D+  ++++        P+     
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G+L     + +++    C P V+  T+L+  + + +R++E   +L+ M  +
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N   + I YS ++    K   +  A  V++ M+ RG   N   Y + I  +C    ++ A
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             LM+EM   G  P   T+N LI+G  K  R  E+      M ++   P    ++ +I  
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+      A  +    L +   P+ +T+S L+ GY   G + +  +L  EM     SP 
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YTSL+   C+ G++ EA +  K M      P V  Y +L+      G    A  L E
Sbjct: 546 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605

Query: 363 EMVSEGLKPS 372
           EMV  G++P+
Sbjct: 606 EMVGNGVQPN 615



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 172/343 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +++++TLI  + K+ R D   ++++ M EN   P+  T   L+  LCKG +LQ    +L
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  + C+P VI  +SLI  + +  ++ +   + KRM+ + +  + + Y+ +++     
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++SAL++ EEM   G   +   Y T I   C+ G+  EAN L  +M+     P   T+
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + LI G  K +RI+ + +  + M+ + +LP    F+ ++   C  G    A  +L   + 
Sbjct: 480 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 539

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
              SP+  TY+ L+ G+ K G + E  ++   M  +   P +  YT+LI + C+ GK   
Sbjct: 540 SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTV 599

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A +  + M  + + P V  Y SL+G     G+  +A  + E +
Sbjct: 600 AYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERL 642



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 168/368 (45%), Gaps = 39/368 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ + + +++ G + ++++++T+IH   +  + D  +++++ M+EN   PN  T  TL+S
Sbjct: 180 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 239

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G +                                   +E   LL  M  + +  
Sbjct: 240 GLCRNGLM-----------------------------------DEAYELLDEMRERGLQP 264

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  +Y  ++    K   ++ AL V+E+        +   Y+T I   C+ G+++EA  L 
Sbjct: 265 DKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLF 324

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M     +P   TF  L++G  K  R++E+    E M  R   P+   ++ +I  LC+ 
Sbjct: 325 EKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKT 384

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A  +    + +G  PN +TY+ LI G+     +   L L  EM      P +  Y
Sbjct: 385 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 444

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKAKALHLCEEM 364
            +LI  LC+ G+  EA++ F  MK+    P V  Y  L+G    LE+ + A+ L   ++M
Sbjct: 445 NTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF--DDM 502

Query: 365 VSEGLKPS 372
           + + + P 
Sbjct: 503 LKQAVLPD 510



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 173/360 (48%), Gaps = 7/360 (1%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           +Q+GF  ++ ++N L   + ++ R D    I ++       PN  T   +I  LCK G L
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKNMIHDTIAYSL 133
               ++L+ +      P   +   +I  + +     + +   + M   KN+    I +++
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNV----ITWTI 131

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L  A   + +M K+G   N + Y   I  +C+  K+  A  L++EM+ +G
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T++ +I G  +  +++ +     QM+    +P+   +N ++  LC  G   +A 
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L    ++G  P++ +Y  L+ G  K G+I   LK++ +       P + AY++LI+ L
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGLKPS 372
           C+ G+L+EA K F+ M+ +S  P V  + +L+   L KG++  +A  + E M      P+
Sbjct: 312 CKAGRLDEACKLFEKMRENSCEPDVVTFTALMD-GLCKGDRLQEAQQVLETMEDRNCTPN 370



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 1/360 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +E R  + ++I++++LI  + K+ +      +++ M+     PN  T  +LI 
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C    + + + +++ +    C P +I   +LI  + +  R  E   L   M  K    
Sbjct: 415 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 474

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS ++    K+  ++ A  ++++MLK+    +   ++T +  YC  G +++A  L+
Sbjct: 475 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 534

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM  +   P   T+  L++G  K  R+ E+    ++M  R   P+   +  +I   C  
Sbjct: 535 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 594

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY-KSISPTLPA 305
           G    A  +L   +  G  PN ITY  LIGG+   G+++E  K+   +E  ++    + A
Sbjct: 595 GKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFA 654

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  ++  LC+ G++  A +  + +K     P  DIY +L+    +     KA+ + EEM 
Sbjct: 655 YRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 714



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 162/348 (46%), Gaps = 5/348 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N +IH + K+ RN      Y   +E  +  N  T   +I  LCK  +L        ++ 
Sbjct: 97  YNFVIHALCKA-RNTAKALDYFRSMECEK--NVITWTIMIDGLCKANRLPEATTYFAKMK 153

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            K   P       LI    +  ++    +LLK M    +  + + YS +++   +   ++
Sbjct: 154 KKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVD 213

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A  ++ +M++ G   N   Y T +   C  G ++EA  L+ EM   GL+P   +++ L+
Sbjct: 214 TAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLM 273

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  +I+ +L   E   +    P   A++ +I  LC+ G   +A  +     +    
Sbjct: 274 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCE 333

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ +T++ L+ G  K   +QE  ++   ME ++ +P +  Y+SLI  LC+ G++ +A + 
Sbjct: 334 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393

Query: 326 FKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPS 372
           FK M    + P V  Y SL+ G  +  G  + AL L EEM + G  P 
Sbjct: 394 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS-ALLLMEEMTATGCLPD 440



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 166/357 (46%), Gaps = 1/357 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I++  +I  + K++R       +  M +    PNE T   LI+  CK  ++     +L
Sbjct: 125 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 184

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +     +P V+  +++I    ++ +++    L ++M+    + + + Y+ ++    + 
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 244

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A  + +EM +RG   + F Y T +   C+ GKI+ A  + ++  N    P    +
Sbjct: 245 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 304

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + LI G  KA R++E+    E+M      P    F  ++  LC+    ++A  +L    D
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +  +PN ITYS LI G  K G++++  +++  M  + I P +  Y SLI   C    ++ 
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLC 377
           A    + M +   +P +  Y +L+    + G   +A  L  +M ++   P   +Y C
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 37/271 (13%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I+++ LI    K +R D+   ++  ML+    P+  T  TL+   C  G +     +L
Sbjct: 475 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 534

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +    CSP V   TSL+    +  R+ E   +LKRM ++    + + Y+ ++ A  + 
Sbjct: 535 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 594

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-----------NC------ 184
                A  + EEM+  G   N   Y + IG +C  G +EEA           NC      
Sbjct: 595 GKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFA 654

Query: 185 -------------------LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM- 224
                              L++ ++ +G  P  + +  LI G  + K + +++   E+M 
Sbjct: 655 YRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 714

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           +SRK  P+  A+  +I+ L   G  ++AN +
Sbjct: 715 LSRKSRPNAEAYEAVIQELAREGRHEEANAL 745


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 181/383 (47%), Gaps = 35/383 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +L++ + N L++V+ K+ R +L+WRIY+ M+ N   P+  T  TLI   C+ G L   
Sbjct: 142 GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRA 201

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE-------------------------- 111
            +M D +  K   P VIV T LI  +  + +IEE                          
Sbjct: 202 QEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDG 261

Query: 112 ---------GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
                     + L + ML + ++ D + + +++    K   +++A  ++  M+K   + N
Sbjct: 262 YCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPN 321

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
             VY + I AYC+ G + EA  L  E+E   + P   T+++LI G     R EE+ +  E
Sbjct: 322 IAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFE 381

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M    +L +   +N +I   C+ G   +A  + +   + G  PN IT+S LI GY K  
Sbjct: 382 KMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIR 441

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            +Q  + +Y EM  KS+SP +  YT++I   C+ G ++EA K +  M  + + P      
Sbjct: 442 NLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTIS 501

Query: 343 SLVGIHLEKGNKAKALHLCEEMV 365
            L+    + G  + AL L  E +
Sbjct: 502 CLLDGLCKDGKISDALELFTEKI 524



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 169/343 (49%), Gaps = 13/343 (3%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + + G   ++ ++NTL+    K        R+YQ ML     P+  T   LI  LCK 
Sbjct: 241 RAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKF 300

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+++   ++   +     +P + V  SLI    +   + E M L   + R  +  D   Y
Sbjct: 301 GEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTY 360

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+++     +   E A  ++E+M K G  ANS  Y + I   C+ GK+++A  +  +M  
Sbjct: 361 SILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTE 420

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G++P   TF+ LI+G  K + ++ ++    +M+ + L P    +  MI   C+ G+ K+
Sbjct: 421 NGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKE 480

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE-MEYKSI---------SP 301
           A  + +  LD G +PN  T S L+ G  K+G+I + L+L+ E +E+++           P
Sbjct: 481 ALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKP 540

Query: 302 TLP---AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           +L    AYT+LI  LCQ G+  +A K F  M+ + L P   IY
Sbjct: 541 SLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIY 583



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 129/308 (41%), Gaps = 48/308 (15%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +++F  LI  + K         ++ +M++    PN A   +LI A CK G +   
Sbjct: 282 GLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEA 341

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY------ 131
           + +   +     SP V   + LI  +    R EE   + ++M ++ ++ +++ Y      
Sbjct: 342 MALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDG 401

Query: 132 -----------------------------SLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
                                        S ++    K+RNL++A+ +Y EM+ +  S +
Sbjct: 402 CCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPD 461

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              YT  I  +C+YG ++EA  L  +M + G+ P   T + L++G  K  +I ++L    
Sbjct: 462 VVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFT 521

Query: 223 QMM-------------SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           + +             S+  L +  A+  +I  LC+ G   +A  + +     G  P+E+
Sbjct: 522 EKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEV 581

Query: 270 TYSHLIGG 277
            Y  ++ G
Sbjct: 582 IYVVMLRG 589



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 19/255 (7%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   + + G   + +++N+LI    K  + D    I   M EN   PN  T  TL
Sbjct: 374 EEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTL 433

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK   LQ  + +   +  K  SP V+  T++I    +   ++E + L   ML   +
Sbjct: 434 IDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGI 493

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLK---------RGFS----ANSFVYTTFIG 171
             +    S ++    K   +  AL ++ E ++          G S     N   YT  I 
Sbjct: 494 TPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIH 553

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             C+ G+  +A  L  +M   GL+P +  + +++ G  + K I   L     M+   ++P
Sbjct: 554 GLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLH--ADMLKFGVIP 611

Query: 232 SCSAFNEMIRRLCEC 246
           + SA + +   LCEC
Sbjct: 612 N-SAVHVI---LCEC 622



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 51/234 (21%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLI-----------------HVVTKSDRNDLV------- 42
           A ++C  + + G   ++I+F+TLI                  +V KS   D+V       
Sbjct: 411 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 470

Query: 43  -----------WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD---RIHGKR 88
                       ++Y  ML+N   PN  TI  L+  LCK G++   +++          R
Sbjct: 471 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPR 530

Query: 89  CS-------PMV---IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           C+       P +   +  T+LI  + Q+ +  + + L   M R  +  D + Y +++   
Sbjct: 531 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEMEN 191
            +++ +   ++++ +MLK G   NS V+      Y E G ++ A NC     EN
Sbjct: 591 FQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEEN 642


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 173/370 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A+++   + +RG      S++TL+  + K+ + D+  ++++        P+     
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G+L     + +++    C P V+  T+L+  + + +R++E   +L+ M  +
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 246

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N   + I YS ++    K   +  A  V++ M+ RG   N   Y + I  +C    ++ A
Sbjct: 247 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             LM+EM   G  P   T+N LI+G  K  R  E+      M ++   P    ++ +I  
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 366

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+      A  +    L +   P+ +T+S L+ GY   G + +  +L  EM     SP 
Sbjct: 367 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 426

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YTSL+   C+ G++ EA +  K M      P V  Y +L+      G    A  L E
Sbjct: 427 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLE 486

Query: 363 EMVSEGLKPS 372
           EMV  G++P+
Sbjct: 487 EMVGNGVQPN 496



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 172/343 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +++++TLI  + K+ R D   ++++ M EN   P+  T   L+  LCKG +LQ    +L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  + C+P VI  +SLI  + +  ++ +   + KRM+ + +  + + Y+ +++     
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++SAL++ EEM   G   +   Y T I   C+ G+  EAN L  +M+     P   T+
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + LI G  K +RI+ + +  + M+ + +LP    F+ ++   C  G    A  +L   + 
Sbjct: 361 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 420

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
              SP+  TY+ L+ G+ K G + E  ++   M  +   P +  YT+LI + C+ GK   
Sbjct: 421 SDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTV 480

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A K  + M  + + P V  Y SL+G     G+  +A  + E +
Sbjct: 481 AYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERL 523



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 168/368 (45%), Gaps = 39/368 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ + + +++ G + ++++++T+IH   +  + D  +++++ M+EN   PN  T  TL+S
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G +                                   +E   LL  M  + +  
Sbjct: 121 GLCRNGLM-----------------------------------DEAYELLDEMRERGLQP 145

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  +Y  ++    K   ++ AL V+E+        +   Y+T I   C+ G+++EA  L 
Sbjct: 146 DKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLF 205

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M     +P   TF  L++G  K  R++E+    E M  R   P+   ++ +I  LC+ 
Sbjct: 206 EKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKT 265

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A  +    + +G  PN +TY+ LI G+     +   L L  EM      P +  Y
Sbjct: 266 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 325

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKAKALHLCEEM 364
            +LI  LC+ G+  EA++ F  MK+    P V  Y  L+G    LE+ + A+ L   ++M
Sbjct: 326 NTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF--DDM 383

Query: 365 VSEGLKPS 372
           + + + P 
Sbjct: 384 LKQAVLPD 391



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 1/360 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +E R  + ++I++++LI  + K+ +      +++ M+     PN  T  +LI 
Sbjct: 236 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 295

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C    + + + +++ +    C P +I   +LI  + +  R  E   L   M  K    
Sbjct: 296 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP 355

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS ++    K+  ++ A  ++++MLK+    +   ++T +  YC  G +++A  L+
Sbjct: 356 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 415

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM  +   P   T+  L++G  K  R+ E+    ++M  R   P+   +  +I   C  
Sbjct: 416 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 475

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY-KSISPTLPA 305
           G    A  +L   +  G  PN ITY  LIGG+   G+++E  K+   +E  ++    + A
Sbjct: 476 GKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFA 535

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  ++  LC+ G++  A +  + +K     P  DIY +L+    +     KA+ + EEM 
Sbjct: 536 YRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 595



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 165/357 (46%), Gaps = 1/357 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I++  +I  + K++R       +  M +    PNE T   LI+  CK  ++     +L
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +     +P V+  +++I    ++ +++    L ++M+    + + + Y+ ++    + 
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A  + +EM +RG   + F Y T +   C+ GKI+ A  + ++  N    P    +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + LI G  K  R++E+    E+M      P    F  ++  LC+    ++A  +L    D
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +  +PN ITYS LI G  K G++++  +++  M  + I P +  Y SLI   C    ++ 
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLC 377
           A    + M +   +P +  Y +L+    + G   +A  L  +M ++   P   +Y C
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 136/284 (47%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           C   VI  T +I  + +  R+ E      +M +K  + +   Y++++    K+  +  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           ++ +EM + G + N   Y+T I  +C   K++ A  L ++M   G  P   T+N L+ G 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +   ++E+    ++M  R L P   +++ ++  LC+ G    A  +     +    P+ 
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           + YS LI G  K G + E  KL+ +M   S  P +  +T+L+  LC+  +L+EA +  + 
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M+  +  P V  Y SL+    + G    A  + + M+  G++P+
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 286



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 37/271 (13%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I+++ LI    K +R D+   ++  ML+    P+  T  TL+   C  G +     +L
Sbjct: 356 DVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLL 415

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +    CSP V   TSL+    +  R+ E   +LKRM ++    + + Y+ ++ A  + 
Sbjct: 416 EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 475

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-----------NC------ 184
                A  + EEM+  G   N   Y + IG +C  G +EEA           NC      
Sbjct: 476 GKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFA 535

Query: 185 -------------------LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM- 224
                              L++ ++ +G  P  + +  LI G  + K + +++   E+M 
Sbjct: 536 YRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 595

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           +SRK  P+  A+  +I+ L   G  ++AN +
Sbjct: 596 LSRKSRPNAEAYEAVIQELAREGRHEEANAL 626


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 159/315 (50%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           AT    I  LCK  ++   V++ + +  K     V    +L+L + + E  E G  ++  
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+    +    A S +V    K  N+ SA  +  ++ K G + + FVY   I + C+ GK
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++EA  L   M + GL P D T+++LI+   K  +++ +L +  +M    +  +   ++ 
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C+ G  + A  +    +  G  PN + Y+ LI GY KEGE+    +LY+EM  K 
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           ISP    +T+LIS LC   ++ EA+K F  M   +++P    Y  L+  H ++GN  +A 
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 359 HLCEEMVSEGLKPST 373
            L +EMV +GL P T
Sbjct: 551 ELLDEMVEKGLVPDT 565



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 179/385 (46%), Gaps = 10/385 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R++E A ++   L  +G    + ++ TL+  + K +  +    +   M+E    P+EA +
Sbjct: 265 RVWE-AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV 323

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  L K G + +  D+++++     +P + V  +LI  + ++ +++E   L   M  
Sbjct: 324 SNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  + + YS+++ +  K   L+ AL    +M + G  A  + Y++ I  +C+ GK+  
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L  EM   GLKP    +  LI G  K   +  +     +M  + + P+   F  +I 
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS 503

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC      +AN +    ++    PNE+TY+ LI G+ KEG      +L  EM  K + P
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVP 563

Query: 302 TLPAYTSLISSLCQCGKLEEADKYF--------KIMKSHSLVPGVDIYESLVGIHLEKGN 353
               Y  LIS LC  G++ EA ++         K+ +    +P V  Y +L+    + G 
Sbjct: 564 DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGL 623

Query: 354 KAKALHLCEEMV-SEGLKPSTSYLC 377
             KA  LC EM+ S  L    +Y C
Sbjct: 624 MDKAELLCREMLASNSLPNQNTYAC 648



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 175/377 (46%), Gaps = 9/377 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            +VA      + + G   ++  +++LI    K  +      ++  M+ N   PN     +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LIS  CK G+L     +   + GK  SP     T+LI  +    R+ E   L   M+  N
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +I + + Y++++    K  N   A  + +EM+++G   +++ Y   I   C  G++ EA 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 184 CLMQEMEN--------AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             M +++          G  P   T+  LI G  K   ++++   C +M++   LP+ + 
Sbjct: 586 EFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 645

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +   +  L   GN ++A  +  + L+ GF  N +TY+ LI G+ K G IQE  ++   M 
Sbjct: 646 YACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI 704

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              ISP   +Y+++I   C+ G L+EA K ++ M +  + P    Y  L+      G   
Sbjct: 705 DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELT 764

Query: 356 KALHLCEEMVSEGLKPS 372
           KA  L ++M+  G+KP+
Sbjct: 765 KAFELRDDMMRRGVKPN 781



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 165/377 (43%), Gaps = 43/377 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   +++ G + SL  +N LI+ + K  + D    ++ +M     +PN+ T   LI 
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           + CK G+L                                      +  L +M    +  
Sbjct: 399 SFCKRGKLDV-----------------------------------ALHFLGKMTEVGIKA 423

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               YS ++    K+  L +A  +++EM+  G   N  +YT+ I  YC+ G++  A  L 
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+ P   TF  LI G   A R+ E+     +M+   ++P+   +N +I   C+ 
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM--------EYKS 298
           GN  +A  +L   ++KG  P+  TY  LI G    G + E  +   ++        E + 
Sbjct: 544 GNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG 603

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P +  YT+LI+ LC+ G +++A+   + M + + +P  + Y   +     +GN  KA+
Sbjct: 604 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 663

Query: 359 HLCEEMVSEGLKPSTSY 375
            L + ++   L  + +Y
Sbjct: 664 QLHDVLLEGFLANTVTY 680



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 163/371 (43%), Gaps = 4/371 (1%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LFE   D  R   +  FS +L  F+ LI    ++ R      + + M++    P   T+ 
Sbjct: 129 LFESFLDSYR---KCNFSTTL-GFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLS 184

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +++ L +  Q +  + + D I      P V V T+++  + + +       ++ RM   
Sbjct: 185 GVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS 244

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y++ +    K + +  A+ +   +  +G  A+   Y T +   C+  + E  
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG 304

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +M EM   G  P +   + L++G  K   I  +     ++    + PS   +N +I  
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           +C+ G   +A  +      KG  PN++TYS LI  + K G++   L    +M    I  T
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y+SLIS  C+ GKL  A   F  M ++ L P V IY SL+  + ++G    A  L  
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 363 EMVSEGLKPST 373
           EM  +G+ P+T
Sbjct: 485 EMTGKGISPNT 495



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 9/328 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +  +G S +  +F  LI  +  ++R     +++  M+E    PNE T   LI 
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM-- 124
             CK G      ++LD +  K   P       LI  +    R+ E    +  +  +    
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 125 ------IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
                 + + + Y+ ++    K+  ++ A ++  EML      N   Y  F+      G 
Sbjct: 599 NEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 658

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           IE+A   + ++   G      T+N+LI G  K  RI+E+      M+   + P C +++ 
Sbjct: 659 IEKA-IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 717

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C  G+ K+A  +    L++G +P+ + Y+ LI G    GE+ +  +L  +M  + 
Sbjct: 718 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 777

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + P    Y SLI   C    +     YF
Sbjct: 778 VKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 1/213 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++  LI+ + K    D    + + ML +   PN+ T    +  L   G ++  + + 
Sbjct: 607 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH 666

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +     +  V  N  LI    +  RI+E   +L  M+   +  D I+YS I+Y   + 
Sbjct: 667 DVLLEGFLANTVTYNI-LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 725

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L+ A+ ++E ML RG + ++  Y   I   C  G++ +A  L  +M   G+KP   T+
Sbjct: 726 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 785

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           N LI G      +  +  Y    ++   L SCS
Sbjct: 786 NSLIHGTCLMSSVSSTADYFSCKLNWCFLLSCS 818



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/337 (18%), Positives = 136/337 (40%), Gaps = 34/337 (10%)

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM------- 119
             C     Q    + D + G + S  V +N S I + ++   +E+  VL++ +       
Sbjct: 21  TFCASPDSQFVACLTDIVRGNQ-SWRVALNNSFISQTLKPHHVEK--VLIQTLDDSRLAL 77

Query: 120 -------LRKNMIHDTIAYSLIVYAKVK-----------------MRNLESALVVYEEML 155
                  L KN  H T ++ ++++A V+                   N E     + +  
Sbjct: 78  RFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSY 137

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           ++   + +  +   I  Y +  +  +   +++ M + G+ P   T + ++ G  + ++  
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            +L   ++++S  L P    +  ++R LCE  +  +A  ++      G   +  TY+  I
Sbjct: 198 MALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFI 257

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  K   + E +++   + YK +   +  Y +L+  LC+  + E  ++    M     V
Sbjct: 258 RGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV 317

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           P      +LV    +KGN   A  L  ++   G+ PS
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 190/372 (51%), Gaps = 2/372 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R FE A+ + + +  RG +L  + +  LI  + ++ +      +Y+ M  +   P+  T+
Sbjct: 71  RSFE-AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL 129

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I  L K G++   V +   +  +  +P  +V ++LI  + +  +++  + +L +M +
Sbjct: 130 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 189

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                DTI Y++++    K  ++E+A   ++EML+ G   + + Y   I  +C+ G  + 
Sbjct: 190 AFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 249

Query: 182 AN-CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           A+  L QE    G      T+  +++  AK K+IEE+++  E++ +    P+ + +N ++
Sbjct: 250 ASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALL 309

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G  ++A  +L   +D G +P+ +TY+ LI G  KE    E  KL+ EM  + ++
Sbjct: 310 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLA 369

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
                YT+LI  L Q GK+ +A   +K M SH  VP V    +++    + G    A+ +
Sbjct: 370 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 429

Query: 361 CEEMVSEGLKPS 372
            + M + GL P+
Sbjct: 430 FKSMEARGLAPN 441



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 153/313 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G ++ + ++  ++  + K+ + +    + + +  N   P  AT   L++ LCK G+L+  
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L +I    C+P V+  TSLI  + +E+R  E   L K M  + +  DT+ Y+ ++  
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRE 381

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            ++   +  A  VY+ M   G   +    +T I    + G+I  A  + + ME  GL P 
Sbjct: 382 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 441

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           +  ++ LI G  KA++++ +L    QM      P    +N +I  LC+ G+ + A     
Sbjct: 442 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 501

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L+ G  P+  TY+ LI G+ K G       ++ +M     S  +  Y +LIS LC+  
Sbjct: 502 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRR 561

Query: 318 KLEEADKYFKIMK 330
           +L +A  YF+ MK
Sbjct: 562 QLTKASLYFQHMK 574



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 161/355 (45%), Gaps = 38/355 (10%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P  AT   L++ LCK G+L+  +D+L +I    C+P V+  TSLI  + +E+R  E   L
Sbjct: 19  PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            K M  + +  DT+ Y+ ++   ++   +  A  VY+ M   G   +    +T I    +
Sbjct: 79  FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+I  A  + + ME  GL P +  ++ LI G  KA++++ +L    QM      P    
Sbjct: 139 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 198

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG------------- 282
           +N +I  LC+ G+ + A       L+ G  P+  TY+ LI G+ K G             
Sbjct: 199 YNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQET 258

Query: 283 -----------------------EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
                                  +I+E + L  ++     +PT+  Y +L++ LC+ G+L
Sbjct: 259 TINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 318

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EEA    + +  +   P V  Y SL+ G+  EK    +A  L +EM   GL   T
Sbjct: 319 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK-RSFEAYKLFKEMALRGLALDT 372



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 161/368 (43%), Gaps = 1/368 (0%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            A  + + +E RG + + + ++ LIH + K+ + D    +   M +    P+  T   LI
Sbjct: 144 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLI 203

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LCK G ++      D +    C P V     LI    +    +     L +    N  
Sbjct: 204 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGC 263

Query: 126 H-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ IV    K + +E A+ + E++   G +     Y   +   C+ G++EEA  
Sbjct: 264 TIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAID 323

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++++ + G  P   T+  LI+G  K KR  E+    ++M  R L      +  +IR L 
Sbjct: 324 LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELL 383

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   QA+ +       G  P+ +T S +I G +K G I   ++++  ME + ++P   
Sbjct: 384 QTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEV 443

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y++LI  LC+  K++ A +    MK     P    Y  L+    + G+   A    +EM
Sbjct: 444 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 503

Query: 365 VSEGLKPS 372
           +  G KP 
Sbjct: 504 LEAGCKPD 511



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 166/381 (43%), Gaps = 38/381 (9%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++   +++   +   I++N LI  + KS   +     +  MLE    P+  T 
Sbjct: 175 RKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 234

Query: 62  RTLISALCKGG--------------------QLQTY----------------VDMLDRIH 85
             LIS  CK G                     + TY                V ++++I 
Sbjct: 235 NILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKIT 294

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
              C+P +    +L+  + +  R+EE + LL++++      D + Y+ ++    K +   
Sbjct: 295 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 354

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +++EM  RG + ++  YT  I    + GKI +A+ + + M + G  P   T + +I
Sbjct: 355 EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 414

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF- 264
           +G +KA RI  ++   + M +R L P+   ++ +I  LC+      A  ML   + K F 
Sbjct: 415 DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA-QMKKAFC 473

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+ ITY+ LI G  K G+++     + EM      P +  Y  LIS  C+ G  + A  
Sbjct: 474 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 533

Query: 325 YFKIMKSHSLVPGVDIYESLV 345
            F  M S      V  Y +L+
Sbjct: 534 VFDDMSSSRCSANVVTYGALI 554



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 149/312 (47%), Gaps = 19/312 (6%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +++  V ++++I    C+P +    +L+  + +  R+EE + LL++++      D + Y+
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K +    A  +++EM  RG + ++  YT  I    + GKI +A+ + + M + 
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P   T + +I+G +KA RI  ++   + M +R L P+   ++ +I  LC+      A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 253 NGMLTLALDKGF-SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             ML   + K F +P+ ITY+ LI G  K G+++     + EM      P +  Y  LIS
Sbjct: 181 LEMLA-QMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH--------LEKGNK-AKALHLCE 362
             C+ G  + A        SHSL     I    + IH        L K  K  +A+ L E
Sbjct: 240 GFCKAGNTDAA--------SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALME 291

Query: 363 EMVSEGLKPSTS 374
           ++ + G  P+ +
Sbjct: 292 KITANGCTPTIA 303



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 111/226 (49%), Gaps = 1/226 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R FE A+ + + +  RG +L  + +  LI  + ++ +      +Y+ M  +   P+  T+
Sbjct: 352 RSFE-AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL 410

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I  L K G++   V +   +  +  +P  +V ++LI  + +  +++  + +L +M +
Sbjct: 411 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 470

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                DTI Y++++    K  ++E+A   ++EML+ G   + + Y   I  +C+ G  + 
Sbjct: 471 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 530

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           A  +  +M ++       T+  LI G  K +++ ++  Y + M  R
Sbjct: 531 ACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKER 576



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 82/187 (43%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V + +   G    +++ +T+I  ++K+ R     RI++ M      PNE     LI 
Sbjct: 391 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 450

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  ++   ++ML ++    C+P  I    LI  + +   +E        ML      
Sbjct: 451 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    K  N ++A  V+++M     SAN   Y   I   C+  ++ +A+   
Sbjct: 511 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYF 570

Query: 187 QEMENAG 193
           Q M+  G
Sbjct: 571 QHMKERG 577


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 163/330 (49%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
            R ++ M  N   PN  T  T+I   CK  +       L  +  K   P +I    +I  
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           + ++ R++E   +L  M RK  + D + Y+ +V    K  N   ALV++ EM++ G S N
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              YT+ I + C+ G +  A     +M   GL P + T+  +I G A+   ++E+     
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M     +PS   +N +I   C  G  ++A G+L   + KG  P+ ++YS +I G+A+  
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           E+    ++  EM  KS+ P    Y+SLI  LC+  +L EA   F+ M +  L P    Y 
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+  + ++G+  KALHL +EM+ +G  P 
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPD 332



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 172/417 (41%), Gaps = 50/417 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF   R +  +G   +LI+FN +I+ + +  R      +   M      P+E T  TL++
Sbjct: 37  AFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVN 96

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G     + +   +     SP V+  TSLI  + +   +   M    +M  + +  
Sbjct: 97  GYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCP 156

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ I+    +   L+ A  V  EM + GF  +   Y   I  +C  G++EEA  L+
Sbjct: 157 NERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLL 216

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           Q+M   G+ P   +++ +I G A+ + ++ +     +M+ + +LP    ++ +I+ LCE 
Sbjct: 217 QDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQ 276

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  M    L     P+E TY+ LI  Y KEG++ + L L+ EM  K   P    Y
Sbjct: 277 RRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTY 336

Query: 307 TSLISSL--------------------------------------------------CQC 316
             LI+ L                                                  C  
Sbjct: 337 NVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMK 396

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G ++EAD+ F+ M + +  P   IY  ++  H   GN  KA  L +EMV     P T
Sbjct: 397 GLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHT 453



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 173/379 (45%), Gaps = 17/379 (4%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG   +  ++ T+I+   +    D  +R+   M  +   P+  T   LI+  C  G+++ 
Sbjct: 152 RGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEE 211

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +L  + GK   P V+  +++I    + + ++    +   M+ K+++ D + YS ++ 
Sbjct: 212 AIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQ 271

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              + R L  A  +++EML      + F YTT I AYC+ G + +A  L  EM   G  P
Sbjct: 272 GLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLP 331

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC---------- 246
              T+N+LI G  K  R +E+     ++     +PS   +N +I   C            
Sbjct: 332 DAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVK 391

Query: 247 -----GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                G   +A+ +    ++K   PNE  Y+ +I G+ + G + +  KLY EM +    P
Sbjct: 392 GFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVP 451

Query: 302 TLPAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
                 +L+ +L   G   E ++    I++S  L    ++ + LV I+ ++GN     +L
Sbjct: 452 HTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDA-ELSKVLVEINQKEGNMDMVFNL 510

Query: 361 CEEMVSEGLKPSTSYLCSA 379
             EM  +GL PST    +A
Sbjct: 511 LTEMAKDGLIPSTGTPTNA 529



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%)

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
           G+   K M R   + + + Y+ ++    K++  + A      M  +G   N   +   I 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             C  G+++E + ++ EM   G  P + T+N L+ G  K     ++L    +M+   L P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +   +  +I  +C+ GN  +A         +G  PNE TY+ +I G+A++G + E  ++ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            EM      P++  Y +LI+  C  G++EEA    + M    ++P V  Y +++      
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
               +A  +  EM+ + + P 
Sbjct: 242 QELDRAFQMKVEMIGKSVLPD 262


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 159/315 (50%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           AT    I  LCK  ++   V++ + +  K     V    +L+L + + E  E G  ++  
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+    +    A S +V    K  N+ SA  +  ++ K G + + FVY   I + C+ GK
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++EA  L   M + GL P D T+++LI+   K  +++ +L +  +M    +  +   ++ 
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C+ G  + A  +    +  G  PN + Y+ LI GY KEGE+    +LY+EM  K 
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           ISP    +T+LIS LC   ++ EA+K F  M   +++P    Y  L+  H ++GN  +A 
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 359 HLCEEMVSEGLKPST 373
            L +EMV +GL P T
Sbjct: 551 ELLDEMVEKGLVPDT 565



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 173/368 (47%), Gaps = 1/368 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R++E A ++   L  +G    + ++ TL+  + K +  +    +   M+E    P+EA +
Sbjct: 265 RVWE-AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV 323

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  L K G + +  D+++++     +P + V  +LI  + ++ +++E   L   M  
Sbjct: 324 SNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  + + YS+++ +  K   L+ AL    +M + G  A  + Y++ I  +C+ GK+  
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L  EM   GLKP    +  LI G  K   +  +     +M  + + P+   F  +I 
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALIS 503

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC      +AN +    ++    PNE+TY+ LI G+ KEG      +L  EM  K + P
Sbjct: 504 GLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVP 563

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y  LIS LC  G++ EA ++   ++          + +L+  + ++G    AL  C
Sbjct: 564 DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDAC 623

Query: 362 EEMVSEGL 369
            EM+  G+
Sbjct: 624 REMLGRGV 631



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 166/367 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   +++ G + SL  +N LI+ + K  + D    ++ +M     +PN+ T   LI 
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           + CK G+L   +  L ++        V   +SLI    +  ++     L   M+   +  
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K   L +A  +Y EM  +G S N++ +T  I   C   ++ EAN L 
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM    + P + T+N+LIEG  K      +    ++M+ + L+P    +  +I  LC  
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A   +     +    NE+ +S L+ GY KEG + + L    EM  + ++  L  Y
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCY 638

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + LI  + +           K M    L P   +Y +++  + + GN   A  L + MVS
Sbjct: 639 SVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVS 698

Query: 367 EGLKPST 373
           EG  P+ 
Sbjct: 699 EGCLPNV 705



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 172/372 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            +VA      + + G   ++  +++LI    K  +      ++  M+ N   PN     +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LIS  CK G+L     +   + GK  SP     T+LI  +    R+ E   L   M+  N
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +I + + Y++++    K  N   A  + +EM+++G   +++ Y   I   C  G++ EA 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             M +++    K  +  F+ L+ G  K  R++++L  C +M+ R +      ++ +I  +
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
               + +    +L    D+G  P+ + Y+ +I   AK G ++    L+  M  +   P +
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNV 705

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT+LI+ LC+ G +++A+   + M + + +P  + Y   +     +GN  KA+ L + 
Sbjct: 706 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDV 765

Query: 364 MVSEGLKPSTSY 375
           ++   L  + +Y
Sbjct: 766 LLEGFLANTVTY 777



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 175/349 (50%), Gaps = 1/349 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++N LI    K       + +   M+E    P+  T R LIS LC  G++    + ++ 
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + G++     +  ++L+    +E R+++ +   + ML + +  D + YS+++Y  ++ ++
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             S + + ++M  +G   ++ +YTT I A  + G ++ A  L   M + G  P   T+  
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTA 710

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  K   ++++   C +M++   LP+ + +   +  L   GN ++A  +  + L+ G
Sbjct: 711 LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-G 769

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           F  N +TY+ LI G+ K G IQE  ++   M    ISP   +Y+++I   C+ G L+EA 
Sbjct: 770 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 829

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K ++ M +  + P    Y  L+      G   KA  L ++M+  G+KP+
Sbjct: 830 KLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 878



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 163/371 (43%), Gaps = 4/371 (1%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LFE   D  R   +  FS +L  F+ LI    ++ R      + + M++    P   T+ 
Sbjct: 129 LFESFLDSYR---KCNFSTTL-GFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLS 184

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +++ L +  Q +  + + D I      P V V T+++  + + +       ++ RM   
Sbjct: 185 GVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESS 244

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y++ +    K + +  A+ +   +  +G  A+   Y T +   C+  + E  
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG 304

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +M EM   G  P +   + L++G  K   I  +     ++    + PS   +N +I  
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           +C+ G   +A  +      KG  PN++TYS LI  + K G++   L    +M    I  T
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y+SLIS  C+ GKL  A   F  M ++ L P V IY SL+  + ++G    A  L  
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 363 EMVSEGLKPST 373
           EM  +G+ P+T
Sbjct: 485 EMTGKGISPNT 495



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 34/292 (11%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           NE     L+   CK G+L   +D    + G+  +  ++  + LI  I++++     + LL
Sbjct: 599 NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLL 658

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           K+M  + +  D + Y+ ++ A  K  NL+ A  +++ M+  G   N   YT  I   C+ 
Sbjct: 659 KQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKI 718

Query: 177 GKIEEANCLMQEMENAGLKPYDETF----------------------------------N 202
           G +++A  L +EM  +   P   T+                                  N
Sbjct: 719 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYN 778

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +LI G  K  RI+E+      M+   + P C +++ +I   C  G+ K+A  +    L++
Sbjct: 779 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 838

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           G +P+ + Y+ LI G    GE+ +  +L  +M  + + P    Y SLI   C
Sbjct: 839 GVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 36/273 (13%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           A D CR +  RG ++ L+ ++ LI+ ++ + DR  ++  + Q   + +R P+     T+I
Sbjct: 619 ALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR-PDNVLYTTMI 677

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-- 123
            A  K G L+    + D +  + C P V+  T+LI  + +   +++  +L + ML  N  
Sbjct: 678 DANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL 737

Query: 124 -----------------------MIHD---------TIAYSLIVYAKVKMRNLESALVVY 151
                                   +HD         T+ Y++++    K+  ++ A  V 
Sbjct: 738 PNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVL 797

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
             M+  G S +   Y+T I  YC  G ++EA  L + M N G+ P    +N LI GC   
Sbjct: 798 VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVT 857

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             + ++    + MM R + P+ + +N +I   C
Sbjct: 858 GELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/337 (18%), Positives = 136/337 (40%), Gaps = 34/337 (10%)

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM------- 119
             C     Q    + D + G + S  V +N S I + ++   +E+  VL++ +       
Sbjct: 21  TFCASPDSQFVACLTDIVRGNQ-SWRVALNNSFISQTLKPHHVEK--VLIQTLDDSRLAL 77

Query: 120 -------LRKNMIHDTIAYSLIVYAKVK-----------------MRNLESALVVYEEML 155
                  L KN  H T ++ ++++A V+                   N E     + +  
Sbjct: 78  RFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSY 137

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           ++   + +  +   I  Y +  +  +   +++ M + G+ P   T + ++ G  + ++  
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFR 197

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            +L   ++++S  L P    +  ++R LCE  +  +A  ++      G   +  TY+  I
Sbjct: 198 MALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFI 257

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  K   + E +++   + YK +   +  Y +L+  LC+  + E  ++    M     V
Sbjct: 258 RGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFV 317

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           P      +LV    +KGN   A  L  ++   G+ PS
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 172/371 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + ++A D+   +   G   SL++FNT+I+++ K  R      I  H+     YPN  T  
Sbjct: 182 MVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYT 241

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +LI   C+   L     M DR+    C P  +  ++LI  +  E R+EE M +L+ M++K
Sbjct: 242 SLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK 301

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +      Y++ + +         A+ +  +M KRG   N   +T  I      GK E A
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  +M   GL P   T+N LI       R E + +  + M+S   LPS   +NE+I+ 
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C  G+ ++A  +    L  G SPN ITY+ LI GY K+G +   ++L   M+   + P 
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YT LIS   + GKLE A   F  M  H + P    Y +++  +        AL L  
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541

Query: 363 EMVSEGLKPST 373
           +MV  G  PS+
Sbjct: 542 KMVESGNLPSS 552



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 2/361 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG   ++ +F  LI  +++  + ++   +Y  ML +   P   T   LI+ LC  G+
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +T   +   +      P       +I        I++ MV+  +ML+     + I Y+ 
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++Y   K  NL +A+ + E M   G   +++ YT  I  +   GK+E A  L   M   G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+  +I+G     +++++L+   +M+    LPS   +N MI    +  +  +A 
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 + +G  PN ITY+  I G  + G      K+++EME ++  P L  Y+SLI  L
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632

Query: 314 CQCGKLEEADKY--FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           CQ G+ E+A+ Y     +  +   P VD Y +LV     +G   +A  L   M  +GL+P
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 372 S 372
           S
Sbjct: 693 S 693



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 162/344 (47%), Gaps = 2/344 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE+A  +   +   G   + +++N LI+ +    R +  + I++ ML +   P+  T   
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C  G +Q  + + D++     SP VI   +LI    ++  +   M LL+ M    
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   Y+ ++    +   LE A  ++  M++ G S N   YT  I  Y    K+++A 
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M  +G  P  +T+N++I G +K   I E+ ++C +M+ + LLP+   +   I  L
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG--EIQEVLKLYYEMEYKSISP 301
           C  G    A  +      + + PN  TYS LI G  +EG  E  E+  L   + +    P
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +  YT+L+  LC  G+  EAD+    M+   L P  +IY +L+
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 162/369 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++AF +   + + G   + ++++TLI+ +    R +    + + M++    P   T   
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            + +LC  G     V++L ++  + C P +   T+LI  + ++ + E  + L  +ML   
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++  T+ Y+ ++         E+A  +++ ML  G   ++  Y   I  +C  G I++A 
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M  AG  P   T+N LI G  K   +  ++   E M    L P    + E+I   
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G  + A  +    ++ G SPN +TY+ +I GY    ++ + L L+++M      P+ 
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +IS   +   + EA+ +   M    L+P V  Y S +      G    A  +  E
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612

Query: 364 MVSEGLKPS 372
           M      P+
Sbjct: 613 MEKRNYFPN 621



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 2/316 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G S ++I++NTLI+   K    +   R+ + M  N   P+  T   LIS   +GG+L+
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +   +     SP  +  T++I       ++++ + L  +M+    +  +  Y++++
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  ++  A     +M+K+G   N   YT+FI   C  G+   A  +  EME     
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619

Query: 196 PYDETFNLLIEGCAKAKRIEESLSY--CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           P   T++ LI G  +  R E++  Y    ++      P+   +  +++ LC  G   +A+
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++     KG  P+E  Y  L+ G  K  +++  L ++Y M+       L  Y +LI +L
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739

Query: 314 CQCGKLEEADKYFKIM 329
           C+   +EEA   F+ M
Sbjct: 740 CKENFIEEAQCIFQTM 755



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM------ 186
           LI   K  M +L  A  +Y +ML  G   +   + T I   C+ G+++EA  +M      
Sbjct: 174 LIQLGKFDMVDL--ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRY 231

Query: 187 -----------------------------QEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
                                          M   G  P   T++ LI G     R+EE+
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEA 291

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   E+M+ + + P+   +   +  LC+ G + +A  +L     +G  PN  T++ LI G
Sbjct: 292 MDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISG 351

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            +++G+ +  + LY++M    + PT   Y +LI+ LC  G+ E A   FK M SH  +P 
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              Y  ++      G+  KA+ + ++M+  G  P+
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 97/208 (46%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           +TT +    ++  ++ A  +  +M N+G++P   TFN +I    K  R++E+      + 
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                P+   +  +I   C   N   A  M    +  G  PN +TYS LI G   EG ++
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E + +  EM  K I PT+  YT  + SLC  G   EA +    MK    VP +  + +L+
Sbjct: 290 EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALI 349

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
                 G    A+ L  +M+++GL P+T
Sbjct: 350 SGLSRDGKFEIAIGLYHKMLADGLVPTT 377



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 14/306 (4%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G S + +++  +I       + D    ++  M+E+   P+  T   +IS   K   + 
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              +   ++  +   P VI  TS I  + +  R      +   M ++N   +   YS ++
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629

Query: 136 YA--------KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           Y           +M NL + L  Y      G   N   YTT +   C  G+  EA+ L+ 
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHY------GCEPNVDTYTTLVKGLCGEGRCYEADQLVV 683

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            M+  GL+P +E +  L+ G  K  ++E +L+    M +       S +  +I  LC+  
Sbjct: 684 SMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKEN 743

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             ++A  +    L+K ++ +E+ ++ L+ G  KEGE    LKL + ME ++ +     Y 
Sbjct: 744 FIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYV 803

Query: 308 SLISSL 313
            L   L
Sbjct: 804 MLAREL 809


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 174/351 (49%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF LS +S N ++  + K  R  +V  +Y+ M+      N  T   +I+ LCK G+ Q  
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+++ +     SP VI   ++I    +  ++ +   LLK M+ K +  + I +++++  
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +  N+ +A  V+EEM ++G   N   Y + I   C  GK++EA  L  +M   GLKP 
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI G  K K ++E+    + +  R L P+   FN +I    + G    A  + +
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + LD G  PN  TY+ LI G+ +EG ++E  KL  EME   +   L  Y  L+ +LC+ G
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +  +A +    M    L P    Y +L+  +  +GN   AL++   M  +G
Sbjct: 489 ETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 167/349 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A DV   ++  GFS S+I++NT+I    K+ +      + + M+    +PNE T   
Sbjct: 245 FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C+   +     + + +  +   P V+   SLI  +    +++E + L  +M    
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ ++    K + L+ A  + +++ KRG + N   + T I AY + G++++A 
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M + G+ P   T+N LI G  +   ++E+    ++M    L      +N ++  L
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  +L    + G +P+ +TY+ LI GY +EG     L +   ME K     +
Sbjct: 485 CKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANI 544

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
             Y  LI   C  GKLEEA++    M    L+P    Y+ L    +EKG
Sbjct: 545 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 160/321 (49%), Gaps = 14/321 (4%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRI--HGKR-----CSPMVIVNTSLILRIIQEERI 109
           N   +  L+ A  K G++   ++  DR   +G R     C+PM++        +++E RI
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLV-------SLVKEGRI 210

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
                + K M+R+ +  + + + +++    K+   + A  V E+M   GFS +   Y T 
Sbjct: 211 GVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTI 270

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  YC+ GK+ +A+ L++EM    + P + TFN+LI+G  + + +  +    E+M  + L
Sbjct: 271 IDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGL 330

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P+   +N +I  LC  G   +A G+       G  PN +TY+ LI G+ K+  ++E  +
Sbjct: 331 QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEARE 390

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           +  ++  + ++P +  + +LI +  + G++++A     +M    + P V  Y  L+    
Sbjct: 391 MLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC 450

Query: 350 EKGNKAKALHLCEEMVSEGLK 370
            +GN  +A  L +EM   GLK
Sbjct: 451 REGNVKEARKLAKEMEGNGLK 471



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 144/303 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I+FN LI    + +      ++++ M      PN  T  +LI+ LC  G+L   + + D+
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK 359

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + G    P V+   +LI    +++ ++E   +L  + ++ +  + I ++ ++ A  K   
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A ++   ML  G   N   Y   I  +C  G ++EA  L +EME  GLK    T+N+
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L++   K     +++   ++M    L PS   +N +I      GN+  A  + TL   KG
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              N +TY+ LI G+  +G+++E  +L  EM  K + P    Y  L   + + G + + D
Sbjct: 540 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDID 599

Query: 324 KYF 326
            + 
Sbjct: 600 GHL 602



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 132/285 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++G   +++++N+LI+ +  + + D    +   M      PN  T   LI+  CK   
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+   +MLD I  +  +P VI   +LI    +  R+++  +L   ML   +  +   Y+ 
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +  N++ A  + +EM   G  A+   Y   + A C+ G+  +A  L+ EM   G
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N LI+G  +      +L+    M  +    +   +N +I+  C  G  ++AN
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 564

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            +L   L+KG  PN  TY  L     ++G I ++    Y +   S
Sbjct: 565 RLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNVSISS 609



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 119/246 (48%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           ++I   ++V+A VK   ++ AL  ++     GF  ++      + +  + G+I     + 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    +     TF+++I G  K  + +++    E M +    PS   +N +I   C+ 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A+ +L   + K   PNEIT++ LI G+ ++  +    K++ EM+ + + P +  Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI+ LC  GKL+EA      M    L P V  Y +L+    +K    +A  + +++  
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 367 EGLKPS 372
            GL P+
Sbjct: 398 RGLAPN 403


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 172/371 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + ++A D+   +   G   SL++FNT+I+++ K  R      I  H+     YPN  T  
Sbjct: 182 MVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYT 241

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +LI   C+   L     M DR+    C P  +  ++LI  +  E R+EE M +L+ M++K
Sbjct: 242 SLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK 301

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +      Y++ + +         A+ +  +M KRG   N   +T  I      GK E A
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  +M   GL P   T+N LI       R E + +  + M+S   LPS   +NE+I+ 
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C  G+ ++A  +    L  G SPN ITY+ LI GY K+G +   ++L   M+   + P 
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YT LIS   + GKLE A   F  M  H + P    Y +++  +        AL L  
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541

Query: 363 EMVSEGLKPST 373
           +MV  G  PS+
Sbjct: 542 KMVESGNLPSS 552



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 2/361 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG   ++ +F  LI  +++  + ++   +Y  ML +   P   T   LI+ LC  G+
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +T   +   +      P       +I        I++ MV+  +ML+     + I Y+ 
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++Y   K  NL +A+ + E M   G   +++ YT  I  +   GK+E A  L   M   G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+  +I+G     +++++L+   +M+    LPS   +N MI    +  +  +A 
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 + +G  PN ITY+  I G  + G      K+++EME ++  P L  Y+SLI  L
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632

Query: 314 CQCGKLEEADKY--FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           CQ G+ E+A+ Y     +  +   P VD Y +LV     +G   +A  L   M  +GL+P
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692

Query: 372 S 372
           S
Sbjct: 693 S 693



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 162/344 (47%), Gaps = 2/344 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE+A  +   +   G   + +++N LI+ +    R +  + I++ ML +   P+  T   
Sbjct: 358 FEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C  G +Q  + + D++     SP VI   +LI    ++  +   M LL+ M    
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   Y+ ++    +   LE A  ++  M++ G S N   YT  I  Y    K+++A 
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M  +G  P  +T+N++I G +K   I E+ ++C +M+ + LLP+   +   I  L
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG--EIQEVLKLYYEMEYKSISP 301
           C  G    A  +      + + PN  TYS LI G  +EG  E  E+  L   + +    P
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +  YT+L+  LC  G+  EAD+    M+   L P  +IY +L+
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 162/369 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++AF +   + + G   + ++++TLI+ +    R +    + + M++    P   T   
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            + +LC  G     V++L ++  + C P +   T+LI  + ++ + E  + L  +ML   
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++  T+ Y+ ++         E+A  +++ ML  G   ++  Y   I  +C  G I++A 
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M  AG  P   T+N LI G  K   +  ++   E M    L P    + E+I   
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G  + A  +    ++ G SPN +TY+ +I GY    ++ + L L+++M      P+ 
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +IS   +   + EA+ +   M    L+P V  Y S +      G    A  +  E
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612

Query: 364 MVSEGLKPS 372
           M      P+
Sbjct: 613 MEKRNYFPN 621



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 2/316 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G S ++I++NTLI+   K    +   R+ + M  N   P+  T   LIS   +GG+L+
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +   +     SP  +  T++I       ++++ + L  +M+    +  +  Y++++
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  ++  A     +M+K+G   N   YT+FI   C  G+   A  +  EME     
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619

Query: 196 PYDETFNLLIEGCAKAKRIEESLSY--CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           P   T++ LI G  +  R E++  Y    ++      P+   +  +++ LC  G   +A+
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++     KG  P+E  Y  L+ G  K  +++  L ++Y M+       L  Y +LI +L
Sbjct: 680 QLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICAL 739

Query: 314 CQCGKLEEADKYFKIM 329
           C+   +EEA   F+ M
Sbjct: 740 CKENFIEEAQCIFQTM 755



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 37/275 (13%)

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM------ 186
           LI   K  M +L  A  +Y +ML  G   +   + T I   C+ G+++EA  +M      
Sbjct: 174 LIQLGKFDMVDL--ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRY 231

Query: 187 -----------------------------QEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
                                          M   G  P   T++ LI G     R+EE+
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEA 291

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   E+M+ + + P+   +   +  LC+ G + +A  +L     +G  PN  T++ LI G
Sbjct: 292 MDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISG 351

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            +++G+ +  + LY++M    + PT   Y +LI+ LC  G+ E A   FK M SH  +P 
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPS 411

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              Y  ++      G+  KA+ + ++M+  G  P+
Sbjct: 412 TQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPN 446



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 97/208 (46%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           +TT +    ++  ++ A  +  +M N+G++P   TFN +I    K  R++E+      + 
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                P+   +  +I   C   N   A  M    +  G  PN +TYS LI G   EG ++
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E + +  EM  K I PT+  YT  + SLC  G   EA +    MK    VP +  + +L+
Sbjct: 290 EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALI 349

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
                 G    A+ L  +M+++GL P+T
Sbjct: 350 SGLSRDGKFEIAIGLYHKMLADGLVPTT 377



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 14/306 (4%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G S + +++  +I       + D    ++  M+E+   P+  T   +IS   K   + 
Sbjct: 510 EHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSIS 569

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              +   ++  +   P VI  TS I  + +  R      +   M ++N   +   YS ++
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLI 629

Query: 136 YA--------KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           Y           +M NL + L  Y      G   N   YTT +   C  G+  EA+ L+ 
Sbjct: 630 YGLCQEGRAEDAEMYNLLARLTHY------GCEPNVDTYTTLVKGLCGEGRCYEADQLVV 683

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            M+  GL+P +E +  L+ G  K  ++E +L+    M +       S +  +I  LC+  
Sbjct: 684 SMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKEN 743

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             ++A  +    L+K ++ +E+ ++ L+ G  KEGE    LKL + ME ++ +     Y 
Sbjct: 744 FIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYV 803

Query: 308 SLISSL 313
            L   L
Sbjct: 804 MLAREL 809


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 188/383 (49%), Gaps = 13/383 (3%)

Query: 11  CRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           C+ LE+   RG + + +++NTL++ +    R+   + + + M  N   P   T   +I  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 68  LCKGGQLQTYVDMLDRIH--GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           LCK G+++    ++D +       SP VI   S++  + +E+RI +   + KR L +   
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + + YS ++    KM  ++ AL +  +M++ G  AN+  Y+T +    + G++E+A  +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++M +AG  P   T+N LI+G  K +R+ E++    +M+     PS   +  +   LC 
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLP 304
            G   +A  +L     +G +PN ITYS ++ G  K G + E L  + +M     ++P + 
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY++LI  LC+ GK++EA ++ + M     +P V  +  L+    + G     L L   M
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGM 480

Query: 365 VSEGLKPS-------TSYLCSAS 380
              G  P           LC AS
Sbjct: 481 AERGCVPDMVTYATLVDRLCRAS 503



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 177/363 (48%), Gaps = 3/363 (0%)

Query: 4   FEVAFDVCR--YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
            E AF V    ++ + G S  +I+FN+++  + K  R      +++  LE    PN  T 
Sbjct: 187 IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 246

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI  L K  ++   + +L ++    C    +  ++++  +++  R+E+ +V+L++M  
Sbjct: 247 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 306

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              + D + Y+ ++    K + L  A+ +  EML+ GF  +   YTT     C  G+ +E
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 366

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL-PSCSAFNEMI 240
           A  ++  M   G  P   T++ +++G  KA R+ E+L Y E+M   +++ P   A++ +I
Sbjct: 367 AVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 426

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G   +A   L   +  G  P+ +T+S LI G    G I   L+L+  M  +   
Sbjct: 427 DGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCV 486

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +L+  LC+  +++EA   F+ M+S  L P      +++   LE      A  +
Sbjct: 487 PDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546

Query: 361 CEE 363
            +E
Sbjct: 547 QDE 549



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 162/347 (46%), Gaps = 3/347 (0%)

Query: 29  LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR 88
           +I  + KS + D    +++ M++   YP+  T   LI  L K  +++   D+ +    K 
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AYSLIVYAKVKMRNLESA 147
           C P V+   ++I  + +  RIE  + L   M        T+  YS ++    +   ++  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             + EEM  RG + N+  Y T + A    G+ +EA  L+++M   G  P   TF L+I+G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 208 CAKAKRIEESLSYCEQM--MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
             K   IE +    ++M  +   L P    FN ++  LC+      A+ +   AL++G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN +TYS LI G +K  ++ E L+L  +M           Y++++  L + G++E+A   
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + M+    +P    Y +L+    ++    +A+ L  EM+  G  PS
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 347


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 183/372 (49%), Gaps = 1/372 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++  + L QRG+  +   FN +IH      +      ++  M +    P+  +   L+ 
Sbjct: 267 AWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVD 326

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G + T   ML  +     +P ++  +SL+  + +  R+E    L KR+  +   H
Sbjct: 327 GLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKH 386

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS++++   +  +LE    ++ +M+   F  +++ Y++ I AYC + +++EA  + 
Sbjct: 387 DHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVF 446

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M + G+ P   T  +L+ G +    I E+  + +++    ++PS   +  +I  LC+ 
Sbjct: 447 ELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKV 506

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                  G+    + +G+ P+ + YS +I G+ K  ++QE  +LYY+M  +   P +  Y
Sbjct: 507 NKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTY 566

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI+ LC   KL E    FK M    L P   +Y SL+  + ++ N   AL +  EM +
Sbjct: 567 TSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMET 626

Query: 367 EGLKP-STSYLC 377
           EGL   S  Y C
Sbjct: 627 EGLSADSFVYTC 638



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 153/332 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF++ + L+ +GF    I ++ ++H   +    ++ + ++  M+ +   P+     +L
Sbjct: 370 ELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSL 429

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A C+  QL+  +++ + +      P V+  T L+     E  I E  + L ++ +  +
Sbjct: 430 IYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGV 489

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           +     Y +I++   K+        ++ +M+KRG+  ++ +Y+  I  + +   ++EA  
Sbjct: 490 VPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFR 549

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M + G KP   T+  LI G     ++ E ++  + M+   L P    +  +I   C
Sbjct: 550 LYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYC 609

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  N K A  +      +G S +   Y+ LIGG++K   +        EM  K ++PT+ 
Sbjct: 610 KRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVV 669

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            YT LI    + G  ++A   +  M    + P
Sbjct: 670 TYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAP 701



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 156/360 (43%), Gaps = 35/360 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G + +L+S+++L+H                                    LC+ G+
Sbjct: 344 MARNGITPNLVSYSSLLH-----------------------------------GLCRAGR 368

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++  R+  +      IV + ++    Q   +E    L   M+  N + D   YS 
Sbjct: 369 VELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSS 428

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++YA  + R L+ AL V+E M+  G   N    T  +  +   G I EA   + ++   G
Sbjct: 429 LIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFG 488

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+ ++I G  K  +  +       M+ R  +P    ++ +I    +  + ++A 
Sbjct: 489 VVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAF 548

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    +D+G  PN  TY+ LI G   + ++ EV+ L+  M  + ++P    YTSLI+  
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACY 608

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+   ++ A + F+ M++  L     +Y  L+G   +      A    EEM+++GL P+ 
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTV 668



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 116/246 (47%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+  +Y     + ++SA    + + +RG+  N++ +   I  +C  G++ +A  + 
Sbjct: 247 NAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVF 306

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M+  G  P   ++++L++G  K   +        +M    + P+  +++ ++  LC  
Sbjct: 307 DGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRA 366

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A  +     D+GF  + I YS ++ G  +  +++    L+ +M + +  P    Y
Sbjct: 367 GRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNY 426

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +SLI + C+  +L+EA + F++M S  + P V     LV     +G   +A    +++  
Sbjct: 427 SSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQ 486

Query: 367 EGLKPS 372
            G+ PS
Sbjct: 487 FGVVPS 492



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/157 (17%), Positives = 73/157 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +   G   ++ ++ +LI+ +   D+   V  +++HM+     P+     +LI+
Sbjct: 547 AFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIA 606

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK   ++  +++   +  +  S    V T LI    +   ++   + ++ M+ K +  
Sbjct: 607 CYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTP 666

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
             + Y+ ++    K+ + + A+ +Y  ML+ G + ++
Sbjct: 667 TVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDA 703


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 190/412 (46%), Gaps = 36/412 (8%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LF+ A       ++ GF + L+  N L+  + K+++ +L WR Y  MLE     +  T  
Sbjct: 181 LFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYT 240

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+A  + G  +    +L  +  K CSP ++    +I  + +   ++E   L K M +K
Sbjct: 241 HLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKK 300

Query: 123 NMIHDTIAYSLIV--YAKVK-------------------------------MRNLES--A 147
            ++ D   YS+++  + K K                               MR  +S  A
Sbjct: 301 GLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEA 360

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             V EEML RG   N F Y   +   C++G +E+A+ L+ EM   G+KP  +T+N +IEG
Sbjct: 361 FRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEG 420

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K +          +M    L+P+      +I  LC  G+ + A+ +  + +  G  PN
Sbjct: 421 YLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPN 480

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            + Y+ LI G+ +EG  QE +++   M+ K + P +  Y S+I  LC+  K+EEA  Y  
Sbjct: 481 AVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLV 540

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
            M    L P V  Y +L+  + + G    A    +EM+  G+ P+   +C+A
Sbjct: 541 EMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPN-DVVCTA 591



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 177/361 (49%), Gaps = 3/361 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N +I    K      V  +   M ++   P   T   +I+ LC+ G ++    + + +
Sbjct: 413 TYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIM 472

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P  ++ T+LI   +QE R +E + +LK M +K +  D + Y+ ++    K R +
Sbjct: 473 VSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKM 532

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A     EM++RG   N + Y   I  YC+ G+++ A+   +EM   G+ P D     L
Sbjct: 533 EEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTAL 592

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K     E+ S    M+ R + P    ++ +I  L   G  + A  +L+  L+KG 
Sbjct: 593 IDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGL 652

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  TY+ +I G+ K+G I +  +L+  M  K ISP +  Y +LI+ LC+ G++E A +
Sbjct: 653 VPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARE 712

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA--STC 382
            F  +    L      Y +++  + + GN +KA  L +EM  +G+ P  S++ SA    C
Sbjct: 713 LFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPD-SFVYSALIDGC 771

Query: 383 R 383
           R
Sbjct: 772 R 772



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 176/371 (47%), Gaps = 1/371 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A D    + +RG   ++ ++  LIH   KS    +  R ++ ML     PN+   
Sbjct: 530 RKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVC 589

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   CK G       +   + G+   P V   ++LI  +++  +++  M LL   L 
Sbjct: 590 TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE 649

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K ++ D   Y+ I+    K   +  A  ++E M ++G S N   Y   I   C+ G+IE 
Sbjct: 650 KGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIER 709

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L   +   GL     T+  +I+G  K+  + ++    ++M  + + P    ++ +I 
Sbjct: 710 ARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALID 769

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              + GN ++A  +   ++ KGF+    + + L+ G+ K G++ E  +L  +M  K + P
Sbjct: 770 GCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKP 828

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               YT LI   C+ G L+EA+++F  M+  +L+P    Y +L+  +   G +++   L 
Sbjct: 829 DHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALF 888

Query: 362 EEMVSEGLKPS 372
           +EM+++ ++P 
Sbjct: 889 DEMIAKDIEPD 899



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 169/356 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G     +++  LI    +   +   +R+ + ML      N  T   L+  +CK G ++ 
Sbjct: 335 KGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEK 394

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L+ +      P      ++I   ++E+       LL  M + N++       +I+ 
Sbjct: 395 ADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIIN 454

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +  ++E A  V+E M+  G   N+ +YTT I  + + G+ +EA  +++ M+  G++P
Sbjct: 455 GLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQP 514

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +N +I G  K++++EE+  Y  +M+ R L P+   +  +I   C+ G  + A+   
Sbjct: 515 DVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYF 574

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L  G +PN++  + LI GY KEG   E   ++  M  +S+ P +  Y++LI  L + 
Sbjct: 575 KEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRN 634

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           GKL+ A +         LVP V  Y S++    ++G   KA  L E M  +G+ P+
Sbjct: 635 GKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPN 690



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 167/361 (46%), Gaps = 1/361 (0%)

Query: 16   QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            ++G    + ++N++I    K       ++++++M +    PN  T   LI+ LCK G+++
Sbjct: 649  EKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIE 708

Query: 76   TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               ++ D I GK  +   +   ++I    +   + +   L   M  K +  D+  YS ++
Sbjct: 709  RARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALI 768

Query: 136  YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                K  N E AL ++ E +++GF++ S +    +  +C+ GK+ EAN L+++M +  +K
Sbjct: 769  DGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGFCKSGKVIEANQLLEDMVDKHVK 827

Query: 196  PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
            P   T+ +LI+   K   ++E+  +   M  R L+P+   +  ++      G   +   +
Sbjct: 828  PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFAL 887

Query: 256  LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                + K   P+ +T+S +I  + KEG+  + LKL  +M  K  + +      LI  LC+
Sbjct: 888  FDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCR 947

Query: 316  CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
               + E  K  + ++   L   +    +LV    + G    A  + + MV     P ++ 
Sbjct: 948  KEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTE 1007

Query: 376  L 376
            L
Sbjct: 1008 L 1008



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 40/366 (10%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           R+++ M+     PN     TLI    + G+ Q  V +L  +  K   P V+   S+I+ +
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +  ++EE    L  M+ + +  +   Y  +++   K   ++ A   ++EML  G + N 
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 164 FVYTTFIGAYCEYGKIEEANC-----------------------------------LMQE 188
            V T  I  YC+ G   EA                                     L+ E
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
               GL P   T+N +I G  K   I ++    E M  + + P+   +N +I  LC+ G 
Sbjct: 647 FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            ++A  +      KG + N +TY+ +I GY K G + +  +L+ EM  K + P    Y++
Sbjct: 707 IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766

Query: 309 LISSLCQCGKLEEADKYF--KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           LI    + G  E+A   F   + K  +    ++   +L+    + G   +A  L E+MV 
Sbjct: 767 LIDGCRKEGNTEKALSLFLESVQKGFASTSSLN---ALMDGFCKSGKVIEANQLLEDMVD 823

Query: 367 EGLKPS 372
           + +KP 
Sbjct: 824 KHVKPD 829



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 8/177 (4%)

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN----AKQANGM 255
            F LLI+G  K    +E++S+         +      N ++  L +        +  NGM
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L+     +  TY+HLI  + + G  +E  +L +EME K  SP+L  Y  +I  LC+
Sbjct: 228 ----LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCR 283

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G+++EA +  K+M    LV  V  Y  L+    ++    +A  + EEM S+GLKP 
Sbjct: 284 AGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPG 340



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 44/104 (42%)

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           + +  LI GY K+G   E +  +   +       L     L+S L +  KLE   +++  
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M   +++  V  Y  L+  H   GN  +   L  EM  +G  PS
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPS 270


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 179/362 (49%), Gaps = 4/362 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF LS +S N ++  + K  R  +V  +Y+ M+      N  T   +I+ LCK G+ Q  
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+++ +     SP VI   ++I    +  ++ +   LLK M+ K +  + I +++++  
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +  N+ +A  V+EEM ++G   N   Y + I   C  GK++EA  L  +M   GLKP 
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI G  K K ++E+    + +  R L P+   FN +I    + G    A  + +
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + LD G  PN  TY+ LI G+ +EG ++E  KL  EME   +   L  Y  L+ +LC+ G
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488

Query: 318 KLEEADKYFK---IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-T 373
           +  +A +      +M+       +  Y  L+     KG   +A  L  EM+ +GL P+ T
Sbjct: 489 ETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRT 548

Query: 374 SY 375
           +Y
Sbjct: 549 TY 550



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 157/326 (48%), Gaps = 3/326 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A DV   ++  GFS S+I++NT+I    K+ +      + + M+    +PNE T   
Sbjct: 245 FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C+   +     + + +  +   P V+   SLI  +    +++E + L  +M    
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ ++    K + L+ A  + +++ KRG + N   + T I AY + G++++A 
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M + G+ P   T+N LI G  +   ++E+    ++M    L      +N ++  L
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484

Query: 244 CECGNAKQANGML---TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           C+ G  ++A  +L   TL   KG   N +TY+ LI G+  +G+++E  +L  EM  K + 
Sbjct: 485 CKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 544

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYF 326
           P    Y  L   + + G + + D + 
Sbjct: 545 PNRTTYDILRDEMMEKGFIPDIDGHL 570



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 3/278 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I+FN LI    + +      ++++ M      PN  T  +LI+ LC  G+L   + + D+
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK 359

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + G    P V+   +LI    +++ ++E   +L  + ++ +  + I ++ ++ A  K   
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A ++   ML  G   N   Y   I  +C  G ++EA  L +EME  GLK    T+N+
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 204 LIEGCAKAKRIEESLSYCEQM--MSRK-LLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           L++   K     +++   ++M  M +K    +   +N +I+  C  G  ++AN +L   L
Sbjct: 480 LVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 539

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +KG  PN  TY  L     ++G I ++    Y +   S
Sbjct: 540 EKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNVSISS 577



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 119/246 (48%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           ++I   ++V+A VK   ++ AL  ++     GF  ++      + +  + G+I     + 
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    +     TF+++I G  K  + +++    E M +    PS   +N +I   C+ 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A+ +L   + K   PNEIT++ LI G+ ++  +    K++ EM+ + + P +  Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI+ LC  GKL+EA      M    L P V  Y +L+    +K    +A  + +++  
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 367 EGLKPS 372
            GL P+
Sbjct: 398 RGLAPN 403


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 176/373 (47%), Gaps = 3/373 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  FE A  + + +  RGF+ S I+FNT+I  + K  +      I+  M +    P+  T
Sbjct: 485 MENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGIT 544

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            RTLI   CK   +     +   +  +  SP + +  SLI  + +  R+ E   LL  M 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMG 604

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y  ++    K   L+ A   Y EM + G SAN  + +T +      G+I+
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EAN LMQ+M + G  P  E F       A  ++I +SL   ++     LLP+   +N  I
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSL---DESCKTFLLPNNIVYNIAI 721

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G    A    ++   KGF P+  TY  LI GY+  G + E  +L  EM  + + 
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI+ LC+   ++ A + F  +    L P V  Y +L+  + + GN   A  L
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 841

Query: 361 CEEMVSEGLKPST 373
            ++M+ EG+ PS 
Sbjct: 842 KDKMIEEGISPSV 854



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 174/387 (44%), Gaps = 36/387 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SL S N+L++ + K+        +YQ M+     P+   +  +++A CK G++      +
Sbjct: 190 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 249

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK- 140
            ++      P ++   SLI   +    +E    +LK M  K +  + + Y+L++    K 
Sbjct: 250 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309

Query: 141 ---------MRNL--ESALV------------------------VYEEMLKRGFSANSFV 165
                    +R +  E+ALV                        + +EML+ G   N F+
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
             + I  YC+ G+I EA  ++  M +  LKP   ++N L++G  +     E+ + C++M+
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              + P+   +N +++ LC  G    A  +  L +  G +P+E+ YS L+ G  K    +
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFE 489

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
               L+ ++  +  + +   + ++IS LC+ GK+ EA++ F  MK     P    Y +L+
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + +  N  +A  +   M  E + PS
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPS 576



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 166/366 (45%), Gaps = 1/366 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRT 63
           E A  V +++ ++G S +++++  LI    K  + D   ++ + M E     P+E     
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C+ G++   V +LD +        + +  SLI    +   I E   ++ RM+  N
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D+ +Y+ ++    +  +   A  + ++ML+ G       Y T +   C  G  ++A 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M   G+ P +  ++ L++G  K +  E + +  + +++R    S   FN MI  L
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +     D G SP+ ITY  LI GY K   + +  K+   ME + ISP++
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSI 577

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SLIS L +  +L E       M    L P +  Y +L+    ++G   KA     E
Sbjct: 578 EMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFE 637

Query: 364 MVSEGL 369
           M   GL
Sbjct: 638 MTENGL 643



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 155/331 (46%), Gaps = 3/331 (0%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  R L++    G   +L   N+LI+   K         +   M++    P+  +  TL+
Sbjct: 350 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 409

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C+ G      ++ D++  +   P V+   +L+  + +    ++ + +   M++  + 
Sbjct: 410 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVA 469

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + YS ++    KM N E A  +++++L RGF+ +   + T I   C+ GK+ EA  +
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             +M++ G  P   T+  LI+G  KA  + ++      M    + PS   +N +I  L +
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFK 589

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +   +LT    +G +PN +TY  LI G+ KEG + +    Y+EM    +S  +  
Sbjct: 590 SRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 649

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            ++++S L + G+++EA+   + M  H   P
Sbjct: 650 CSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 174/357 (48%), Gaps = 1/357 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           R F+ S   F+ ++ V  +         ++ +M +  R P+  +  +L++ L K G+  T
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +  ++      P V + + ++    ++ +++E    +K+M    +  + + Y  ++ 
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLK 195
             V + ++E+A  V + M ++G S N   YT  I  YC+  K++EA  +++ M E A L 
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P +  + +LI+G  +  +I++++   ++M+   L  +    N +I   C+ G   +A G+
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +T  +D    P+  +Y+ L+ GY +EG   E   L  +M  + I PT+  Y +L+  LC+
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G  ++A + + +M    + P    Y +L+    +  N   A  L +++++ G   S
Sbjct: 450 VGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKS 506



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 157/335 (46%), Gaps = 11/335 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   +E+   S S+  +N+LI  + KS R      +   M      PN  T   LI 
Sbjct: 561 AFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALID 620

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI- 125
             CK G L         +     S  +I+ ++++  + +  RI+E  +L+++M+      
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680

Query: 126 -HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
            H+    S I YA ++   +  +L   +E  K     N+ VY   I   C+ GK+++A  
Sbjct: 681 DHECFLKSDIRYAAIQ--KIADSL---DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 735

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               +   G  P + T+  LI G + A  ++E+    ++M+ R L+P+   +N +I  LC
Sbjct: 736 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  N  +A  +      KG  PN +TY+ LI GY K G +    KL  +M  + ISP++ 
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
            Y++LI+ LC+ G +E + K    M    +  GVD
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQM----IKAGVD 886



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 121 RKNMIHDTIAY--SLIVYAKVKMRNLESALVVYEEMLK--RGFSANSFVYTTFIGAYCEY 176
           R  M  +T AY   L+   K K R      V+++E++   R F+ +  V+   +  Y E 
Sbjct: 114 RGRMYDETRAYLNQLVDLCKFKDR----GNVIWDELVGVYREFAFSPTVFDMILKVYVEK 169

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G  + A  +   M   G  P   + N L+    K      +    +QM+   ++P     
Sbjct: 170 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 229

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           + M+   C+ G   +A G +    + G  PN +TY  LI GY   G+++    +   M  
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSE 289

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKA 355
           K +S  +  YT LI   C+  K++EA+K  + M+   +LVP    Y  L+  +   G   
Sbjct: 290 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKID 349

Query: 356 KALHLCEEMVSEGLKPSTSYLCSA 379
            A+ L +EM+  GLK +  ++C++
Sbjct: 350 DAVRLLDEMLRLGLK-TNLFICNS 372



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 7/150 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + +RG   +++++N LI+ + KS+  D   R++  + +   +PN  T  TLI 
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G +     + D++  +  SP V+  ++LI  + +   IE  M LL +M++  +  
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             I Y  +V    K  N       Y EM K
Sbjct: 888 KLIEYCTLVQGGFKTSN-------YNEMSK 910



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 35/203 (17%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  +GF     ++ TLIH  + +   D  +R+   ML     PN  T   LI+ LCK   
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +  ++H                                   +K +  + + Y+ 
Sbjct: 800 VDRAQRLFHKLH-----------------------------------QKGLFPNVVTYNT 824

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+ N+++A  + ++M++ G S +   Y+  I   C++G IE +  L+ +M  AG
Sbjct: 825 LIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884

Query: 194 LKPYDETFNLLIEGCAKAKRIEE 216
           +      +  L++G  K     E
Sbjct: 885 VDSKLIEYCTLVQGGFKTSNYNE 907


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 191/418 (45%), Gaps = 51/418 (12%)

Query: 7   AFDVCRYLE-------QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           A D  R LE       + G + +++++NT+I+ + KS+       +++ ++E   +P+  
Sbjct: 14  AGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVV 73

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  TLI +LCK G L+    +   +  + C P V+  + LI  + +  RI+E   L++ M
Sbjct: 74  TYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 133

Query: 120 LRK------NMIH---------------------------------DTIAYSLIVYAKVK 140
            RK      N+I                                  DT+ +S ++    K
Sbjct: 134 TRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 193

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              ++ A  V+++M+  G+  N   Y   +   C+  K+E A+ +++ M + G+ P   T
Sbjct: 194 CGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVIT 253

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRK-----LLPSCSAFNEMIRRLCECGNAKQANGM 255
           +++L++   KA R++E+L     M SR      L+P    FN +I   C+ GN +QA+ +
Sbjct: 254 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               + K   P+ +T+  LI G  K G+++    +   M    + P +  Y +L+  LC+
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 373

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G++EEA ++ + M S   VP    Y SLV           AL L  E+ S G  P T
Sbjct: 374 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 431



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 157/331 (47%), Gaps = 5/331 (1%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S   ++F+TLI  + K  + D    ++  M+     PN  T   L++ LCK  +++    
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-----MIHDTIAYSLI 134
           M++ +  K  +P VI  + L+    +  R++E + LL  M  +      ++ D + ++++
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K  N E A  ++EEM+ +    +   +   I   C+ G++E A  ++  M N G+
Sbjct: 298 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+N L+ G  K+ RIEE+  + E+M+S   +P    +  ++  LC       A  
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +++     G+ P+ +TY+ L+ G  K G+ ++ + +  EM  K   P    + +  S L 
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLH 477

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + G L    +  +++ +  ++P      S++
Sbjct: 478 RSGNLAGTMELLRVVLAKGMLPDATTCSSIL 508



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 7/248 (2%)

Query: 131 YSLIVYAKVKMRNLESALVVYE-EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           Y++++ +  +  +   AL ++  EM + G +     Y T I   C+   +     L +E+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G  P   T+N LI+   KA  +EE+      M SR  +P+   ++ +I  LC+ G  
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 250 KQANGMLTLALDKGFS--PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS--ISPTLPA 305
            +A  ++     K     PN ITY+  + G  K+    E  +L   +   S  +SP    
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH-LCEEM 364
           +++LI  LC+CG+++EA   F  M +   VP V  Y +LV   L K +K +  H + E M
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVN-GLCKADKMERAHAMIESM 242

Query: 365 VSEGLKPS 372
           V +G+ P 
Sbjct: 243 VDKGVTPD 250



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/186 (17%), Positives = 85/186 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A D+   +   G   +++++N L+H + KS R +   +  + M+ +   P+  T  +L
Sbjct: 343 EAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSL 402

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + ALC+  +    + ++  +      P  +    L+  + +  + E+ + +L+ M+ K  
Sbjct: 403 VYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH 462

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D+  ++       +  NL   + +   +L +G   ++   ++ +   C  GK+++   
Sbjct: 463 QPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKA 522

Query: 185 LMQEME 190
           +++E E
Sbjct: 523 MIKEFE 528


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 170/356 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +I+++T+I+ + K     +  ++ + M E    PN     T+I +LCK   +   
Sbjct: 40  GHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEA 99

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D    +  +   P V   +S++       R+ E   L K+M+ +N+I + + +++++  
Sbjct: 100 MDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDG 159

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R +  A +V+E M ++G   + + Y   +  YC   +++EA  L   M+  G  P 
Sbjct: 160 LCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPN 219

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N+LI G  K+ RI+E+     +M  + L P    ++ ++R  C+ G  ++A  +L 
Sbjct: 220 VRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLK 279

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  PN ITYS ++ G  K G + E  +L   M+   I P +  YT LI  +C  G
Sbjct: 280 EMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFG 339

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           KLE A + F  +    + P V  Y  ++   L+ G   +A  L  EM   G  P++
Sbjct: 340 KLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNS 395



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 156/317 (49%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T  TL+S LC   ++   V + D +      P VI  +++I  + +       + L
Sbjct: 8   PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           LK+M  K    + +AY+ I+ +  K R +  A+  + EM+K G   + F Y++ +  +C 
Sbjct: 68  LKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN 127

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++ EA  L ++M    + P   TF +LI+G  K + I E+    E M  + L P    
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++   C      +A  +  +   KG +PN  +Y+ LI G+ K G I E   L  EM 
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMS 247

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
           +KS++P +  Y++L+   CQ G+ +EA +  K M S+ L+P +  Y  ++    + G+  
Sbjct: 248 HKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLD 307

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  L + M    ++P+
Sbjct: 308 EAFELLKAMQESKIEPN 324



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 143/321 (44%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A D    + + G    + ++++++H      R +    +++ M+E    PN+ T 
Sbjct: 94  RLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTF 153

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI  LCK   +     + + +  K   P V    +L+       +++E   L   M R
Sbjct: 154 TILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDR 213

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K    +  +Y++++    K   ++ A  +  EM  +  + + F Y+T +  +C+ G+ +E
Sbjct: 214 KGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQE 273

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++EM + GL P   T++++++G  K   ++E+    + M   K+ P+   +  +I 
Sbjct: 274 AQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIE 333

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +C  G  + A  + +    KG  P  +TY+ +I G  K G   E  +L+ EM      P
Sbjct: 334 GMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLP 393

Query: 302 TLPAYTSLISSLCQCGKLEEA 322
               Y  +I    + G    A
Sbjct: 394 NSCTYNVIIQGFLRNGDTPNA 414



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 121/273 (44%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+   A+ V   + ++G    + ++N L+       + D   +++  M      PN  + 
Sbjct: 164 RMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSY 223

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI+  CK G++     +L  +  K  +P +   ++L+    Q  R +E   LLK M  
Sbjct: 224 NILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCS 283

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ + I YS+++    K  +L+ A  + + M +     N F+YT  I   C +GK+E 
Sbjct: 284 YGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEA 343

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L   +   G++P   T+ ++I G  K     E+     +M     LP+   +N +I+
Sbjct: 344 ARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQ 403

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
                G+   A  ++   + KGFS +  T+  L
Sbjct: 404 GFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 96/219 (43%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M K G       + T +   C   KI +A  L  EM   G +P   T++ +I G  K   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
              +L   ++M  +   P+  A+N +I  LC+     +A    +  + +G  P+  TYS 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           ++ G+   G + E   L+ +M  +++ P    +T LI  LC+   + EA   F+ M    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L P V  Y +LV  +  +    +A  L   M  +G  P+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPN 219


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 177/356 (49%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++IS+NT+I+ + K+    +  R+++ M +N   PN  T  T+I +LCK   +   
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V+ L  +  +   P V+   +++       ++ E   L K M+ +N++ DT+ ++++V  
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +  A  V E M ++G   N++ Y   +  YC + +++EA  ++  M   G  P 
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N+LI G  K+KR+ E+     +M  + L P    ++ +++ LC+ G  ++A  +  
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  P+ + YS L+ G+ K G + E LKL  EM  + I P +  YT LI  +   G
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAG 495

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           KLE A + F  + +  + P +  Y  ++   L++G   +A     +M  +G  P +
Sbjct: 496 KLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDS 551



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 176/368 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  V   + + G     I+FNTLI+ +    +      ++  M+ +   PN  +  T+
Sbjct: 148 DFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTV 207

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G     V +  ++   R  P V+   ++I  + ++  + E +  L  M+ + +
Sbjct: 208 INGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGI 267

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ I++    +  L  A  +++EM+ R    ++  +   +   C+ G + EA C
Sbjct: 268 PPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARC 327

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + + M   G +P   T+N L++G     +++E++     M+ +   P+ S++N +I   C
Sbjct: 328 VSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYC 387

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  +L+   +K  +P+ +TYS L+ G  + G  +E L L+ EM    + P L 
Sbjct: 388 KSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLM 447

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY+ L+   C+ G L+EA K  K M    + P + +Y  L+      G    A  L  ++
Sbjct: 448 AYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKL 507

Query: 365 VSEGLKPS 372
            ++G++P 
Sbjct: 508 SADGIRPD 515



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 175/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +  A  +C  ++  G + ++ S N LI+ + +    D    +   M +    P+  T  T
Sbjct: 112 YSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNT 171

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G+++  V + + +      P VI   ++I  + +       + + ++M +  
Sbjct: 172 LINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y+ I+ +  K R +  A+    EM+ RG   +   Y T +  +C  G++ EA 
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEAT 291

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L +EM    + P   TFN+L++G  K   + E+    E M  +   P+   +N ++   
Sbjct: 292 RLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGY 351

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  +L + + KG +PN  +Y+ LI GY K   + E  +L  EM  K+++P  
Sbjct: 352 CLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDT 411

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y++L+  LCQ G+  EA   FK M S  L+P +  Y  L+    + G+  +AL L +E
Sbjct: 412 VTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471

Query: 364 MVSEGLKPS 372
           M    +KP+
Sbjct: 472 MHERRIKPN 480



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 145/314 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A +    +  RG    ++++NT++H      + +   R+++ M+     P+  T 
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  LCK G +     + + +  K   P      +L+       +++E + +L  M+ 
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K    +  +Y++++    K + +  A  +  EM ++  + ++  Y+T +   C+ G+  E
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L +EM ++GL P    +++L++G  K   ++E+L   ++M  R++ P+   +  +IR
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +   G  + A  + +     G  P+  TY+ +I G  KEG   E  + + +ME     P
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549

Query: 302 TLPAYTSLISSLCQ 315
              +Y  +I    Q
Sbjct: 550 DSCSYNVIIQGFLQ 563



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 144/335 (42%), Gaps = 1/335 (0%)

Query: 39  NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           +D +   Y+ +  N R P+       + ++ K  Q  + V + +++     +  V     
Sbjct: 78  DDALTSFYRMVRMNPR-PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI  + +   ++  + ++ +M +  +  D I ++ ++        ++ A+ ++ EM+  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              N   Y T I   C+ G    A  + ++ME    KP   T+N +I+   K + + E++
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            +  +M+ R + P    +N ++   C  G   +A  +    + +   P+ +T++ L+ G 
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG + E   +   M  K   P    Y +L+   C   +++EA K   IM      P +
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             Y  L+  + +     +A  L  EM  + L P T
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDT 411



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 122/264 (46%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I++ +    RM+R N     + +   + +  K +   SA+ +  +M   G + N +    
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C    ++ A  +M +M   G++P   TFN LI G     +I+E++    +M+   
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+  ++N +I  LC+ GN   A  +          PN +TY+ +I    K+  + E +
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +   EM  + I P +  Y +++   C  G+L EA + FK M   +++P    +  LV   
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G  ++A  + E M  +G +P+
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPN 340



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 133/284 (46%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+     +  I ++++    + L  +M    + H+  + ++++    ++ +++ A+ V
Sbjct: 94  PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             +M K G   ++  + T I   C  GKI+EA  L  EM  +G +P   ++N +I G  K
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
                 ++    +M   +  P+   +N +I  LC+     +A   L+  +D+G  P+ +T
Sbjct: 214 NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ ++ G+   G++ E  +L+ EM  +++ P    +  L+  LC+ G + EA    + M 
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
                P    Y +L+  +       +A+ +   M+ +G  P+ S
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLS 377



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 105/231 (45%)

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           +++ AL  +  M++     +   +  F+G+  +  +   A  L  +M+  G+     + N
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +LI    +   ++ ++S   +M    + P    FN +I  LC  G  K+A G+    +  
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  PN I+Y+ +I G  K G     ++++ +ME     P +  Y ++I SLC+   + EA
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++   M    + P V  Y +++      G   +A  L +EMV   + P T
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDT 306



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 125/266 (46%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V   + ++G   +  ++N L+      ++ D   ++   M+     PN ++   LI+  C
Sbjct: 328 VSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYC 387

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K  ++     +L  +  K  +P  +  ++L+  + Q  R  E + L K M    ++ D +
Sbjct: 388 KSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLM 447

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AYS+++    K  +L+ AL + +EM +R    N  +YT  I      GK+E A  L  ++
Sbjct: 448 AYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKL 507

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G++P   T+N++I+G  K    +E+  +  +M     LP   ++N +I+   +  ++
Sbjct: 508 SADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDS 567

Query: 250 KQANGMLTLALDKGFSPNEITYSHLI 275
             A  ++   + K FS +  T+  L+
Sbjct: 568 STAIQLIDEMVGKRFSADSSTFQMLL 593



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/160 (18%), Positives = 74/160 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + +   G    L++++ L+    K    D   ++ + M E    PN      LI 
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +   G+L+   ++  ++      P +     +I  +++E   +E     ++M     + 
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           D+ +Y++I+   ++ ++  +A+ + +EM+ + FSA+S  +
Sbjct: 550 DSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 176/372 (47%), Gaps = 3/372 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  FE A  + + +  RGF+ S I+FNT+I  + K  +      I+  M +    P+  T
Sbjct: 451 MENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGIT 510

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            RTLI   CK   +     +   +  +  SP + +  SLI  + +  R+ E   LL  M 
Sbjct: 511 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 570

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y  ++    K   L+ A   Y EM + G SAN  + +T +      G+I+
Sbjct: 571 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 630

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EAN LMQ+M + G  P  E F       A  ++I +SL   ++     LLP+   +N  I
Sbjct: 631 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSL---DESCKTFLLPNNIVYNIAI 687

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G    A    ++   KGF P+  TY  LI GY+  G + E  +L  EM  + + 
Sbjct: 688 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 747

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI+ LC+   ++ A + F  +    L P V  Y +L+  + + GN   A  L
Sbjct: 748 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807

Query: 361 CEEMVSEGLKPS 372
            ++M+ EG+ PS
Sbjct: 808 KDKMIEEGISPS 819



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 175/387 (45%), Gaps = 36/387 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SL S N+L++ + K+        +YQ M+     P+   +  +++A CK G++      +
Sbjct: 156 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 215

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK- 140
            ++      P ++   SLI   +    +E    +LK M  K +  + + Y+L++    K 
Sbjct: 216 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 275

Query: 141 ---------MRNL--ESALV------------------------VYEEMLKRGFSANSFV 165
                    +R +  E+ALV                        + +EML+ G   N F+
Sbjct: 276 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 335

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
             + I  YC+ G+I EA  ++  M +  LKP   ++N L++G  +     E+ + C++M+
Sbjct: 336 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 395

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              + P+   +N +++ LC  G    A  +  L + +G +P+E+ YS L+ G  K    +
Sbjct: 396 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 455

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
               L+ ++  +  + +   + ++IS LC+ GK+ EA++ F  MK     P    Y +L+
Sbjct: 456 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + +  N  +A  +   M  E + PS
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPS 542



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 170/376 (45%), Gaps = 2/376 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRT 63
           E A  V +++ ++G S +++++  LI    K  + D   ++ + M E     P+E     
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C+ G++   V +LD +        + +  SLI    +   I E   ++ RM+  N
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D+ +Y+ ++    +  +   A  + ++ML+ G       Y T +   C  G  ++A 
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M   G+ P +  ++ L++G  K +  E + +  + +++R    S   FN MI  L
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +     D G SP+ ITY  LI GY K   + +  K+   ME + ISP++
Sbjct: 484 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI 543

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SLIS L +  +L E       M    L P +  Y +L+    ++G   KA     E
Sbjct: 544 EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFE 603

Query: 364 MVSEGLKPSTSYLCSA 379
           M   GL  +   +CS 
Sbjct: 604 MTENGLSANI-IICST 618



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 156/331 (47%), Gaps = 3/331 (0%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  R L++    G   +L   N+LI+   K         +   M++    P+  +  TL+
Sbjct: 316 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 375

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C+ G      ++ D++  +   P V+   +L+  + +    ++ + +   M+++ + 
Sbjct: 376 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVA 435

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + YS ++    KM N E A  +++++L RGF+ +   + T I   C+ GK+ EA  +
Sbjct: 436 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 495

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             +M++ G  P   T+  LI+G  KA  + ++      M    + PS   +N +I  L +
Sbjct: 496 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK 555

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +   +LT    +G +PN +TY  LI G+ KEG + +    Y+EM    +S  +  
Sbjct: 556 SRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 615

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            ++++S L + G+++EA+   + M  H   P
Sbjct: 616 CSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 646



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 174/357 (48%), Gaps = 1/357 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           R F+ S   F+ ++ V  +         ++ +M +  R P+  +  +L++ L K G+  T
Sbjct: 116 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 175

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +  ++      P V + + ++    ++ +++E    +K+M    +  + + Y  ++ 
Sbjct: 176 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 235

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLK 195
             V + ++E+A  V + M ++G S N   YT  I  YC+  K++EA  +++ M E A L 
Sbjct: 236 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 295

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P +  + +LI+G  +  +I++++   ++M+   L  +    N +I   C+ G   +A G+
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 355

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +T  +D    P+  +Y+ L+ GY +EG   E   L  +M  + I PT+  Y +L+  LC+
Sbjct: 356 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 415

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G  ++A + + +M    + P    Y +L+    +  N   A  L +++++ G   S
Sbjct: 416 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKS 472



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 7/299 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   +E+   S S+  +N+LI  + KS R   V  +   M      PN  T   LI 
Sbjct: 527 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 586

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI- 125
             CK G L         +     S  +I+ ++++  + +  RI+E  +L+++M+      
Sbjct: 587 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 646

Query: 126 -HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
            H+    S I YA ++   +  +L   +E  K     N+ VY   I   C+ GK+++A  
Sbjct: 647 DHECFLKSDIRYAAIQ--KIADSL---DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 701

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               +   G  P + T+  LI G + A  ++E+    ++M+ R L+P+   +N +I  LC
Sbjct: 702 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 761

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           +  N  +A  +      KG  PN +TY+ LI GY K G +    KL  +M  + ISP++
Sbjct: 762 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 121 RKNMIHDTIAY--SLIVYAKVKMRNLESALVVYEEMLK--RGFSANSFVYTTFIGAYCEY 176
           R  M  +T AY   L+   K K R      V+++E++   R F+ +  V+   +  Y E 
Sbjct: 80  RGRMYDETRAYLNQLVDLCKFKDR----GNVIWDELVGVYREFAFSPTVFDMILKVYVEK 135

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G  + A  +   M   G  P   + N L+    K      +    +QM+   ++P     
Sbjct: 136 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 195

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           + M+   C+ G   +A G +    + G  PN +TY  LI GY   G+++    +   M  
Sbjct: 196 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSE 255

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKA 355
           K +S  +  YT LI   C+  K++EA+K  + M+   +LVP    Y  L+  +   G   
Sbjct: 256 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKID 315

Query: 356 KALHLCEEMVSEGLKPSTSYLCSA 379
            A+ L +EM+  GLK +  ++C++
Sbjct: 316 DAVRLLDEMLRLGLK-TNLFICNS 338



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 46/90 (51%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + +RG   +++++N LI+ + KS+  D   R++  + +   +PN  T  TLI 
Sbjct: 734 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 793

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVN 96
             CK G +     + D++  +  SP +  N
Sbjct: 794 GYCKIGNMDAAFKLKDKMIEEGISPSIQCN 823


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 176/373 (47%), Gaps = 3/373 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  FE A  + + +  RGF+ S I+FNT+I  + K  +      I+  M +    P+  T
Sbjct: 485 MENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGIT 544

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            RTLI   CK   +     +   +  +  SP + +  SLI  + +  R+ E   LL  M 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 604

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y  ++    K   L+ A   Y EM + G SAN  + +T +      G+I+
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EAN LMQ+M + G  P  E F       A  ++I +SL   ++     LLP+   +N  I
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSL---DESCKTFLLPNNIVYNIAI 721

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G    A    ++   KGF P+  TY  LI GY+  G + E  +L  EM  + + 
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI+ LC+   ++ A + F  +    L P V  Y +L+  + + GN   A  L
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 841

Query: 361 CEEMVSEGLKPST 373
            ++M+ EG+ PS 
Sbjct: 842 KDKMIEEGISPSV 854



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 175/387 (45%), Gaps = 36/387 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SL S N+L++ + K+        +YQ M+     P+   +  +++A CK G++      +
Sbjct: 190 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 249

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK- 140
            ++      P ++   SLI   +    +E    +LK M  K +  + + Y+L++    K 
Sbjct: 250 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309

Query: 141 ---------MRNL--ESALV------------------------VYEEMLKRGFSANSFV 165
                    +R +  E+ALV                        + +EML+ G   N F+
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
             + I  YC+ G+I EA  ++  M +  LKP   ++N L++G  +     E+ + C++M+
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              + P+   +N +++ LC  G    A  +  L + +G +P+E+ YS L+ G  K    +
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 489

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
               L+ ++  +  + +   + ++IS LC+ GK+ EA++ F  MK     P    Y +L+
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + +  N  +A  +   M  E + PS
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPS 576



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 166/366 (45%), Gaps = 1/366 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRT 63
           E A  V +++ ++G S +++++  LI    K  + D   ++ + M E     P+E     
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C+ G++   V +LD +        + +  SLI    +   I E   ++ RM+  N
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D+ +Y+ ++    +  +   A  + ++ML+ G       Y T +   C  G  ++A 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M   G+ P +  ++ L++G  K +  E + +  + +++R    S   FN MI  L
Sbjct: 458 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +     D G SP+ ITY  LI GY K   + +  K+   ME + ISP++
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI 577

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SLIS L +  +L E       M    L P +  Y +L+    ++G   KA     E
Sbjct: 578 EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFE 637

Query: 364 MVSEGL 369
           M   GL
Sbjct: 638 MTENGL 643



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 156/331 (47%), Gaps = 3/331 (0%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  R L++    G   +L   N+LI+   K         +   M++    P+  +  TL+
Sbjct: 350 DAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 409

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C+ G      ++ D++  +   P V+   +L+  + +    ++ + +   M+++ + 
Sbjct: 410 DGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVA 469

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + YS ++    KM N E A  +++++L RGF+ +   + T I   C+ GK+ EA  +
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEI 529

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             +M++ G  P   T+  LI+G  KA  + ++      M    + PS   +N +I  L +
Sbjct: 530 FDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFK 589

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +   +LT    +G +PN +TY  LI G+ KEG + +    Y+EM    +S  +  
Sbjct: 590 SRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIII 649

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            ++++S L + G+++EA+   + M  H   P
Sbjct: 650 CSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 174/357 (48%), Gaps = 1/357 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           R F+ S   F+ ++ V  +         ++ +M +  R P+  +  +L++ L K G+  T
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +  ++      P V + + ++    ++ +++E    +K+M    +  + + Y  ++ 
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLK 195
             V + ++E+A  V + M ++G S N   YT  I  YC+  K++EA  +++ M E A L 
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P +  + +LI+G  +  +I++++   ++M+   L  +    N +I   C+ G   +A G+
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +T  +D    P+  +Y+ L+ GY +EG   E   L  +M  + I PT+  Y +L+  LC+
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G  ++A + + +M    + P    Y +L+    +  N   A  L +++++ G   S
Sbjct: 450 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKS 506



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 167/360 (46%), Gaps = 7/360 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   +E+   S S+  +N+LI  + KS R   V  +   M      PN  T   LI 
Sbjct: 561 AFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 620

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI- 125
             CK G L         +     S  +I+ ++++  + +  RI+E  +L+++M+      
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680

Query: 126 -HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
            H+    S I YA ++   +  +L   +E  K     N+ VY   I   C+ GK+++A  
Sbjct: 681 DHECFLKSDIRYAAIQ--KIADSL---DESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 735

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               +   G  P + T+  LI G + A  ++E+    ++M+ R L+P+   +N +I  LC
Sbjct: 736 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  N  +A  +      KG  PN +TY+ LI GY K G +    KL  +M  + ISP++ 
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y++LI+ LC+ G +E + K    M    +   +  Y +LV  ++  G   K   L + M
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 135/300 (45%), Gaps = 3/300 (1%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + AF     + + G S ++I  +T++  + +  R D    + Q M+++  +P+     
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH---E 683

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             + +  +   +Q   D LD        P  IV    I  + +  ++++       +  K
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + D   Y  +++      N++ A  + +EML+RG   N   Y   I   C+   ++ A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  ++   GL P   T+N LI+G  K   ++ +    ++M+   + PS   ++ +I  
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ +++  +L   +  G     I Y  L+ GY + GE+Q++ KLY  M  + +S T
Sbjct: 864 LCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTT 923



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 121 RKNMIHDTIAY--SLIVYAKVKMRNLESALVVYEEMLK--RGFSANSFVYTTFIGAYCEY 176
           R  M  +T AY   L+   K K R      V+++E++   R F+ +  V+   +  Y E 
Sbjct: 114 RGRMYDETRAYLNQLVDLCKFKDR----GNVIWDELVGVYREFAFSPTVFDMILKVYVEK 169

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G  + A  +   M   G  P   + N L+    K      +    +QM+   ++P     
Sbjct: 170 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 229

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           + M+   C+ G   +A G +    + G  PN +TY  LI GY   G+++    +   M  
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSE 289

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKA 355
           K +S  +  YT LI   C+  K++EA+K  + M+   +LVP    Y  L+  +   G   
Sbjct: 290 KGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKID 349

Query: 356 KALHLCEEMVSEGLKPSTSYLCSA 379
            A+ L +EM+  GLK +  ++C++
Sbjct: 350 DAVRLLDEMLRLGLK-TNLFICNS 372



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 77/157 (49%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + +RG   +++++N LI+ + KS+  D   R++  + +   +PN  T  TLI 
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G +     + D++  +  SP V+  ++LI  + +   IE  M LL +M++  +  
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
             I Y  +V   ++   ++    +Y+ M  R  S  +
Sbjct: 888 KLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTA 924


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 178/359 (49%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R    AF     + + G+    + FNTL++ +    R      +   M+E    P   T+
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL++ LC  G++   V ++DR+      P  +    ++  + +  +    M LL++M  
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +N+  D + YS+I+    K  +L++A  ++ EM  +GF A+   Y T IG +C  G+ ++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              L+++M    + P   TF++LI+   K  ++ E+    ++MM R + P+   +N +I 
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+    ++A  M+ L + KG  P+ +T++ LI GY K   I + L+L+ EM  + +  
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
               Y +L+   CQ GKLE A K F+ M S  + P +  Y+ L+    + G   KAL +
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 175/394 (44%), Gaps = 35/394 (8%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + GF  + +++  +++V+ KS +  L   + + M E     +      +I  LCK G L 
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              ++ + +  K     +I   +LI       R ++G  LL+ M+++ +  + + +S+++
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            + VK   L  A  + +EM++RG + N+  Y + I  +C+  ++EEA  ++  M + G  
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN+LI G  KA RI++ L    +M  R ++ +   +N +++  C+ G  + A  +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
               + +   P+ ++Y  L+ G    GE+++ L+++ ++E                    
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520

Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
                           K +     AY  +IS LC+   L +AD  F+ M      P    
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           Y  L+  HL   +   A  L EEM S G     S
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVS 614



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 175/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E+   +C+ +E +G + S+ + + +I+   +  +    +     +++    P+     T
Sbjct: 104 YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNT 163

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++ LC   ++   ++++DR+      P +I   +L+  +    ++ + +VL+ RM+   
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y  ++    K      A+ +  +M +R    ++  Y+  I   C+ G ++ A 
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EME  G K    T+N LI G   A R ++       M+ RK+ P+   F+ +I   
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A+ +L   + +G +PN ITY+ LI G+ KE  ++E +++   M  K   P +
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  LI+  C+  ++++  + F+ M    ++     Y +LV    + G    A  L +E
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463

Query: 364 MVSEGLKPS 372
           MVS  ++P 
Sbjct: 464 MVSRRVRPD 472



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 163/367 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ R + Q     ++I FN L   + K+ + +LV  + + M       +  T+  +I+
Sbjct: 72  AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+  +L      + +I      P  ++  +L+  +  E R+ E + L+ RM+      
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             I  + +V        +  A+V+ + M++ GF  N   Y   +   C+ G+   A  L+
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++ME   +K     ++++I+G  K   ++ + +   +M  +        +N +I   C  
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G       +L   + +  SPN +T+S LI  + KEG+++E  +L  EM  + I+P    Y
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI   C+  +LEEA +   +M S    P +  +  L+  + +       L L  EM  
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431

Query: 367 EGLKPST 373
            G+  +T
Sbjct: 432 RGVIANT 438



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 162/362 (44%), Gaps = 39/362 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +E +GF   +I++NTLI     + R D   ++ + M++    PN  T   LI 
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +  K G+L+    +L  +  +  +P  I   SLI    +E R+EE + ++  M+ K    
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + +++++    K   ++  L ++ EM  RG  AN+  Y T +  +C+ GK+E A  L 
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL----------------- 229
           QEM +  ++P   ++ +L++G      +E++L    ++   K+                 
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521

Query: 230 ------------LP------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                       LP         A+N MI  LC   +  +A+ +     ++G +P+E+TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI  +  + +     +L  EM+    S   PA  S +  +       E DK F  M S
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMK----SSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637

Query: 332 HS 333
            +
Sbjct: 638 TT 639



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 139/312 (44%)

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           R  +S+   G +    VD+   +   R  P VI    L   I + ++ E  + L K+M  
Sbjct: 57  RDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K + H     S+++    + R L  A     +++K G+  ++ ++ T +   C   ++ E
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+  M   G KP   T N L+ G     ++ +++   ++M+     P+   +  ++ 
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +C+ G    A  +L    ++    + + YS +I G  K+G +     L+ EME K    
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI   C  G+ ++  K  + M    + P V  +  L+   +++G   +A  L 
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356

Query: 362 EEMVSEGLKPST 373
           +EM+  G+ P+T
Sbjct: 357 KEMMQRGIAPNT 368



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/204 (19%), Positives = 89/204 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +  +G    +++FN LI+   K++R D    +++ M       N  T  T
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   C+ G+L+    +   +  +R  P ++    L+  +     +E+ + +  ++ +  
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           M  D   Y +I++       ++ A  ++  +  +G   ++  Y   I   C    + +A+
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563

Query: 184 CLMQEMENAGLKPYDETFNLLIEG 207
            L ++M   G  P + T+N+LI  
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRA 587


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 175/361 (48%), Gaps = 7/361 (1%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-------PNEATIRTLISALCKGG 72
           S S++++NTL+  + ++ + +    ++Q ML+   +       PN  T   LI  LCK  
Sbjct: 146 SPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKAN 205

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++   V++L+ +  + CSP VI  T L+  + +E ++     +L+ ML    + + + Y+
Sbjct: 206 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 265

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            +++   + R +  AL +  +M  RG + N   Y T I   C+ G++++A  ++ +M + 
Sbjct: 266 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 325

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P    +N+LI G  KA +++ES++   + +S  + P    ++ +I  LC      +A
Sbjct: 326 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 385

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L     +G  P+ I YS LI G  K G++ E   LY  M        +  Y++LI  
Sbjct: 386 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDG 445

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+ G+++EA      M      P    Y SL+    +  +  +A+ L EEM      PS
Sbjct: 446 LCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPS 505

Query: 373 T 373
            
Sbjct: 506 A 506



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 9/365 (2%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R ++  G     + +  L+  + K  R D    I   M ++   PN  T  +LI  LCK 
Sbjct: 68  RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD---- 127
            +     ++ + +    CSP ++   +L+  + +  ++E  M L + ML +   HD    
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS-HDMDDR 186

Query: 128 ----TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                I YS+++    K   +  A+ + E M  RG S +   YT  +   C+  K+  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++EM +AG  P   T+N L+ G  +A+R+ ++L+    M  R   P+   +  +I  L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  K A  ML   +DKG +P+ + Y+ LI G  K  ++ E + L        I P +
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+S+I  LC+  +L+EA +    +KS    P V +Y +L+    + G   +A  L E 
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426

Query: 364 MVSEG 368
           M  +G
Sbjct: 427 MAGDG 431



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 178/377 (47%), Gaps = 7/377 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  +   +   G   +++++N+LI  + K++  D    +++HM      P+  T  T
Sbjct: 95  LDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNT 154

Query: 64  LISALCKGGQLQT----YVDMLDRIH---GKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           L+  L + G+L+     + +MLDR       RCSP VI  + LI  + +  R+ + + LL
Sbjct: 155 LLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELL 214

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           + M  +    D I Y+++V    K   + +A  V  EML  G   N   Y + +   C  
Sbjct: 215 ESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 274

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
            ++ +A  LM++M   G  P   T+  LI+G  K  R++++ +    M+ +   P    +
Sbjct: 275 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 334

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I  LC+     ++  +L  A+  G  P+ +TYS +I G  +   + E  +L   ++ 
Sbjct: 335 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 394

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           +   P +  Y++LI  LC+ GK++EA   +++M        V  Y +L+    + G   +
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDE 454

Query: 357 ALHLCEEMVSEGLKPST 373
           A  L   MV  G  PST
Sbjct: 455 AHLLLARMVRMGTPPST 471



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 177/358 (49%), Gaps = 9/358 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++V R +   G   +L+++N+L+H + ++ R      + + M      PN  T  TLI 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+++    ML  +  K  +P +++   LI  + + ++++E + LL+R +   +  
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS ++Y   +   L+ A  +   +  RG   +  +Y+T I   C+ GK++EA  L 
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G      T++ LI+G  KA R++E+     +M+     PS   +N +I+ LC+ 
Sbjct: 425 EVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDL 484

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP----- 301
            +  +A  ++        +P+ +TY+ LI G  +   +   + L  + + + ++      
Sbjct: 485 NHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTAL 544

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
              AY+SLI  LC+ G++ EA  YF+ M  + ++P    Y     I LE   K+K LH
Sbjct: 545 DTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYS----ILLEGLKKSKDLH 598



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 176/371 (47%), Gaps = 5/371 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   ++ RG S  +I++  L+  + K  +    W + + ML+    PN  T  +L+ 
Sbjct: 210 AVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLH 269

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+  ++   + ++  +  + C+P V+   +LI  + +  R+++   +L  M+ K    
Sbjct: 270 GLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP 329

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y++++    K   ++ ++ +    +  G   +   Y++ I   C   +++EA  L+
Sbjct: 330 DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 389

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             +++ G  P    ++ LI+G  KA +++E+    E M           ++ +I  LC+ 
Sbjct: 390 LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKA 449

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A+ +L   +  G  P+ +TY+ LI G      + E ++L  EME  + +P+   Y
Sbjct: 450 GRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTY 509

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPG---VDI--YESLVGIHLEKGNKAKALHLC 361
             LI  +C+  +++ A    +  K+  +  G   +D   Y SL+    + G  A+AL   
Sbjct: 510 NILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYF 569

Query: 362 EEMVSEGLKPS 372
           +EM+  G+ P 
Sbjct: 570 QEMIDNGVIPD 580



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 146/324 (45%), Gaps = 7/324 (2%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   L+   C+GG++       D +  K   P V + + LI  + + +R  + +  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            + M    ++ DT+ Y+ ++    K + L+ AL +  EM   G   N   Y + I   C+
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-------K 228
             + + A  L + M++    P   T+N L++G  +  ++E +++  ++M+ R       +
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   ++ +I  LC+     QA  +L     +G SP+ ITY+ L+ G  KE ++    
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           ++  EM      P L  Y SL+  LC+  ++ +A    + M      P V  Y +L+   
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            + G    A  +  +M+ +G  P 
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPD 330



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 140/293 (47%), Gaps = 8/293 (2%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D C  L     +G +  L+ +N LI+ + K+D+ D    + +  +     P+  T  ++I
Sbjct: 314 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 373

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LC+  +L     +L  +  + C P VI+ ++LI  + +  +++E   L + M      
Sbjct: 374 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCD 433

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + YS ++    K   ++ A ++   M++ G   ++  Y + I   C+   ++EA  L
Sbjct: 434 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 493

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA-----FNEMI 240
           ++EME +   P   T+N+LI G  + +R++ ++   EQ  +R +    +A     ++ +I
Sbjct: 494 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLI 553

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             LC+ G   +A       +D G  P+ ITYS L+ G  K  ++ E+  L  +
Sbjct: 554 DGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 606



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 7/292 (2%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           C P V    +L+    +   I++       M  KN++ +    S+++    K +    AL
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
             +  M   G  A++ +YT  +    +  ++++A  ++ EM + G +P   T+N LI+G 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK------ 262
            K    + +    E M S +  PS   +N ++  L   G  ++A  +    LD+      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 263 -GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
              SPN ITYS LI G  K   + + ++L   M+ +  SP +  YT L+  LC+  K+  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A +  + M     VP +  Y SL+         + AL L  +M   G  P+ 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNV 296


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 176/359 (49%), Gaps = 6/359 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG+  S  +FNT+I+   K ++       +  M E    P+  T RTLI   CK G ++ 
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEE 552

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + +++  +   P + +  SLI  + + ++  E M LL  M  K +  + + Y  ++ 
Sbjct: 553 AFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIA 612

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL-- 194
                  L+ A   Y +M+++GF+ N  + +  + +    G+I+EAN L+Q+M N  +  
Sbjct: 613 GWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFL 672

Query: 195 -KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
              Y +  +   +G   +++I ++L    +  S   LP+   +N  I  LC+ G    A 
Sbjct: 673 DHGYFDRLHKADDGNLDSQKIADTLDESSKSFS---LPNSVVYNIAIAGLCKSGKVDDAK 729

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            + +  L +GFSP+  TY  LI GY+  G + +   L  EM  + ++P +  Y +LI+ L
Sbjct: 730 KIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGL 789

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G L+ A K F  +    L P V  Y  L+  + + GN  +AL L  +M+ EG+ PS
Sbjct: 790 CKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPS 848



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 172/362 (47%), Gaps = 12/362 (3%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF V   +E+     S+  +N+LI  + KS +   V  +   M      PN  T  TL
Sbjct: 551 EEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTL 610

Query: 65  ISALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           I+  C  G+L      Y DM++    K  +P VI+ + ++  + +  RI+E  +LL++M+
Sbjct: 611 IAGWCDEGRLDKAFTAYFDMIE----KGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 666

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALV--VYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
             ++  D   +  +   K    NL+S  +    +E  K     NS VY   I   C+ GK
Sbjct: 667 NLDVFLDHGYFDRL--HKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGK 724

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +++A  +   +   G  P + T+  LI G + A  + ++ S  ++M+ R L P+   +N 
Sbjct: 725 VDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNA 784

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  LC+ GN  +A  +      KG +PN I+Y+ LI GY K G  +E L L  +M  + 
Sbjct: 785 LINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEG 844

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           ISP+L  Y++LI   C+ G + +A      M+       +  +  LV  H++ G   K  
Sbjct: 845 ISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIA 904

Query: 359 HL 360
            L
Sbjct: 905 KL 906



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 151/312 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++L   N LI+   K+ +     R+   M++    P   +  TL+   C+ G +   
Sbjct: 354 GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKA 413

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + + +        V+ + SL+  + +    E+ + +   ML++ +  D ++Y  ++  
Sbjct: 414 ISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL 473

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             KM     AL ++ ++L RG+  +++ + T I  +C+  K+ EA      M+  G +P 
Sbjct: 474 LFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPD 533

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  K   +EE+    E+M    +LPS   +N +I  L +    ++   +L+
Sbjct: 534 GVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLS 593

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG SPN +TY  LI G+  EG + +    Y++M  K  +P +   + ++SSL + G
Sbjct: 594 EMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLG 653

Query: 318 KLEEADKYFKIM 329
           +++EA+   + M
Sbjct: 654 RIDEANMLLQKM 665



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 173/370 (46%), Gaps = 40/370 (10%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIH---VVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           VA D  + ++  GF L+++++N+LI     +   +R ++V ++   M E     N+ T+ 
Sbjct: 236 VAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKL---MGERGILRNKVTLT 292

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C+  +L+                          ++++E    EGMVL       
Sbjct: 293 LLIKGYCRQCKLEEAE-----------------------KVLREMERSEGMVL------- 322

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D  AY +++    ++  ++ A+ + +EML  G   N F+    I  YC+ G++ EA
Sbjct: 323 ----DEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEA 378

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+  M +  L+P   +++ L++G  +   + +++S   +M+   +  +    N +++ 
Sbjct: 379 ERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKG 438

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G  + A  +  L L +G +P+E++Y  L+    K GE    L L+ ++  +    +
Sbjct: 439 LCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRS 498

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             A+ ++I+  C+  K+ EA++ F  MK     P    Y +L+  + + GN  +A  + E
Sbjct: 499 TYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKE 558

Query: 363 EMVSEGLKPS 372
           +M  E + PS
Sbjct: 559 KMEKEAILPS 568



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 172/370 (46%), Gaps = 18/370 (4%)

Query: 22  SLISFNTLIHVVTKSDRN----DLVWRIY---------QHMLENIR----YPNEATIRTL 64
           SL+ +N L+ V      +    D++ +IY          H+ +N+      P+  +   L
Sbjct: 130 SLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRL 189

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +S+L + G+    + + D I+     P V   + ++    ++  +   +  +K M     
Sbjct: 190 LSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGF 249

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ ++   V + ++E A +V + M +RG   N    T  I  YC   K+EEA  
Sbjct: 250 ELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEK 309

Query: 185 LMQEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           +++EME +     DE  + +LI+G  +  ++++++   ++M++  L  +    N +I   
Sbjct: 310 VLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGY 369

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +L   +D    P   +YS L+ G+ +EG + + + +Y EM    I   +
Sbjct: 370 CKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNV 429

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             + SL+  LC+ G  E+A   + +M    + P    Y +L+ +  + G   +AL L  +
Sbjct: 430 VTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWND 489

Query: 364 MVSEGLKPST 373
           +++ G   ST
Sbjct: 490 ILARGYGRST 499



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 5/354 (1%)

Query: 29  LIHVVTKSDRND---LVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           L  +VT S  N    +VW     + E+ ++ +      ++   C+ G ++  + + D + 
Sbjct: 117 LNELVTPSKNNYSSLVVWNELVRVFEDFKF-SPTVFDMILKIYCEKGMIKNALHVFDNMG 175

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
              C P +     L+  ++++      +++   + R  ++ D    S++V A  K   + 
Sbjct: 176 KLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVN 235

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A+   +EM   GF  N   Y + I      G +E A  +++ M   G+     T  LLI
Sbjct: 236 VAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLI 295

Query: 206 EGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +G  +  ++EE+     +M  S  ++    A+  +I   C       A  +    L+ G 
Sbjct: 296 KGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGL 355

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             N    + LI GY K G++ E  +L   M    + P   +Y++L+   C+ G + +A  
Sbjct: 356 RMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAIS 415

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            +  M    +   V  + SL+      G    ALH+   M+  G+ P     C+
Sbjct: 416 VYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCT 469


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 175/371 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A    + ++QRG +  ++SF+ LI + +   + D      + M      P+      +
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G +   + + D + G  C P V+   +L+  + ++ R+ +   LL  M  + +
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   ++ +++   +  N E AL +++ +L +    +   Y + I   C  G + +AN 
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M    + P   T+++LI+   +  ++EE+  + ++M+S+  LP+   +N +I+  C
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             GN K+    L   +     P+ IT++ LI GY KE  +     ++  ME + + P   
Sbjct: 519 RSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAV 578

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  +I+   + G +EEA + FK M +  + P    Y SL+  H+  GN  +A  L +EM
Sbjct: 579 TYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEM 638

Query: 365 VSEGLKPSTSY 375
           +  G  P   +
Sbjct: 639 MHRGFAPDDKF 649



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 176/348 (50%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           + N ++H   KS   D    +   M +   +P+  T   LI A  + G +   + ++D +
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K   P ++   S++  + +  R ++   + + M + ++  D  ++++++    ++  +
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A+  Y+EM +RG + +   ++  IG +   GK++ A   ++EM+  GL P    + ++
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  +A  + E+L   ++M+    LP    +N ++  LC+      A  +L    ++G 
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+  T++ LI GY ++G  ++ L+L+  + ++ + P + AY SLI  +C+ G L +A++
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  M +  + P    Y  L+  H EKG   +A    +EMVS+G  P+
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPN 506



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 176/369 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  +   +  +G    +++FN+++  + K  R D    +++ M +    P+  +   L
Sbjct: 209 DAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNIL 268

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G+++  +     +  +  +P V+  + LI       +++     L+ M    +
Sbjct: 269 IGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGL 328

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + Y++++    +  ++  AL V +EM+  G   +   Y T +   C+  ++ +A  
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEE 388

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM+  G+ P   TF  LI G  +    E++L   + ++ ++L P   A+N +I  +C
Sbjct: 389 LLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMC 448

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+  +AN +      +   PN +TYS LI  + ++G+++E      EM  K   P + 
Sbjct: 449 RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIM 508

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y S+I   C+ G +++  ++ + M   +++P +  + +L+  ++++ N   A ++   M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIM 568

Query: 365 VSEGLKPST 373
             E ++P  
Sbjct: 569 EKEMVQPDA 577



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/218 (19%), Positives = 87/218 (39%), Gaps = 36/218 (16%)

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMS----------------------------- 226
           P  + F+LLI    ++++  E+      ++                              
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 227 -RKLLPSCSAFNE-----MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            R +L S S  N      M+   C+     +A+ +++    +   P+ +T++ LI    +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G++   + L   M  K + P +  + S++  LC+  + ++A + F+ M   S+ P V  
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYLC 377
           +  L+G     G   +A+   +EM   G+ P   S+ C
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSC 302


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 179/370 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A D+ + + + G    ++++NT++  + KS R +    ++  M      PN  +  
Sbjct: 95  MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 154

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+I  LC+  ++     +   +  K   P       LI  + +  ++ E   L +RML  
Sbjct: 155 TIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS 214

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +    + Y+++++       L+ AL +++ M  +G   + F +   I A+C+ GK++EA
Sbjct: 215 GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEA 274

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++ M + G  P   T++ LI G     R++++    E M+ R+  P+    N +I  
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G  K+A  +L   +  G SP+ +TY+ L+ G+ + G+ +   +L  +M  + ++P 
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT+L+S LC+  +L EA   F  MKS    P +  Y +L+      G     L L  
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 363 EMVSEGLKPS 372
           EMV  G+ P 
Sbjct: 455 EMVCAGISPD 464



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 174/374 (46%), Gaps = 7/374 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L   G + S +++ +LIH +  ++  D    ++  M      P+  T   +I A CK G 
Sbjct: 36  LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 95

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+   D++ ++      P V+   +++  + +  R+EE ++L   M R     +  +++ 
Sbjct: 96  LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 155

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    +   ++ A  V+ EM  +    +S+ Y   I    + GK+ EA  L Q M ++G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N++I G   A  ++E+L   + M S+   PS   FN +I   C+ G   +A 
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L    D G  P+ +TYS LI G      + +   L  +M  +   PT+    +LI  L
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
           C+ G+++EA +    M S    P V  Y +LV  H   G   +A  L  +MV+ GL P+ 
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395

Query: 373 ------TSYLCSAS 380
                  S LC A+
Sbjct: 396 VTYTALVSGLCKAN 409



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 167/371 (45%), Gaps = 2/371 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  V   +E +       S+  LI  + K+ + +  ++++Q ML++   P+  T   
Sbjct: 166 IDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNV 225

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  +C    L   +++   +  K C P       LI    +  +++E   LLKRM    
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + D + YS ++     +  ++ A  + E+M+KR          T I   C+ G+I+EA 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M ++G  P   T+N L+ G  +A + E +      M++R L P+   +  ++  L
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A G+       G +PN  TY+ LI G+   G++   LKL+ EM    ISP  
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKS--HSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
             Y +L + LC+ G+   A +  +  +    S   G ++Y   V   LE G    AL   
Sbjct: 466 VVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFV 525

Query: 362 EEMVSEGLKPS 372
            +MV  G  P+
Sbjct: 526 RDMVRGGQLPA 536



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 158/350 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G + +  S NT+I  + +  + D   +++  M      P+  +   LI  L K G+
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGK 200

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     +  R+     +P  +    +I  +     ++E + L K M  K        +++
Sbjct: 201 LNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K   L+ A  + + M   G   +   Y+T I   C   ++++A  L+++M    
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            KP   T N LI G  KA RI+E+    + M+S    P    +N ++   C  G  ++A 
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 380

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L+  + +G +PN +TY+ L+ G  K   + E   ++ +M+    +P L  YT+LI   
Sbjct: 381 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 440

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
           C  G+++   K F  M    + P   +Y +L     + G  A+AL +  E
Sbjct: 441 CSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 490



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 107/220 (48%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M +R  S +S+ Y   I    + GK+ +A  L Q++ ++G+ P    +  LI G   A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
            +++      M  R   PS   +N MI   C+ G  ++A  ++   ++ G  P+ +TY+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           ++ G  K   ++E L L+ EME    +P   ++ ++I  LCQ  K+++A + F  M++  
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + P    Y  L+    + G   +A  L + M+  G+ PS 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSA 220



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 51/338 (15%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + AF + + +   G    +++++TLI  +    R D    + + M++    P   T  T
Sbjct: 271 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRML 120
           LI  LCK G+++   ++LD +     SP V+   +L+    R  Q ER  E   LL  M+
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE---LLSDMV 387

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y+ +V    K   L  A  V+ +M   G + N F YT  I  +C  G+++
Sbjct: 388 ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 447

Query: 181 EANCLMQEMENAGLKP-------------------------------------YDETFNL 203
               L  EM  AG+ P                                      DE +  
Sbjct: 448 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRF 507

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
            ++G  +A ++E +L +   M+    LP+      ++  LC+ G   +A  +L   +D  
Sbjct: 508 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD-- 565

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                + Y     G A +  ++E++   YE+E   + P
Sbjct: 566 -----LAYGGKARGKAAK-FVEEMVGKGYEIEDAVLGP 597


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 183/352 (51%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
             +++ ++IH + ++ +     +++  ML     P+E T   LI   CK G+++    + 
Sbjct: 391 DFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLH 450

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +++  K  +P V+  T+L+  + +   ++    LL  M  K +  +   Y+ ++    K+
Sbjct: 451 NQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKV 510

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+E A+ + EEM   GF  ++  YTT + AYC+ G++ +A+ L++ M + GL+P   TF
Sbjct: 511 GNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTF 570

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L+ G   +  +E+     + M+ + ++P+ + FN ++++ C   N +    +      
Sbjct: 571 NVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHA 630

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  P+  TY+ LI G+ K   ++E   L+ EM  K  S T  +Y SLI    +  K EE
Sbjct: 631 QGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEE 690

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A K F+ M++H  +   +IY+  V ++ E+GN    L LC+E + + L   T
Sbjct: 691 ARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT 742



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 171/356 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+++G   +  ++N++I  + K+ R     ++ + M     +P+     TLIS   K G 
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGN 372

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     + D +  K+  P  +  TS+I  + Q  ++ E   L   ML K +  D + Y+ 
Sbjct: 373 VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTA 432

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   ++ A  ++ +M+++G + N   YT  +   C+ G+++ AN L+ EM   G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P   T+N LI G  K   IE+++   E+M      P    +  ++   C+ G   +A+
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L + LDKG  P  +T++ L+ G+   G +++  +L   M  K I P    + SL+   
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C    +    + +K M +  +VP  + Y  L+  H +  N  +A  L +EMV +G 
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 151/280 (53%), Gaps = 1/280 (0%)

Query: 95  VNTSLILRII-QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
           V+ ++IL ++ Q  +++E   LL +M  +  + D ++YS+IV    ++  L   L + EE
Sbjct: 253 VSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEE 312

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           + ++G   N + Y + I   C+ G++ EA  +++ M+N  + P +  +  LI G  K+  
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGN 372

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           +       ++M  +K++P    +  MI  LC+ G   +A  + +  L KG  P+E+TY+ 
Sbjct: 373 VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTA 432

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI GY K GE++E   L+ +M  K ++P +  YT+L+  LC+CG+++ A++    M    
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L P V  Y +L+    + GN  +A+ L EEM   G  P T
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 177/372 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V R   + G   + +S+N ++H++ +  +      +   M      P+  +   ++ 
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+  QL   + +++ +  K   P      S+I  + +  R+ E   +L+ M  + +  
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++    K  N+     +++EM ++    +   YT+ I   C+ GK+ EA  L 
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + GLKP + T+  LI+G  KA  ++E+ S   QM+ + L P+   +  ++  LC+C
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    AN +L    +KG  PN  TY+ LI G  K G I++ +KL  EM+     P    Y
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+++ + C+ G++ +A +  +IM    L P +  +  L+      G       L + M+ 
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595

Query: 367 EGLKPSTSYLCS 378
           +G+ P+ +   S
Sbjct: 596 KGIMPNATTFNS 607



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 177/361 (49%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E RG    ++S++ ++    + ++   V ++ + +      PN+ T  ++IS LCK G+
Sbjct: 278 MEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGR 337

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L  +  +R  P  +V T+LI    +   +     L   M RK ++ D + Y+ 
Sbjct: 338 VVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS 397

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   +   +  A  ++ EML +G   +   YT  I  YC+ G+++EA  L  +M   G
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+  L++G  K   ++ +     +M  + L P+   +N +I  LC+ GN +QA 
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++      GF P+ ITY+ ++  Y K GE+ +  +L   M  K + PT+  +  L++  
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C  G LE+ ++  K M    ++P    + SL+  +  + N    + + + M ++G+ P T
Sbjct: 578 CMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDT 637

Query: 374 S 374
           +
Sbjct: 638 N 638



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/261 (20%), Positives = 116/261 (44%), Gaps = 35/261 (13%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A ++   + ++G   ++ ++N LI+ + K    +   ++ + M     +P+  T  T+
Sbjct: 479 DIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTI 538

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML---- 120
           + A CK G++    ++L  +  K   P ++    L+        +E+G  L+K ML    
Sbjct: 539 MDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGI 598

Query: 121 ----------------RKNM---------------IHDTIAYSLIVYAKVKMRNLESALV 149
                           R NM               + DT  Y++++    K RN++ A  
Sbjct: 599 MPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWF 658

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +++EM+++GFS  +  Y + I  + +  K EEA  L +EM   G     E +++ ++   
Sbjct: 659 LHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNY 718

Query: 210 KAKRIEESLSYCEQMMSRKLL 230
           +    E +L  C++ + + L+
Sbjct: 719 EEGNWENTLELCDEAIEKCLV 739


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 173/346 (50%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            ++ +LI    K+      W++   ML+     N  T   L+  LCK G++    ++   
Sbjct: 430 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 489

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +     SP   V T+L+   I+ ER+E+ M +LK+M   N+  D I Y  I++     R 
Sbjct: 490 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 549

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           LE   ++ EEM  RG SAN  + TT I AY + GK  +A    QEM++ G++    T+ +
Sbjct: 550 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 609

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  KA  +E ++ Y  +M+S  L P+ + +  +I  LC+    + A  +      +G
Sbjct: 610 LIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRG 669

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +P+   ++ LI G  K G +QE L L   M   +I   L  YTSL+S   QCG+L +A 
Sbjct: 670 MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQAR 729

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           K+F  M    ++P   +   L+  + ++G   +A+ L  EM   GL
Sbjct: 730 KFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 158/353 (44%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S N L+H ++KS    LV + +  M+     P+  T   +I  LCK G L+    +  ++
Sbjct: 256 SCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQM 315

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                SP V+   SLI    +   +EE   L   M     + D I Y+ ++    K   +
Sbjct: 316 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKM 375

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A   + EM   G   N   Y+T I A+C+ G ++ A  L  +M   GL P + T+  L
Sbjct: 376 PRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSL 435

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   KA  + E+      M+   +  +   +  ++  LC+ G   +A  +    L  G 
Sbjct: 436 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 495

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           SPN+  Y+ L+ GY K   +++ +K+  +M   +I P L  Y S+I   C   KLEE   
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
             + MKS  +     I  +++  + + G  + AL+  +EM   G++ +    C
Sbjct: 556 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 608



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 161/361 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G S  ++++N+LI    K    + V  ++  M +    P+  T   LI+  CK  +
Sbjct: 315 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 374

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    +    +      P V+  ++LI    +E  ++  + L   M R  ++ +   Y+ 
Sbjct: 375 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTS 434

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K  NL  A  +  +ML+ G   N   YT  +   C+ G++ EA  + + M   G
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P  + +  L+ G  KA+R+E+++   +QM    + P    +  +I   C     ++  
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 554

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L     +G S N +  + +I  Y K G+  + L  + EM+   +  T+  Y  LI  L
Sbjct: 555 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 614

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G +E A  YF  M S  L P V +Y SL+    +      A  L +EM   G+ P  
Sbjct: 615 CKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDI 674

Query: 374 S 374
           +
Sbjct: 675 T 675



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 153/343 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I++N LI+   K ++    +  +  M  N   PN  T  TLI A CK G +Q  + + 
Sbjct: 358 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLF 417

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +      P     TSLI    +   + E   LL  ML+  +  + + Y+ ++    K 
Sbjct: 418 VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 477

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A  V+  MLK G S N  VYT  +  Y +  ++E+A  ++++M    +KP    +
Sbjct: 478 GRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILY 537

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I G    +++EE+    E+M SR +  +      +I    + G +  A        D
Sbjct: 538 GSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 597

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G     +TY  LI G  K G ++  +  +  M    + P +  YTSLI  LC+   +E 
Sbjct: 598 VGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIES 657

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A K F  M+   + P +  + +L+  +L+ GN  +AL L   M
Sbjct: 658 AKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 700



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 143/321 (44%), Gaps = 1/321 (0%)

Query: 50  LENIR-YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           + N R  P   +   L+  L K G  Q      + + G   +P V     +I  + +E  
Sbjct: 245 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 304

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E    L  +M    +  D + Y+ ++    K+ +LE    ++ EM   G   +   Y  
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  YC++ K+  A     EM+N GLKP   T++ LI+   K   ++ ++     M    
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           LLP+   +  +I   C+ GN  +A  +L   L  G   N +TY+ L+ G  K G + E  
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +++  M    ISP    YT+L+    +  ++E+A K  K M   ++ P + +Y S++  H
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544

Query: 349 LEKGNKAKALHLCEEMVSEGL 369
             +    +   + EEM S G+
Sbjct: 545 CSQRKLEETKLILEEMKSRGI 565



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%)

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
           + S V+      + E G +EEAN     M N    P   + N L+   +K+   +    +
Sbjct: 217 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKF 276

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
              M+   + PS   +N MI  LC+ G+ + +  +     + G SP+ +TY+ LI GY K
Sbjct: 277 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 336

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G ++EV  L+ EM+     P +  Y  LI+  C+  K+  A +YF  MK++ L P V  
Sbjct: 337 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 396

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           Y +L+    ++G    A+ L  +M   GL P+
Sbjct: 397 YSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPN 428



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 2/288 (0%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLISA 67
           +V R + + G S +   +  L+H   K++R +   +I + M E NI+ P+     ++I  
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK-PDLILYGSIIWG 543

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            C   +L+    +L+ +  +  S   +++T++I    +  +  + +   + M    +   
Sbjct: 544 HCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEAT 603

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + Y +++    K   +E A+  +  ML  G   N  VYT+ I   C+   IE A  L  
Sbjct: 604 IVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFD 663

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM+  G+ P    F  LI+G  K   ++E+L    +M    +      +  ++    +CG
Sbjct: 664 EMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCG 723

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
              QA       ++KG  P E+    L+  Y K G++ E ++L  EME
Sbjct: 724 ELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 771



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 87/188 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  + ++  G   +++++  LI  + K+   +L    +  ML     PN A   +LI 
Sbjct: 588 ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 647

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK   +++   + D +  +  +P +   T+LI   ++   ++E +VL+ RM    +  
Sbjct: 648 GLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 707

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ +V    +   L  A   + EM+++G      +    +  Y + G+++EA  L 
Sbjct: 708 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELK 767

Query: 187 QEMENAGL 194
            EME  GL
Sbjct: 768 NEMERMGL 775


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 181/373 (48%), Gaps = 2/373 (0%)

Query: 2   RLFEVAF--DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           RL  V F   V   + + G     I+FNTLI+             ++  M+     P+  
Sbjct: 139 RLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVI 198

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           +  T+I+ LCK G     + +L ++  K C P ++  T++I  + ++  + + M LL  M
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           + + +  D + YS I++    + +L  A +++ EM+ R    N+  +T  +   C+ G +
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            EA C+ + M   G +P   T+N L++G     +++E+    + M+ +   P   ++N +
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNIL 378

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I   C+     +A  +L    +K  +P+ +TYS L+ G  + G  QE L L+ EM    +
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P L  Y++L+  LC+ G L+EA K  K M+   + P + +Y  L+      G    A  
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKE 498

Query: 360 LCEEMVSEGLKPS 372
           L  ++ ++G++P+
Sbjct: 499 LFSKLFADGIQPT 511



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 179/358 (50%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG    +IS++T+I+ + KS    +  ++ + M E    PN     T+I +LCK   + 
Sbjct: 190 RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVN 249

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +D+L  +  +   P V+  ++++        + E  +L   M+ +N++ +T+ ++++V
Sbjct: 250 DAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILV 309

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +  A  V+E M K+G   N++ Y   +  YC   +++EA  ++  M + G  
Sbjct: 310 DGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA 369

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N+LI G  K +R++E+ S   +M  ++L P    ++ +++ LC+ G  ++A  +
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNL 429

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G  P+ +TYS L+ G  K G + E LKL   M+   I P +  Y  LI  +  
Sbjct: 430 FKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI 489

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE A + F  + +  + P +  Y  ++   L++G   +A  L  +M  +G  P++
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNS 547



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 147/316 (46%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N  ++  LI+ LC+   +   + +L ++      P  I   +LI     E  I+E + L 
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M+R+    D I+YS ++    K  N   AL +  +M ++G   N   YTT I + C+ 
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
             + +A  L+ EM + G+ P   T++ ++ G      + E+     +M+ R ++P+   F
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             ++  LC+ G   +A  +      KG  PN  TY+ L+ GY    ++ E  K+   M  
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K  +P + +Y  LI+  C+  +L+EA      M    L P    Y +L+    + G   +
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425

Query: 357 ALHLCEEMVSEGLKPS 372
           AL+L +EM S GL P 
Sbjct: 426 ALNLFKEMCSSGLLPD 441



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/335 (21%), Positives = 148/335 (44%), Gaps = 1/335 (0%)

Query: 39  NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           +D +   Y+ +  N R P+       + ++ K  Q  T V + +++     +  V     
Sbjct: 74  DDALASFYRMLRMNPR-PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI  + +   +   + +L +M +  +  D I ++ ++  +     ++ A+ ++ EM++RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              +   Y+T I   C+ G    A  L+++ME  G KP    +  +I+   K   + +++
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
               +M+ R + P    ++ ++   C  G+  +A  +    + +   PN +T++ L+ G 
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG + E   ++  M  K   P    Y +L+   C   +++EA K   IM      P V
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             Y  L+  + ++    +A  L  EM  + L P T
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDT 407



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 135/288 (46%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++F  L+  + K         +++ M +    PN  T   L+   C   Q+     +LD 
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C+P+V     LI    +  R++E   LL  M  K +  DT+ YS ++    ++  
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            + AL +++EM   G   +   Y+T +   C++G ++EA  L++ M+ + ++P    +N+
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNI 482

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LIEG   A ++E +     ++ +  + P+   +  MI+ L + G + +A  +     D G
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           F PN  +Y+ +I G+ +  +    ++L  EM  K  S     +  L+ 
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 120/264 (45%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I++ +    RMLR N     + +   + +  K +   + + +  +M   G + N +    
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C    +  A  ++ +M   G++P   TFN LI G      I+E++    +M+ R 
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P   +++ +I  LC+ GN   A  +L    +KG  PN + Y+ +I    K+  + + +
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            L  EM  + I P +  Y++++   C  G L EA   F  M   +++P    +  LV   
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G  ++A  + E M  +G +P+
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPN 336



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 104/231 (45%)

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           +++ AL  +  ML+     +   +  F+G+  +  +      L  +M+  G+     + N
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +LI    +   +  ++S   +M    + P    FN +I   C  G  K+A G+    + +
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P+ I+YS +I G  K G     L+L  +ME K   P L AYT++I SLC+   + +A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                 M    + P V  Y +++      G+  +A  L  EMV   + P+T
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNT 302



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/227 (18%), Positives = 91/227 (40%), Gaps = 35/227 (15%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++  +   ++++TL+  + +  R      +++ M  +   P+  T  TL+  LCK G 
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 457

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L                                   +E + LLK M    +  D + Y++
Sbjct: 458 L-----------------------------------DEALKLLKSMQESKIEPDIVLYNI 482

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        LE A  ++ ++   G       YT  I    + G  +EA  L ++ME+ G
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
             P   ++N++I+G  + +    ++   ++M+ ++     S F  ++
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/160 (18%), Positives = 79/160 (49%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + +   G    L++++TL+  + K    D   ++ + M E+   P+      LI 
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +   G+L+   ++  ++      P +   T +I  +++E   +E   L ++M     + 
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           ++ +Y++I+   ++ ++  +A+ + +EM+ + FSA+S  +
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 182/372 (48%), Gaps = 1/372 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++  + L QRG+  +   FN +IH      +      ++  M +    P+  +   L+ 
Sbjct: 267 AWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVD 326

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G + T   ML  +     +P ++  +SL+  + +  R+E    L KR+  +   H
Sbjct: 327 GLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKH 386

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS++++   +  +LE    ++ +M+   F  +++ Y++ I AYC + +++EA  + 
Sbjct: 387 DHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVF 446

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G+ P   T  +L+ G +    I E+  + +++    ++P+   +  +I  LC+ 
Sbjct: 447 ELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKV 506

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                  G+    + +G+ P+ + YS +I G+ K  ++QE  +LYY+M  +   P +  Y
Sbjct: 507 NKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTY 566

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI+ LC   KL E    FK M    L P   +Y SL+  + ++ N   AL +  EM +
Sbjct: 567 TSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMET 626

Query: 367 EGLKP-STSYLC 377
           EGL   S  Y C
Sbjct: 627 EGLSADSFVYTC 638



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 153/332 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF++ + L+ +GF    I ++ ++H   +    ++ + ++  M+ +   P+     +L
Sbjct: 370 ELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSL 429

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A C+  QL+  +++ + +      P V+  T L+     E  I E  + L ++ +  +
Sbjct: 430 IYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGV 489

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + +   Y +I+    K+        ++ +M+KRG+  ++ +Y+  I  + +   ++EA  
Sbjct: 490 VPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFR 549

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M + G KP   T+  LI G     ++ E ++  + M+   L P    +  +I   C
Sbjct: 550 LYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYC 609

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  N K A  +      +G S +   Y+ LIGG++K   +        EM  K ++PT+ 
Sbjct: 610 KRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVV 669

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            YT LI    + G  ++A   +  M    + P
Sbjct: 670 TYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAP 701



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/364 (18%), Positives = 163/364 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G + +L+S+++L+H + ++ R +L + +++ + +     +      ++   C+   
Sbjct: 344 MARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLD 403

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+   D+ + +      P     +SLI    +  +++E + + + M+   +  + +  ++
Sbjct: 404 LEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTI 463

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V+       +  A +  +++ + G   N   Y   I   C+  K  +   +  +M   G
Sbjct: 464 LVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRG 523

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    ++++I+G  KA  ++E+     +M+     P+   +  +I  LC      +  
Sbjct: 524 YVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVM 583

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    + +G +P+ I Y+ LI  Y K   ++  L+++ EME + +S     YT LI   
Sbjct: 584 TLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGF 643

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +   ++ A  + + M +  L P V  Y  L+  + + G++ KA+ +   M+  G+ P  
Sbjct: 644 SKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDA 703

Query: 374 SYLC 377
              C
Sbjct: 704 KLSC 707



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 140/311 (45%), Gaps = 2/311 (0%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI--EEGMVLLKRMLR 121
           L+  L +G Q+     + D +     SP +   + L+       ++  EE   LL  M  
Sbjct: 182 LLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEV 241

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  +   Y   +Y   + + ++SA    + + +RG+  NS+ +   I  +C  G++ +
Sbjct: 242 EGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHK 301

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   M+  G  P   ++++L++G  K   +        +M    + P+  +++ ++ 
Sbjct: 302 AVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC  G  + A  +     D+GF  + I YS ++ G  +  +++    L+ +M + +  P
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y+SLI + C+  +L+EA + F++M    + P V     LV     +G   +A    
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 362 EEMVSEGLKPS 372
           +++   G+ P+
Sbjct: 482 DKVRQFGVVPN 492



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/157 (18%), Positives = 74/157 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +   G   ++ ++ +LI+ +   D+   V  +++HM+     P+     +LI+
Sbjct: 547 AFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIA 606

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK   ++  +++   +  +  S    V T LI    +   ++   + ++ M+ K +  
Sbjct: 607 CYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTP 666

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
             + Y+ ++    K+ + + A+V+Y  ML+ G + ++
Sbjct: 667 TVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDA 703


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 169/348 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F ++IH +    R D        ML     PN+  +  L+S LC+ G+    +++  R+
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K  +   + + +LI  + +    EE   LLK ML + ++ D+I+Y+ ++ A  K   +
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E    + EEM++RG   + + Y   +   C  GKIEEA  L  E +  G  P   T+ ++
Sbjct: 494 EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIM 553

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  KA R+EE     ++M++ K+  +   +  +IR  CE GN ++A  +      +G 
Sbjct: 554 IDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI 613

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
                TYS LI G +  G +    +L  EM  + +SP +  YT+LI   C+ G++ + D 
Sbjct: 614 PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDS 673

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + M  +++ P    Y  ++  H + GN   A  L  EM  +G+ P 
Sbjct: 674 ILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPD 721



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 177/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F V F++   L  +G   SL + N L+  + K++   + ++++  M      P+     T
Sbjct: 143 FGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFST 202

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++A C GG++   +++  ++     +P V+   ++I  + +  R++E     ++M ++ 
Sbjct: 203 MVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER 262

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + Y +++   VK+   + A  + +EM  RG++ N+ VY T I  YC  G I  A 
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTAL 322

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M + G+ P   T N LI+G  K+ ++E +    E+M++   + +   F  +I RL
Sbjct: 323 QIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRL 382

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C       A   +   L + F PN+   + L+ G  + G+  E ++L+Y +  K  +   
Sbjct: 383 CLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANT 442

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               +LI  LC+ G  EEA K  K M    LV     Y +L+    ++G   +   L EE
Sbjct: 443 VTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEE 502

Query: 364 MVSEGLKPS 372
           MV  G++P 
Sbjct: 503 MVRRGIQPD 511



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 172/373 (46%), Gaps = 8/373 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  + + +  RG++ + + +NTLI    +        +I   M+ N   PN  T  +
Sbjct: 283 FDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNS 342

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN----TSLILRIIQEERIEEGMVLLKRM 119
           LI   CK  Q++    +L+ +     +   ++N    TS+I R+  + R +  ++ +  M
Sbjct: 343 LIQGYCKSNQMEHAEHLLEEM----LTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEM 398

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L +N   +    +L+V    +      A+ ++  +L++GF+AN+      I   CE G  
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK 458

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           EEA  L++EM   GL     ++N LI  C K  ++EE     E+M+ R + P    +N +
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNML 518

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           +  LC  G  ++A G+       G  P+  TY  +I GY K   ++E  KL+ EM    I
Sbjct: 519 LHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKI 578

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
                 Y +LI + C+ G + EA +    M+S  +      Y SL+      G    A  
Sbjct: 579 EQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQ 638

Query: 360 LCEEMVSEGLKPS 372
           L +EM  EGL P+
Sbjct: 639 LLDEMRKEGLSPN 651



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 181/427 (42%), Gaps = 71/427 (16%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +  +  F+T+++      R D    +++ M +    PN  T   +I  LCK G+L   
Sbjct: 192 GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEA 251

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
               +++  +R  P ++    LI  +++ ER +E   +LK M  +    + + Y+ ++  
Sbjct: 252 FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG---- 193
             ++ N+ +AL + ++M+  G S NS    + I  YC+  ++E A  L++EM   G    
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371

Query: 194 -------------------------------LKPYDETFNLLIEGCAKAKRIEESLSYCE 222
                                           KP D    LL+ G  +  +  E++    
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +++ +    +    N +I  LCE G+ ++A  +L   L++G   + I+Y+ LI    KEG
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG 491

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA-------------------- 322
           +++E  KL  EM  + I P +  Y  L+  LC  GK+EEA                    
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG 551

Query: 323 ---------------DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
                          +K F+ M +  +     +Y +L+  + E GN  +A  L ++M S 
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611

Query: 368 GLKPSTS 374
           G+ P TS
Sbjct: 612 GI-PQTS 617



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 158/343 (46%), Gaps = 1/343 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   L ++GF+ + ++ N LIH + ++   +   ++ + MLE     +  +  TLI 
Sbjct: 426 AIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLIL 485

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G+++    + + +  +   P +     L+  +    +IEE   L     +     
Sbjct: 486 ACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFP 545

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y +++    K   +E    +++EM+      N+ VY T I AYCE G + EA  L 
Sbjct: 546 DAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLR 605

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M + G+     T++ LI G +    ++ +    ++M    L P+   +  +I   C+ 
Sbjct: 606 DDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKL 665

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   + + +L         PN+ITY+ +I G+ K G ++   KL  EM  K I P    Y
Sbjct: 666 GQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTY 725

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIH 348
            +L +  C+ GK+EEA K   +M +  +      Y +L+ G H
Sbjct: 726 NALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWH 768



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 122/245 (49%)

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++ + VK   ++ +  V++ M   G + + ++++T + A+C  G++++A  L ++ME 
Sbjct: 166 NFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEK 225

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+N +I G  K  R++E+  + E+M   ++ PS   +  +I  L +     +
Sbjct: 226 VGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDE 285

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           AN +L    D+G++PN + Y+ LI GY + G I   L++  +M    ISP      SLI 
Sbjct: 286 ANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ 345

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+  ++E A+   + M +   V     + S++     K     AL    EM+    KP
Sbjct: 346 GYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKP 405

Query: 372 STSYL 376
           +   L
Sbjct: 406 NDGLL 410



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 125/276 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E  F +   + +RG    + ++N L+H +    + +    ++    +N  +P+  T   +
Sbjct: 494 EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIM 553

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK  +++    +   +   +     +V  +LI    +   + E   L   M  + +
Sbjct: 554 IDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI 613

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +  YS +++    +  ++SA  + +EM K G S N   YT  IG YC+ G++ + + 
Sbjct: 614 PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDS 673

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++QEM    + P   T+ ++I G  K   ++ +     +M  + ++P    +N +    C
Sbjct: 674 ILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
           + G  ++A  +  L    G S ++ITY+ LI G+ K
Sbjct: 734 KEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 175/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   ++++G   ++ ++  LI  + K ++ D   ++   M E    P+  T   LI 
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G +    ++LD +    C P       LI  + ++ ++ + M LL +ML + +  
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             I Y+ +++ + K+ +LESA  +   M + G   + + Y+ FI   C+ G++EEA  L 
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             ++  G+K  +  +  LI+G  K  +I+ + S  E+M++   LP+   +N +I  LC+ 
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+A+ ++   L  G  P  +TY+ LIG   K+G     LK++  M      P +  Y
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+ + +    G LEE D     M    ++P +  Y  L+  +   G   +A    + MV 
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677

Query: 367 EGLKPS 372
            G KPS
Sbjct: 678 TGCKPS 683



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 155/332 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G   S++++N LI    K    D  + I   M  N   PN  T   LI  LCK  +
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +L+++  ++ SP +I   SLI    +   +E    LL  M    ++ D   YS+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +    K   +E A  +++ +  +G  AN  +YT  I  YC+ GKI+ A  L++ M N  
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N+LIEG  K K+++E+ S   +M++  + P+   +  +I  + + G    A 
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    +  G+ P+  TY+  +  Y  +G ++EV  +  +M  + I P L  YT LI   
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            + G    A  + K M      P + I   L+
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 163/367 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++V   + Q+G   + +S+  LIH + ++ R +   +++  M E+   P   T   LI 
Sbjct: 248 AYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIY 307

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL   G+    +++ + +  K C P V   T LI  + +E +++E   +L  M  K +I 
Sbjct: 308 ALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIP 367

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ ++    K   ++ A  + + M       N+  Y   I   C+  K+ +A  L+
Sbjct: 368 SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALL 427

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M    L P   T+N LI G  K   +E +      M    L+P    ++  I  LC+ 
Sbjct: 428 NKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +      KG   NE+ Y+ LI GY K G+I     L   M   +  P    Y
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI  LC+  K++EA      M +  + P V  Y  L+G  L+ G    AL +   MVS
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 367 EGLKPST 373
            G +P  
Sbjct: 608 LGYQPDV 614



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 169/359 (47%), Gaps = 2/359 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q G      ++ +LI    ++   D  + ++  M +     NE +   LI  LC+ G++ 
Sbjct: 222 QAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +   +    C P V   T LI  +    R  E + L   M  K    +   Y++++
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   ++ A  +  EM ++G   +   Y   I  YC+ G I++A  ++  ME+    
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  K +++ ++++   +M+ RKL PS   +N +I   C+  + + A  +
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L+L  + G  P++ TYS  I    KEG ++E   L+  ++ K +      YT+LI   C+
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK++ A    + M + + +P    Y  L+ G+  EK  K +A  L  +M++ G+KP+ 
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK-EASSLVAKMLTMGVKPTV 579



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 176/398 (44%), Gaps = 55/398 (13%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S SLI++N+LIH   K +  +  +R+   M EN   P++ T    I  LCK G+++
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 76  ---TYVD--------------------------------MLDRIHGKRCSPMVIVNTSLI 100
              T  D                                +L+R+    C P       LI
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 101 LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
             + +E++++E   L+ +ML   +    + Y++++   +K    + AL V+  M+  G+ 
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            +   YT F+ AY   G +EE + ++ +M   G+ P   T+ +LI+G A+      +  +
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL------------------ALDK 262
            + M+     PS    + +I+ L      K+    + +                   ++ 
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEH 731

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G + +   Y  LI G+ ++  ++E   L + M+ + +SP+   Y SL+   C+ G   EA
Sbjct: 732 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 791

Query: 323 DKYFKIMKSHSLVPGVDIYESLV-GIHLEKGN-KAKAL 358
            +    M  + L+P ++ Y+ LV G+++E  N KAKA+
Sbjct: 792 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 829



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 146/354 (41%), Gaps = 35/354 (9%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  +L  +NT++  ++K    D +  +Y  +L N   PN  T   +++  CK G      
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGN----- 209

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
                                         + E  +   ++++  +  DT  Y+ ++   
Sbjct: 210 ------------------------------VVEAELYASKIVQAGLHPDTFTYTSLILGH 239

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            + + +++A  V+  M ++G   N   YT  I   CE G+I EA  L  +M      P  
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+ +LI   + + R  E+L+   +M  +   P+   +  +I  LC+     +A  ML+ 
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
             +KG  P+ +TY+ LI GY KEG I +  ++   ME  S  P    Y  LI  LC+  K
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + +A      M    L P +  Y SL+    +  +   A  L   M   GL P 
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 134/310 (43%), Gaps = 17/310 (5%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  V  ++   G+   + ++   +H        + V  +   M E    P+  T   
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    + G      D L  +    C P + + + LI  +  E R++E         R  
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET--------RSE 706

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D+++ +L           E AL ++E+M++ G + +  +Y   I  +C+  ++EEA 
Sbjct: 707 IGIDSVSNTL---------EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 757

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  M+  G+ P ++ +N L++ C K     E++   + M+   LLP   ++  ++  L
Sbjct: 758 GLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 817

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G+ ++A  +    L  G++ +E+ +  LI G  K   + E  +L   ME K   P  
Sbjct: 818 YIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNP 877

Query: 304 PAYTSLISSL 313
             Y+ LI  L
Sbjct: 878 LTYSLLIEGL 887



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 86/180 (47%)

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            KP    +N ++   +K   I+E  +   ++++ ++ P+   FN M+   C+ GN  +A 
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
              +  +  G  P+  TY+ LI G+ +   +    +++  M  K       +YT+LI  L
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G++ EA K F  M   +  P V  Y  L+      G K +AL+L  EM  +G +P+ 
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 176/371 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + + +  RG    L+SF+ LI +  +  + D      + M      P+      +
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G +   + + D + G  C P V+   +L+  + +E R+ +   LL  M  + +
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   ++ +++       L+ AL +++ ML +    +   Y T I   C  G +++AN 
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M +  + P   T+++LI+   +  ++E++  + ++M+++ +LP+   +N +I+  C
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             GN  +    L   +    SP+ ITY+ LI GY KE ++ +  KL   ME + + P + 
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 577

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  LI+     G ++EA   F+ M +  + P    Y S++  H+  GN  +A  L +EM
Sbjct: 578 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637

Query: 365 VSEGLKPSTSY 375
           +  G  P   +
Sbjct: 638 LQRGFAPDDKF 648



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 177/367 (48%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A D  R +      ++  + N ++H   K+   D V  +   M +   +P+  T   ++
Sbjct: 139 LAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMV 198

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A  + G  +  + ++D +  K   P ++   S++  + +    ++   + K M    + 
Sbjct: 199 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 258

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D  ++++++    ++  +E AL +Y+EM  RG   +   ++  IG +   GK++ A   
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++EM   GL P    + ++I G  +A  + ++L   ++M+    LP    +N ++  LC+
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A G+L    ++G  P+  T++ LI GY  EG++ + L+L+  M  + + P +  
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI  +C+ G L++A+  +  M S  + P    Y  L+  H EKG    A    +EM+
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498

Query: 366 SEGLKPS 372
           ++G+ P+
Sbjct: 499 NKGILPN 505



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 175/369 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +  +G    ++++N+++  + +S   D  W +++ M +    P+  +   L
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G+++  + +   +  +   P ++  + LI    +  +++  M  L+ M    +
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 327

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + Y++++    +   +  AL V +EM+  G   +   Y T +   C+  ++ +A  
Sbjct: 328 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 387

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM   G+ P   TF  LI G     +++++L   + M++++L P    +N +I  +C
Sbjct: 388 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 447

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+  +AN +      +   PN +TYS LI  + ++G++++      EM  K I P + 
Sbjct: 448 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 507

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y S+I   C+ G + +  K+ + M  + + P +  Y +L+  ++++     A  L   M
Sbjct: 508 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 567

Query: 365 VSEGLKPST 373
             E ++P  
Sbjct: 568 EKEKVQPDV 576



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 164/369 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+    V   +E+R     +++ N ++    ++   +    +   M+     P   T  +
Sbjct: 172 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 231

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++  LC+ G      ++   +     +P V   T LI    +   IEE + + K M  + 
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D +++S ++    +   ++ A+    EM   G   +  +YT  IG +C  G + +A 
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  EM   G  P   T+N L+ G  K +R+ ++     +M  R + P    F  +I   
Sbjct: 352 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 411

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A  +    L++   P+ +TY+ LI G  ++G++ +   L+ +M  + I P  
Sbjct: 412 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 471

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI S C+ G++E+A  +   M +  ++P +  Y S++  +   GN +K     ++
Sbjct: 472 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 531

Query: 364 MVSEGLKPS 372
           M+   + P 
Sbjct: 532 MMVNKVSPD 540



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 71/178 (39%)

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    F+LLI    ++++  E+      ++  ++    +A N ++  L   G    A   
Sbjct: 84  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 143

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             L        N  T + ++  Y K  E  +V  +  EME + + P +  +  ++ +  +
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G  E A      M S  L PG+  Y S++      G   KA  + +EM   G+ P  
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 261


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 185/347 (53%), Gaps = 1/347 (0%)

Query: 26  FNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           FN+++  ++ ++ R + V R+   M++    PN+A +      LC+G + Q  V +  ++
Sbjct: 409 FNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKM 468

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K     +  + +LI  + + + ++    +L+ M+ K M  D I Y++++    K   +
Sbjct: 469 LEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKI 528

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E AL + ++M+++GF  +++++ + I AYC+ GK+EEA  L+ +M+  G++P   ++  +
Sbjct: 529 EEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTI 588

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  KAK I+++  Y  ++M+  L P+   +N +I      GN   A G+L      G 
Sbjct: 589 IDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGI 648

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  +TY  L+      G + E   ++ +    SI   +  YT +I  LC+ GK++EA  
Sbjct: 649 QPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMN 708

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           YF+ M+S S+ P    Y +L+  + + GN  +A  L +EMVS G+ P
Sbjct: 709 YFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVP 755



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 167/354 (47%), Gaps = 1/354 (0%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S   + +N L+  + KS R D   R+   M E+   P+  T   LI+ L +  +      
Sbjct: 263 SAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGA 322

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +L  + G   +P  ++   LI    ++    E + L   M+ K M    + Y+LI  A  
Sbjct: 323 LLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALC 382

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE-YGKIEEANCLMQEMENAGLKPYD 198
           K   +E A  + EEML  G + +S ++ + +    +  G++E    L+ EM   G+KP D
Sbjct: 383 KEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPND 442

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
                  +   + +R +E++    +M+ + L  + +  N +I  LCE  N K A  +L  
Sbjct: 443 ALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRT 502

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            ++KG   + ITY+ +I G  K+ +I+E LKL  +M  K   P    + S+I + C  GK
Sbjct: 503 MVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGK 562

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +EEA      MK   + P V  Y +++  + +  +  KA     E+++ GLKP+
Sbjct: 563 MEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPN 616



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 144/321 (44%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A  +   + ++G  +++ + N LIH + +         + + M+      +  T 
Sbjct: 456 RRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITY 515

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I   CK  +++  + + D +  K   P   +  S+I       ++EE + LL +M  
Sbjct: 516 NIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKI 575

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  D ++Y  I+    K ++++ A     E++  G   N+ +Y   IG Y   G I  
Sbjct: 576 EGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISG 635

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  ++  ME+ G++P + T+  L+     A  ++E+ +  EQ     +      +  MI+
Sbjct: 636 AIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQ 695

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G   +A         +   PN+ITY+ L+  Y K G  +E  KL+ EM    I P
Sbjct: 696 GLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVP 755

Query: 302 TLPAYTSLISSLCQCGKLEEA 322
              +Y +L++   Q   L++A
Sbjct: 756 DNVSYNTLVTGFSQVDSLDKA 776



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 130/257 (50%), Gaps = 6/257 (2%)

Query: 134 IVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           ++ A  +  NL +   V++EM   +  + N + YT+ I A C+ GK+++   ++ ++ +A
Sbjct: 199 LLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHA 258

Query: 193 GLKPYDET--FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           GL+       +NLL++   K+ R++E++    +M   ++ PS   F  +I  L       
Sbjct: 259 GLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFG 318

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +   +L      G +PNE+  + LI  + ++G   E ++L+ EM  K +  T   Y  + 
Sbjct: 319 EVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIA 378

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK-GNKAKALHLCEEMVSEGL 369
            +LC+ G++E A++  + M S  +     ++ S+V   L++ G     + L  EMV  G+
Sbjct: 379 RALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGM 438

Query: 370 KPSTSYL--CSASTCRG 384
           KP+ + +  C+   C+G
Sbjct: 439 KPNDALMTACTKQLCQG 455



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 3/180 (1%)

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMS-RKLLPSCSAFNEMIRRLCECGNAKQANG 254
           P  +T N L+E  A+   +  +    ++M   + + P+  ++  MI+ LC+ G       
Sbjct: 191 PSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFK 250

Query: 255 MLTLALDKGF--SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           +L+  +  G   S   + Y+ L+    K G + E ++L   ME   ++P++  +  LI+ 
Sbjct: 251 ILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILING 310

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L +  +  E     + M+   + P   I   L+  H  KG+  +A+ L +EMVS+ +K +
Sbjct: 311 LKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKST 370


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 2/373 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           R ++ A  V R + + G S ++ ++N +I  VV++ D    +  + +   E I  PN  T
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGIS-PNVVT 244

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI A CK  +++  + +L  +     +  +I   S+I  +  + R+ E   L++ M 
Sbjct: 245 YNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMR 304

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ D + Y+ +V    K  NL   LV+  EM+ +G S N   YTT I   C+ G + 
Sbjct: 305 GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  +  +M   GL+P + T+  LI+G  +   + E+     +M+     PS   +N ++
Sbjct: 365 RAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C  G  ++A G+L   +++G  P+ ++YS +I G+ +E E+ +  ++  EM  K + 
Sbjct: 425 HGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVL 484

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y+SLI  LC   KL EA   F+ M    L P    Y SL+  +   G  +KAL L
Sbjct: 485 PDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRL 544

Query: 361 CEEMVSEGLKPST 373
            +EMV  G  P  
Sbjct: 545 HDEMVQRGFLPDN 557



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 164/342 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E      R +E+ G S +++++NTLI    K  +      + + M       N  +  +
Sbjct: 223 LEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNS 282

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LC  G++    ++++ + GK   P  +   +L+    +E  + +G+VLL  M+ K 
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ ++    K  NL  A+ ++++M  RG   N   YTT I  +C+ G + EA 
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAY 402

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ EM  +G  P   T+N L+ G     R++E++     M+ R L P   +++ +I   
Sbjct: 403 KVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGF 462

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  M    ++KG  P+ +TYS LI G   + ++ E   L+ EM  + + P  
Sbjct: 463 CRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDE 522

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             YTSLI++ C  G+L +A +    M     +P    Y  L+
Sbjct: 523 VTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 5/269 (1%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK-----MRNLESALVVYEEMLKRGFSANS 163
           + + + LL    R       ++Y+ ++ A ++      R+ + A  V+ +M++ G S N 
Sbjct: 148 VPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNV 207

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y   I      G +E+    M++ME  G+ P   T+N LI+   K K+++E+++    
Sbjct: 208 YTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRA 267

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M    +  +  ++N +I  LC  G   +   ++     KG  P+E+TY+ L+ G+ KEG 
Sbjct: 268 MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGN 327

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           + + L L  EM  K +SP +  YT+LI+ +C+ G L  A + F  M+   L P    Y +
Sbjct: 328 LHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTT 387

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+    +KG   +A  +  EM+  G  PS
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPS 416



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 169/377 (44%), Gaps = 20/377 (5%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A+ V   +   GFS S++++N L+H      R      I + M+E    P+  +  
Sbjct: 397 LMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYS 456

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+I+  C+  +L     M + +  K   P  +  +SLI  +  ++++ E   L + M+R+
Sbjct: 457 TVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRR 516

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y+ ++ A      L  AL +++EM++RGF  ++  Y+  I    +  + + A
Sbjct: 517 GLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVA 576

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+ ++      P D T+N LIE C+  +                      +   +++ 
Sbjct: 577 KRLLLKLFYEESVPDDVTYNTLIENCSNNE--------------------FKSVEGLVKG 616

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C  G   +A+ +    L +   PN   Y+ +I G+++ G + +   LY E+E+ S +  
Sbjct: 617 FCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACH 676

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             A  +L+ +L + G  +E  +  + +     +    + + LV ++ ++GN    L++  
Sbjct: 677 TVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLT 736

Query: 363 EMVSEGLKPSTSYLCSA 379
           EM  +GL P      SA
Sbjct: 737 EMAKDGLLPDGGIHSSA 753



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 5/227 (2%)

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN-----LLIEGCAKAKRIE 215
           ++S V+   + +    G + +A  L+      G  P   ++N     LL    +  +  +
Sbjct: 130 SSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYD 189

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           ++      M+   + P+   +N +IR +   G+ ++  G +     +G SPN +TY+ LI
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
               K+ +++E + L   M    ++  L +Y S+I+ LC  G++ E  +  + M+   LV
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
           P    Y +LV    ++GN  + L L  EMV +GL P+     +   C
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINC 356


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 174/371 (46%), Gaps = 4/371 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FEVA  V   +   G   + ++++ LI+ +    R +    I++ ML +   PN  T   
Sbjct: 358 FEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNV 417

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C  G +Q    + D++     SP VI    +I    ++  +   M LL+ M    
Sbjct: 418 IIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNG 477

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  DT  Y+ ++    +   LE A  ++ EM++ G S N   Y   I  Y    K+++A 
Sbjct: 478 LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDAL 537

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M  +G  P   T+N++I G +K  RI E+ ++C +M+ + LLP+   +   I  L
Sbjct: 538 ALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGL 597

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G    A  +      + + PN  TYS LI G  +EG+ ++  +L  +       P +
Sbjct: 598 CKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNV 653

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT+L+  LC  G+  EAD+  + MK   L P  +IY +L+    +      AL + + 
Sbjct: 654 DTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDS 713

Query: 364 MVSEGLKPSTS 374
           MV+ G +P  S
Sbjct: 714 MVTTGFQPCLS 724



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 164/365 (44%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           DV   +   G   +L +FN +I ++    +      I  H+      P+  T  +LI   
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK G L    +M DR+    C P  +  ++LI  +  E R+EE M +L+ M+ K +    
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            AY++ + +         A+ +  +M KRG   N   YT  I      GK E A  +  +
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   GL P   T++ LI       R E +L+  E M+S   LP+   +N +I+  C  G 
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            ++A  +    L  G SPN ITY+ +I  Y K+G +   ++L   M+   +      Y +
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LIS   + GKLE A   F  M  H + P V  Y +++  +L       AL L  +MV  G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547

Query: 369 LKPST 373
             PS+
Sbjct: 548 NVPSS 552



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 4/317 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LIS L + G+ +  + +  ++      P  +  ++LI ++  E R E  + +
Sbjct: 340 PNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTI 399

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            + ML  + + +T  Y++I+     +  ++ A  ++++MLK G S N   Y   I  Y +
Sbjct: 400 FEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFK 459

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G +  A  L++ M+  GLK    T+  LI G ++  ++E + S   +M+   + P+   
Sbjct: 460 QGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVT 519

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I           A  +    ++ G  P+  TY+ +I G++K   I E      +M 
Sbjct: 520 YNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMV 579

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + + P +  YTS I  LC+ G+   A K F  MK     P +  Y SL+    ++G   
Sbjct: 580 KQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAE 639

Query: 356 KALHLCEEMVSEGLKPS 372
            A    E ++ +G +P+
Sbjct: 640 DA----ERLLDDGCEPN 652



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 161/354 (45%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  +L SF+TL+  + K D + L   +Y  ML +   PN  T   +I  LC  G++Q   
Sbjct: 163 FGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAE 222

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
            ++  I      P     TSLI+   +   ++    +  RM++     +++ YS ++   
Sbjct: 223 LIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGL 282

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
                LE A+ + EEM+ +G       YT  I + C+ G+  EA  L+ +M+  G  P  
Sbjct: 283 CSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNV 342

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           +T+  LI G ++  + E ++    +M++  L+P+   ++ +I +L   G  + A  +   
Sbjct: 343 QTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEW 402

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L     PN  TY+ +I G+   G IQ+   ++ +M     SP +  Y  +I    + G 
Sbjct: 403 MLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGY 462

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  A +  ++MK + L      Y +L+      G    A  L  EMV  G+ P+
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPN 516



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/378 (22%), Positives = 166/378 (43%), Gaps = 3/378 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++AF++   + + G   + ++++ LI+ +    R +    + + M++    P       
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTI 312

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I +LC  G+    V +L ++  + C P V   T+LI  + ++ + E  + +  +ML   
Sbjct: 313 PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADG 372

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++   + YS ++         E+AL ++E ML      N+  Y   I  +C  G I++A 
Sbjct: 373 LVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKAT 432

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M  AG  P   T+N++I    K   +  ++   E M    L      +  +I   
Sbjct: 433 AIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGF 492

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G  + A  +    ++ G SPN +TY+ +I GY    ++ + L L+++M      P+ 
Sbjct: 493 SRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSS 552

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +IS   +  ++ EA+ +   M    L+P V  Y S +    + G  + A  +  E
Sbjct: 553 GTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE 612

Query: 364 MVSEGLKPSTSYLCSAST 381
           M      P+   LC+ S+
Sbjct: 613 MKKRDYFPN---LCTYSS 627



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 135/295 (45%), Gaps = 4/295 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF +   + + G S +++++N +I+      + D    ++  M+E+   P+  T   
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNM 557

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +IS   K  ++    +   ++  +   P VI  TS I  + +  R      +   M +++
Sbjct: 558 MISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +   YS ++    +    E A    E +L  G   N   YTT +   C  G+  EA+
Sbjct: 618 YFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEAD 673

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ M+  GL+P +E +  L+ G  K   +E +L   + M++    P  S +  +I  L
Sbjct: 674 QLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICAL 733

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           C+    ++A  M    L K ++ +E+ ++ L+ G  KEGE    L+L + ME ++
Sbjct: 734 CKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRN 788


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 160/311 (51%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI  LCK  ++   V +   + GK   P V+   +L+  + + +  E G+ ++  MLR 
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRL 326

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  A S +V    K   +E AL + + + + G S N FVY   I + C+    +EA
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEA 386

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   M   GL P D T+++LI+   +  +++ +LS+  +M+   L PS   +N +I  
Sbjct: 387 ELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLING 446

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G+   A  ++   ++K   P  +TY+ L+GGY  +G+I + L+LY+EM  K I P+
Sbjct: 447 HCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPS 506

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  +T+L+S L + G + +A K F  M   ++ P    Y  ++  + E+GN +KA     
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLN 566

Query: 363 EMVSEGLKPST 373
           EM+ +G+ P T
Sbjct: 567 EMIEKGIVPDT 577



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 172/364 (47%), Gaps = 2/364 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + L  +     ++++ TL+  + K    ++   +   ML     P+EA + +L+ 
Sbjct: 281 AVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVE 340

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K G+++  ++++ R+     SP + V  +LI  + +    +E  +L  RM +  +  
Sbjct: 341 GLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCP 400

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + YS+++    +   L++AL    EM+  G   + + Y + I  +C++G I  A  LM
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLM 460

Query: 187 QEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM N  L+P   T+  L+ G C+K K I ++L    +M  + ++PS   F  ++  L  
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGK-INKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  + A  + T   +    PN +TY+ +I GY +EG + +  +   EM  K I P   +
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  LI  LC  G+  EA  +   +   +       Y  L+     +G   +AL +C++M 
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMG 639

Query: 366 SEGL 369
             G+
Sbjct: 640 LRGV 643



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 164/351 (46%), Gaps = 2/351 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++N +I    +       +     M+E    P+  + R LI  LC  GQ       +D 
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +H   C    I  T L+    +E ++EE + + + M  + +  D + Y +++   +K ++
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKD 662

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            +  L + +EM  RG   +  +YT+ I A  + G  +EA  +   M N G  P + T+  
Sbjct: 663 RKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE-CGNAKQANGMLTLALDK 262
           +I G  KA  + E+   C +M     +P+   +   +  L +  G+ K+A  +   A+ K
Sbjct: 723 VINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHN-AILK 781

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G   N  TY+ LI G+ ++G ++E  +L   M    +SP    YT++IS LC+   +++A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + +  M    + P    Y +L+      G   KA  L  EM+ +GLKP+T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNT 892



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 159/348 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           + + L+H + K     L   ++  M+     P+      +I +LC+   L    +M+ ++
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C   ++    LI  + +++++ E + + K +  K +  D + Y  +V    K++  
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEF 313

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E  L + +EML+  FS +    ++ +    + GK+EEA  L++ +   G+ P    +N L
Sbjct: 314 EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNAL 373

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   K +  +E+    ++M    L P+   ++ +I   C  G    A   L   +D G 
Sbjct: 374 IDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGL 433

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+   Y+ LI G+ K G+I     L  EM  K + PT+  YTSL+   C  GK+ +A +
Sbjct: 434 KPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  M    +VP +  + +L+      G    A+ L  EM    +KP+
Sbjct: 494 LYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPN 541



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 137/276 (49%), Gaps = 1/276 (0%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
           LI   ++  R+ +G+++ K M+ K +++ +    S +++  VK R+   A+ ++++M+  
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINV 221

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   + ++YT  I + CE   +  A  ++ +ME  G       +N+LI+G  K +++ E+
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   + +  ++L P    +  ++  LC+    +    M+   L   FSP+E   S L+ G
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             K G+++E L L   +    +SP +  Y +LI SLC+    +EA+  F  M    L P 
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN 401

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              Y  L+ +   +G    AL    EM+  GLKPS 
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSV 437



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 160/373 (42%), Gaps = 8/373 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FEV  ++   + +  FS S  + ++L+  + K  + +    + + + E    PN      
Sbjct: 313 FEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNA 372

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +LCKG        + DR+      P  +  + LI    +  +++  +  L  M+   
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG 432

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +      Y+ ++    K  ++ +A  +  EM+ +        YT+ +G YC  GKI +A 
Sbjct: 433 LKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM   G+ P   TF  L+ G  +A  I +++    +M    + P+   +N MI   
Sbjct: 493 RLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGY 552

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           CE GN  +A   L   ++KG  P+  +Y  LI G    G+  E       +   +     
Sbjct: 553 CEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI----YESLVGIHLEKGNKAKALH 359
             YT L+   C+ GKLEEA    + M     + GVD+    Y  L+   L+  ++   L 
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQDMG----LRGVDLDLVCYGVLIDGSLKHKDRKVFLG 668

Query: 360 LCEEMVSEGLKPS 372
           L +EM   GLKP 
Sbjct: 669 LLKEMHDRGLKPD 681



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 157/348 (45%), Gaps = 1/348 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRI 84
           F+ LI    +S R      +++ M+  +   P   T+  L+  L K       +++ D +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P V + T +I  + + + +     ++ +M       + + Y++++    K + +
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A+ + +++  +    +   Y T +   C+  + E    ++ EM      P +   + L
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +EG  K  ++EE+L+  +++    + P+   +N +I  LC+  N  +A  +       G 
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN++TYS LI  + + G++   L    EM    + P++  Y SLI+  C+ G +  A+ 
Sbjct: 399 CPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAES 458

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               M +  L P V  Y SL+G +  KG   KAL L  EM  +G+ PS
Sbjct: 459 LMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPS 506



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/386 (21%), Positives = 155/386 (40%), Gaps = 35/386 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ +L+       + +   R+Y  M      P+  T  TL+S L + G ++  V + 
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLF 530

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +      P  +    +I    +E  + +    L  M+ K ++ DT +Y  +++     
Sbjct: 531 TEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLT 590

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A V  + + K     N   YT  +  +C  GK+EEA  + Q+M   G+      +
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCY 650

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            +LI+G  K K  +  L   ++M  R L P    +  MI    + G+ K+A G+  L ++
Sbjct: 651 GVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------------- 295
           +G  PNE+TY+ +I G  K G + E   L  +M                           
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMK 770

Query: 296 ---------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
                     K +      Y  LI   C+ G++EEA +    M    + P    Y +++ 
Sbjct: 771 KAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMIS 830

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
               + +  KA+ L   M  +G++P 
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPD 856



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 156/359 (43%), Gaps = 1/359 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   S+  +N+LI+   K         +   M+     P   T  +L+   C  G++   
Sbjct: 432 GLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +   + GK   P +   T+L+  + +   I + + L   M   N+  + + Y++++  
Sbjct: 492 LRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG 551

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +  N+  A     EM+++G   +++ Y   I   C  G+  EA   +  +     +  
Sbjct: 552 YCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           +  +  L+ G  +  ++EE+LS C+ M  R +      +  +I    +  + K   G+L 
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLK 671

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+G  P+++ Y+ +I   +K G+ +E   ++  M  +   P    YT++I+ LC+ G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK-GNKAKALHLCEEMVSEGLKPSTSY 375
            + EA+     M+  + VP    Y   + I  +  G+  KA+ L   ++   L  + +Y
Sbjct: 732 FVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATY 790



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 118/268 (44%), Gaps = 2/268 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  VC+ +  RG  L L+ +  LI    K     +   + + M +    P++    +
Sbjct: 628 LEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTS 687

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I A  K G  +    + D +  + C P  +  T++I  + +   + E  +L  +M   N
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGN 747

Query: 124 MIHDTIAYSLIVYAKVK-MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            + + + Y   +    K + +++ A+ ++  +LK G  AN+  Y   I  +C  G++EEA
Sbjct: 748 SVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEA 806

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L+  M   G+ P   T+  +I    +   +++++     M  + + P   A+N +I  
Sbjct: 807 SELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEIT 270
            C  G   +A  +    L +G  PN  T
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 34/336 (10%)

Query: 69  CKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEE-----------GMVLL 116
           C+ G+ + +VD + RI  GKR S  + +++ L+ R ++   +EE           G+   
Sbjct: 33  CRIGEDKQFVDSVRRIVRGKR-SWEIALSSELVSRRLKTIHVEEILIGTIDDPKLGLRFF 91

Query: 117 KRM-LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY-- 173
             + L +   H T ++ ++++A V+  NL        + L       S V+      Y  
Sbjct: 92  NFLGLHRGFDHSTASFCILIHALVQA-NLFWPASSLLQTLLLRALKPSEVFDALFSCYEK 150

Query: 174 CEYGKIEEANCLMQE-----------------MENAGLKPYDETFNLLIEGCAKAKRIEE 216
           C+       + L+Q                  M    L P   T + L+ G  K +    
Sbjct: 151 CKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGL 210

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           ++   + M++  + P    +  +IR LCE  +  +A  M+      G   N + Y+ LI 
Sbjct: 211 AMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLID 270

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G  K+ ++ E + +  ++  K + P +  Y +L+  LC+  + E   +    M      P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSP 330

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 SLV    ++G   +AL+L + +   G+ P+
Sbjct: 331 SEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPN 366



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 35/243 (14%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +V   + + +  RG     + + ++I   +K+      + I+  M+     PNE T   +
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723

Query: 65  ISALCKGGQLQT----------------------YVDMLDRIHGKRCSPM---------V 93
           I+ LCK G +                        ++D+L +  G     +         +
Sbjct: 724 INGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGL 783

Query: 94  IVNTS----LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           + NT+    LI    ++ R+EE   L+ RM+   +  D I Y+ ++    +  +++ A+ 
Sbjct: 784 LANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIE 843

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++  M ++G   +   Y T I   C  G++ +A  L  EM   GLKP  ET    I   +
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISNDS 903

Query: 210 KAK 212
            +K
Sbjct: 904 SSK 906


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 187/381 (49%), Gaps = 5/381 (1%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y++Q    GF    I++NT ++ + ++       ++   M++    P+  T   ++
Sbjct: 273 DALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVV 332

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK GQL+    +L+++  + C P +    +LI+ +    R+EE + L +++  K + 
Sbjct: 333 NCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLS 392

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   +++++ A  K+ + + AL ++EEM   G + +   Y T I   C  GK+ +A  L
Sbjct: 393 PDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDL 452

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++EME+AG      T+N +I+G  K  RIEE+    +QM  + +  +   FN +I  LC+
Sbjct: 453 LKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 512

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 AN +++  + +G  PN ITY+ ++  Y K+G+I++   +   M        +  
Sbjct: 513 DKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVT 572

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI+ LC+ G+ + A K  + M+   +      Y  ++     + N   A++L  EM 
Sbjct: 573 YGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMT 632

Query: 366 SEGLKPS--TSYLCSASTCRG 384
             G  P   T  +     CRG
Sbjct: 633 EVGEPPDAFTYKIVFRGLCRG 653



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 173/372 (46%), Gaps = 3/372 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+L E  +     + +RG    +++FNTL+  + ++ +      + + M  +   P+E T
Sbjct: 166 MKLLETVYS---EMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETT 222

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL+    + G ++  + +  R+    CSP  +    LI    +  R+E+ +  +++ +
Sbjct: 223 FTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI 282

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 D I Y+  V    +  ++  AL V + M++ G   + F Y   +   C+ G++E
Sbjct: 283 ANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 342

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  ++ +M   G  P   TFN LI       R+EE+L    Q+  + L P    FN +I
Sbjct: 343 EAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILI 402

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G+ + A  +       G +P+E+TY+ LI      G++ + L L  EME     
Sbjct: 403 NALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCP 462

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            +   Y ++I  LC+  ++EEA++ F  M    +      + +L+    +      A  L
Sbjct: 463 RSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL 522

Query: 361 CEEMVSEGLKPS 372
             +M+SEGL+P+
Sbjct: 523 ISQMISEGLQPN 534



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 166/352 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G     + +N L++V+ +  +  L+  +Y  M E    P+  T  TL+ ALC+  Q++T 
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V ML+ +     +P     T+L+   ++E  I+  + +  RML        +  ++++  
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  +E AL   ++ +  GF  +   Y TF+   C+ G +  A  +M  M   G  P 
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N+++    K  ++EE+     QM+ R  LP  + FN +I  LC     ++A  +  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG SP+  T++ LI    K G+ Q  L+L+ EM+    +P    Y +LI +LC  G
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           KL +A    K M+S         Y +++    +K    +A  + ++M  +G+
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 496



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 162/353 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +    +F TL+    +        R+   MLE    P + T+  LI+  CK G+++  
Sbjct: 215 GVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDA 274

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +  + +       P  I   + +  + Q   +   + ++  M+++    D   Y+++V  
Sbjct: 275 LGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 334

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   LE A  +  +M++RG   +   + T I A C   ++EEA  L +++   GL P 
Sbjct: 335 LCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TFN+LI    K    + +L   E+M S    P    +N +I  LC  G   +A  +L 
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G   + +TY+ +I G  K+  I+E  +++ +M+ + IS     + +LI  LC+  
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           ++++A++    M S  L P    Y S++  + ++G+  KA  + + M + G +
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFE 567



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 5/324 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ R +  +G S  + +FN LI+ + K     L  R+++ M  +   P+E T  T
Sbjct: 376 LEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNT 435

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D+L  +    C    +   ++I  + ++ RIEE   +  +M  + 
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I ++ ++    K + ++ A  +  +M+  G   N+  Y + +  YC+ G I++A 
Sbjct: 496 ISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAA 555

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++Q M   G +    T+  LI G  KA R + +L     M  + +  +  A+N +I+ L
Sbjct: 556 DILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSL 615

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
               N + A  +     + G  P+  TY  +  G  +  G I+E      EM  K   P 
Sbjct: 616 FRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPE 675

Query: 303 LPAYTSLISSLCQCGKLEEADKYF 326
             ++  L   L   G     D YF
Sbjct: 676 FSSFRMLAEGLLNLG----MDDYF 695



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 143/304 (47%), Gaps = 7/304 (2%)

Query: 75  QTYVDMLDRIHGKRCSPM------VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           Q +VD +D +   +  P+       +V   L+  +++  +++    +   M  + +  D 
Sbjct: 127 QLFVDAVDLVL-NQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDV 185

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + ++ ++ A  +   + +A+++ EEM   G + +   +TT +  + E G I+ A  +   
Sbjct: 186 VTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKAR 245

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G  P   T N+LI G  K  R+E++L Y +Q ++    P    +N  +  LC+ G+
Sbjct: 246 MLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGH 305

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A  ++ + + +G  P+  TY+ ++    K G+++E   +  +M  +   P +  + +
Sbjct: 306 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNT 365

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI +LC   +LEEA    + +    L P V  +  L+    + G+   AL L EEM S G
Sbjct: 366 LIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425

Query: 369 LKPS 372
             P 
Sbjct: 426 CTPD 429


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 179/370 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A D+ + + + G    ++++NT++  + KS R +    ++  M      PN  +  
Sbjct: 95  MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHN 154

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+I  LC+  ++     +   +  +   P       LI  + +  ++ E   L +RML  
Sbjct: 155 TIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS 214

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +    + Y+++++       L+ AL +++ M  +G   + F +   I A+C+ GK++EA
Sbjct: 215 GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEA 274

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++ M + G  P   T++ LI G     R++++    E M+ R+  P+    N +I  
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G  K+A  +L   +  G SP+ +TY+ L+ G+ + G+ +   +L  +M  + ++P 
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT+L+S LC+  +L EA   F  MKS    P +  Y +L+      G     L L  
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFG 454

Query: 363 EMVSEGLKPS 372
           EMV  G+ P 
Sbjct: 455 EMVCAGISPD 464



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 178/381 (46%), Gaps = 7/381 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + L   G + S +++ +LIH +  ++  D    ++  M      P+  T   +I 
Sbjct: 29  ARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIID 88

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G L+   D++ ++      P V+   +++  + +  R+EE ++L   M R     
Sbjct: 89  ASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTP 148

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +  +++ I+    +   ++ A  V+ EM  R    +S+ Y   I    + GK+ EA  L 
Sbjct: 149 NRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLF 208

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M ++G+ P   T+N++I G   A  ++E+L   + M S+   PS   FN +I   C+ 
Sbjct: 209 RRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKR 268

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L    D G  P+ +TYS LI G      + +   L  +M  +   PT+   
Sbjct: 269 GKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 328

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LI  LC+ G+++EA +    M S    P V  Y +LV  H   G   +A  L  +MV+
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 388

Query: 367 EGLKPS-------TSYLCSAS 380
            GL P+        S LC A+
Sbjct: 389 RGLAPNVVTYTALVSGLCKAN 409



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 164/361 (45%), Gaps = 2/361 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E R       S+  LI  + K+ + +  +++++ ML++   P+  T   +I  +C    
Sbjct: 176 MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   +++   +  K C P       LI    +  +++E   LLKRM     + D + YS 
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +  ++ A  + E+M+KR          T I   C+ G+I+EA  ++  M ++G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N L+ G  +A + E +      M++R L P+   +  ++  LC+     +A 
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           G+       G +PN  TY+ LI G+   G++   LKL+ EM    ISP    Y +L + L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475

Query: 314 CQCGKLEEADKYFKIMKS--HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           C+ G+   A +  +  +    S   G ++Y   V   L+ G    AL    +MV  G  P
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLP 535

Query: 372 S 372
           +
Sbjct: 536 A 536



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 107/220 (48%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M +R  S +S+ Y   I    + GK+ +A  L Q++ ++G+ P    +  LI G   A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
            +++      M  R   PS   +N +I   C+ G  ++A  ++   ++ G  P+ +TY+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           ++ G  K G ++E L L+ EME    +P   ++ ++I  LCQ  K+++A + F  M++  
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + P    Y  L+    + G   +A  L   M+  G+ PS 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSA 220



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 137/337 (40%), Gaps = 51/337 (15%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + + +   G    +++++TLI  +    R D    + + M++    P   T  TLI 
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 333

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRKN 123
            LCK G+++   ++LD +     SP V+   +L+    R  Q ER  E   LL  M+ + 
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE---LLSDMVARG 390

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ +V    K   L  A  V+ +M   G + N F YT  I  +C  G+++   
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450

Query: 184 CLMQEMENAGLKP-------------------------------------YDETFNLLIE 206
            L  EM  AG+ P                                      DE +   ++
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G   A ++E +L +   M+    LP+      ++  LC+ G   +A  +L   +D     
Sbjct: 511 GLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD----- 565

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
             + Y     G A +  ++E++   YE+E   + P L
Sbjct: 566 --LAYGGKARGKAAK-FVEEMVGKGYEIEDGVLKPLL 599


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 170/355 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   + I++NTL+  + KS +    + + Q ML     P+  T   +I   CK GQL   
Sbjct: 336 GCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLA 395

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++   +  + C P +     +I    +  RI++   LL+RM       D + Y+ IV  
Sbjct: 396 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 455

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A  VYE +   G+  +    +T I   C+  ++++A  L++EME  G  P 
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              + +LI G  KA ++++SL++  +M+ +  +P+   ++ +I +LC+    +    +L 
Sbjct: 516 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLK 575

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L++G +P+ I Y+ +I G  K     E  +LY  M+    +PT+  Y  L+  LC+  
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVS 635

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+EA    ++M+S   +P    Y S+     +     KA  L + M S G  P+
Sbjct: 636 RLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPT 690



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 167/358 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QR  + S+I++  L+  + KS R      I + M+E    PN  T  TLI+  CK G + 
Sbjct: 229 QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V + +++    CSP V     LI    ++ER ++G  LL+ M++     + I Y+ ++
Sbjct: 289 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            + VK      A  + + ML+R    + F +   I  +C+ G+++ A  L Q M + G  
Sbjct: 349 DSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCL 408

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N++I G  +A RI+++    E+M      P    +N ++  LC+     +A  +
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             +  + G+  + +T S LI G  K   + +  KL  EME    +P + AYT LI   C+
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 528

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +L+++  +F  M     VP V  Y  ++    +         L + M+  G+ P  
Sbjct: 529 ADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDA 586



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 171/393 (43%), Gaps = 35/393 (8%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G + +++++NTLI+   K    D    ++  MLEN   P+  T   LI   CK  + Q
Sbjct: 264 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 323

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L  +    C P  I   +L+  +++  +  +   L + MLR++       ++L++
Sbjct: 324 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 383

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K+  L+ A  +++ M  RG   + + Y   I   C   +I++A  L++ M  AG  
Sbjct: 384 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 443

Query: 196 PYDETFNLLIEGCAKAKRIEES---------------LSYCEQMM-----SRKL------ 229
           P   T+N ++ G  KA +++E+               +  C  ++     SR+L      
Sbjct: 444 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 503

Query: 230 ---------LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                     P   A+  +I   C+     ++    +  LDKG  P  ITYS +I    K
Sbjct: 504 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
              +++   L   M  + ++P    YTS+I  LC+    +EA + +K+MK     P V  
Sbjct: 564 SARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVT 623

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           Y  LV    +     +A+HL E M S+G  P T
Sbjct: 624 YNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDT 656



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 154/338 (45%), Gaps = 3/338 (0%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FD C    Q G+  S  + N L+    +  +    + ++++    +  P+  T  TLI+ 
Sbjct: 119 FDWCT--GQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLING 176

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK    Q    +LD +  +   P   V  ++I  +    R++  +V  + M R N    
Sbjct: 177 FCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPS 235

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            I Y+++V A  K   +  A ++ E+M++ G + N   Y T I  +C+ G ++EA  L  
Sbjct: 236 VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 295

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M      P   T+N+LI+G  K +R ++     ++M+     P+   +N ++  L + G
Sbjct: 296 QMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               A  +  + L +   P+  T++ +I  + K G++    +L+  M  +   P +  Y 
Sbjct: 356 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN 415

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +IS  C+  ++++A +  + M      P V  Y S+V
Sbjct: 416 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 164/362 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++ + + +R    S  +FN +I +  K  + DL + ++Q M +    P+  T   +IS
Sbjct: 360 AFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 419

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+  ++     +L+R+    C P V+   S++  + +  +++E   + + +       
Sbjct: 420 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 479

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +  S ++    K R L+ A  +  EM + G + +   YT  I  +C+  +++++    
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 539

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G  P   T++++I+   K+ R+ +     + M+ R + P    +  +I  LC+ 
Sbjct: 540 SEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKS 599

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +  +A  +  L    G +P  +TY+ L+    K   + E + L   ME     P    Y
Sbjct: 600 DSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY 659

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            S+     +  + ++A + F+ MKS    P   +Y  L+   + +    +A+ + EE + 
Sbjct: 660 NSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALE 719

Query: 367 EG 368
            G
Sbjct: 720 AG 721



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/319 (21%), Positives = 154/319 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++A+++ + +  RG    + ++N +I    +++R D   ++ + M E    P+  T  +
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++S LCK  Q+    ++ + +        V+  ++LI  + +  R+++   LL+ M R  
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D +AY+++++   K   L+ +L  + EML +G       Y+  I   C+  ++ +  
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 571

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ M   G+ P    +  +I+G  K+   +E+    + M      P+   +N ++ +L
Sbjct: 572 MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A  +L +    G  P+ +TY+ +  G+ K  E  +  +L+  M+ +  SPT 
Sbjct: 632 CKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTP 691

Query: 304 PAYTSLISSLCQCGKLEEA 322
             Y+ L++ L    K+++A
Sbjct: 692 FMYSLLLTKLVAEEKMDQA 710



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 8/328 (2%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T   L+SA  +  + Q   D+        CSP  I  ++LI    +    ++   LL  M
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            ++ ++     Y+ I+        ++SALV Y +M +R  + +   YT  + A C+  +I
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARI 252

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            +A+ ++++M  AG  P   T+N LI G  K   ++E++    QM+     P    +N +
Sbjct: 253 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 312

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I   C+    +    +L   +  G  PN ITY+ L+    K G+  +   L   M  +  
Sbjct: 313 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 372

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P+   +  +I   C+ G+L+ A + F++M     +P +  Y  ++           A  
Sbjct: 373 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 432

Query: 360 LCEEMVSEGLKPS-------TSYLCSAS 380
           L E M   G  P         S LC AS
Sbjct: 433 LLERMTEAGCPPDVVTYNSIVSGLCKAS 460



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 105/224 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A  + R +E+ G +  ++++  LIH   K+D+ D     +  ML+    P   T 
Sbjct: 495 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 554

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I  LCK  +++    +L  +  +  +P  IV TS+I  + + +  +E   L K M +
Sbjct: 555 SIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                  + Y+++V    K+  L+ A+ + E M   G   ++  Y +    + +  + ++
Sbjct: 615 TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDK 674

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           A  L Q M++ G  P    ++LL+      +++++++   E+ +
Sbjct: 675 AFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEAL 718


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 175/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   ++++G   ++ ++  LI  + K ++ D   ++   M E    P+  T   LI 
Sbjct: 318 ALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G +    ++LD +    C P       LI  + ++ ++ + M LL +ML + +  
Sbjct: 378 GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSP 437

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             I Y+ +++ + K+ +LESA  +   M + G   + + Y+ FI   C+ G++EEA  L 
Sbjct: 438 SLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLF 497

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             ++  G+K  +  +  LI+G  K  +I+ + S  E+M++   LP+   +N +I  LC+ 
Sbjct: 498 DSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKE 557

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+A+ ++   L  G  P  +TY+ LIG   K+G     LK++  M      P +  Y
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+ + +    G LEE D     M    ++P +  Y  L+  +   G   +A    + MV 
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677

Query: 367 EGLKPS 372
            G KPS
Sbjct: 678 TGCKPS 683



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 155/332 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G   S++++N LI    K    D  + I   M  N   PN  T   LI  LCK  +
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +L+++  ++ SP +I   SLI    +   +E    LL  M    ++ D   YS+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +    K   +E A  +++ +  +G  AN  +YT  I  YC+ GKI+ A  L++ M N  
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N+LIEG  K K+++E+ S   +M++  + P+   +  +I  + + G    A 
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    +  G+ P+  TY+  +  Y  +G ++EV  +  +M  + I P L  YT LI   
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            + G    A  + K M      P + I   L+
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 163/367 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++V   + Q+G   + +S+  LIH + ++ R +   +++  M E+   P   T   LI 
Sbjct: 248 AYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIY 307

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL   G+    +++ + +  K C P V   T LI  + +E +++E   +L  M  K +I 
Sbjct: 308 ALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIP 367

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ ++    K   ++ A  + + M       N+  Y   I   C+  K+ +A  L+
Sbjct: 368 SVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALL 427

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M    L P   T+N LI G  K   +E +      M    L+P    ++  I  LC+ 
Sbjct: 428 NKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKE 487

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +      KG   NE+ Y+ LI GY K G+I     L   M   +  P    Y
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI  LC+  K++EA      M +  + P V  Y  L+G  L+ G    AL +   MVS
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 367 EGLKPST 373
            G +P  
Sbjct: 608 LGYQPDV 614



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 169/359 (47%), Gaps = 2/359 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q G      ++ +LI    ++   D  + ++  M +     NE +   LI  LC+ G++ 
Sbjct: 222 QAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +   +    C P V   T LI  +    R  E + L   M  K    +   Y++++
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   ++ A  +  EM ++G   +   Y   I  YC+ G I++A  ++  ME+    
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  K +++ ++++   +M+ RKL PS   +N +I   C+  + + A  +
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L+L  + G  P++ TYS  I    KEG ++E   L+  ++ K +      YT+LI   C+
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK++ A    + M + + +P    Y  L+ G+  EK  K +A  L  +M++ G+KP+ 
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK-EASSLVAKMLTMGVKPTV 579



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 171/391 (43%), Gaps = 41/391 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S SLI++N+LIH   K +  +  +R+   M EN   P++ T    I  LCK G+++
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491

Query: 76  ---TYVD--------------------------------MLDRIHGKRCSPMVIVNTSLI 100
              T  D                                +L+R+    C P       LI
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551

Query: 101 LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
             + +E++++E   L+ +ML   +    + Y++++   +K    + AL V+  M+  G+ 
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            +   YT F+ AY   G +EE + ++ +M   G+ P   T+ +LI+G A+      +  +
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            + M+     PS    + +I+ L      K+      + +D   + N +     I    K
Sbjct: 672 LKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS--EIGIDSVSNVNSVD----IADVWK 725

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
             E +  LKL+ +M     +  +  Y +LI+  CQ  +LEEA      MK   + P  DI
Sbjct: 726 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 785

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           Y SL+    + G  A+A+ L + MV  GL P
Sbjct: 786 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 816



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 151/368 (41%), Gaps = 38/368 (10%)

Query: 8   FDVCRYLEQRG---FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            +V R +   G   F  +L  +NT++  ++K    D +  +Y  +L N   PN  T   +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++  CK G                                    + E  +   ++++  +
Sbjct: 201 VNGYCKIGN-----------------------------------VVEAELYASKIVQAGL 225

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DT  Y+ ++    + + +++A  V+  M ++G   N   YT  I   CE G+I EA  
Sbjct: 226 HPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALK 285

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M      P   T+ +LI   + + R  E+L+   +M  +   P+   +  +I  LC
Sbjct: 286 LFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLC 345

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  ML+   +KG  P+ +TY+ LI GY KEG I +  ++   ME  S  P   
Sbjct: 346 KENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTR 405

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  LI  LC+  K+ +A      M    L P +  Y SL+    +  +   A  L   M
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465

Query: 365 VSEGLKPS 372
              GL P 
Sbjct: 466 NENGLVPD 473



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 131/299 (43%), Gaps = 10/299 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  V  ++   G+   + ++   +H        + V  +   M E    P+  T   
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    + G      D L  +    C P + + + LI  +  E R++E         R  
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET--------RSE 706

Query: 124 MIHDTIAY--SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +  D+++   S+ +    K    E AL ++E+M++ G + +  +Y   I  +C+  ++EE
Sbjct: 707 IGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEE 766

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+  M+  G+ P ++ +N L++ C K     E++   + M+   LLP   ++  ++ 
Sbjct: 767 AQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVC 826

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            L   G+ ++A  +    L  G++ +E+ +  LI G  K   + E  +L   ME K  +
Sbjct: 827 GLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDAT 885



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 86/180 (47%)

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            KP    +N ++   +K   I+E  +   ++++ ++ P+   FN M+   C+ GN  +A 
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
              +  +  G  P+  TY+ LI G+ +   +    +++  M  K       +YT+LI  L
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G++ EA K F  M   +  P V  Y  L+      G K +AL+L  EM  +G +P+ 
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 180/365 (49%), Gaps = 1/365 (0%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           D  R L  +  + +++ FNTLI+  V++   ++    +++ ML     P+  T  TLI  
Sbjct: 357 DEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK G L +  ++++ +  K C P VI  T LI R  +E R+EE   +L  M  K +  +
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + Y+ ++ A  K   ++ AL ++ +M  +G   + F + + I   C+  K EEA  L Q
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M   G+     T+N LI    +   ++E+L     M+ R        +N +I+ LC  G
Sbjct: 537 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 596

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
           N ++   +    + KG +PN I+ + LI G  + G IQ  L+   +M ++ ++P +  Y 
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 656

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           SLI+ LC+ G+ +EA   F  ++   + P    Y +L+  H ++G    A  L    V  
Sbjct: 657 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 716

Query: 368 GLKPS 372
           G  P+
Sbjct: 717 GFIPN 721



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 5/313 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   ++I++  LI    K  R +    +   M       N      LISALCK  +
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q  ++M   +  K C P +    SLI  + +  + EE + L + ML + +I +TI Y+ 
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++A ++   ++ AL +  +ML RG   +   Y   I A C  G IE+   L ++M + G
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P + + N+LI G  +   I+ +L +   M+ R L P    +N +I  LC+ G A++A 
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +G  P+ ITY+ LI  + KEG   +   L          P    +  L+S+ 
Sbjct: 673 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 732

Query: 314 CQCGKLEEADKYF 326
                ++E D+ F
Sbjct: 733 -----IKEGDQEF 740



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 170/351 (48%), Gaps = 7/351 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++ V+   +   +V  ++  ML     P   T   ++ ALC   ++ +   +L  +
Sbjct: 202 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 261

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C P  IV  +LI  + +  R+ E + LL+ ML    I D   ++  ++   KM  +
Sbjct: 262 TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 321

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  + + ML RGF+ NSF Y   +   C  GK++EA  L+ ++ N    P    FN L
Sbjct: 322 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTL 377

Query: 205 IEGCAKAKRIEESLSYC-EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           I G     R++E+ +   E M+S    P    +N +I  LC+ G    A  ++     KG
Sbjct: 378 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN ITY+ LI  + KEG ++E   +  EM  K ++     Y  LIS+LC+  K+++A 
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 497

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGLKPST 373
             F  M S    P +  + SL+   L K NK  +AL L ++M+ EG+  +T
Sbjct: 498 NMFGDMSSKGCKPDIFTFNSLI-FGLCKVNKFEEALGLYQDMLLEGVIANT 547



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 171/395 (43%), Gaps = 40/395 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDR-----------------------NDLV------WR 44
           + + G   + I + TLIH ++K  R                       ND +       R
Sbjct: 261 MTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLR 320

Query: 45  IYQ------HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           I++       ML     PN  T   L+  LC+ G++     +L+++     +P V++  +
Sbjct: 321 IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNT 376

Query: 99  LILRIIQEERIEEG-MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
           LI   +   R++E   V+ + ML      D   Y+ ++    K   L SA  +  EM  +
Sbjct: 377 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 436

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   N   YT  I  +C+ G++EEA  ++ EM   GL      +N LI    K ++++++
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           L+    M S+   P    FN +I  LC+    ++A G+    L +G   N ITY+ LI  
Sbjct: 497 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 556

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           + + G +QE LKL  +M ++        Y  LI +LC+ G +E+    F+ M S  L P 
Sbjct: 557 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 616

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 L+      GN   AL    +M+  GL P 
Sbjct: 617 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPD 651



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 163/353 (46%), Gaps = 5/353 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S ++ +F  ++  +   +  D    + + M  +   PN    +TLI AL K G++  
Sbjct: 229 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNE 288

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +L+ +    C P V      I  + +  RI E   L+ RML +    ++  Y ++++
Sbjct: 289 VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMH 348

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE-MENAGLK 195
              +M  ++ A      +L +  + N  ++ T I  Y   G+++EA  +M E M + G  
Sbjct: 349 GLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG 404

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  K   +  +     +M  +   P+   +  +I R C+ G  ++A  +
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     KG + N + Y+ LI    K+ ++Q+ L ++ +M  K   P +  + SLI  LC+
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             K EEA   ++ M    ++     Y +L+   L +G   +AL L  +M+  G
Sbjct: 525 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 96/207 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  + + +   G   + I++NTLIH   +        ++   ML      ++ T   
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI ALC+ G ++  + + + +  K  +P  I    LI  + +   I+  +  L+ M+ + 
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ ++    K    + AL +++++   G   ++  Y T I  +C+ G  ++A+
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 707

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAK 210
            L+    ++G  P + T+ +L+    K
Sbjct: 708 LLLSRGVDSGFIPNEVTWYILVSNFIK 734


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 180/365 (49%), Gaps = 1/365 (0%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           D  R L  +  + +++ FNTLI+  V++   ++    +++ ML     P+  T  TLI  
Sbjct: 339 DEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 398

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK G L +  ++++ +  K C P VI  T LI R  +E R+EE   +L  M  K +  +
Sbjct: 399 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 458

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + Y+ ++ A  K   ++ AL ++ +M  +G   + F + + I   C+  K EEA  L Q
Sbjct: 459 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 518

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M   G+     T+N LI    +   ++E+L     M+ R        +N +I+ LC  G
Sbjct: 519 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 578

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
           N ++   +    + KG +PN I+ + LI G  + G IQ  L+   +M ++ ++P +  Y 
Sbjct: 579 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 638

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           SLI+ LC+ G+ +EA   F  ++   + P    Y +L+  H ++G    A  L    V  
Sbjct: 639 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 698

Query: 368 GLKPS 372
           G  P+
Sbjct: 699 GFIPN 703



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 5/313 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   ++I++  LI    K  R +    +   M       N      LISALCK  +
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q  ++M   +  K C P +    SLI  + +  + EE + L + ML + +I +TI Y+ 
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++A ++   ++ AL +  +ML RG   +   Y   I A C  G IE+   L ++M + G
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P + + N+LI G  +   I+ +L +   M+ R L P    +N +I  LC+ G A++A 
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +G  P+ ITY+ LI  + KEG   +   L          P    +  L+S+ 
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714

Query: 314 CQCGKLEEADKYF 326
                ++E D+ F
Sbjct: 715 -----IKEGDQEF 722



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 170/351 (48%), Gaps = 7/351 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++ V+   +   +V  ++  ML     P   T   ++ ALC   ++ +   +L  +
Sbjct: 184 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 243

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C P  IV  +LI  + +  R+ E + LL+ ML    I D   ++  ++   KM  +
Sbjct: 244 TRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 303

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  + + ML RGF+ NSF Y   +   C  GK++EA  L+ ++ N    P    FN L
Sbjct: 304 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTL 359

Query: 205 IEGCAKAKRIEESLSYC-EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           I G     R++E+ +   E M+S    P    +N +I  LC+ G    A  ++     KG
Sbjct: 360 INGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN ITY+ LI  + KEG ++E   +  EM  K ++     Y  LIS+LC+  K+++A 
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 479

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGLKPST 373
             F  M S    P +  + SL+   L K NK  +AL L ++M+ EG+  +T
Sbjct: 480 NMFGDMSSKGCKPDIFTFNSLI-FGLCKVNKFEEALGLYQDMLLEGVIANT 529



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 170/395 (43%), Gaps = 40/395 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDR-----------------------NDLV------WR 44
           + + G   + I + TLIH + K  R                       ND +       R
Sbjct: 243 MTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLR 302

Query: 45  IYQ------HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           I++       ML     PN  T   L+  LC+ G++     +L+++     +P V++  +
Sbjct: 303 IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNT 358

Query: 99  LILRIIQEERIEEG-MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
           LI   +   R++E   V+ + ML      D   Y+ ++    K   L SA  +  EM  +
Sbjct: 359 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 418

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   N   YT  I  +C+ G++EEA  ++ EM   GL      +N LI    K ++++++
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 478

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           L+    M S+   P    FN +I  LC+    ++A G+    L +G   N ITY+ LI  
Sbjct: 479 LNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHA 538

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           + + G +QE LKL  +M ++        Y  LI +LC+ G +E+    F+ M S  L P 
Sbjct: 539 FLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 598

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 L+      GN   AL    +M+  GL P 
Sbjct: 599 NISCNILINGLCRTGNIQHALEFLRDMIHRGLTPD 633



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 163/353 (46%), Gaps = 5/353 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S ++ +F  ++  +   +  D    + + M  +   PN    +TLI AL K G++  
Sbjct: 211 KGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNE 270

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +L+ +    C P V      I  + +  RI E   L+ RML +    ++  Y ++++
Sbjct: 271 VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMH 330

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE-MENAGLK 195
              +M  ++ A      +L +  + N  ++ T I  Y   G+++EA  +M E M + G  
Sbjct: 331 GLCRMGKVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCG 386

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  K   +  +     +M  +   P+   +  +I R C+ G  ++A  +
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     KG + N + Y+ LI    K+ ++Q+ L ++ +M  K   P +  + SLI  LC+
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 506

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             K EEA   ++ M    ++     Y +L+   L +G   +AL L  +M+  G
Sbjct: 507 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 96/207 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  + + +   G   + I++NTLIH   +        ++   ML      ++ T   
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 569

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI ALC+ G ++  + + + +  K  +P  I    LI  + +   I+  +  L+ M+ + 
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ ++    K    + AL +++++   G   ++  Y T I  +C+ G  ++A+
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 689

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAK 210
            L+    ++G  P + T+ +L+    K
Sbjct: 690 LLLSRGVDSGFIPNEVTWYILVSNFIK 716


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 184/369 (49%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  AF V   + + G   + ++F+TL++ ++   +     +++  M++    P+  T  T
Sbjct: 28  FHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYST 87

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LCK G     + +L ++  K C P V+V +++I  + +++ I E M  L  M+ + 
Sbjct: 88  IINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRG 147

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + YS I++    +     A  ++++M++R    ++  +   +    + G I EA 
Sbjct: 148 ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQ 207

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           C+ + M   G++P   T+N L++G     +++E+      M+ +   PS  ++N +I+  
Sbjct: 208 CVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A G+L     K  +P+ +TYS L+ G+ ++G  Q+  KL  EM    + P L
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ ++  LC+ G L+EA +  K M+   + P + IY  L+      G    A  L   
Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387

Query: 364 MVSEGLKPS 372
           +  +G++P 
Sbjct: 388 LFVKGIQPD 396



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 172/356 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+   +I+++T+I+ + K     +  ++ + M E    PN     T+I +LCK   +   
Sbjct: 77  GYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEA 136

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           ++ L  +  +  SP V+  +S++       R  E   L K+M+ +N++ DT+ ++++V  
Sbjct: 137 MEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDG 196

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +  A  V+E M+++G   N   Y   +  YC   +++EA  L   M   G  P 
Sbjct: 197 LSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPS 256

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N+LI+G  K+ RI+E+     +M  + L P    ++ +++  C+ G  + A  +L 
Sbjct: 257 VRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLE 316

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  P+ +TYS ++ G  K+G + E  +L   M+   I P +  YT LI  +C  G
Sbjct: 317 EMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFG 376

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           KLE A + F  +    + P V  Y  ++   L+ G   +A  L  +M   G  P++
Sbjct: 377 KLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNS 432



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 127/259 (49%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           +L  M +  +  + + +S ++        +  A+ +++EM+K G+  +   Y+T I   C
Sbjct: 34  VLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLC 93

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + G    A  L+++ME  G KP    ++ +I+   K K I E++ +  +M++R + P+  
Sbjct: 94  KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV 153

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            ++ ++   C  G + +A  +    +++   P+ +T++ L+ G +KEG I E   ++  M
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             K + P +  Y +L+   C   +++EA K F IM      P V  Y  L+  H + G  
Sbjct: 214 IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRI 273

Query: 355 AKALHLCEEMVSEGLKPST 373
            +A  L  EM  + L P T
Sbjct: 274 DEAKGLLAEMSHKALTPDT 292



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 152/328 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           +L   A +    +  RG S +++++++++H      R++    +++ M+E    P+  T 
Sbjct: 131 KLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTF 190

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  L K G +     + + +  K   P V    +L+     + +++E   L   M+R
Sbjct: 191 NILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR 250

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K       +Y++++    K   ++ A  +  EM  +  + ++  Y+T +  +C+ G+ ++
Sbjct: 251 KGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQD 310

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++EM + GL P   T++++++G  K   ++E+    + M   K+ P+   +  +I+
Sbjct: 311 AQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQ 370

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +C  G  + A  + +    KG  P+ +TY+ +I G  K G   E  +L+ +M      P
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIM 329
               Y  +I    + G    A +  + M
Sbjct: 431 NSCTYNVIIQGFLRNGDTSNAGRLIEEM 458



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 116/259 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   ++ ++N L+       + D   +++  M+     P+  +   LI   CK G++ 
Sbjct: 215 EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRID 274

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L  +  K  +P  +  ++L+    Q+ R ++   LL+ M    ++ D + YS+++
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVL 334

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  +L+ A  + + M +     N F+YT  I   C +GK+E A  L   +   G++
Sbjct: 335 DGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQ 394

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ ++I G  K     E+      M     LP+   +N +I+     G+   A  +
Sbjct: 395 PDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRL 454

Query: 256 LTLALDKGFSPNEITYSHL 274
           +   + +GFS +  T+  L
Sbjct: 455 IEEMVGRGFSADSSTFQML 473



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 2/213 (0%)

Query: 164 FVYTTFIGAYCE--YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +  T  I  +C   +     A  ++  M   GL+P   TF+ L+ G +   +I +++   
Sbjct: 11  YTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLF 70

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M+     P    ++ +I  LC+ G+   A  +L    +KG  PN + YS +I    K+
Sbjct: 71  DEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKD 130

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             I E ++   EM  + ISP +  Y+S++   C  G+  EA   FK M   +++P    +
Sbjct: 131 KLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTF 190

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             LV    ++G   +A  + E M+ +G++P+ +
Sbjct: 191 NILVDGLSKEGMILEAQCVFETMIEKGVEPNVN 223



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 77/191 (40%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +  +   ++++TL+    +  R     ++ + M      P+  T   ++  LCK G 
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    ++L  +   +  P + + T LI  +    ++E    L   +  K +  D + Y++
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   +K      A  ++ +M   G   NS  Y   I  +   G    A  L++EM   G
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462

Query: 194 LKPYDETFNLL 204
                 TF +L
Sbjct: 463 FSADSSTFQML 473


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 184/381 (48%), Gaps = 5/381 (1%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y++Q    GF    I++NT ++ + ++D      ++   M++    P+  T   ++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK GQL+    +L+++  + C P +    +LI  +    R+EE + L +++  K + 
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   +++++ A  K+ +   AL ++EEM   G + +   Y T I   C  GK+ +A  L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++ME+ G      T+N +I+G  K  RIEE+    +QM  + +  +   FN +I  LC+
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A G++   + +G  PN ITY+ ++  Y K+G+I++   +   M        +  
Sbjct: 509 DKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI+ LC+ G+ + A K  + M+   + P    Y  ++     + N   AL L  EM 
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628

Query: 366 SEGLKPS--TSYLCSASTCRG 384
             G  P   T  +     CRG
Sbjct: 629 EVGEPPDALTYKIVFRGLCRG 649



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 37/409 (9%)

Query: 2   RLFEVAFDVCRYLEQR--GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           +LF+ A D+     Q   G     + +N L++V+ +  +  L+  +Y  M      P+  
Sbjct: 123 QLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVV 182

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  TL+ ALC+  Q++T V ML+ +  +  +P     T+L+   ++E  IE  + +  RM
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY--- 176
           L        +  ++++    K+  +E AL   ++ +  GF  +   Y TF+   C+    
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 177 --------------------------------GKIEEANCLMQEMENAGLKPYDETFNLL 204
                                           G++EEA  ++ +M + G  P   TFN L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I       R+EE+L    Q+  + + P    FN +I  LC+ G+   A  +     + G 
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+E+TY+ LI      G++ + L L  +ME      +   Y ++I  LC+  ++EEA++
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            F  M    +      + +L+    +      A  L  +M+SEGL+P+ 
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNN 531



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 168/369 (45%), Gaps = 1/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q G    + ++N +++ + K+ + +    I   M++    P+  T  TLI+
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC G +L+  +D+  ++  K  SP V     LI  + +       + L + M       
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  L  AL + ++M   G   ++  Y T I   C+  +IEEA  + 
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  G+     TFN LI+G  K K+I+++     QM+S  L P+   +N ++   C+ 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  +L      GF  + +TY  LI G  K G  Q  LK+   M  K + PT  AY
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMV 365
             ++ SL +   + +A   F+ M      P    Y+ +  G+    G   +A     EMV
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664

Query: 366 SEGLKPSTS 374
            +G  P  S
Sbjct: 665 DKGFIPEFS 673



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 6/343 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ R +  +G S  + +FN LI+ + K     L  R+++ M  +   P+E T  T
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D+L  +    C    I   ++I  + ++ RIEE   +  +M  + 
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I ++ ++    K + ++ A  +  +M+  G   N+  Y + +  YC+ G I++A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++ M   G +    T+  LI G  KA R + +L     M  + + P+  A+N +++ L
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
               N + A  +     + G  P+ +TY  +  G  +  G I+E      EM  K   P 
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             ++  L   L   G     D YF I     ++  VD+ ES V
Sbjct: 672 FSSFRMLAEGLLNLG----MDDYF-IRAIEIIMEKVDLRESDV 709



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 161/357 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG +    +F TL+    +    +   R+   MLE      + T+  LI+  CK G+
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +  + +       P  I   + +  + Q + +   + ++  M+++    D   Y++
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K   LE A  +  +M+ RG   +   + T I A C   ++EEA  L +++   G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   TFN+LI    K      +L   E+M +    P    +N +I  LC  G   +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L      G   + ITY+ +I G  K+  I+E  +++ +M+ + IS     + +LI  L
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C+  K+++A      M S  L P    Y S++  + ++G+  KA  + E M + G +
Sbjct: 507 CKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 2/229 (0%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G  A++ VY   +    E  K++    +  EM   G+KP   TFN L++   +A ++  +
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   E+M SR + P  + F  +++   E G+ + A  +    L+ G S  ++T + LI G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           Y K G +++ L    +       P    Y + ++ LCQ   +  A K   +M      P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS--ASTCRG 384
           V  Y  +V    + G   +A  +  +MV  G  P  +   +  A+ C G
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 175/359 (48%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q G S    ++ +LI    +++  +  ++++  M       NE +  T+I  LC+ G++ 
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +  ++    C P V   T +I  +   +R  EGM L   M  ++   +   Y+++V
Sbjct: 302 EGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMV 361

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A  K R L+ +  +  EM+++G   +   Y   I  YCE G+IE A  ++  ME+   +
Sbjct: 362 DAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCR 421

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P + T+N LI G +K K + ++++   +M+  KL PS   +N +I   C+ G+   A  +
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL 481

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L L  + G  P++ TYS  I    K   ++E   L+  ++ K I      YT+LI   C+
Sbjct: 482 LDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCK 541

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            GK++EA    + M S   +P    Y SL+    ++G   + L + E M   G+KP+ +
Sbjct: 542 AGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVA 600



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 170/366 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
             D+   + +R    ++ ++  ++  + K  + D   RI   M+E    P+  T   LI 
Sbjct: 338 GMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIR 397

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+++  +++L  +    C P       LI    + + + + M LL +ML   +  
Sbjct: 398 GYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTP 457

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ +++ + K  + +SA  + + + + G   + + Y+ FI   C+  ++EEA  L 
Sbjct: 458 SLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLF 517

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             ++  G+K  +  +  LI+G  KA +I+E++S  E+M S   LP+ S +N +I  +C+ 
Sbjct: 518 NSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKE 577

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++   M+      G  P   TY+ LI    +EG+     +++ +M      P +  Y
Sbjct: 578 GKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTY 637

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+ I + C  G ++EA+     M    ++P    Y  L+  +   G    A ++ + M+ 
Sbjct: 638 TAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLD 697

Query: 367 EGLKPS 372
            G  PS
Sbjct: 698 AGCDPS 703



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 161/349 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++  +IH +  +DRN     ++  M E    PN  T   ++ A+CK  +L     +L+ +
Sbjct: 321 TYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEM 380

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K   P V+   +LI    +E RIE  + +L  M   N   +   Y+ ++    K +++
Sbjct: 381 MEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHV 440

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A+ +  +ML+   + +   Y + I   C+ G  + A  L+  ++  GL P   T+++ 
Sbjct: 441 HKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVF 500

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   K+KR+EE+      +  + +  +   +  +I   C+ G   +A  +L     +  
Sbjct: 501 IDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDC 560

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  TY+ LI G  KEG++QE L +   M    + PT+  YT LI  + + G  + A++
Sbjct: 561 LPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANR 620

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            F  M S    P V  Y + +  +   GN  +A  +   M+  G+ P +
Sbjct: 621 VFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDS 669



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 162/352 (46%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F LS+ S+N L+ ++ +    D + R+Y  ML ++  PN  T+ T+++A  K G +    
Sbjct: 175 FKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEAN 234

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
             + +I     SP     TSLIL   +   +     +   M  K    + ++Y+ I++  
Sbjct: 235 LYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL 294

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            +   ++  + ++++M +         YT  I A     +  E   L  EM     +P  
Sbjct: 295 CEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNV 354

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+ ++++   K ++++ES     +MM + L+PS   +N +IR  CE G  + A  +L L
Sbjct: 355 HTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGL 414

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
                  PNE TY+ LI G++K   + + + L  +M    ++P+L  Y SLI   C+ G 
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            + A K   ++K + LVP    Y   +    +     +A  L   +  +G+K
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 145/330 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   S++++N LI    +  R +    I   M  N   PNE T   LI    K   + 
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVH 441

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +L ++   + +P ++   SLI    +    +    LL  +    ++ D   YS+ +
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFI 501

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K + +E A  ++  + ++G  AN  +YT  I  +C+ GKI+EA  L++ M +    
Sbjct: 502 DTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCL 561

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  K  +++E LS  E M    + P+ + +  +I  +   G+   AN +
Sbjct: 562 PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  P+  TY+  I  Y   G ++E   +   M    + P    YT LIS+  +
Sbjct: 622 FNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYER 681

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            G   +A    K M      P   I+ +L+
Sbjct: 682 LGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 114/237 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +   L++ G      +++  I  + KS R +    ++  + E     NE     
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK G++   + +L+R+H + C P      SLI  + +E +++EG+ +++ M +  
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +      Y++++   ++  + + A  V+ +M+  G   + + YT FI  YC  G ++EA 
Sbjct: 595 VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAE 654

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            +M  M  AG+ P   T+ LLI    +     ++ +  ++M+     PS   +N +I
Sbjct: 655 GMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 98/223 (43%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           VY EML      N +   T + AY + G I EAN  + ++  AGL P   T+  LI G  
Sbjct: 201 VYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYC 260

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +   +  +      M ++    +  ++  +I  LCE G   +   +     +    P   
Sbjct: 261 RNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVR 320

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ +I          E + L+ EM  +S  P +  YT ++ ++C+  KL+E+ +    M
Sbjct: 321 TYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEM 380

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               LVP V  Y +L+  + E+G    AL +   M S   +P+
Sbjct: 381 MEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPN 423



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 6/175 (3%)

Query: 204 LIEGCAKAKRIEESLSYCEQMMSR----KLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           +I+ C     I   L +  QM       K   S  ++NE++  L       +   + T  
Sbjct: 146 MIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEM 205

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLISSLCQCGK 318
           L+    PN  T + ++  Y+K G I E   LY    +++ +SP    YTSLI   C+   
Sbjct: 206 LNDMIVPNIYTLNTMVNAYSKMGNIVEA-NLYVSKIFQAGLSPDSFTYTSLILGYCRNND 264

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +  A K F +M +         Y +++    E G   + + L ++M  +   P+ 
Sbjct: 265 VNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTV 319


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 177/369 (47%), Gaps = 6/369 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G ++ + ++  ++  + K+ +      + + +  N   P  AT   L++ LCK G+L+  
Sbjct: 160 GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 219

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L +I    C+P V+  TSLI  + +E+R  E   L K M  + ++ DT+ Y+ ++  
Sbjct: 220 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRG 279

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            ++   +  A  VY+ M  +G   +    +T I   C+ G+I  A  + + ME  GL P 
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           +  ++ LI G  KA++++ +L    QM      P    +N +I  LC+ G+ + A     
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L+ G  P+  TY+ L+ G+ K G       ++ +M     SP +  Y +LIS LC+  
Sbjct: 400 EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS--- 374
           +L +A  YF+ MK     P   +Y SLV    + G       L +EM   G+  S +   
Sbjct: 460 QLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR 519

Query: 375 ---YLCSAS 380
              +LC A+
Sbjct: 520 LIFHLCKAN 528



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 157/345 (45%), Gaps = 2/345 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   E A D+ R +   G +  ++++ +LI  + K  R+   +++++ M       +   
Sbjct: 213 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVC 272

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  L + G++     +   +  + C P V+  +++I  + +  RI   + + K M 
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + YS +++   K R ++ AL +  +M K   + ++  Y   I   C+ G +E
Sbjct: 333 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 392

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A     EM  AG KP   T+N+L+ G  KA   + +    + M S    P+   +  +I
Sbjct: 393 AARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLI 452

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+     +A+       ++G  P+   YS L+ G  K G+++    L+ EME   ++
Sbjct: 453 SGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 512

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +    T LI  LC+  +++EA   F  ++   + P    Y S++
Sbjct: 513 NS-QTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 555



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 152/318 (47%), Gaps = 3/318 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R FE A+ + + +  RG  L  + +  LI  + ++ +      +Y+ M      P+  T+
Sbjct: 250 RSFE-AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I  LCK G++   V +   +  +  +P  +V ++LI  + +  +++  + +L +M +
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                DTI Y++++    K  ++E+A   ++EML+ G   + + Y   +  +C+ G  + 
Sbjct: 369 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA 428

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  +M ++   P   T+  LI G  K +++ ++  Y + M  R   P    ++ ++ 
Sbjct: 429 ACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVD 488

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G   +   ML   +++    N  T + LI    K   + E + L+  +  + + P
Sbjct: 489 GLCKSGKL-EGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-P 546

Query: 302 TLPAYTSLISSLCQCGKL 319
              AY S+IS+L +  K+
Sbjct: 547 HPYAYNSIISTLIKSAKV 564



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 143/317 (45%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   ++  LCK G++   +D  +      C+  +   T+++  + + ++I++ + L
Sbjct: 128 PSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVAL 187

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           ++++           Y+ ++    KM  LE A+ +  +++  G + +   YT+ I    +
Sbjct: 188 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 247

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             +  EA  L +EM   GL      +  LI G  +A +I ++ S  + M S+  +P    
Sbjct: 248 EKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 307

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
            + MI  LC+ G    A  +      +G +PNE+ YS LI G  K  ++   L++  +M+
Sbjct: 308 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 367

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
               +P    Y  LI  LC+ G +E A  +F  M      P V  Y  LV    + GN  
Sbjct: 368 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTD 427

Query: 356 KALHLCEEMVSEGLKPS 372
            A  + ++M S    P+
Sbjct: 428 AACGVFDDMSSSHCSPN 444



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 3/245 (1%)

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-N 191
           L V+A+ K R+ E+  ++  E L   F  +   +   I  YC   + EEA  +++EME +
Sbjct: 66  LDVFARTK-RHREAGNLLKNE-LATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEED 123

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P  +T NL++ G  K+ ++  ++ + E   +         +  ++  L +    + 
Sbjct: 124 YGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQD 183

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ++      G +P   TY+ L+ G  K G ++E + L  ++     +P +  YTSLI 
Sbjct: 184 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 243

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            L +  +  EA K FK M    LV     Y +L+   L+ G   +A  + + M S+G  P
Sbjct: 244 GLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 303

Query: 372 STSYL 376
               L
Sbjct: 304 DVVTL 308



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNE 238
           E  N L  E+    L P  ET+N+LI G   A+  EE+ +   +M     + PS    N 
Sbjct: 77  EAGNLLKNELATTFL-PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNL 135

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++  LC+ G    A          G + +  TY+ ++   AK  +IQ+ + L  ++    
Sbjct: 136 VLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANG 195

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKA 357
            +PT+  Y +L++ LC+ G+LEEA    + +  +   P V  Y SL+ G+  EK    +A
Sbjct: 196 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK-RSFEA 254

Query: 358 LHLCEEMVSEGLKPSTSYLCSASTCRG 384
             L +EM   GL   T  +C  +  RG
Sbjct: 255 YKLFKEMALRGLVLDT--VCYTALIRG 279


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 174/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A +    + +   S   +++NT++  + K  R      +   M      PN  T   
Sbjct: 224 FKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNI 283

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G L+   ++++ +      P V     LI  +  E RIEE   L   M    
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK 343

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D ++Y+ ++   ++   +  A  + EEM ++G   N+  +   +  YC+ GK+++A+
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             + +ME +G  P   T+N LI G  KA  + E+    ++M  + +       N ++R L
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     ++A  +L+ A  +G+  +E++Y  LI GY K+G +   LKL+ EM+ K I P+ 
Sbjct: 464 CREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPST 523

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +I  LCQCGK E+A      +    L+P    Y +++  +  +G+  KA     +
Sbjct: 524 VTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK 583

Query: 364 MVSEGLKPS 372
           MV    KP 
Sbjct: 584 MVENSFKPD 592



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 4/375 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR---YPNEATIRT 63
           AF + + +++     +L++ NTL++ + +   +  V    +   + I+    PN  T   
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C   + +  V+ L+ +    CSP  +   +++  + ++ R+ +   LL  M  + 
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG 273

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   Y+++VY   KM  L+ A  V E M +     + + Y   I   C  G+IEEA 
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EMEN  L P   ++N LI GC +  +I E+    E+M  + + P+    N M++  
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G    A+  +T   + GFSP+ +TY+ LI GY K G + E  +   EM  K++    
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDS 453

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               +++ +LC+  KLEEA K     +          Y +L+  + + GN  +AL L +E
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513

Query: 364 MVSEGLKPST-SYLC 377
           M  + + PST +Y C
Sbjct: 514 MKEKEIIPSTVTYNC 528



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 161/331 (48%), Gaps = 2/331 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + ++G   + ++ N ++    K  + D        M E+   P+  T  TLI+
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII-QEERIEEGMVLLKRMLRKNMI 125
             CK G +      +D + G++   M  V  + ILR + +E+++EE   LL    ++   
Sbjct: 427 GYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D ++Y  ++    K  N++ AL +++EM ++    ++  Y   IG  C+ GK E+A   
Sbjct: 486 IDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + E+  +GL P + T+N ++ G  +   +E++  +  +M+     P     N ++R LC 
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  ++A  +    + KG + + +TY+ LI    KEG + +   L  EME K + P    
Sbjct: 606 EGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           Y ++I++L   G++ EA+++   M     +P
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKMLEKGNLP 696



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 174/401 (43%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   ++ RG   +  ++N L++   K         + + M +N   P+  T   LI+
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G+++    + D +   +  P V+   +LI   ++  +I E   LL+ M  K +  
Sbjct: 322 GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + ++++V    K   ++ A     +M + GFS +   Y T I  YC+ G + EA   M
Sbjct: 382 NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES----------------------------- 217
            EM    +K    T N ++    + K++EE+                             
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501

Query: 218 ------LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                 L   ++M  ++++PS   +N +I  LC+CG  +QA   L   L+ G  P+E TY
Sbjct: 502 GNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTY 561

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + ++ GY +EG++++  + + +M   S  P +     L+  LC  G LE+A K F    S
Sbjct: 562 NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVS 621

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                    Y +L+    ++G    A +L  EM  + L P 
Sbjct: 622 KGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 168/368 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF +   +E       ++S+NTLI+   +  +    +++ + M E    PN  T   +
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIM 389

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +   CK G++    + + ++     SP  +   +LI    +   + E    +  M RKNM
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D++  + I+    + + LE A  +     KRG+  +   Y T I  Y + G ++ A  
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM+   + P   T+N +I G  +  + E+++S   +++   LLP  + +N ++   C
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+ ++A       ++  F P+  T + L+ G   EG +++ LKL+     K  +    
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV 629

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI+SLC+ G+L++A      M+   L P    Y +++    + G   +A     +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 365 VSEGLKPS 372
           + +G  P 
Sbjct: 690 LEKGNLPD 697



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 128/300 (42%), Gaps = 23/300 (7%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A+ +     +RG+ +  +S+ TLI    K    D   +++  M E    P+  T   
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC+ G+ +  +  L+ +      P      +++    +E  +E+      +M+  +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D    ++++        LE AL ++   + +G + ++  Y T I + C+ G++++A 
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS----------- 232
            L+ EME   L P   T+N +I     + RI E+  +  +M+ +  LP            
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETV 708

Query: 233 ------------CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                         A++E I+ LC  G  K A  +   +  KG + ++ TY +L+ G  K
Sbjct: 709 VTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 38/251 (15%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEME----------------------------- 190
           S +  +  T IGAY + G+   A  + ++M+                             
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 191 ---------NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
                      G+ P   TFN++I G     + ++++ +   M      P    +N ++ 
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G    A  +L     +G  PN  TY+ L+ GY K G ++E   +   M   ++ P
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y  LI+ LC  G++EEA K    M++  L+P V  Y +L+   LE    ++A  L 
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 362 EEMVSEGLKPS 372
           EEM  +G+KP+
Sbjct: 372 EEMSEKGVKPN 382



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/332 (18%), Positives = 140/332 (42%), Gaps = 23/332 (6%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     + ++   +  ++ NT++  + +  + +  +++     +   + +E +  TLI 
Sbjct: 437 AFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIV 496

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G +   + + D +  K   P  +    +I  + Q  + E+ +  L  +L   ++ 
Sbjct: 497 GYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ I++   +  ++E A   + +M++  F  + F     +   C  G +E+A  L 
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLF 616

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
               + G      T+N LI    K  R++++ +   +M  ++L P    +N +I  L + 
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDS 676

Query: 247 GNAKQANGMLTLALDKGFSPNE-----------------------ITYSHLIGGYAKEGE 283
           G  ++A   ++  L+KG  P++                       + YS  I     EG+
Sbjct: 677 GRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGK 736

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            ++ ++++ E + K I+     Y +L+  L +
Sbjct: 737 YKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/209 (19%), Positives = 82/209 (39%), Gaps = 12/209 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF     + +  F   + + N L+  +      +   +++   +   +  +  T  TL
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTL 634

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I++LCK G+L    ++L  +  K   P      ++I  +    RI E    + +ML K  
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGN 694

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D +              L+    V          ++S  Y+ +I   C  GK ++A  
Sbjct: 695 LPDQVL------------QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMR 742

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           +  E +  G+     T+  L++G  K ++
Sbjct: 743 IFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 181/369 (49%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++V   + + +E  G S ++ + +  ++   +  R DL + +   +++    P   T  T
Sbjct: 109 YDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTT 168

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LCK G+    V++ D +  K C P V    ++I  + +         LLK+M    
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG 228

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + YS ++ +  + R +  AL ++  M  +G S + F YT+ I   C++ + +EA+
Sbjct: 229 CQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEAS 288

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM +  + P   TFN+L++   K  ++ E+L   + M    + P+   ++ ++   
Sbjct: 289 ALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGY 348

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
               +  +A  +  + + KG  PN  +Y+ LI GY K   I E ++L+ EM ++ ++P  
Sbjct: 349 SLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNN 408

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +Y +LI   CQ GKL EA   F+ M ++  +P +  Y  L+    ++G   KA  L   
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468

Query: 364 MVSEGLKPS 372
           M S  LKP+
Sbjct: 469 MQSTYLKPN 477



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 178/369 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A ++   +  +G    + ++NT+I+ + K         + + M E    PN  T  T
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +LC+   +   +D+   +  K  SP +   TSLI  + +  R +E   LL  M   N
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D + ++++V    K   +  AL V + M + G   N   Y++ +  Y  +  + EA 
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEAR 358

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M   G KP   ++N+LI G  KAKRI+E++    +M+ + L P+  ++N +I   
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGF 418

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  +       G  P+  TYS L+ G+ K+G + +  +L+  M+   + P L
Sbjct: 419 CQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 478

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT L+ ++C+ G  ++A K F  +    L P V +Y +++    ++G   +AL     
Sbjct: 479 VMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRN 538

Query: 364 MVSEGLKPS 372
           M ++G  P 
Sbjct: 539 MEADGCPPD 547


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 174/360 (48%), Gaps = 3/360 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L++R  S  +ISFN L+  + ++ + +     ++ M +    PN  T   LI  LCK  +
Sbjct: 72  LDRR--SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVLIDGLCKANR 128

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   V++L+ +  + CSP VI  T L+  + +E ++     +L+ ML    + + + Y+ 
Sbjct: 129 VSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNS 188

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   + R +  AL +  +M  RG + N   Y T I   C+ G++++A  ++ +M + G
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 248

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    +N+LI G  KA +++ES++   + +S  + P    ++ +I  LC      +A 
Sbjct: 249 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 308

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L     +G  P+ I YS LI G  K G++ E   LY  M        +  Y++LI  L
Sbjct: 309 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGL 368

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G+++EA      M      P    Y SL+    +  +  +A+ L EEM      PS 
Sbjct: 369 CKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSA 428



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 174/354 (49%), Gaps = 2/354 (0%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S S++++NTL+  + ++ + +    ++Q ML+  R  +  +   L++ LC+ G+++T ++
Sbjct: 42  SPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALE 100

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
              R    RCSP VI  + LI  + +  R+ + + LL+ M  +    D I Y+++V    
Sbjct: 101 FF-RKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLC 159

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   + +A  V  EML  G   N   Y + +   C   ++ +A  LM++M   G  P   
Sbjct: 160 KESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVV 219

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+  LI+G  K  R++++ +    M+ +   P    +N +I  LC+     ++  +L  A
Sbjct: 220 TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 279

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           +  G  P+ +TYS +I G  +   + E  +L   ++ +   P +  Y++LI  LC+ GK+
Sbjct: 280 VSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 339

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +EA   +++M        V  Y +L+    + G   +A  L   MV  G  PST
Sbjct: 340 DEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPST 393



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 172/355 (48%), Gaps = 2/355 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   G   +++++N+LI  + K++  D    +++HM      P+  T  TL+  L + G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  + +   +  +R   ++  N  L+  + +  +IE  +   ++M       + I YS+
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNI-LVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSV 118

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +  A+ + E M  RG S +   YT  +   C+  K+  A  +++EM +AG
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N L+ G  +A+R+ ++L+    M  R   P+   +  +I  LC+ G  K A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ML   +DKG +P+ + Y+ LI G  K  ++ E + L        I P +  Y+S+I  L
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           C+  +L+EA +    +KS    P V +Y +L+    + G   +A  L E M  +G
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 1/293 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R    A  + R +  RG + +++++ TLI  + K  R      +   M++    P+    
Sbjct: 197 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 256

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI+ LCK  Q+   + +L R       P V+  +S+I  + +  R++E   LL  +  
Sbjct: 257 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 316

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +    D I YS ++    K   ++ A  +YE M   G  A+   Y+T I   C+ G+++E
Sbjct: 317 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDE 376

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A+ L+  M   G  P   T+N LI+G      ++E++   E+M      PS   +N +I 
Sbjct: 377 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 436

Query: 242 RLCECGNAKQAN-GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
            +C       A        +D G  P+ ITYS L+ G  K  ++ E+  L  +
Sbjct: 437 GMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 489


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 174/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A +    + +   S   +++NT++  + K  R      +   M      PN  T   
Sbjct: 224 FKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNI 283

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G L+   ++++ +      P V     LI  +  E RIEE   L   M    
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK 343

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D ++Y+ ++   ++   +  A  + EEM ++G   N+  +   +  YC+ GK+++A+
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             + +ME +G  P   T+N LI G  KA  + E+    ++M  + +       N ++R L
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     ++A  +L+ A  +G+  +E++Y  LI GY K+G +   LKL+ EM+ K I P+ 
Sbjct: 464 CREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPST 523

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +I  LCQCGK E+A      +    L+P    Y +++  +  +G+  KA     +
Sbjct: 524 VTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNK 583

Query: 364 MVSEGLKPS 372
           MV    KP 
Sbjct: 584 MVENSFKPD 592



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 181/375 (48%), Gaps = 4/375 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR---YPNEATIRT 63
           AF + + +++     +L++ NTL++ + +   +  V    +   + I+    PN  T   
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C   + +  V+ L+ +    CSP  +   +++  + ++ R+ +   LL  M  + 
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG 273

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   Y+++VY   KM  L+ A  V E M +     + + Y   I   C  G+IEEA 
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EMEN  L P   ++N LI GC +  +I E+    E+M  + + P+    N M++  
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G    A+  +T   + GFSP+ +TY+ LI GY K G + E  +   EM  K++    
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDS 453

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               +++ +LC+  KLEEA K     +          Y +L+  + + GN  +AL L +E
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513

Query: 364 MVSEGLKPST-SYLC 377
           M  + + PST +Y C
Sbjct: 514 MKEKEIIPSTVTYNC 528



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 161/331 (48%), Gaps = 2/331 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + ++G   + ++ N ++    K  + D        M E+   P+  T  TLI+
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII-QEERIEEGMVLLKRMLRKNMI 125
             CK G +      +D + G++   M  V  + ILR + +E+++EE   LL    ++   
Sbjct: 427 GYCKAGNMGEAFRTMDEM-GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D ++Y  ++    K  N++ AL +++EM ++    ++  Y   IG  C+ GK E+A   
Sbjct: 486 IDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + E+  +GL P + T+N ++ G  +   +E++  +  +M+     P     N ++R LC 
Sbjct: 546 LNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCM 605

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  ++A  +    + KG + + +TY+ LI    KEG + +   L  EME K + P    
Sbjct: 606 EGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYT 665

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           Y ++I++L   G++ EA+++   M     +P
Sbjct: 666 YNAIITALTDSGRIREAEEFMSKMLEKGXLP 696



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 174/401 (43%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   ++ RG   +  ++N L++   K         + + M +N   P+  T   LI+
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G+++    + D +   +  P V+   +LI   ++  +I E   LL+ M  K +  
Sbjct: 322 GLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + ++++V    K   ++ A     +M + GFS +   Y T I  YC+ G + EA   M
Sbjct: 382 NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES----------------------------- 217
            EM    +K    T N ++    + K++EE+                             
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKD 501

Query: 218 ------LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                 L   ++M  ++++PS   +N +I  LC+CG  +QA   L   L+ G  P+E TY
Sbjct: 502 GNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTY 561

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + ++ GY +EG++++  + + +M   S  P +     L+  LC  G LE+A K F    S
Sbjct: 562 NTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVS 621

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                    Y +L+    ++G    A +L  EM  + L P 
Sbjct: 622 KGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPD 662



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 168/367 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF +   +E       ++S+NTLI+   +  +    +++ + M E    PN  T   +
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIM 389

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +   CK G++    + + ++     SP  +   +LI    +   + E    +  M RKNM
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D++  + I+    + + LE A  +     KRG+  +   Y T I  Y + G ++ A  
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM+   + P   T+N +I G  +  + E+++S   +++   LLP  + +N ++   C
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+ ++A       ++  F P+  T + L+ G   EG +++ LKL+     K  +    
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI+SLC+ G+L++A      M+   L P    Y +++    + G   +A     +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 365 VSEGLKP 371
           + +G  P
Sbjct: 690 LEKGXLP 696



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 128/300 (42%), Gaps = 23/300 (7%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A+ +     +RG+ +  +S+ TLI    K    D   +++  M E    P+  T   
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC+ G+ +  +  L+ +      P      +++    +E  +E+      +M+  +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D    ++++        LE AL ++   + +G + ++  Y T I + C+ G++++A 
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS----------- 232
            L+ EME   L P   T+N +I     + RI E+  +  +M+ +  LP            
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETV 708

Query: 233 ------------CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                         A++E I+ LC  G  K A  +   +  KG + ++ TY +L+ G  K
Sbjct: 709 VTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 38/251 (15%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEME----------------------------- 190
           S +  +  T IGAY + G+   A  + ++M+                             
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 191 ---------NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
                      G+ P   TFN++I G     + ++++ +   M      P    +N ++ 
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G    A  +L     +G  PN  TY+ L+ GY K G ++E   +   M   ++ P
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y  LI+ LC  G++EEA K    M++  L+P V  Y +L+   LE    ++A  L 
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 362 EEMVSEGLKPS 372
           EEM  +G+KP+
Sbjct: 372 EEMSEKGVKPN 382



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/332 (18%), Positives = 139/332 (41%), Gaps = 23/332 (6%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     + ++   +  ++ NT++  + +  + +  +++     +   + +E +  TLI 
Sbjct: 437 AFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIV 496

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G +   + + D +  K   P  +    +I  + Q  + E+ +  L  +L   ++ 
Sbjct: 497 GYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ I++   +  ++E A   + +M++  F  + F     +   C  G +E+A  L 
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLF 616

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
               + G      T+N LI    K  R++++ +   +M  ++L P    +N +I  L + 
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDS 676

Query: 247 GNAKQANGMLTLALDKGFSPNEI-----------------------TYSHLIGGYAKEGE 283
           G  ++A   ++  L+KG  P ++                        YS  I     EG+
Sbjct: 677 GRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGK 736

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            ++ ++++ E + K I+     Y +L+  L +
Sbjct: 737 YKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 177/352 (50%), Gaps = 1/352 (0%)

Query: 22  SLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           +++ FNTL++   ++ R N+    +Y  M+ N   P+  T  TL++ LCK G   + +++
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           ++ +  K C P +   T LI    ++ ++EE  ++L+ ML K    +T+ Y+ ++ A  K
Sbjct: 405 VNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCK 464

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              +  AL ++ EM  +G   + F + + I   C   ++E+A  L ++M   G+     T
Sbjct: 465 HGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVT 524

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           FN LI    +   I+E+L     M+ R        +N +I+ LC+ G  ++  G+    +
Sbjct: 525 FNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI 584

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG +P+ IT + LI G+   G++   L+   +M ++  SP +  Y SLI+ LC+ G+++
Sbjct: 585 RKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQ 644

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA   F+ +++  + P    Y +L+     +G    A  L    V  G  P+
Sbjct: 645 EALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPN 696



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 168/350 (48%), Gaps = 7/350 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S  S+N ++ V+   +   +   ++  ML     PN+ T   ++ ALC   ++     +L
Sbjct: 174 SFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +    C P  ++  +LI  + + +R++E + LL+ M       D   ++ ++Y   ++
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRL 293

Query: 142 -RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            R LE A +V + M+ +GF+ N   Y   +   C+  +I+EA  L+ ++      P    
Sbjct: 294 NRVLEGAKLV-DRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVH 348

Query: 201 FNLLIEGCAKAKRIEESLSYC-EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           FN L+ G  +  R+ E+ ++  ++M++   +P    F+ ++  LC+ G    A  ++   
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             KG  PN  TY+ LI G+ K+G+++E   +  EM  K  S     Y +LIS+LC+ GK+
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            EA   F  M S    P +  + SL+           AL L  +MV EG+
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGV 518



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 144/308 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LF  A ++   ++ +G   +L ++  LI    K  + +    I + ML      N     
Sbjct: 397 LFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYN 456

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LISALCK G++   +DM   +  K C P +    SLI  + + + +E+ + L + M+ +
Sbjct: 457 ALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE 516

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +I +++ ++ +++A ++   ++ AL +  +ML RG   +   Y   I A C+ G +E+ 
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKG 576

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM   GL P   T N+LI G   A ++  +L +   M+ R   P    +N +I  
Sbjct: 577 LGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLING 636

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G  ++A  +      +G  P+ ITY+ LI    +EG   +   L Y        P 
Sbjct: 637 LCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPN 696

Query: 303 LPAYTSLI 310
              +  L+
Sbjct: 697 DVTWNILV 704



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 5/364 (1%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA +V   +  +G S +  +F  ++  +   +  D    + + M ++   PN    +TLI
Sbjct: 193 VASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLI 252

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            AL K  ++   + +L+ +    C P V    ++I    +  R+ EG  L+ RM+ K   
Sbjct: 253 DALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFT 312

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + + Y  +++   K   ++ A    + +L +    N   + T +  +   G++ EA   
Sbjct: 313 PNDMTYGYLMHGLCKTCRIDEA----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAF 368

Query: 186 M-QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  +M N G  P   TF+ L+ G  K      +L     M ++   P+ + +  +I   C
Sbjct: 369 VYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFC 428

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +L   L KGFS N + Y+ LI    K G+I E L ++ EM  K   P + 
Sbjct: 429 KKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIF 488

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + SLI  LC+  ++E+A   ++ M    ++     + +L+   L +G   +AL L  +M
Sbjct: 489 TFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDM 548

Query: 365 VSEG 368
           +  G
Sbjct: 549 LFRG 552



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 32/286 (11%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           ML K +  +   + L++ A   +  +++A ++  +M K G   NS +Y T I A  +  +
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++EA  L++EM   G  P   TFN +I G  +  R+ E     ++M+ +   P+   +  
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320

Query: 239 MIRRLCECGNAKQA------------------------NGMLTLA--------LDKGFSP 266
           ++  LC+     +A                        NG L  A        ++ G+ P
Sbjct: 321 LMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +  T+S L+ G  K+G     L+L  +M+ K   P L  YT LI   C+ G+LEEA    
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + M +         Y +L+    + G   +AL +  EM S+G KP 
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPD 486



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 5/224 (2%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V+ +ML +G S N + +   + A C   +++ A  L+++M   G  P    +  LI+  +
Sbjct: 197 VFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALS 256

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  R++E+L   E+M      P  + FN +I   C      +   ++   + KGF+PN++
Sbjct: 257 KRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDM 316

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY-FKI 328
           TY +L+ G  K   I E   L  ++      P +  + +L++   + G+L EA  + +  
Sbjct: 317 TYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDK 372

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M ++  VP V  + +LV    +KG    AL L  +M ++G KP+
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPN 416



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 1/219 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + R +   G   + ++FNTLIH   +        ++   ML      +E T   L
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGL 563

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I ALCK G ++  + + + +  K  +P +I    LI       ++   +  ++ M+ +  
Sbjct: 564 IKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGF 623

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ ++    K   ++ AL ++E++   G   +S  Y T I   C  G  ++A  
Sbjct: 624 SPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACF 683

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIE-ESLSYCE 222
           L+      G  P D T+N+L+    K    E ++++Y +
Sbjct: 684 LLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYAQ 722



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 42/86 (48%)

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            ++Y+M  K +SP    +  ++ +LC   +++ A    + M  H  VP   IY++L+   
Sbjct: 196 NVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDAL 255

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTS 374
            ++    +AL L EEM   G  P  +
Sbjct: 256 SKRDRVDEALKLLEEMFLMGCPPDVN 281



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 5/158 (3%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           PS  ++N ++  L        A+ +    L KG SPN+ T+  ++       E+     L
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLL 232

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
             +M      P    Y +LI +L +  +++EA K  + M      P V+ + +++     
Sbjct: 233 LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCR 292

Query: 351 KGNKAKALHLCEEMVSEGLKPST---SYLCSA--STCR 383
                +   L + M+ +G  P+     YL      TCR
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCR 330


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 179/363 (49%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R    AF     + + G+  + ++FNTL++ +    R      +   M+ +   P+  T+
Sbjct: 139 RKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITL 198

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+++ LC   ++   VD++ R+    C P       ++ R+ +       + LL++M  
Sbjct: 199 NTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEH 258

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +    + Y++I+    K   L+ AL  + EM  +G  AN F Y + IG++C +G+ ++
Sbjct: 259 RKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDD 318

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              L+++M    + P   TF+ LI+   K  ++ E+     +M++R + P+   +N +I 
Sbjct: 319 GAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIY 378

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC      +AN M+ L + KG  P+  TY+ LI G+ K  ++ + ++L+ +M  + +  
Sbjct: 379 GLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIA 438

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y++LI   CQ  KL  A K F+ M S  + PG+  Y  L+    + G   +AL + 
Sbjct: 439 DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGIL 498

Query: 362 EEM 364
           ++M
Sbjct: 499 DQM 501



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 169/368 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++   +C+ +E +G +  L + N +I+   +  +    +     + +    PN  T  T
Sbjct: 106 YDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNT 165

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++ LC  G++   V+++D +   +  P +I   +++  +  ++R+ E + L+ RM+   
Sbjct: 166 LLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANG 225

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +   Y  I+    K  N  SAL +  +M  R    +   YT  I   C+ G++++A 
Sbjct: 226 CQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDAL 285

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
               EME  G+K    T+N LI       R ++       M++RK+ P+   F+ +I  L
Sbjct: 286 SFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G   +A  +    + +G  PN ITY+ LI G   +  + E  ++   M  K   P +
Sbjct: 346 VKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDI 405

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI+  C+  ++++  + F+ M    ++     Y +L+    +      A  + +E
Sbjct: 406 WTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQE 465

Query: 364 MVSEGLKP 371
           MVS+G+ P
Sbjct: 466 MVSQGVHP 473



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 184/444 (41%), Gaps = 73/444 (16%)

Query: 2   RLFE-VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           R+FE V    C  L Q      LI+ NT+++ +   DR      +   M+ N   PN+ T
Sbjct: 175 RVFEAVELVDCMVLSQH--VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFT 232

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE--------- 111
              +++ +CK G   + +D+L ++  ++  P V+  T +I  + ++ R+++         
Sbjct: 233 YGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEME 292

Query: 112 --------------------------GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                                     G  LL+ M+ + +  + + +S ++ + VK   L 
Sbjct: 293 TKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLT 352

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +Y EM+ RG   N+  Y + I   C   +++EAN +M  M + G  P   T+N+LI
Sbjct: 353 EAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILI 412

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  KAK++++ +    +M  R ++     ++ +I+  C+      A  +    + +G  
Sbjct: 413 NGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVH 472

Query: 266 PNEITYSHLIGGYAKEGEIQEVL-----------------------------------KL 290
           P  +TY+ L+ G    GE++E L                                    L
Sbjct: 473 PGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSL 532

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           +  +  K +   + +Y  ++S LC+   L EAD  F+ MK     P    Y +L+  HL 
Sbjct: 533 FCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLR 592

Query: 351 KGNKAKALHLCEEMVSEGLKPSTS 374
             +   ++ L EEM   G     S
Sbjct: 593 GNDITTSVQLIEEMKRCGFSSDAS 616



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 163/353 (46%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           ++I FN L  ++ ++ + DLV  + + M L+ I Y +  T+  +I+  C+  +L      
Sbjct: 89  TVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAY-DLYTLNIMINCFCRRRKLGFAFSA 147

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           + +I      P  +   +L+  +  E R+ E + L+  M+    + D I  + IV     
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              +  A+ +   M+  G   N F Y   +   C+ G    A  L+++ME+  +KP+  T
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           + ++I+   K  R++++LS+  +M ++ +  +   +N +I   C  G       +L   +
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +  +PN +T+S LI    KEG++ E   LY EM  + I P    Y SLI  LC   +L+
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA++   +M S    P +  Y  L+    +       + L  +M   G+   T
Sbjct: 388 EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADT 440



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 136/286 (47%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P VI    L   + + ++ +  + L K+M  K + +D    ++++    + R L  A
Sbjct: 85  RPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFA 144

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
                ++ K G+  N+  + T +   C  G++ EA  L+  M  +   P   T N ++ G
Sbjct: 145 FSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNG 204

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                R+ E++    +MM+    P+   +  ++ R+C+ GN   A  +L     +   P+
Sbjct: 205 LCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPH 264

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            +TY+ +I    K+G + + L  + EME K I   +  Y SLI S C  G+ ++  +  +
Sbjct: 265 VVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR 324

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            M +  + P V  + +L+   +++G   +A  L  EM++ G++P+T
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT 370



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 154/323 (47%), Gaps = 10/323 (3%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +  R  + ++++F+ LI  + K  +      +Y  M+     PN  T  +LI  LC  
Sbjct: 324 RDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCND 383

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            +L     M+D +  K C P +     LI    + +++++GM L ++M  + MI DT+ Y
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S ++    + R L  A  V++EM+ +G       Y   +   C+ G++EEA  ++ +M  
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             ++     +N++I G   A +++++ S    + S+ +     ++N M+  LC+  +  +
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME---YKSISPTLPAYTS 308
           A+ +     + G+ P+  TY+ LI  + +  +I   ++L  EM+   + S + T+     
Sbjct: 564 ADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD 623

Query: 309 LISSLCQCGKLEEADKYFKIMKS 331
           ++SS        E DK F  M S
Sbjct: 624 MLSS-------GELDKSFLNMLS 639



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 120/263 (45%)

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           ++ + L + MLR   +   I ++ +     + +  +  L + ++M  +G + + +     
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  +C   K+  A   M ++   G +P   TFN L+ G     R+ E++   + M+  + 
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           +P     N ++  LC      +A  ++   +  G  PN+ TY  ++    K G     L 
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L  +ME++ I P +  YT +I +LC+ G+L++A  +F  M++  +   V  Y SL+G   
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
             G       L  +M++  + P+
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPN 334



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/206 (20%), Positives = 95/206 (46%), Gaps = 7/206 (3%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MRLF       R +  RG     ++++TLI    +S +  +  +++Q M+    +P   T
Sbjct: 425 MRLF-------RKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMT 477

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+  LC  G+L+  + +LD++H  +    + +   +I  +    ++++   L   + 
Sbjct: 478 YAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLP 537

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +  D  +Y++++    K  +L  A  ++ +M + G+  +   Y T I A+     I 
Sbjct: 538 SKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDIT 597

Query: 181 EANCLMQEMENAGLKPYDETFNLLIE 206
            +  L++EM+  G      T  ++++
Sbjct: 598 TSVQLIEEMKRCGFSSDASTVKIVMD 623


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 178/370 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+ + +  ++E  G    + +++T I    K+   D   ++++ M       NE T   +
Sbjct: 225 ELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVM 284

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LC+ G ++      + +     SP      +L+  + +  R++E   LL  M    +
Sbjct: 285 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGL 344

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y  +V   +K      A  + +EM+  G   N  +Y   I   C+ G++  A+ 
Sbjct: 345 KPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 404

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++EM   GL+P   T+N L++G  +    + +     +M +  +LP+  ++  MI  LC
Sbjct: 405 LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLC 464

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G +K+A  +L   + +G  PN   Y+ LI G++KEG I    +   +M   ++ P L 
Sbjct: 465 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLF 524

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y SLI  L   G++EEA++Y+  ++   LVP    Y  L+  + + GN  KA  L  +M
Sbjct: 525 CYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM 584

Query: 365 VSEGLKPSTS 374
           ++ GLKP+  
Sbjct: 585 LNSGLKPNAD 594



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 165/356 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G      ++N L+    +    D  + +   M  +   PN  +   +I+ LC+ G+ +  
Sbjct: 413 GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEA 472

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++L+ +  +   P   +   LI+   +E  I      L++M + N+  D   Y+ ++  
Sbjct: 473 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKG 532

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              +  +E A   Y ++ KRG   + F Y+  I  YC+ G +E+A+ L+++M N+GLKP 
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPN 592

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            +T+  L+EG  K+   E+  S  + M+     P    +  +IR L    N + A  +LT
Sbjct: 593 ADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 652

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  P+   YS LI G  K  ++++ + L  EM  + + P +  Y +LI   C+ G
Sbjct: 653 EVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSG 712

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  A   F  + +  LVP    Y +L+  + + G+   A  L +EM+  G+ P  
Sbjct: 713 DISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDA 768



 Score =  130 bits (327), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 161/355 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +++ + TL+    K  +    + I + M+     PN+     LI  LCK GQL   
Sbjct: 343 GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 402

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +      P       L+    Q+   +    LL  M    ++ +  +Y +++  
Sbjct: 403 SKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMING 462

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +    + A  + EEM+  G   N+F+Y   I  + + G I  A   +++M  A + P 
Sbjct: 463 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N LI+G +   R+EE+  Y  Q+  R L+P    ++ +I   C+ GN ++A+ +L 
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L+ G  PN  TY+ L+ GY K  + ++V  +   M      P    Y  +I +L +  
Sbjct: 583 QMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 642

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +E A      ++ + LVP + IY SL+    +  +  KA+ L +EM  EGL+P 
Sbjct: 643 NMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG 697



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 157/343 (45%), Gaps = 1/343 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            L  +N+LI  ++   R +     Y  + +    P+E T   LI   CK G L+    +L
Sbjct: 522 DLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLL 581

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P     T L+    +    E+   +L+ ML      D   Y +++    + 
Sbjct: 582 RQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 641

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+E A +V  E+ K G   +  +Y++ I   C+   +E+A  L+ EM   GL+P    +
Sbjct: 642 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCY 701

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G  ++  I  + +  + ++++ L+P+C  +  +I   C+ G+   A  +    LD
Sbjct: 702 NALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLD 761

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G +P+   Y+ L  G +   ++++ L L  EM  +  +  +  + +L+   C+ GKL+E
Sbjct: 762 RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQE 820

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +K   +M    +VP     E +V    + G   +A  +  E+
Sbjct: 821 TEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 157/358 (43%), Gaps = 37/358 (10%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N L+  + ++D  +L+W++   M      P+  T  T I A CK                
Sbjct: 212 NGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKA--------------- 256

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
                                  +    + + M R++   + + Y++++    +   +E 
Sbjct: 257 --------------------RDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 296

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A    EEM+  G S ++F Y   +   C+  +++EA  L+ EM  +GLKP    +  L++
Sbjct: 297 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVD 356

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K  +  E+    ++M+S  + P+   ++ +IR LC+ G   +A+ +L   +  G  P
Sbjct: 357 GFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRP 416

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +  TY+ L+ G+ ++ +     +L  EM    I P + +Y  +I+ LCQ G+ +EA    
Sbjct: 417 DTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLL 476

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
           + M S  L P   +Y  L+  H ++GN + A    E+M    + P     C  S  +G
Sbjct: 477 EEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHP--DLFCYNSLIKG 532



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 139/313 (44%), Gaps = 1/313 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG      +++ LIH   K+   +   ++ + ML +   PN  T   L+    K   
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSND 608

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +    +L  + G    P   +   +I  + + E +E   ++L  + +  ++ D   YS 
Sbjct: 609 YEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 668

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+ ++E A+ + +EM K G       Y   I  +C  G I  A  +   +   G
Sbjct: 669 LISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG 728

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+  LI+G  K   I ++    ++M+ R + P    +N +     +  + +QA 
Sbjct: 729 LVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQAL 788

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G++ N   ++ L+ G+ K G++QE  KL + M  + I P       ++S  
Sbjct: 789 FLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEF 847

Query: 314 CQCGKLEEADKYF 326
            + GKL EA + F
Sbjct: 848 GKAGKLGEAHRVF 860



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 143/307 (46%), Gaps = 1/307 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  + R +   G   +  ++  L+    KS+  + V  I Q ML +   P+      
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  L +   ++    +L  +      P + + +SLI  + +   +E+ + LL  M ++ 
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + Y+ ++    +  ++  A  V++ +L +G   N   YT  I   C+ G I +A 
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAF 753

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L +EM + G+ P    +N+L  GC+ A  +E++L   E+M +R    + S FN ++   
Sbjct: 754 DLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGF 812

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++   +L + +D+   PN  T   ++  + K G++ E  +++ E++ K  S + 
Sbjct: 813 CKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSA 872

Query: 304 PAYTSLI 310
               SL+
Sbjct: 873 TDRFSLL 879



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 61/148 (41%)

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           SR   PS +  + ++    + G+ + A  ++ +  D G +P     + L+    +   ++
Sbjct: 166 SRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAME 225

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            + KL   ME   I P +  Y++ I + C+    + A K F+ M+          Y  ++
Sbjct: 226 LLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 285

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
                 G   +A    EEMV  GL P  
Sbjct: 286 SGLCRSGAVEEAFGFKEEMVDYGLSPDA 313


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 179/363 (49%), Gaps = 1/363 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L++   S  ++++NT++  +  S +      +   ML+   YP+  T   LI A C+   
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +LD +  + C+P V+    L+  I +E R++E +  L  M       + I +++
Sbjct: 255 VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +         A  +  +ML++GFS +   +   I   C  G +  A  ++++M   G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   ++N L+ G  K K+++ ++ Y E+M+SR   P    +N M+  LC+ G  + A 
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L     KG SP  ITY+ +I G AK G+  + +KL  EM  K + P    Y+SL+  L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
            + GK++EA K+F   +   + P    + S++    +     +A+     M++ G KP+ 
Sbjct: 495 SREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTE 554

Query: 373 TSY 375
           TSY
Sbjct: 555 TSY 557



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 176/370 (47%), Gaps = 3/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F     +   G    +I   TLI    +  +     +I + +  +   P+  T   
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +IS  CK G++   + +LDR+     SP V+   +++  +    ++++ M +L RML+++
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++++ A  +   +  A+ + +EM  RG + +   Y   +   C+ G+++EA 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             + +M ++G +P   T N+++       R  ++      M+ +   PS   FN +I  L
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A  +L      G  PN ++Y+ L+ G+ KE ++   ++    M  +   P +
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +++++LC+ GK+E+A +    + S    P +  Y +++    + G   KA+ L +E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474

Query: 364 MVSEGLKPST 373
           M ++ LKP T
Sbjct: 475 MRAKDLKPDT 484



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 122/272 (44%), Gaps = 3/272 (1%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           ++++   +EEG   L+ M+    + D I  + ++    +M     A  + E +   G   
Sbjct: 111 QLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVP 170

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y   I  YC+ G+I  A  ++  M    + P   T+N ++     + ++++++   
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M+ R   P    +  +I   C      QA  +L    D+G +P+ +TY+ L+ G  KE
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E +K   +M      P +  +  ++ S+C  G+  +A+K    M      P V  +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     KG   +A+ + E+M   G +P++
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 118/233 (50%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A D+   + + G   + +S+N L+H   K  + D      + M+    YP+  T  
Sbjct: 359 LLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+++ALCK G+++  V++L+++  K CSP++I   ++I  + +  +  + + LL  M  K
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           ++  DTI YS +V    +   ++ A+  + E  + G   N+  + + +   C+  + + A
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRA 538

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              +  M N G KP + ++ +LIEG A     +E+L    ++ ++ L+   SA
Sbjct: 539 IDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSA 591


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 176/349 (50%), Gaps = 3/349 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRT 63
           A DV   ++  G S ++I++NTLI    K  R   +++   I + M+     PNE T   
Sbjct: 174 AGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNI 233

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK   +   + +   +  +   P V+    LI  +  + +++E + L  +M+  +
Sbjct: 234 LIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSD 293

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + +++++    K + +  A+ ++ +M K+G   N+  YTT I AYC+ G++E+A 
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAF 353

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M + G+ P   T+N LI G  +   ++ + S   +M+S+KL      +N +I  L
Sbjct: 354 ALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSL 413

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G +++A  +L    +KG +P+ +TY+ L+ GY +EG ++  L +   ME K     +
Sbjct: 414 CKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANV 473

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
             +  LI   C  G+LE+A+     M    LVP    YE +    +EKG
Sbjct: 474 VTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 3/365 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F+  +     GF LSLIS N L+  + K   N  +  +Y+ M++     N  +   +++
Sbjct: 104 GFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVN 163

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE---GMVLLKRMLRKN 123
            LCK G+L    D+++ +     SP VI   +LI    +  RI +      +LK M+ K 
Sbjct: 164 GLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG 223

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y++++    K  N+  A+ V+ EM ++G   N   Y   I   C  GK++EA 
Sbjct: 224 ICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAV 283

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M ++ L+P   T N+LI G  K K + E+++    M  + + P+   +  +I   
Sbjct: 284 ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAY 343

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  + A  +  + +D+G  P   TY+ LI G  ++G+++    L  EM  K +S  +
Sbjct: 344 CKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV 403

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI SLC+ G+  +A K    M    L P    Y +L+  +  +GN   AL +   
Sbjct: 404 VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTR 463

Query: 364 MVSEG 368
           M  +G
Sbjct: 464 MERKG 468



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 5/295 (1%)

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
           I+   L+L  ++  +I  G    KR          I+ + ++   VK         VY E
Sbjct: 86  ILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYRE 145

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M+KR    N   +   +   C+ GK+  A  ++++M+  G+ P   T+N LI+G  K  R
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205

Query: 214 IEE---SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           I +   + +  ++M+++ + P+   +N +I   C+  N   A  +      +G  PN +T
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI G   +G++ E + L  +M    + P +  +  LI+  C+   + EA   F  M+
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS-YLC-SASTCR 383
              + P    Y +L+  + + G    A  L   M+  G+ P  S Y C  A  CR
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 186/409 (45%), Gaps = 39/409 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDL---VWRIYQHMLENIRYPN 57
           + + + A +     +  GF   ++S+N+++  + +S R  +      +Y+ M+ +   PN
Sbjct: 155 LNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRS-RGSVKLSAEEVYREMIRSRVSPN 213

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             T   LI   C  G+LQ  +     +    C P V+   +LI    +  RI+E   LLK
Sbjct: 214 VYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK 273

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M  K M  + I+Y++I+    +  +++ A  + EEM  +GF+ +   Y T +  YC+ G
Sbjct: 274 SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 333

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP------ 231
              +A  +  EM   G+ P   T+  LI    KA+ +  ++ + +QM  R L P      
Sbjct: 334 NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 393

Query: 232 -----------------------------SCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
                                        S   +N  I   C     ++A G++   ++K
Sbjct: 394 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 453

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G +P+ ++YS +I G+ ++GE+    ++  EM  K +SP    Y+SLI  LC+  +L EA
Sbjct: 454 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 513

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
               + M    L P    Y +L+  +  +G+  KALHL +EM+ +G  P
Sbjct: 514 CDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP 562



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 180/382 (47%), Gaps = 15/382 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  +GF+   +++NTL++   K         I+  M+ N   P+  T   LI+
Sbjct: 303 AWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALIN 362

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ++CK   L   ++  D++  +   P     T+LI    ++  + E   +L  M       
Sbjct: 363 SMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 422

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+  ++    +  +E AL V +EM+++G + +   Y+T I  +C  G+++ A  + 
Sbjct: 423 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 482

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM   G+ P   T++ LI+G  + +R+ E+    ++M+   L P    +  +I   C  
Sbjct: 483 QEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE 542

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +    + KGF P+ +TYS LI G  K+   +E  +L +++ Y+   P+   Y
Sbjct: 543 GDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTY 602

Query: 307 TSLISS---------------LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +LI +                C  G + EAD+ F+ M   +  PG  +Y  ++  H   
Sbjct: 603 DTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRG 662

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           GN  KA +L +EM+  G  P T
Sbjct: 663 GNLPKAFNLYKEMIHSGFVPHT 684



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 169/359 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++NTLI    K  R D  + + + M      PN  +   +I+ LC+ G 
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++L+ +  K  +P  +   +L+    +E    + +V+   M+R  +    + Y+ 
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ +  K RNL  A+  +++M  RG   N   YTT I  +   G + EA  ++ EM  +G
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N  I G    +R+EE+L   ++M+ + L P   +++ +I   C  G   +A 
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 479

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M    ++KG SP+ +TYS LI G  +   + E   L  EM    + P    YT+LI++ 
Sbjct: 480 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 539

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G L +A      M     +P    Y  L+    ++    +A  L  +++ E   PS
Sbjct: 540 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 598



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 2/246 (0%)

Query: 129 IAYSLIVYAKVKMRNLE--SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           ++Y+ ++ A V+ R     SA  VY EM++   S N + Y   I  +C  G++++     
Sbjct: 178 LSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCF 237

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EME  G  P   T+N LI+   K  RI+E+    + M S+ + P+  ++N +I  LC  
Sbjct: 238 GEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCRE 297

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  +L     KGF+P+E+TY+ L+ GY KEG   + L ++ EM    +SP++  Y
Sbjct: 298 GSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTY 357

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+LI+S+C+   L  A ++F  M+   L P    Y +L+     +G   +A  +  EM  
Sbjct: 358 TALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTE 417

Query: 367 EGLKPS 372
            G  PS
Sbjct: 418 SGFSPS 423



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 178/420 (42%), Gaps = 50/420 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  +   + + G S S++++  LI+ + K+   +     +  M      PNE T  T
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    + G L     +L+ +     SP V+   + I      ER+EE + +++ M+ K 
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D ++YS I+    +   L+ A  + +EM+++G S ++  Y++ I   CE  ++ EA 
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L QEM + GL P + T+  LI        + ++L   ++M+ +  LP    ++ +I  L
Sbjct: 515 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 574

Query: 244 CECGNAKQANGML-----------------------------TLALDKGF---------- 264
            +    ++A  +L                              +AL KGF          
Sbjct: 575 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 634

Query: 265 -----------SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                       P E  Y+ +I G+ + G + +   LY EM +    P      +LI +L
Sbjct: 635 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 694

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G  EE  +          +   ++ + LV I+ ++GN    L++  +M  +GL P++
Sbjct: 695 FKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 179/359 (49%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +AF     + + G+  + I+F+TLI+ +    R      +   M+E    P+  TI TL+
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LC  G+    + ++D++    C P  +    ++  + +  +    M LL++M  +N+ 
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + YS+I+    K  +L++A  ++ EM  +G + N   Y   IG +C  G+ ++   L
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++M    + P   TF++LI+   K  ++ E+    ++M+ R + P    +  +I   C+
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             +  +AN M+ L + KG  PN  T++ LI GY K   I + L+L+ +M  + +      
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           Y +LI   C+ GKL  A + F+ M S  + P +  Y+ L+    + G   KAL + E++
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 171/349 (48%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++  +++V+ KS +  L   + + M E     +      +I  LCK G L    ++ + 
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K  +  +I    LI       R ++G  LL+ M+++ +  + + +S+++ + VK   
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L  A  +++EM+ RG + ++  YT+ I  +C+   +++AN ++  M + G  P   TFN+
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  KA RI++ L    +M  R ++     +N +I+  CE G    A  +    + + 
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN +TY  L+ G    GE ++ L+++ ++E   +   +  Y  +I  +C   K+++A 
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F  +    + PGV  Y  ++G   +KG  ++A  L  +M  +G  P 
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 175/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++   +C+ +E +G + +L + + +I+   +  +  L +     +++    PN  T  T
Sbjct: 104 YDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFST 163

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G++   ++++DR+      P +I   +L+  +    +  E M+L+ +M+   
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y  ++    K      A+ +  +M +R    ++  Y+  I   C++G ++ A 
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EME  G+     T+N+LI G   A R ++       M+ RK+ P+   F+ +I   
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A  +    + +G +P+ ITY+ LI G+ KE  + +  ++   M  K   P +
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  LI+  C+  ++++  + F+ M    +V     Y +L+    E G    A  L +E
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463

Query: 364 MVSEGLKPS 372
           MVS  + P+
Sbjct: 464 MVSRKVPPN 472



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 144/306 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +E +G + ++I++N LI     + R D   ++ + M++    PN  T   LI 
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +  K G+L+   ++   +  +  +P  I  TSLI    +E  +++   ++  M+ K    
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   +++++    K   ++  L ++ +M  RG  A++  Y T I  +CE GK+  A  L 
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM +  + P   T+ +L++G       E++L   E++   K+      +N +I  +C  
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                A  +      KG  P   TY+ +IGG  K+G + E   L+ +ME    +P    Y
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581

Query: 307 TSLISS 312
             LI +
Sbjct: 582 NILIRA 587



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 166/353 (47%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           ++I F+ L   + K+ + DLV  + + M L+ I + N  T+  +I+  C+  +L      
Sbjct: 87  TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFSA 145

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           + +I      P  I  ++LI  +  E R+ E + L+ RM+      D I  + +V     
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A+++ ++M++ G   N+  Y   +   C+ G+   A  L+++ME   +K     
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++++I+G  K   ++ + +   +M  + +  +   +N +I   C  G       +L   +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +  +PN +T+S LI  + KEG+++E  +L+ EM ++ I+P    YTSLI   C+   L+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +A++   +M S    P +  +  L+  + +       L L  +M   G+   T
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 1/292 (0%)

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D IH  R  P VI  + L   I + ++ +  + L K+M  K + H+    S+++    + 
Sbjct: 78  DMIH-SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 136

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           R L  A     +++K G+  N+  ++T I   C  G++ EA  L+  M   G KP   T 
Sbjct: 137 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 196

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L+ G   + +  E++   ++M+     P+   +  ++  +C+ G    A  +L    +
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +    + + YS +I G  K G +     L+ EME K I+  +  Y  LI   C  G+ ++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             K  + M    + P V  +  L+   +++G   +A  L +EM+  G+ P T
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 125/299 (41%), Gaps = 35/299 (11%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R  + ++++F+ LI    K  +      +++ M+     P+  T  +LI   CK 
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             L     M+D +  K C P +     LI    +  RI++G+ L ++M  + ++ DT+ Y
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA--------- 182
           + ++    ++  L  A  +++EM+ R    N   Y   +   C+ G+ E+A         
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501

Query: 183 ----------NCLMQEMENA----------------GLKPYDETFNLLIEGCAKAKRIEE 216
                     N ++  M NA                G+KP  +T+N++I G  K   + E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           +     +M      P    +N +IR     G+A ++  ++      GFS +  T   +I
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 180/353 (50%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLISALCKGGQLQTYVDM 80
           S+I F+ L+  + K ++ D+V  + + M +N+  P N  T   L++  C+  QL   + +
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++  +SL+      +RI E + L+ +M+      DT+ ++ +++    
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A+ + + M+ RG   + F Y T +   C+ G I+ A  L+++ME   ++     
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVI 258

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N +I+G  K K ++++     +M ++ + P    +N +I  LC  G    A+ +L+  +
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  +PN +T++ LI  +AKEG++ E  KL+ EM  +SI P +  Y SLI+  C   +L+
Sbjct: 319 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 378

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA + F +M S   +P V  Y +L+    +     + + L  EM   GL  +T
Sbjct: 379 EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 431



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 169/358 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG    L ++ T+++ + K    DL   + + M +     N     T+I  LCK   +  
Sbjct: 215 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDD 274

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+ +++  K   P V    SLI  +    R  +   LL  M+ + +  + + ++ ++ 
Sbjct: 275 AFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID 334

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   L  A  +++EM++R    N   Y + I  +C + +++EA  +   M +    P
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 394

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI+G  KAKR+EE +    +M  R L+ +   +N +I+ L + G+   A  + 
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +  G  P+ ITYS L+ G  K G++++ L ++  ++   + P +  Y  +I  +C+ 
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           GK+E+    F  +    + P V IY +++     KG K +A  L  EM  +G  P + 
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG 572



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 175/367 (47%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+   +++ ++L++      R      +   M+E    P+  T  TLI
Sbjct: 134 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLI 193

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L    +    V ++DR+  + C P +    +++  + +   I+  + LLK+M +  + 
Sbjct: 194 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 253

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + + Y+ I+    K ++++ A  ++ +M  +G   + F Y + I   C YG+  +A+ L
Sbjct: 254 ANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRL 313

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M    + P   TFN LI+  AK  ++ E+    ++M+ R + P+   +N +I   C 
Sbjct: 314 LSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 373

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  + TL + K   P+ +TY+ LI G+ K   ++E ++L+ EM  + +      
Sbjct: 374 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI  L Q G  + A K FK M S  + P +  Y  L+    + G   KAL + E + 
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493

Query: 366 SEGLKPS 372
              ++P+
Sbjct: 494 KSKMEPN 500



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 170/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F+V   +   ++  G   +  +++ L++   +  +  L   +   M++    P+  T
Sbjct: 94  MNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVT 153

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  +   +LI  +    +  E + L+ RM+
Sbjct: 154 LSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMV 213

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +    D   Y  +V    K  +++ AL + ++M K    AN  +Y T I   C+Y  ++
Sbjct: 214 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMD 273

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  +ME  G+KP   T+N LI       R  ++      M+ RK+ P+   FN +I
Sbjct: 274 DAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLI 333

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   PN +TY+ LI G+     + E  +++  M  K   
Sbjct: 334 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 393

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI   C+  ++EE  + F+ M    LV     Y +L+    + G+   A  +
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P 
Sbjct: 454 FKKMVSDGVPPD 465



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 156/329 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   +E +G    + ++N+LI  +    R     R+   M+E    PN  T  +LI 
Sbjct: 275 AFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLID 334

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K G+L     + D +  +   P ++   SLI      +R++E   +   M+ K+ + 
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 394

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++    K + +E  + ++ EM +RG   N+  Y T I    + G  + A  + 
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G+ P   T+++L++G  K  ++E++L   E +   K+ P+   +N MI  +C+ 
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKA 514

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  +    +      KG  PN I Y+ +I G+ ++G  +E   L+ EM+     P    Y
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 574

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            +LI +  + G    + +  K M+S   V
Sbjct: 575 NTLIRARLRDGDKAASAELIKEMRSCGFV 603



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 2/301 (0%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   V +   +   R  P +I  + L+  I +  + +  + L ++M    + H+   YS
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL V  +M+K G+  +    ++ +  YC   +I EA  L+ +M   
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G KP   TFN LI G     +  E+++  ++M++R   P    +  ++  LC+ G+   A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             +L   ++KG    N + Y+ +I G  K   + +   L+ +ME K I P +  Y SLIS
Sbjct: 241 LSLLK-KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+  +A +    M    + P V  + SL+    ++G   +A  L +EM+   + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359

Query: 372 S 372
           +
Sbjct: 360 N 360



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 123/270 (45%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + E ++++ + L   M++       I +S ++ A  KM   +  + + E+M   G   N 
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y+  +  +C   ++  A  ++ +M   G +P   T + L+ G    KRI E+++  +Q
Sbjct: 117 YTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 176

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P    FN +I  L     A +A  ++   + +G  P+  TY  ++ G  K G+
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           I   L L  +ME   I   +  Y ++I  LC+   +++A   F  M++  + P V  Y S
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L+      G  + A  L  +M+   + P+ 
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNV 326



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 114/260 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QR    +++++N+LI+     DR D   +I+  M+     P+  T  TLI   CK  +++
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  +      +   +LI  + Q    +    + K+M+   +  D I YS+++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   LE ALVV+E + K     N + Y   I   C+ GK+E+   L   +   G+K
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  +I G  +    EE+ +   +M     LP    +N +IR     G+   +  +
Sbjct: 534 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAEL 593

Query: 256 LTLALDKGFSPNEITYSHLI 275
           +      GF  +  T S +I
Sbjct: 594 IKEMRSCGFVGDASTISMVI 613



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 35/239 (14%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   ++ R + QRG   + +++NTLI  + ++   D+  +I++ M+ +   P+  T   L
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G+L                                   E+ +V+ + + +  M
Sbjct: 473 LDGLCKYGKL-----------------------------------EKALVVFEYLQKSKM 497

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   Y++++    K   +E    ++  +  +G   N  +YTT I  +C  G  EEA+ 
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 557

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           L +EM+  G  P    +N LI    +      S    ++M S   +   S  + +I  L
Sbjct: 558 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 179/363 (49%), Gaps = 1/363 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L++   S  ++++NT++  +  S +      +   ML+   YP+  T   LI A C+   
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +LD +  + C+P V+    L+  I +E R++E +  L  M       + I +++
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +         A  +  +ML++GFS +   +   I   C  G +  A  ++++M   G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   ++N L+ G  K K+++ ++ Y E+M+SR   P    +N M+  LC+ G  + A 
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L     KG SP  ITY+ +I G AK G+  + +KL  EM  K + P    Y+SL+  L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
            + GK++EA K+F   +   + P    + S++    +     +A+     M++ G KP+ 
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554

Query: 373 TSY 375
           TSY
Sbjct: 555 TSY 557



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 176/370 (47%), Gaps = 3/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F     +   G    +I   TLI    +  +     +I + +  +   P+  T   
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +IS  CK G++   + +LDR+     SP V+   +++  +    ++++ M +L RML+++
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++++ A  +   +  A+ + +EM  RG + +   Y   +   C+ G+++EA 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             + +M ++G +P   T N+++       R  ++      M+ +   PS   FN +I  L
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A  +L      G  PN ++Y+ L+ G+ KE ++   ++    M  +   P +
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +++++LC+ GK+E+A +    + S    P +  Y +++    + G   KA+ L +E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474

Query: 364 MVSEGLKPST 373
           M ++ LKP T
Sbjct: 475 MRAKDLKPDT 484



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 121/272 (44%), Gaps = 3/272 (1%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           ++++   +EEG   L+ M+    + D I  + ++    ++     A  + E +   G   
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y   I  YC+ G+I  A  ++  M    + P   T+N ++     + ++++++   
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M+ R   P    +  +I   C       A  +L    D+G +P+ +TY+ L+ G  KE
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E +K   +M      P +  +  ++ S+C  G+  +A+K    M      P V  +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     KG   +A+ + E+M   G +P++
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 118/233 (50%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A D+   + Q G   + +S+N L+H   K  + D      + M+    YP+  T  
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+++ALCK G+++  V++L+++  K CSP++I   ++I  + +  +  + + LL  M  K
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           ++  DTI YS +V    +   ++ A+  + E  + G   N+  + + +   C+  + + A
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              +  M N G KP + ++ +LIEG A     +E+L    ++ ++ L+   SA
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 175/359 (48%), Gaps = 19/359 (5%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ RG     ++F   I   +K+ +     + +  ML++   PN      LI+   K G 
Sbjct: 246 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 305

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   + +   +H     P V   ++ I  +++  R++E + +   +  K ++ D   YS 
Sbjct: 306 LMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 365

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E A  +++EM  +G + N F+Y   +   C+ G I+ A  L   M   G
Sbjct: 366 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 425

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P   T++ +I+G  K++ + E+ S   +M S+ + P    +N ++   C+ G+ ++A 
Sbjct: 426 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 485

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L KGF+   ++++ LI GY K  +IQE  +L+ EM  K I P    YT++I   
Sbjct: 486 NLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 544

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ GK+EEA+  FK M+  +L+  VD   +L                 E+MV++G+KP 
Sbjct: 545 CKAGKMEEANLLFKEMQERNLI--VDTVFALF----------------EKMVAKGVKPD 585



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 182/394 (46%), Gaps = 41/394 (10%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++LI++N LIH + K  + +    I + M+     PN  T   LI   C+   +   
Sbjct: 75  GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 134

Query: 78  VDMLDRI--------------------HGKRCS---------------PMVIVNTSLILR 102
           +++LD +                    H K  S               P V+V ++LI+ 
Sbjct: 135 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 194

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
              E RIEE   LL  M    +  D   Y+ I+    K   +E A     E+  RG   +
Sbjct: 195 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 254

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           +  +  FI  Y + GK+ EA     EM + GL P +  + +LI G  KA  + E+LS   
Sbjct: 255 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 314

Query: 223 QMMSRKLLP---SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
            + +  +LP   +CSAF   I  L + G  ++A  + +   +KG  P+  TYS LI G+ 
Sbjct: 315 HLHALGVLPDVQTCSAF---IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 371

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+GE+++  +L+ EM  K I+P +  Y +L+  LC+ G ++ A K F  M    L P   
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Y +++  + +  N A+A  L  EM S+G++P +
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 465



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 180/387 (46%), Gaps = 18/387 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R+L   G    + + +  IH + K+ R     +++  + E    P+  T  +LIS
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+++   ++ D +  K  +P + +  +L+  + +   I+    L   M  K +  
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D++ YS ++    K  N+  A  ++ EM  +G   +SFVY   +   C+ G +E+A  L 
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 488

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G      +FN LI+G  K+ +I+E+    ++M++++++P    +  +I   C+ 
Sbjct: 489 REMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 547

Query: 247 GNAKQANGML------TLALD-----------KGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           G  ++AN +        L +D           KG  P+E+TY  +I  + KE  + E  K
Sbjct: 548 GKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 607

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L  E+  K +      +  LI++LC+   L EA K    M    L P +    +LV    
Sbjct: 608 LRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFH 667

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTSYL 376
           E G   +A  + E + S GL P T+ L
Sbjct: 668 EAGKMDEATRVFEGVKSLGLVPDTTTL 694



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 137/283 (48%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P     T +   + + +R+ E  +  + M +  +  D  A S ++   ++  +++  L +
Sbjct: 8   PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
            + M+  G   N   Y   I   C++GK+E+A  +++ M   G KP   TF LLIEG  +
Sbjct: 68  KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              +  +L   ++M  R L+PS  ++  MI  LC C +   AN +L      G  PN + 
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           YS LI GYA EG I+E  +L   M    ++P +  Y ++IS L + GK+EEA  Y   ++
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              L P    + + +  + + G   +A    +EM+  GL P+ 
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 290



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 169/369 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E+R    S +S+  +I+ +       L  ++ + M  +   PN     TLI 
Sbjct: 134 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 193

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G+++    +LD +     +P +    ++I  + +  ++EE    L  +  + +  
Sbjct: 194 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 253

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + +   +    K   +  A   ++EML  G   N+ +YT  I  + + G + EA  + 
Sbjct: 254 DAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 313

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + +   G+ P  +T +  I G  K  R++E+L    ++  + L+P    ++ +I   C+ 
Sbjct: 314 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 373

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +      KG +PN   Y+ L+ G  K G+IQ   KL+  M  K + P    Y
Sbjct: 374 GEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 433

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +++I   C+   + EA   F  M S  + P   +Y +LV    ++G+  KA++L  EM+ 
Sbjct: 434 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 493

Query: 367 EGLKPSTSY 375
           +G   + S+
Sbjct: 494 KGFATTLSF 502



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 163/355 (45%), Gaps = 1/355 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +++ ++TLI       R +   R+   M  +   P+      +IS L K G+++  
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
              L  I G+   P  +   + IL   +  ++ E       ML   ++ +   Y++++  
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  NL  AL ++  +   G   +    + FI    + G+++EA  +  E++  GL P 
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ LI G  K   +E++    ++M  + + P+   +N ++  LC+ G+ ++A  +  
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG  P+ +TYS +I GY K   + E   L++EM  K + P    Y +L+   C+ G
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +E+A   F+ M        +  + +L+  + +     +A  L +EM+++ + P 
Sbjct: 480 DMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 163/361 (45%), Gaps = 19/361 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF++   +  +G + ++  +N L+  + KS       +++  M E    P+  T  T+
Sbjct: 377 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 436

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK   +     +   +  K   P   V  +L+    +E  +E+ M L + ML+K  
Sbjct: 437 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 496

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              T++++ ++    K   ++ A  +++EM+ +    +   YTT I  +C+ GK+EEAN 
Sbjct: 497 A-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 555

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM+   L   D  F L                  E+M+++ + P    +  +I   C
Sbjct: 556 LFKEMQERNL-IVDTVFALF-----------------EKMVAKGVKPDEVTYGLVIYAHC 597

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  N  +A  +    + KG       +  LI    K  ++ E  KL  EM    + P+L 
Sbjct: 598 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 657

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A ++L+ S  + GK++EA + F+ +KS  LVP       LV  +L   +   A +L +++
Sbjct: 658 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717

Query: 365 V 365
           V
Sbjct: 718 V 718



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 109/219 (49%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M ++G   N++ YT      C   ++ EA    +EM+  GLKP     + LI+G  +   
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           I+E L   + M+S  +  +   +N +I  LC+ G  ++A  +L   +  G  PN  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI GY +E  +   L+L  EME +++ P+  +Y ++I+ LC C  L  A+K  + M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L P V +Y +L+  +  +G   +A  L + M   G+ P 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPD 219



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 58/148 (39%), Gaps = 35/148 (23%)

Query: 261 DKGFSPNEITY-----------------------------------SHLIGGYAKEGEIQ 285
           +KG  PN  TY                                   S LI G+ +EG+I 
Sbjct: 3   EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           EVL++   M    I   L  Y  LI  LC+ GK+E+A +  K M +    P    +  L+
Sbjct: 63  EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +  + N  +AL L +EM    L PS 
Sbjct: 123 EGYCREHNMGRALELLDEMEKRNLVPSA 150


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 165/349 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            S+N +I  + ++ R      ++  M E    PN  T  T+I    KGG L+    + D+
Sbjct: 197 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQ 256

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P  I    L+  + +  R+ E   LL  M  + M+ D   YS++     +  +
Sbjct: 257 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 316

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            ++ L ++ + LK G +   +  +  +   C+ GK+  A  ++Q + NAGL P    +N 
Sbjct: 317 SKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 376

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  +   +E + S   QM SR + P    +N +I  LC+      A  +L    D G
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 436

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +P   T++ LI  Y + G++++   +  EM+   + P + +Y S++++ C+ GK+ EA 
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                M    ++P   +Y +++  ++E G   +A  L E+M S G+ PS
Sbjct: 497 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 545



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 168/399 (42%), Gaps = 35/399 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + +R    + I++NT+I    K    +  + +   M+ +   PN  T   L+S
Sbjct: 215 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLS 274

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSP---------------------MVIVNTSL------ 99
            LC+ G++     +LD +  ++  P                     + +   SL      
Sbjct: 275 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTI 334

Query: 100 ---ILRIIQEERIEEGMV-----LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                 I+     ++G V     +L+ ++   ++   + Y+ ++    +   LE A   +
Sbjct: 335 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            +M  R    +   Y   I   C+  +I  A  L+ EM++ G+ P  ETFN LI+   + 
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            ++E+      +M    L P+  ++  ++   C+ G   +A  +L     K   PN   Y
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I  Y + G   +   L  +M+   ISP++  Y  LI  LC   ++ EA++    + +
Sbjct: 515 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 574

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           H L+P    Y +L+     +GN  KAL L + M   G+K
Sbjct: 575 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 165/353 (46%), Gaps = 2/353 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G ++   + + L++ + K  +  +   + Q ++     P      TLI+  C+ G+L+
Sbjct: 329 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 388

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AYSLI 134
                  ++  +   P  I   +LI  + + ERI     LL  M + N ++ T+  ++ +
Sbjct: 389 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDNGVNPTVETFNTL 447

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           + A  +   LE   +V  EM + G   N   Y + + A+C+ GKI EA  ++ +M +  +
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P  + +N +I+   +    +++    E+M S  + PS   +N +I+ LC      +A  
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           ++    +    P+ ++Y+ LI      G I + L L   M    I  T+  Y  LIS L 
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 627

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
             G+L E +  ++ M  +++VP   I+  +V  + + GN+ KA  L +EM+ +
Sbjct: 628 GAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 159/351 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            +++ L   ++++  +  +  ++   L+N     + T   L++ LCK G++    ++L  
Sbjct: 302 FTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P  ++  +LI    Q   +E       +M  +++  D I Y+ ++    K   
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 421

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           + +A  +  EM   G +     + T I AY   G++E+   ++ EM+  GLKP   ++  
Sbjct: 422 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 481

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++    K  +I E+++  + M  + +LP+   +N +I    E G   QA  ++      G
Sbjct: 482 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 541

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+ +TY+ LI G   + +I E  ++   +    + P   +Y +LIS+ C  G +++A 
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 601

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              + M  + +   V  Y  L+      G   +  +L ++M+   + PS +
Sbjct: 602 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNA 652



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 1/263 (0%)

Query: 111 EGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           E + +L+RM R      +  +Y++++    +      A+ V++EM +R    N   Y T 
Sbjct: 178 EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 237

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  + + G +E    L  +M   GLKP   T+N+L+ G  +A R+ E+ +  ++M S+K+
Sbjct: 238 IDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 297

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           +P    ++ +   L   G++K    +   +L  G +  + T S L+ G  K+G++    +
Sbjct: 298 VPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 357

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           +   +    + PT   Y +LI+  CQ G+LE A   F  MKS  + P    Y +L+    
Sbjct: 358 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 417

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           +      A  L  EM   G+ P+
Sbjct: 418 KAERITNAQDLLMEMQDNGVNPT 440



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 114/246 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   ++  G + ++ +FNTLI    ++ + +  + +   M EN   PN  +  ++++
Sbjct: 425 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 484

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G++   V +LD +  K   P   V  ++I   ++    ++  +L+++M    +  
Sbjct: 485 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 544

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+L++        +  A  +   +       ++  Y T I A C  G I++A  L 
Sbjct: 545 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 604

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           Q M   G+K    T++ LI G   A R+ E     ++MM   ++PS +  N M+    + 
Sbjct: 605 QRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKY 664

Query: 247 GNAKQA 252
           GN  +A
Sbjct: 665 GNEIKA 670



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 126/294 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF     ++ R      I++N LI+ + K++R      +   M +N   P   T  T
Sbjct: 387 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 446

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A  + GQL+    +L  +      P V+   S++    +  +I E + +L  M  K+
Sbjct: 447 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 506

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   Y+ I+ A V+    + A ++ E+M   G S +   Y   I   C   +I EA 
Sbjct: 507 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 566

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  + N  L P   ++N LI  C     I+++L   ++M    +  +   ++++I  L
Sbjct: 567 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 626

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
              G   +   +    +     P+   ++ ++  Y+K G   +   L  EM  K
Sbjct: 627 GGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 4/192 (2%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF--NEMIRRLCEC 246
           + +AG +P    +N  ++ C  A  + E++    + M R   P  +AF  N +I  +   
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRR-MGRDGAPPPNAFSYNVVIAGMWRA 209

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +     ++   PN ITY+ +I G+ K G+++    L  +M    + P    Y
Sbjct: 210 GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITY 269

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+S LC+ G++ E       M S  +VP    Y  L       G+    L L  + + 
Sbjct: 270 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLK 329

Query: 367 EGLKPSTSYLCS 378
            G+     Y CS
Sbjct: 330 NGVTIG-DYTCS 340


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 3/365 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V R ++  GF LSL S N L+  + K +    +  +Y+ M++    PN  T    I+
Sbjct: 149 ACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFIN 208

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRKN 123
            LCK G+L    D+++ I     SP ++   +LI    +     ++     +LK ML   
Sbjct: 209 GLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK 268

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I ++ ++    K  N+ +A   +EEM ++G   N   Y + I      GK++EA 
Sbjct: 269 ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAI 328

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M   GLKP   TFN LI G  K K I+E+    + +  + L+P+   FN MI   
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAF 388

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++   +    LD+G  PN  TY+ LI G  +   ++   KL  EME   +   +
Sbjct: 389 CKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADV 448

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI   C+ G+  +A+K    M +  + P    Y +L+  +  +GN   AL +  +
Sbjct: 449 VTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQ 508

Query: 364 MVSEG 368
           M  EG
Sbjct: 509 MEKEG 513



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 168/349 (48%), Gaps = 3/349 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRT 63
           A DV   ++  GFS +++++NTLI    K      ++R   I + ML N   PNE T  T
Sbjct: 219 AEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNT 278

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK   +    +  + +  +   P ++   SLI  +    +++E + L  +M+   
Sbjct: 279 LIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLG 338

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + ++ ++    K + ++ A  +++++ ++    N+  + T I A+C+ G +EE  
Sbjct: 339 LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M + G+ P   T+N LI G  + + +  +     +M + +L      +N +I   
Sbjct: 399 ALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGW 458

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +L   L+ G  PN +TY+ L+ GY  EG ++  LK+  +ME +     +
Sbjct: 459 CKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANV 518

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
             Y  LI   C+ GKLE+A++    M    L P    Y+ +    LEKG
Sbjct: 519 VTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 13/289 (4%)

Query: 95  VNTSLILRIIQ----EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV- 149
           V++ L+LR  Q    E RI  G+    ++L   ++ ++  YS +     K+   E   V 
Sbjct: 56  VDSELVLRFFQWSQKEFRISYGLETTGKVLH--LLANSKKYSKVRSFLDKLVKNEKHTVS 113

Query: 150 -VYEEMLKRGFS--ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
            V+  +L  G    AN+ +    + AY    +I  A  + + +++ G K    + N L+ 
Sbjct: 114 SVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLS 173

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              K     E     ++M+ R++ P+ + FN  I  LC+ G   +A  ++      GFSP
Sbjct: 174 ALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSP 233

Query: 267 NEITYSHLIGGYAKEGEIQEVLK---LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           N +TY+ LI G+ K+G   ++ +   +  EM    I P    + +LI   C+   +  A 
Sbjct: 234 NIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAK 293

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F+ M+   L P +  Y SL+      G   +A+ L ++MV  GLKP+
Sbjct: 294 NAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPN 342


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 160/311 (51%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI  LCK  ++   V +   + GK   P V+   +L+  + + +  E G+ ++  ML  
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  A S +V    K   +E AL + + ++  G S N FVY   I + C+  K  EA
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   M   GL+P D T+++LI+   +  +++ +LS+  +M+   L  S   +N +I  
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G+   A G +   ++K   P  +TY+ L+GGY  +G+I + L+LY+EM  K I+P+
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  +T+L+S L + G + +A K F  M   ++ P    Y  ++  + E+G+ +KA    +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566

Query: 363 EMVSEGLKPST 373
           EM  +G+ P T
Sbjct: 567 EMTEKGIVPDT 577



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 172/364 (47%), Gaps = 2/364 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + L  +     ++++ TL++ + K    ++   +   ML     P+EA + +L+ 
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K G+++  ++++ R+     SP + V  +LI  + +  +  E  +L  RM +  +  
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + YS+++    +   L++AL    EM+  G   + + Y + I  +C++G I  A   M
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460

Query: 187 QEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM N  L+P   T+  L+ G C+K K I ++L    +M  + + PS   F  ++  L  
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGK-INKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  + A  +     +    PN +TY+ +I GY +EG++ +  +   EM  K I P   +
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  LI  LC  G+  EA  +   +   +       Y  L+     +G   +AL +C+EMV
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639

Query: 366 SEGL 369
             G+
Sbjct: 640 QRGV 643



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 162/336 (48%), Gaps = 6/336 (1%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRTLISALC 69
           ++E  G  ++++ +N LI  + K  +   VW    I + +      P+  T  TL+  LC
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQK---VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K  + +  ++M+D +   R SP     +SL+  + +  +IEE + L+KR++   +  +  
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++ +  K R    A ++++ M K G   N   Y+  I  +C  GK++ A   + EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            + GLK     +N LI G  K   I  +  +  +M+++KL P+   +  ++   C  G  
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +      KG +P+  T++ L+ G  + G I++ +KL+ EM   ++ P    Y  +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           I   C+ G + +A ++ K M    +VP    Y  L+
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 159/350 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++N +I    +       +   + M E    P+  + R LI  LC  GQ       +D 
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +H   C    I  T L+    +E ++EE + + + M+++ +  D + Y +++   +K ++
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            +    + +EM  RG   +  +YT+ I A  + G  +EA  +   M N G  P + T+  
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I G  KA  + E+   C +M     +P+   +   +  L +     Q    L  A+ KG
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG 782

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              N  TY+ LI G+ ++G I+E  +L   M    +SP    YT++I+ LC+   +++A 
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + +  M    + P    Y +L+      G   KA  L  EM+ +GL P+ 
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 157/348 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           + + L+H + K     L   ++  M+     P+      +I +LC+   L    +M+  +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C   ++    LI  + +++++ E + + K +  K++  D + Y  +VY   K++  
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E  L + +EML   FS +    ++ +    + GKIEEA  L++ + + G+ P    +N L
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   K ++  E+    ++M    L P+   ++ +I   C  G    A   L   +D G 
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             +   Y+ LI G+ K G+I        EM  K + PT+  YTSL+   C  GK+ +A +
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  M    + P +  + +L+      G    A+ L  EM    +KP+
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 1/276 (0%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
           LI   ++  R+ +G+++ K M+ K +++ +    S +++  VK R+   A+ ++ +M+  
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   + ++YT  I + CE   +  A  ++  ME  G       +N+LI+G  K +++ E+
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   + +  + L P    +  ++  LC+    +    M+   L   FSP+E   S L+ G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             K G+I+E L L   +    +SP L  Y +LI SLC+  K  EA+  F  M    L P 
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              Y  L+ +   +G    AL    EMV  GLK S 
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 156/386 (40%), Gaps = 35/386 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ +L+       + +   R+Y  M      P+  T  TL+S L + G ++  V + 
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +      P  +    +I    +E  + +    LK M  K ++ DT +Y  +++     
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A V  + + K     N   YT  +  +C  GK+EEA  + QEM   G+      +
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            +LI+G  K K  +      ++M  R L P    +  MI    + G+ K+A G+  L ++
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP-------------------- 301
           +G  PNE+TY+ +I G  K G + E   L  +M+  S  P                    
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770

Query: 302 ---------------TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
                              Y  LI   C+ G++EEA +    M    + P    Y +++ 
Sbjct: 771 KAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
               + +  KA+ L   M  +G++P 
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPD 856



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 2/268 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  VC+ + QRG  L L+ +  LI    K     L + + + M +    P++    +
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I A  K G  +    + D +  + C P  +  T++I  + +   + E  VL  +M   +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747

Query: 124 MIHDTIAYSLIVYAKVKMR-NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            + + + Y   +    K   +++ A+ ++  +LK G  AN+  Y   I  +C  G+IEEA
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEA 806

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L+  M   G+ P   T+  +I    +   +++++     M  + + P   A+N +I  
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEIT 270
            C  G   +A  +    L +G  PN  T
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/336 (21%), Positives = 136/336 (40%), Gaps = 34/336 (10%)

Query: 69  CKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEE-----------GMVLL 116
           C+  + + +VD + RI  GKR S  + +++ L+ R ++   +EE           G+   
Sbjct: 33  CRIAEDKQFVDAVKRIVRGKR-SWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFF 91

Query: 117 KRM-LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY-- 173
             + L +   H T ++ ++++A VK  NL        + L       S V+      Y  
Sbjct: 92  NFLGLHRGFDHSTASFCILIHALVKA-NLFWPASSLLQTLLLRALKPSDVFNVLFSCYEK 150

Query: 174 CEYGKIEEANCLMQE-----------------MENAGLKPYDETFNLLIEGCAKAKRIEE 216
           C+       + L+Q                  +    L P   T + L+ G  K +    
Sbjct: 151 CKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGL 210

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           ++     M+S  + P    +  +IR LCE  +  +A  M+      G   N + Y+ LI 
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G  K+ ++ E + +  ++  K + P +  Y +L+  LC+  + E   +    M      P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 SLV    ++G   +AL+L + +V  G+ P+
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 119/306 (38%), Gaps = 47/306 (15%)

Query: 96  NTSLILRIIQEE-RIEEGMVLL---KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
           N S ++   QEE RI E    +   KR++R     +    S +V  ++K  ++E  L+  
Sbjct: 21  NVSSVIDSAQEECRIAEDKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGT 80

Query: 152 EE------------MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
            +             L RGF  ++  +   I A  +      A+ L+Q +    LKP D 
Sbjct: 81  IDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSD- 139

Query: 200 TFNLLI---EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
            FN+L    E C  +      L     + SR++L     F  MI ++             
Sbjct: 140 VFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKV------------- 186

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                    P   T S L+ G  K       ++L+ +M    I P +  YT +I SLC+ 
Sbjct: 187 ------SLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCEL 240

Query: 317 GKLEEADKYFKIMKSHSLVPGVDI----YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L  A    K M +H    G D+    Y  L+    +K    +A+ + +++  + LKP 
Sbjct: 241 KDLSRA----KEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPD 296

Query: 373 TSYLCS 378
               C+
Sbjct: 297 VVTYCT 302


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 176/369 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA ++   + + G    +IS+NTLI+ +  S   ++   +++ M +N   PN  T  T+
Sbjct: 180 KVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTI 239

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +LCK   +   +D L  + G+   P  I   S++  +    ++ E   L KRM +   
Sbjct: 240 IDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGC 299

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y++I+ +  K R +  A     EM+ +G   +   YTT +   C  G++ EA  
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L ++ME  G KP    +N +I+   K + + +++ +  +M+ R + P+   ++ ++   C
Sbjct: 360 LFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFC 419

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A  +    + +   PN +T+S L+ G  +EG + E   ++  M  K + P + 
Sbjct: 420 NLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIY 479

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +L++  C   K+ EA K F+IM      P +  Y  L+  +       KA  L  +M
Sbjct: 480 TYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQM 539

Query: 365 VSEGLKPST 373
             + L P+T
Sbjct: 540 SVKKLTPNT 548



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 173/360 (48%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + +EQ G    ++++N +I  + K    +        M++    P+  T  T++  LC  
Sbjct: 292 KRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYL 351

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           GQL   + +  ++  K C P V+   ++I  + ++  + + M  L  M+ + +  + + Y
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTY 411

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S I++    +  L+ A  +++EM+ R    N+  ++  +   C+ G + EA  + + M  
Sbjct: 412 STILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTE 471

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G++P   T+N L+ G     ++ E+    E M+ +   P   ++N +I   C      +
Sbjct: 472 KGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDK 531

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +LT    K  +PN +TY+ ++ G    G + +  +L+ +M    + PTL  Y+ L++
Sbjct: 532 AKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN 591

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+ G L+EA K FK MK   L P + +Y  L+      G    A  L  ++ ++G++P
Sbjct: 592 GLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQP 651



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 179/371 (48%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A D    +  RG     I++N+++H +    + +   R+++ M +N   P+  T 
Sbjct: 247 RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I +L K   +    D L  +  +   P V+  T+++  +    ++ E + L K+M +
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K    D +AY+ I+ +  K R +  A+    EM+ RG   N+  Y+T +  +C  G+++E
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L +EM    + P   TF++L++G  +   + E+    E M  + + P+   +N ++ 
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C      +A  +  + + KG +P+  +Y+ LI GY     + +   L  +M  K ++P
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y +++  LC  G+L +A + FK M S  ++P +  Y  L+    + G+  +AL L 
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606

Query: 362 EEMVSEGLKPS 372
           + M  + L+P 
Sbjct: 607 KSMKEKKLEPD 617



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 173/373 (46%), Gaps = 2/373 (0%)

Query: 2   RLFEVAFDVCRY--LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           RL  V F V  +  + + G    +I+F TLI+ V    +  +   +Y  M+ +   P+  
Sbjct: 140 RLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVI 199

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           +  TLI+ LC  G     V +  ++    C P V+   ++I  + ++  + + M  L  M
Sbjct: 200 SYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM 259

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           + + +  D I Y+ IV+    +  L  A  +++ M + G   +   Y   I +  +   +
Sbjct: 260 VGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLV 319

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            +A   + EM + G+ P   T+  ++ G     ++ E++   ++M  +   P   A+N +
Sbjct: 320 NDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTI 379

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+      A   L+  +D+G  PN +TYS ++ G+   G++ E  +L+ EM  +++
Sbjct: 380 IDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV 439

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    ++ L+  LCQ G + EA   F+ M    + P +  Y +L+  +  +    +A  
Sbjct: 440 MPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARK 499

Query: 360 LCEEMVSEGLKPS 372
           + E MV +G  P 
Sbjct: 500 VFEIMVGKGCAPD 512



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 176/372 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +     +C  ++  G + ++ S N LI+ + + +  D    ++  M +    P+  T
Sbjct: 106 MKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVIT 165

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI+ +C  G+++  V++ + +      P VI   +LI  +         + + K+M 
Sbjct: 166 FTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKME 225

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +     + + Y+ I+ +  K R +  A+    EM+ RG   ++  Y + +   C  G++ 
Sbjct: 226 QNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLN 285

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L + ME  G KP   T+N++I+   K + + ++  +  +M+ + + P    +  ++
Sbjct: 286 EATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTIL 345

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G   +A  +      KG  P+ + Y+ +I    K+  + + ++   EM  + I 
Sbjct: 346 HGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIP 405

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y++++   C  G+L+EA + FK M   +++P    +  LV    ++G  ++A  +
Sbjct: 406 PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWV 465

Query: 361 CEEMVSEGLKPS 372
            E M  +G++P+
Sbjct: 466 FETMTEKGVEPN 477



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 170/359 (47%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A D    +  +G    ++++ T++H +    + +   R+++ M +    P+    
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAY 376

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I +LCK   +   ++ L  +  +   P  +  ++++       +++E   L K M+ 
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVG 436

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +N++ +T+ +S++V    +   +  A  V+E M ++G   N + Y   +  YC   K+ E
Sbjct: 437 RNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNE 496

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + + M   G  P   ++N+LI G   ++R++++ +   QM  +KL P+   +N +++
Sbjct: 497 ARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMK 556

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC  G    A  +       G  P  +TYS L+ G  K G + E LKL+  M+ K + P
Sbjct: 557 GLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEP 616

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            +  YT LI  +   GKLE A   F  + +  + P    Y  ++   L++G   +A  L
Sbjct: 617 DIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 110/264 (41%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ +    RM R N     + +   + +  KM+   + + +  +M   G +   +    
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C    ++ A  +  +M   G++P   TF  LI G     +I+ ++    +M+   
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P   ++N +I  LC  GN   A  +       G  PN +TY+ +I    K+  + + +
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
               EM  + I P    Y S++  LC  G+L EA + FK M+ +   P V  Y  ++   
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            +      A     EMV +G+ P 
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPD 337



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 131/290 (45%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A +    +  RG   + ++++T++H      + D   ++++ M+     PN  T 
Sbjct: 387 RLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTF 446

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  LC+ G +     + + +  K   P +    +L+       ++ E   + + M+ 
Sbjct: 447 SILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVG 506

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K    D  +Y++++      R ++ A  +  +M  +  + N+  Y T +   C  G++ +
Sbjct: 507 KGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLD 566

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L ++M ++G+ P   T+++L+ G  K   ++E+L   + M  +KL P    +  +I 
Sbjct: 567 AQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE 626

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
            +   G  + A G+ +     G  P   TY+ +I G  KEG   E  +L+
Sbjct: 627 GMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 94/230 (40%)

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           +++ AL  +  M +     +   +  F+G+  +  +      L  +M+  G+     + N
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +LI    +   ++ ++S   +M    + P    F  +I  +C  G  K A  +    +  
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P+ I+Y+ LI G    G     + ++ +ME     P +  Y ++I SLC+   + +A
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +   M    + P    Y S+V      G   +A  L + M   G KP 
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 174/365 (47%), Gaps = 2/365 (0%)

Query: 13  YLEQRG--FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           Y E RG   +  ++SF+ LI + T+    D      + M E    P+      +I   C+
Sbjct: 287 YKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCR 346

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G +   + + D +    C P V+   +L+  + +E R+ +   LL  M  + +  D   
Sbjct: 347 AGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCT 406

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ +++   +  N+E AL  ++ +  +    +   Y T I   C  G + +AN L  +M 
Sbjct: 407 FTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMH 466

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           +  + P   T+++LI+   +  +++ + ++ ++M+++ ++P+   +N +I+  C  GN  
Sbjct: 467 SREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVS 526

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +    L         P+ ITY+ LI GY KEG++ E   L   ME +++ P    Y  +I
Sbjct: 527 KGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S     G ++EAD  +K M +  + P    Y S++  H+  GN  K+  L +EM+ +GL 
Sbjct: 587 SGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLA 646

Query: 371 PSTSY 375
           P   +
Sbjct: 647 PDDKF 651



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 177/368 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +  +G    L+++N+++  + ++ R D    +++ M      P+  +   L
Sbjct: 211 EAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNML 270

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G+L+  +     + G+R +P V+  + LI    +   ++     L+ M    +
Sbjct: 271 IGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGL 330

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + Y++++    +   +  AL V +EM+  G   +   Y T +   C+  ++ +A  
Sbjct: 331 MPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEE 390

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM+  G+ P   TF  LI G  +   IE++L + + +  ++L P    +N +I  +C
Sbjct: 391 LLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMC 450

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+  +AN +      +   PN +TYS LI  + ++G++        EM  K I P + 
Sbjct: 451 RQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIM 510

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y S+I   C+ G + +  ++   M+   ++P +  Y +L+  ++++G   +A +L + M
Sbjct: 511 TYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIM 570

Query: 365 VSEGLKPS 372
            +E ++P 
Sbjct: 571 ENENVQPD 578



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 171/348 (49%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           + N ++H   K+ +   V  +   M +   +P+  T   ++ A  + G ++  + ++D +
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K   P ++   S++  +++  R ++   + + M    +  D  ++++++    +   L
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E AL  Y+EM  R  + +   ++  IG +   G+++ A   ++EM   GL P    + ++
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  +A  + E+L   ++M++   LP    +N ++  LC+      A  +L    ++G 
Sbjct: 341 IGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  T++ LI GY ++G I++ L+ +  +  + + P +  Y +LI  +C+ G L +A++
Sbjct: 401 PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANE 460

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  M S  + P    Y  L+  H EKG    A    +EMV++G+ P+
Sbjct: 461 LWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPN 508



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/218 (17%), Positives = 86/218 (39%), Gaps = 36/218 (16%)

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL------------------LPSCSA-- 235
           P  + F+LLI    ++++  E+      ++  ++                   P  +A  
Sbjct: 87  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADA 146

Query: 236 ---------------FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                           N M+   C+     + + +++    +   P+ +T++ ++    +
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G+++  + L   M  K I P L  Y S++  L + G+ ++A + F+ M +  + P V  
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYLC 377
           +  L+G     G   +AL   +EM    + P   S+ C
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSC 304


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 177/368 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A +    +E  G    ++++N L +           W++ Q ML N   P+  T   L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G ++    + +++  +     ++  T L+  + +  RI+E ++LL  M    +
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + YS++++   K   +E A+ +YEEM  +    NSFV +  I    E G I EA  
Sbjct: 442 KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 501

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               +  + +      +N++I+G AK   I E++   +Q++ + + P+   FN +I   C
Sbjct: 502 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   +A  +L      G  P  +TY+ L+ GY +EG++  +  + +EME K+I PT  
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT ++  LC+ G+L E+ +  K M +  L P    Y +++    +  +  KA  L  +M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 365 VSEGLKPS 372
           +   L+PS
Sbjct: 682 LQHSLQPS 689



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 184/369 (49%), Gaps = 2/369 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRT 63
           E +F +   +  +G  LS++++  L+  + KS R D    I  H +E I   P+  T   
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA-VILLHEMEVIGLKPDLLTYSV 450

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LCK G ++  +++ + +  KR  P   V +++I  + ++  I E  +    + + +
Sbjct: 451 LIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 510

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I Y++++    K+ N+  A+  Y++++++G S     + + I  +C+ GK+ EA 
Sbjct: 511 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 570

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  ++  GL P   T+  L+ G  +   +        +M ++ + P+   +  +++ L
Sbjct: 571 KLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 630

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   ++  +L     +G  P++ITY+ +I  + K  ++Q+  +L+ +M   S+ P+ 
Sbjct: 631 CKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSP 690

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI+ LC  G L++AD+    ++  S+      Y +++  H  KG+   AL    +
Sbjct: 691 VTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQ 750

Query: 364 MVSEGLKPS 372
           MV  G + S
Sbjct: 751 MVERGFEVS 759



 Score =  130 bits (327), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 179/422 (42%), Gaps = 73/422 (17%)

Query: 21  LSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           +S+ ++N+L++ +  +D   ++W +Y  +  +    NE T   LI  LC+  +LQ  V  
Sbjct: 201 VSIATYNSLLYNLRHTD---IMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTF 257

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L    G+   P V+   +L+    +   ++        M++  ++ D  +Y+++++    
Sbjct: 258 LRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCV 317

Query: 141 MRNLESAL-----------------------------------VVYEEMLKRGFSANSFV 165
             ++E AL                                    V + ML  G + +   
Sbjct: 318 AGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVT 377

Query: 166 YTTFIGAYCEYGKIE-----------------------------------EANCLMQEME 190
           YT  I  +C+ G IE                                   EA  L+ EME
Sbjct: 378 YTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             GLKP   T+++LI G  K   +EE++   E+M S+++ P+    + +I  L E G   
Sbjct: 438 VIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS 497

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A            +   I Y+ +I GYAK G I E ++ Y ++  K ISPT+  + SLI
Sbjct: 498 EAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 557

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+ GKL EA K    +K H LVP    Y +L+  + E+G+      +  EM ++ +K
Sbjct: 558 YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK 617

Query: 371 PS 372
           P+
Sbjct: 618 PT 619



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 133/280 (47%), Gaps = 2/280 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G S ++++FN+LI+   K  +     ++   +  +   P   T  TL++  C+ G + 
Sbjct: 543 EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 602

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           +  DML  +  K   P  I  T ++  + +E R+ E + LLK M  + +  D I Y+ ++
Sbjct: 603 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 662

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +  K  +L+ A  ++ +ML+     +   Y   I   C YG +++A+ L+  +++  ++
Sbjct: 663 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 722

Query: 196 PYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                +  +I+  CAK   ++ +L +  QM+ R    S   ++ +I RLC+      A  
Sbjct: 723 LTKVAYTTIIKAHCAKGD-VQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKF 781

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
              + L  G  P++     ++  + + G+   V +++  M
Sbjct: 782 FFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMM 821



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 176/408 (43%), Gaps = 60/408 (14%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FD+ R   + GF  S +S+  + HVV +  ++  + R+   M+E     +  ++  L+  
Sbjct: 102 FDLLR--NEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCN 159

Query: 68  LCKGGQLQTYV-DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             +   L   V DML   + +                   E + + + +L +M   N+  
Sbjct: 160 SFRDWDLNNVVWDMLACAYSR------------------AEMVHDALFVLAKMKVLNLQV 201

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ ++Y    +R+ +    VY E+   G   N +     I   C   ++++A   +
Sbjct: 202 SIATYNSLLY---NLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFL 258

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E       P   +FN L+ G  K   ++ + S+   M+   LLP   ++N ++  LC  
Sbjct: 259 RETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVA 318

Query: 247 GNAKQA-----------------------NGMLTLALD------------KGFSPNEITY 271
           G+ ++A                       NG   L L              G +P+ +TY
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI G+ + G I+E  KL  +M  + +  ++  YT L+SSLC+ G+++EA      M+ 
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEV 438

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
             L P +  Y  L+    ++G   +A+ L EEM S+ + P+ S++CSA
Sbjct: 439 IGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN-SFVCSA 485



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/224 (19%), Positives = 97/224 (43%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FD+   +E +    + I++  ++  + K  R     ++ ++M     +P++ T  T+I +
Sbjct: 605 FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQS 664

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK   LQ    + +++      P  +    LI  +     +++   LL  +  +++   
Sbjct: 665 FCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLT 724

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            +AY+ I+ A     ++++ALV + +M++RGF  +   Y+  I   C+   I +A     
Sbjct: 725 KVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFC 784

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
            M   G+ P  +   +++    ++            M+   LLP
Sbjct: 785 MMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 170/341 (49%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            ++ +LI    K+      W++   ML+     N  T   L+  LCK G++    ++   
Sbjct: 371 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 430

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +     SP   V T+L+   I+ ER+E+ M +LK+M   N+  D I Y  I++     R 
Sbjct: 431 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 490

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           LE   ++ EEM  RG SAN  + TT I AY + GK  +A    QEM++ G++    T+ +
Sbjct: 491 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 550

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  +A  +E ++ Y  +M+S  L P+ + +  +I  LC     + A  +      +G
Sbjct: 551 LIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRG 610

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +P+   ++ LI G  K G +QE L L   M   +I   L  YTSL+S   QCG+L +A 
Sbjct: 611 MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQAR 670

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           K+F  M    ++P   +   L+  + ++G   +A+ L  EM
Sbjct: 671 KFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 159/353 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S N L+H ++KS    LV + +  M+     P+  T   +I  LCK G L+    +  ++
Sbjct: 197 SCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQM 256

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                SP V+   SLI    +   +EE   L   M     + D I Y+ ++    K   +
Sbjct: 257 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKM 316

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A   + EM   G   N   Y+T I A+C+ G ++ A  L+ +M   GL P + T+  L
Sbjct: 317 PRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSL 376

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   KA  + E+      M+   +  +   +  ++  LC+ G   +A  +    L  G 
Sbjct: 377 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 436

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           SPN+  Y+ L+ GY K   +++ +K+  +M   +I P L  Y S+I   C   KLEE   
Sbjct: 437 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 496

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
             + MKS  +     I  +++  + + G  + AL+  +EM   G++ +    C
Sbjct: 497 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 549



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 161/361 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G S  ++++N+LI    K    + V  ++  M +    P+  T   LI+  CK  +
Sbjct: 256 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 315

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    +    +      P V+  ++LI    +E  ++  + LL  M R  ++ +   Y+ 
Sbjct: 316 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTS 375

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K  NL  A  +  +ML+ G   N   YT  +   C+ G++ EA  + + M   G
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P  + +  L+ G  KA+R+E+++   +QM    + P    +  +I   C     ++  
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 495

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L     +G S N +  + +I  Y K G+  + L  + EM+   +  T+  Y  LI  L
Sbjct: 496 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 555

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G +E A  YF  M S  L P V +Y SL+           A  L +EM   G+ P  
Sbjct: 556 CEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDI 615

Query: 374 S 374
           +
Sbjct: 616 T 616



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 160/365 (43%), Gaps = 4/365 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I++N LI+   K ++    +  +  M  N   PN  T  TLI A CK G +Q  + +L
Sbjct: 299 DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLL 358

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +      P     TSLI    +   + E   LL  ML+  +  + + Y+ ++    K 
Sbjct: 359 XDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 418

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A  V+  MLK G S N  VYT  +  Y +  ++E+A  ++++M    +KP    +
Sbjct: 419 GRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILY 478

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I G    +++EE+    E+M SR +  +      +I    + G +  A        D
Sbjct: 479 GSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQD 538

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G     +TY  LI G  + G ++  +  +  M    + P +  YTSLI  LC    +E 
Sbjct: 539 VGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIES 598

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM----VSEGLKPSTSYLC 377
           A K F  M+   + P +  + +L+  +L+ GN  +AL L   M    +   L   TS + 
Sbjct: 599 AKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVS 658

Query: 378 SASTC 382
             S C
Sbjct: 659 GFSQC 663



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 1/324 (0%)

Query: 50  LENIR-YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           + N R  P   +   L+  L K G  Q      + + G   +P V     +I  + +E  
Sbjct: 186 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 245

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E    L  +M    +  D + Y+ ++    K+ +LE    ++ EM   G   +   Y  
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  YC++ K+  A     EM+N GLKP   T++ LI+   K   ++ ++     M    
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           LLP+   +  +I   C+ GN  +A  +L   L  G   N +TY+ L+ G  K G + E  
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +++  M    ISP    YT+L+    +  ++E+A K  K M   ++ P + +Y S++  H
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 485

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
             +    +   + EEM S G+  +
Sbjct: 486 CSQRKLEETKLILEEMKSRGISAN 509



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%)

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
           + S V+      + E G +EEAN     M N    P   + N L+   +K+   +    +
Sbjct: 158 SGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKF 217

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
              M+   + PS   +N MI  LC+ G+ + +  +     + G SP+ +TY+ LI GY K
Sbjct: 218 FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGK 277

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G ++EV  L+ EM+     P +  Y  LI+  C+  K+  A +YF  MK++ L P V  
Sbjct: 278 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 337

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           Y +L+    ++G    A+ L  +M   GL P+
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPN 369



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 136/334 (40%), Gaps = 35/334 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   + Q G  L+++++  L+  + K+ R      +++ ML++   PN+     L+ 
Sbjct: 389 AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 448

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K  +++  + +L ++      P +I+  S+I     + ++EE  ++L+ M  + +  
Sbjct: 449 GYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISA 508

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEM-------------------------------- 154
           + +  + I+ A  K      AL  ++EM                                
Sbjct: 509 NPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYF 568

Query: 155 ---LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
              L  G   N  VYT+ I   C    IE A  L  EM+  G+ P    F  LI+G  K 
Sbjct: 569 CRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 628

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             ++E+L    +M    +      +  ++    +CG   QA       ++KG  P E+  
Sbjct: 629 GNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLC 688

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             L+  Y K G++ E ++L  EME  + S    A
Sbjct: 689 ICLLREYYKRGQLDEAIELKNEMERMAYSFEFDA 722


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 179/359 (49%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +AF     + + G+  + I+F+TLI+ +    R      +   M+E    P+  TI TL+
Sbjct: 239 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 298

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LC  G+    + ++D++    C P  +    ++  + +  +    M LL++M  +N+ 
Sbjct: 299 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 358

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + YS+I+    K  +L++A  ++ EM  +G + N   Y   IG +C  G+ ++   L
Sbjct: 359 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 418

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++M    + P   TF++LI+   K  ++ E+    ++M+ R + P    +  +I   C+
Sbjct: 419 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 478

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             +  +AN M+ L + KG  PN  T++ LI GY K   I + L+L+ +M  + +      
Sbjct: 479 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 538

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           Y +LI   C+ GKL  A + F+ M S  + P +  Y+ L+    + G   KAL + E++
Sbjct: 539 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 174/350 (49%), Gaps = 2/350 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           +++  +++V+ KS +  L   + + M E NI+  +      +I  LCK G L    ++ +
Sbjct: 327 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKHGSLDNAFNLFN 385

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +  K  +  +I    LI       R ++G  LL+ M+++ +  + + +S+++ + VK  
Sbjct: 386 EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG 445

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            L  A  +++EM+ RG + ++  YT+ I  +C+   +++AN ++  M + G  P   TFN
Sbjct: 446 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 505

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +LI G  KA RI++ L    +M  R ++     +N +I+  CE G    A  +    + +
Sbjct: 506 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 565

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              PN +TY  L+ G    GE ++ L+++ ++E   +   +  Y  +I  +C   K+++A
Sbjct: 566 KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 625

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              F  +    + PGV  Y  ++G   +KG  ++A  L  +M  +G  P 
Sbjct: 626 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 675



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 175/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++   +C+ +E +G + +L + + +I+   +  +  L +     +++    PN  T  T
Sbjct: 202 YDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFST 261

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G++   ++++DR+      P +I   +L+  +    +  E M+L+ +M+   
Sbjct: 262 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 321

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y  ++    K      A+ +  +M +R    ++  Y+  I   C++G ++ A 
Sbjct: 322 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 381

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EME  G+     T+N+LI G   A R ++       M+ RK+ P+   F+ +I   
Sbjct: 382 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 441

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A  +    + +G +P+ ITY+ LI G+ KE  + +  ++   M  K   P +
Sbjct: 442 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 501

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  LI+  C+  ++++  + F+ M    +V     Y +L+    E G    A  L +E
Sbjct: 502 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 561

Query: 364 MVSEGLKPS 372
           MVS  + P+
Sbjct: 562 MVSRKVPPN 570



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 168/373 (45%), Gaps = 4/373 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +E +G + ++I++N LI     + R D   ++ + M++    PN  T   LI 
Sbjct: 380 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 439

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +  K G+L+   ++   +  +  +P  I  TSLI    +E  +++   ++  M+ K    
Sbjct: 440 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 499

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   +++++    K   ++  L ++ +M  RG  A++  Y T I  +CE GK+  A  L 
Sbjct: 500 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 559

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM +  + P   T+ +L++G       E++L   E++   K+      +N +I  +C  
Sbjct: 560 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 619

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                A  +      KG  P   TY+ +IGG  K+G + E   L+ +ME    +P    Y
Sbjct: 620 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 679

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSL-VPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             LI +    G   ++ K  + +K     V    I   +  +  +K N     H C +  
Sbjct: 680 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKANYFSKYHNCSKST 739

Query: 366 S---EGLKPSTSY 375
           S   +  KPS S+
Sbjct: 740 SFWNQPEKPSDSW 752



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 166/353 (47%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           ++I F+ L   + K+ + DLV  + + M L+ I + N  T+  +I+  C+  +L      
Sbjct: 185 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFSA 243

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           + +I      P  I  ++LI  +  E R+ E + L+ RM+      D I  + +V     
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A+++ ++M++ G   N+  Y   +   C+ G+   A  L+++ME   +K     
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++++I+G  K   ++ + +   +M  + +  +   +N +I   C  G       +L   +
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +  +PN +T+S LI  + KEG+++E  +L+ EM ++ I+P    YTSLI   C+   L+
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +A++   +M S    P +  +  L+  + +       L L  +M   G+   T
Sbjct: 484 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 536



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 1/292 (0%)

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D IH  R  P VI  + L   I + ++ +  + L K+M  K + H+    S+++    + 
Sbjct: 176 DMIH-SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 234

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           R L  A     +++K G+  N+  ++T I   C  G++ EA  L+  M   G KP   T 
Sbjct: 235 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 294

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L+ G   + +  E++   ++M+     P+   +  ++  +C+ G    A  +L    +
Sbjct: 295 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 354

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +    + + YS +I G  K G +     L+ EME K I+  +  Y  LI   C  G+ ++
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 414

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             K  + M    + P V  +  L+   +++G   +A  L +EM+  G+ P T
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 191/408 (46%), Gaps = 36/408 (8%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           +L E + D  + +  +G S S  SFN  + ++ KS   D  W  +   L   ++ +  + 
Sbjct: 52  QLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSF 110

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              I A C+ G +    ++L ++     SP V + T LI    +   I++  V+  RM  
Sbjct: 111 GITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDD 170

Query: 122 KNMIHDTIAYSLIV---------------YAKVKM--------------------RNLES 146
             +  +   Y++++               Y K+K+                      L  
Sbjct: 171 LGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSL 230

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A  V++E+ KRG + N+  Y   IG  C  G++ +A  L++ M+ A + P   TFN+L++
Sbjct: 231 AFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMD 290

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G     +++++LSY E++    L P+   +N +I    + GN+   + ++    D+G SP
Sbjct: 291 GLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP 350

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +++TY+ L+  + +  +I++  ++++ M+   + P    Y  LI  LC  G + EA K +
Sbjct: 351 SKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLY 410

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           K M    L P   IY +++  + ++ N  KAL   EEMV  G+ P+ +
Sbjct: 411 KSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVA 458



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 134/294 (45%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           + +YQ M      PN  T  +LI+  C+ G+L     + D I  +  +   +    LI  
Sbjct: 197 FELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGG 256

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           + ++ ++ +   LL+RM R ++   T  +++++        L+ AL   E++   G    
Sbjct: 257 LCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPT 316

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y   I  + + G     + L++EME+ G+ P   T+ +L+    ++  IE++     
Sbjct: 317 LVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFH 376

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            M    L+P    +  +I  LC  GN  +A+ +    ++    PN++ Y+ +I GY KE 
Sbjct: 377 LMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKEC 436

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              + LK   EM    ++P + +Y S I  LC+ GK  EA +  K M    L P
Sbjct: 437 NSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 43/281 (15%)

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
           ++N S      Q + +E+ +   K M+ K     + +++  +    K  NL+     + E
Sbjct: 44  VINASF-----QSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTE 98

Query: 154 MLKRG-FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
            L R  F   SF  T  I A+CE G + +   L+ +ME  G+ P    + +LIE C    
Sbjct: 99  YLGRTQFDVYSFGIT--IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEAC---- 152

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
                                          C  G+  QA  M +   D G + N+  Y+
Sbjct: 153 -------------------------------CRNGDIDQAKVMFSRMDDLGLAANQYIYT 181

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            +I G+ K+G  ++  +LY +M+   + P L  Y SLI+  C+ GKL  A K F  +   
Sbjct: 182 IMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKR 241

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +      Y  L+G    KG  +KA  L E M    + P+T
Sbjct: 242 GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTT 282



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 35/191 (18%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           V  ++ R +E RG S S +++  L++   +SD  +  + ++  M      P++ T   LI
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLI 394

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LC  G +                                    E   L K M+  ++ 
Sbjct: 395 HGLCIKGNMV-----------------------------------EASKLYKSMVEMHLQ 419

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + + Y+ ++    K  N   AL   EEM+K G + N   Y + I   C+ GK  EA  L
Sbjct: 420 PNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRL 479

Query: 186 MQEMENAGLKP 196
           ++EM  AGLKP
Sbjct: 480 LKEMTEAGLKP 490


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 165/349 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            S+N +I  + ++ R      ++  M E    PN  T  T+I    KGG L+    + D+
Sbjct: 64  FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 123

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P  I    L+  + +  R+ E   LL  M  + M+ D   YS++     +  +
Sbjct: 124 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 183

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            ++ L ++ + LK G +   +  +  +   C+ GK+  A  ++Q + NAGL P    +N 
Sbjct: 184 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 243

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  +   +E + S   QM SR + P    +N +I  LC+      A  +L    D G
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 303

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +P   T++ LI  Y + G++++   +  EM+   + P + +Y S++++ C+ GK+ EA 
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                M    ++P   +Y +++  ++E G   +A  L E+M S G+ PS
Sbjct: 364 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 412



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/401 (21%), Positives = 170/401 (42%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + +R    + I++NT+I    K    +  +R+   M+ +   PN  T   L+S
Sbjct: 82  AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 141

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNT----------------------------- 97
            LC+ G++     +LD +  ++  P     +                             
Sbjct: 142 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 201

Query: 98  -----SLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                S++L  + ++ ++     +L+ ++   ++   + Y+ ++    +   LE A   +
Sbjct: 202 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 261

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            +M  R    +   Y   I   C+  +I  A  L+ EM++ G+ P  ETFN LI+   + 
Sbjct: 262 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 321

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            ++E+      +M    L P+  ++  ++   C+ G   +A  +L     K   PN   Y
Sbjct: 322 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 381

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I  Y + G   +   L  +M+   ISP++  Y  LI  LC   ++ EA++    + +
Sbjct: 382 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 441

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           H L+P    Y +L+     +GN  KAL L + M   G+K +
Sbjct: 442 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 482



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 168/357 (47%), Gaps = 3/357 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           +YL + G ++   + + L++ + K  +  +   + Q ++     P      TLI+  C+ 
Sbjct: 193 KYL-KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 251

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-A 130
           G+L+       ++  +   P  I   +LI  + + ERI     LL  M + N ++ T+  
Sbjct: 252 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDNGVNPTVET 310

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ ++ A  +   LE   +V  EM + G   N   Y + + A+C+ GKI EA  ++ +M 
Sbjct: 311 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 370

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           +  + P  + +N +I+   +    +++    E+M S  + PS   +N +I+ LC      
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  ++    +    P+ ++Y+ LI      G I + L L   M    I  T+  Y  LI
Sbjct: 431 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 490

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           S L   G+L E +  ++ M  +++VP   I+  +V  + + GN+ KA  L +EM+ +
Sbjct: 491 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 149/324 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A +V + L   G   + + +NTLI+   ++   +  +  +  M      P+  T   LI
Sbjct: 221 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 280

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK  ++    D+L  +     +P V    +LI    +  ++E+  ++L  M    + 
Sbjct: 281 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 340

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + ++Y  IV A  K   +  A+ + ++M  +    N+ VY   I AY E+G  ++A  L
Sbjct: 341 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 400

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++M++ G+ P   T+NLLI+G     +I E+      + + +L+P   ++N +I   C 
Sbjct: 401 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 460

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN  +A  +       G      TY  LI G    G + E+  LY +M   ++ P+   
Sbjct: 461 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 520

Query: 306 YTSLISSLCQCGKLEEADKYFKIM 329
           +  ++ +  + G   +A+   K M
Sbjct: 521 HNIMVEAYSKYGNEIKAEDLRKEM 544



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 159/351 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            +++ L   ++++  +  +  ++   L+N     + T   L++ LCK G++    ++L  
Sbjct: 169 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 228

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P  ++  +LI    Q   +E       +M  +++  D I Y+ ++    K   
Sbjct: 229 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 288

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           + +A  +  EM   G +     + T I AY   G++E+   ++ EM+  GLKP   ++  
Sbjct: 289 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 348

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++    K  +I E+++  + M  + +LP+   +N +I    E G   QA  ++      G
Sbjct: 349 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 408

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+ +TY+ LI G   + +I E  ++   +    + P   +Y +LIS+ C  G +++A 
Sbjct: 409 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 468

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              + M  + +   V  Y  L+      G   +  +L ++M+   + PS +
Sbjct: 469 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 519



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 1/263 (0%)

Query: 111 EGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           E + +L+RM R      +  +Y++++    +      A+ V++EM +R    N   Y T 
Sbjct: 45  EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 104

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  + + G +E    L  +M   GLKP   T+N+L+ G  +A R+ E+ +  ++M S+K+
Sbjct: 105 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 164

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           +P    ++ +   L   G++K    +    L  G +  + T S L+ G  K+G++    +
Sbjct: 165 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 224

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           +   +    + PT   Y +LI+  CQ G+LE A   F  MKS  + P    Y +L+    
Sbjct: 225 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 284

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           +      A  L  EM   G+ P+
Sbjct: 285 KAERITNAQDLLMEMQDNGVNPT 307



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 125/291 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF     ++ R      I++N LI+ + K++R      +   M +N   P   T  T
Sbjct: 254 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 313

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A  + GQL+    +L  +      P V+   S++    +  +I E + +L  M  K+
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 373

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   Y+ I+ A V+    + A ++ E+M   G S +   Y   I   C   +I EA 
Sbjct: 374 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 433

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  + N  L P   ++N LI  C     I+++L   ++M    +  +   ++++I  L
Sbjct: 434 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 493

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
              G   +   +    +     P+   ++ ++  Y+K G   +   L  EM
Sbjct: 494 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 4/192 (2%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF--NEMIRRLCEC 246
           + +AG +P    +N  ++ C  A  + E++    + M R   P  +AF  N +I  +   
Sbjct: 18  LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRR-MGRDGAPPPNAFSYNVVIAGMWRA 76

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +     ++   PN ITY+ +I G+ K G+++   +L  +M    + P    Y
Sbjct: 77  GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 136

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+S LC+ G++ E       M S  +VP    Y  L       G+    L L  + + 
Sbjct: 137 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 196

Query: 367 EGLKPSTSYLCS 378
            G+     Y CS
Sbjct: 197 NGVTIG-DYTCS 207


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 172/356 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G + ++ ++N L+  +           + + M      PN  T  TL++A C+ G++   
Sbjct: 152 GVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRA 211

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++D +      P ++   S++  I +  R+E+   +   M+++ +  D ++Y+ +V  
Sbjct: 212 ERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGG 271

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+     AL V+ EM ++G   +   +T+ I   C+ G +E A  L++EM   GL+  
Sbjct: 272 YCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMN 331

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           + TF  LI+G  K   ++++L    +M   ++ PS   +N +I   C  G   +A  ++ 
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVR 391

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG  P+ +TYS ++  Y K G+     +L  +M    + P    Y+SLI  LC+  
Sbjct: 392 EMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +L +A   FK M S  L P    Y SL+  H ++GN  +AL L +EMV  G+ P  
Sbjct: 452 RLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDV 507



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 162/332 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G   +L++FN++++ + K+ R +   +++  M++    P+  +  TL+   CK G 
Sbjct: 218 MREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGC 277

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +   +  K   P V+  TSLI  + +   +E  + L++ M  + +  + I ++ 
Sbjct: 278 SHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTA 337

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L+ AL+   EM +     +   Y   I  YC  G+++EA  L++EME  G
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T++ ++    K      +    +QM+   +LP    ++ +IR LCE      A+
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    +  G  P+E+TY+ LI G+ KEG ++  L L+ EM    + P +  Y+ LI+ L
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +  + +EA +    +     VP    Y++L+
Sbjct: 518 SKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 36/319 (11%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           +P V+   +++L  + +  +         ML   +  +   Y+++V A     + + AL 
Sbjct: 120 APSVLAYNAVLL-ALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V  +M   G   N+  Y T + A+C  G+++ A  L+  M   GLKP   TFN ++ G  
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238

Query: 210 KAKRIE-----------------------------------ESLSYCEQMMSRKLLPSCS 234
           KA R+E                                   E+LS   +M  + ++P   
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            F  +I  +C+ GN ++A G++    ++G   NEIT++ LI G+ K+G + + L    EM
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
               I P++  Y +LI+  C  G+++EA +  + M++  + P V  Y +++  + + G+ 
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418

Query: 355 AKALHLCEEMVSEGLKPST 373
             A  L ++M+  G+ P  
Sbjct: 419 HSAFQLNQQMLENGVLPDA 437



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 183/416 (43%), Gaps = 50/416 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + ++G    +++F +LIHV+ K+   +    + + M E     NE T   LI 
Sbjct: 281 ALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALID 340

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G L   +  +  +   R  P V+   +LI       R++E   L++ M  K +  
Sbjct: 341 GFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKP 400

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS I+ A  K  +  SA  + ++ML+ G   ++  Y++ I   CE  ++ +A+ L 
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLF 460

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M + GL+P + T+  LI+G  K   +E +LS  ++M+   +LP    ++ +I  L + 
Sbjct: 461 KNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKS 520

Query: 247 GNAKQANGML-----------------------------TLALDKGF------------- 264
              K+A  +L                              LAL KGF             
Sbjct: 521 ARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVY 580

Query: 265 --------SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                   + +   YS LI G+ +EG + + L  + +M     +P   +  SLI  L + 
Sbjct: 581 QSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEK 640

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           G + EAD+  + + +   +   +  ++L+ ++L++GN    L +   M  +GL PS
Sbjct: 641 GMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 165/348 (47%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N +I  + ++ R      ++  M E    PN  T  T+I    KGG L+    + D++
Sbjct: 17  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 76

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P  I    L+  + +  R+ E   LL  M  + M+ D   YS++     +  + 
Sbjct: 77  VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 136

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           ++ L ++ + LK G +   +  +  +   C+ GK+  A  ++Q + NAGL P    +N L
Sbjct: 137 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 196

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  +   +E + S   QM SR + P    +N +I  LC+      A  +L    D G 
Sbjct: 197 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 256

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P   T++ LI  Y + G++++   +  EM+   + P + +Y S++++ C+ GK+ EA  
Sbjct: 257 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 316

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               M    ++P   +Y +++  ++E G   +A  L E+M S G+ PS
Sbjct: 317 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 364



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/401 (21%), Positives = 170/401 (42%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + +R    + I++NT+I    K    +  +R+   M+ +   PN  T   L+S
Sbjct: 34  AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 93

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNT----------------------------- 97
            LC+ G++     +LD +  ++  P     +                             
Sbjct: 94  GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 153

Query: 98  -----SLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                S++L  + ++ ++     +L+ ++   ++   + Y+ ++    +   LE A   +
Sbjct: 154 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 213

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            +M  R    +   Y   I   C+  +I  A  L+ EM++ G+ P  ETFN LI+   + 
Sbjct: 214 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 273

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            ++E+      +M    L P+  ++  ++   C+ G   +A  +L     K   PN   Y
Sbjct: 274 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 333

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I  Y + G   +   L  +M+   ISP++  Y  LI  LC   ++ EA++    + +
Sbjct: 334 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 393

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           H L+P    Y +L+     +GN  KAL L + M   G+K +
Sbjct: 394 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 434



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 168/357 (47%), Gaps = 3/357 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           +YL + G ++   + + L++ + K  +  +   + Q ++     P      TLI+  C+ 
Sbjct: 145 KYL-KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 203

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-A 130
           G+L+       ++  +   P  I   +LI  + + ERI     LL  M + N ++ T+  
Sbjct: 204 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDNGVNPTVET 262

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ ++ A  +   LE   +V  EM + G   N   Y + + A+C+ GKI EA  ++ +M 
Sbjct: 263 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           +  + P  + +N +I+   +    +++    E+M S  + PS   +N +I+ LC      
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  ++    +    P+ ++Y+ LI      G I + L L   M    I  T+  Y  LI
Sbjct: 383 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 442

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           S L   G+L E +  ++ M  +++VP   I+  +V  + + GN+ KA  L +EM+ +
Sbjct: 443 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 149/324 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A +V + L   G   + + +NTLI+   ++   +  +  +  M      P+  T   LI
Sbjct: 173 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 232

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK  ++    D+L  +     +P V    +LI    +  ++E+  ++L  M    + 
Sbjct: 233 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 292

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + ++Y  IV A  K   +  A+ + ++M  +    N+ VY   I AY E+G  ++A  L
Sbjct: 293 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 352

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++M++ G+ P   T+NLLI+G     +I E+      + + +L+P   ++N +I   C 
Sbjct: 353 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 412

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN  +A  +       G      TY  LI G    G + E+  LY +M   ++ P+   
Sbjct: 413 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 472

Query: 306 YTSLISSLCQCGKLEEADKYFKIM 329
           +  ++ +  + G   +A+   K M
Sbjct: 473 HNIMVEAYSKYGNEIKAEDLRKEM 496



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 159/350 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +++ L   ++++  +  +  ++   L+N     + T   L++ LCK G++    ++L  +
Sbjct: 122 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 181

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P  ++  +LI    Q   +E       +M  +++  D I Y+ ++    K   +
Sbjct: 182 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 241

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            +A  +  EM   G +     + T I AY   G++E+   ++ EM+  GLKP   ++  +
Sbjct: 242 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 301

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +    K  +I E+++  + M  + +LP+   +N +I    E G   QA  ++      G 
Sbjct: 302 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 361

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           SP+ +TY+ LI G   + +I E  ++   +    + P   +Y +LIS+ C  G +++A  
Sbjct: 362 SPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALD 421

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + M  + +   V  Y  L+      G   +  +L ++M+   + PS +
Sbjct: 422 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 471



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 1/259 (0%)

Query: 115 LLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           +L+RM R      +  +Y++++    +      A+ V++EM +R    N   Y T I  +
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
            + G +E    L  +M   GLKP   T+N+L+ G  +A R+ E+ +  ++M S+K++P  
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             ++ +   L   G++K    +    L  G +  + T S L+ G  K+G++    ++   
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           +    + PT   Y +LI+  CQ G+LE A   F  MKS  + P    Y +L+    +   
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A  L  EM   G+ P+
Sbjct: 241 ITNAQDLLMEMQDNGVNPT 259



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 125/291 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF     ++ R      I++N LI+ + K++R      +   M +N   P   T  T
Sbjct: 206 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 265

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A  + GQL+    +L  +      P V+   S++    +  +I E + +L  M  K+
Sbjct: 266 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 325

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   Y+ I+ A V+    + A ++ E+M   G S +   Y   I   C   +I EA 
Sbjct: 326 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 385

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  + N  L P   ++N LI  C     I+++L   ++M    +  +   ++++I  L
Sbjct: 386 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 445

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
              G   +   +    +     P+   ++ ++  Y+K G   +   L  EM
Sbjct: 446 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 165/349 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            S+N +I  + ++ R      ++  M E    PN  T  T+I    KGG L+    + D+
Sbjct: 201 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 260

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P  I    L+  + +  R+ E   LL  M  + M+ D   YS++     +  +
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 320

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            ++ L ++ + LK G +   +  +  +   C+ GK+  A  ++Q + NAGL P    +N 
Sbjct: 321 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 380

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  +   +E + S   QM SR + P    +N +I  LC+      A  +L    D G
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 440

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +P   T++ LI  Y + G++++   +  EM+   + P + +Y S++++ C+ GK+ EA 
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                M    ++P   +Y +++  ++E G   +A  L E+M S G+ PS
Sbjct: 501 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 549



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/399 (21%), Positives = 169/399 (42%), Gaps = 35/399 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + +R    + I++NT+I    K    +  +R+   M+ +   PN  T   L+S
Sbjct: 219 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 278

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNT----------------------------- 97
            LC+ G++     +LD +  ++  P     +                             
Sbjct: 279 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 338

Query: 98  -----SLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                S++L  + ++ ++     +L+ ++   ++   + Y+ ++    +   LE A   +
Sbjct: 339 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 398

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            +M  R    +   Y   I   C+  +I  A  L+ EM++ G+ P  ETFN LI+   + 
Sbjct: 399 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 458

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            ++E+      +M    L P+  ++  ++   C+ G   +A  +L     K   PN   Y
Sbjct: 459 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 518

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I  Y + G   +   L  +M+   ISP++  Y  LI  LC   ++ EA++    + +
Sbjct: 519 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 578

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           H L+P    Y +L+     +GN  KAL L + M   G+K
Sbjct: 579 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 617



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 168/357 (47%), Gaps = 3/357 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           +YL + G ++   + + L++ + K  +  +   + Q ++     P      TLI+  C+ 
Sbjct: 330 KYL-KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 388

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-A 130
           G+L+       ++  +   P  I   +LI  + + ERI     LL  M + N ++ T+  
Sbjct: 389 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDNGVNPTVET 447

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ ++ A  +   LE   +V  EM + G   N   Y + + A+C+ GKI EA  ++ +M 
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           +  + P  + +N +I+   +    +++    E+M S  + PS   +N +I+ LC      
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  ++    +    P+ ++Y+ LI      G I + L L   M    I  T+  Y  LI
Sbjct: 568 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 627

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           S L   G+L E +  ++ M  +++VP   I+  +V  + + GN+ KA  L +EM+ +
Sbjct: 628 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 149/324 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A +V + L   G   + + +NTLI+   ++   +  +  +  M      P+  T   LI
Sbjct: 358 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 417

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK  ++    D+L  +     +P V    +LI    +  ++E+  ++L  M    + 
Sbjct: 418 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 477

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + ++Y  IV A  K   +  A+ + ++M  +    N+ VY   I AY E+G  ++A  L
Sbjct: 478 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 537

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++M++ G+ P   T+NLLI+G     +I E+      + + +L+P   ++N +I   C 
Sbjct: 538 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCY 597

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN  +A  +       G      TY  LI G    G + E+  LY +M   ++ P+   
Sbjct: 598 RGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 657

Query: 306 YTSLISSLCQCGKLEEADKYFKIM 329
           +  ++ +  + G   +A+   K M
Sbjct: 658 HNIMVEAYSKYGNEIKAEDLRKEM 681



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 159/351 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            +++ L   ++++  +  +  ++   L+N     + T   L++ LCK G++    ++L  
Sbjct: 306 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 365

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P  ++  +LI    Q   +E       +M  +++  D I Y+ ++    K   
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           + +A  +  EM   G +     + T I AY   G++E+   ++ EM+  GLKP   ++  
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++    K  +I E+++  + M  + +LP+   +N +I    E G   QA  ++      G
Sbjct: 486 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+ +TY+ LI G   + +I E  ++   +    + P   +Y +LIS+ C  G +++A 
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              + M  + +   V  Y  L+      G   +  +L ++M+   + PS +
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 656



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 1/263 (0%)

Query: 111 EGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           E + +L+RM R      +  +Y++++    +      A+ V++EM +R    N   Y T 
Sbjct: 182 EAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTM 241

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  + + G +E    L  +M   GLKP   T+N+L+ G  +A R+ E+ +  ++M S+K+
Sbjct: 242 IDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKM 301

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           +P    ++ +   L   G++K    +    L  G +  + T S L+ G  K+G++    +
Sbjct: 302 VPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEE 361

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           +   +    + PT   Y +LI+  CQ G+LE A   F  MKS  + P    Y +L+    
Sbjct: 362 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 421

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           +      A  L  EM   G+ P+
Sbjct: 422 KAERITNAQDLLMEMQDNGVNPT 444



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 126/294 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF     ++ R      I++N LI+ + K++R      +   M +N   P   T  T
Sbjct: 391 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 450

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A  + GQL+    +L  +      P V+   S++    +  +I E + +L  M  K+
Sbjct: 451 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 510

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   Y+ I+ A V+    + A ++ E+M   G S +   Y   I   C   +I EA 
Sbjct: 511 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 570

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  + N  L P   ++N LI  C     I+++L   ++M    +  +   ++++I  L
Sbjct: 571 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 630

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
              G   +   +    +     P+   ++ ++  Y+K G   +   L  EM  K
Sbjct: 631 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 4/192 (2%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF--NEMIRRLCEC 246
           + +AG +P    +N  ++ C  A  + E++    + M R   P  +AF  N +I  +   
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRR-MGRDGAPPPNAFSYNVVIAGMWRA 213

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +     ++   PN ITY+ +I G+ K G+++   +L  +M    + P    Y
Sbjct: 214 GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITY 273

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+S LC+ G++ E       M S  +VP    Y  L       G+    L L  + + 
Sbjct: 274 NVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK 333

Query: 367 EGLKPSTSYLCS 378
            G+     Y CS
Sbjct: 334 NGVTIG-DYTCS 344


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 191/408 (46%), Gaps = 36/408 (8%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           +L E + D  + +  +G S S  SFN  + ++ KS   D  W  +   L   ++ +  + 
Sbjct: 52  QLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSF 110

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              I A C+ G +    ++L ++     SP V + T LI    +   I++  V+  RM  
Sbjct: 111 WITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDD 170

Query: 122 KNMIHDTIAYSLIV---------------YAKVKM--------------------RNLES 146
             +  +   Y++++               Y K+K+                      L  
Sbjct: 171 LGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSL 230

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A  V++E+ KRG + N+  Y   IG  C  G++ +A  L++ M+ A + P   TFN+L++
Sbjct: 231 AFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMD 290

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G     +++++LSY E++    L P+   +N +I    + GN+   + ++    D+G SP
Sbjct: 291 GLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP 350

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +++TY+ L+  + +  +I++  ++++ M+   + P    Y  LI  LC  G + EA K +
Sbjct: 351 SKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLY 410

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           K M    L P   IY +++  + ++ N  KAL   EEMV  G+ P+ +
Sbjct: 411 KSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVA 458



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 134/294 (45%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           + +YQ M      PN  T  +LI+  C+ G+L     + D I  +  +   +    LI  
Sbjct: 197 FELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGG 256

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           + ++ ++ +   LL+RM R ++   T  +++++        L+ AL   E++   G    
Sbjct: 257 LCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPT 316

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y   I  + + G     + L++EME+ G+ P   T+ +L+    ++  IE++     
Sbjct: 317 LVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFH 376

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            M    L+P    +  +I  LC  GN  +A+ +    ++    PN++ Y+ +I GY KE 
Sbjct: 377 LMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKEC 436

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              + LK   EM    ++P + +Y S I  LC+ GK  EA +  K M    L P
Sbjct: 437 NSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 43/281 (15%)

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
           ++N SL     Q + +E+ +   K M+ K     + +++  +    K  NL+     + E
Sbjct: 44  VINASL-----QSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTE 98

Query: 154 MLKRG-FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
            L R  F   SF  T  I A+CE G + +   L+ +ME  G+ P    + +LIE C    
Sbjct: 99  YLGRTQFDVYSFWIT--IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEAC---- 152

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
                                          C  G+  QA  M +   D G + N+  Y+
Sbjct: 153 -------------------------------CRNGDIDQAKVMFSRMDDLGLAANQYIYT 181

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            +I G+ K+G  ++  +LY +M+   + P L  Y SLI+  C+ GKL  A K F  +   
Sbjct: 182 IMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKR 241

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +      Y  L+G    KG  +KA  L E M    + P+T
Sbjct: 242 GVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTT 282



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 35/191 (18%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           V  ++ R +E RG S S +++  L++   +SD  +  + ++  M      P++ T   LI
Sbjct: 335 VVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLI 394

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LC  G +                                    E   L K M+  ++ 
Sbjct: 395 HGLCIKGNMV-----------------------------------EASKLYKSMVEMHLQ 419

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + + Y+ ++    K  N   AL   EEM+K G + N   Y + I   C+ GK  EA  L
Sbjct: 420 PNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRL 479

Query: 186 MQEMENAGLKP 196
           ++EM  AGLKP
Sbjct: 480 LKEMTEAGLKP 490


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 170/361 (47%), Gaps = 1/361 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G + + +S+N++I    +    D+   ++  ML+    PN  T   L+    K G  +
Sbjct: 481 DKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTE 540

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + DR+  +   P        I  + +  R  E   +LK+ + K  +   + Y+ I+
Sbjct: 541 YAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIM 600

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              +K  ++ SAL  Y EM + G S N   YTT I  +C+    + A  +  EM N GL+
Sbjct: 601 DGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLE 660

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +  LI+G  K + IE +     +++   L P+   +N +I       N + A  +
Sbjct: 661 LDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNL 720

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L +G S +  TY+ LI G  KEG +   L LY EM  K I P +  YT LI+ LC 
Sbjct: 721 QKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCG 780

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TS 374
            G+LE A K    M+  S+ P V IY +L+  H + GN  +A  L  EM+ +GL P+ T+
Sbjct: 781 KGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTT 840

Query: 375 Y 375
           Y
Sbjct: 841 Y 841



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 1/356 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++++   TL+    K D+       +  M EN   PN  T   LI   CK G +   
Sbjct: 344 GVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKA 403

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+  ++  K   P V +  SLI   ++ E  EE   L    +  + I +   Y+ ++  
Sbjct: 404 YDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD-IANIFTYNSLLSW 462

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +  A  ++++ML +G +     Y + I  +C  G ++ A  +  +M + GLKP 
Sbjct: 463 LCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPN 522

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++L++G  K    E +    ++M+   ++PS   +N  I  LC+ G   +A  ML 
Sbjct: 523 VITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLK 582

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             ++KGF P  +TY+ ++ G+ KEG +   L  Y EM    +SP +  YT+LI+  C+  
Sbjct: 583 KFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNN 642

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + A K    M++  L   +  Y +L+    +K +   A  L  E++  GL P++
Sbjct: 643 NTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNS 698



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 157/345 (45%), Gaps = 14/345 (4%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++I+++ L+    K+   +  + ++  M++    P++ T    I+ LCK G+    
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            DML +   K   P+ +   S++   I+E  +   +   + M    +  + I Y+ ++  
Sbjct: 578 QDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLING 637

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  N + AL +  EM  +G   +   Y   I  +C+   IE A+ L  E+ + GL P 
Sbjct: 638 FCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPN 697

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N LI G      +E +L+  ++M+   +      +  +I  L +        G L 
Sbjct: 698 SVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLK-------EGRLV 750

Query: 258 LALD-------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           LALD       KG  P+ I Y+ LI G   +G+++   K+  EME  SI+P +P Y +LI
Sbjct: 751 LALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI 810

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
           +   + G L+EA +    M    L P    Y+ L+   ++ GN A
Sbjct: 811 AGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSA 855



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 162/358 (45%), Gaps = 1/358 (0%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           + RG  L   +++ +I    K+   +L   + + M +    P+E T  ++I A  K G +
Sbjct: 271 KSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNM 330

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              + + D +        V+V T+L+    +++++   +    +M       + + Y+++
Sbjct: 331 VEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVL 390

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K  N+  A  +Y +M  +      F+  + I  + +    EEA+ L  E     +
Sbjct: 391 IEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI 450

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                T+N L+    K  ++ E+ +  ++M+ + L P+  ++N MI   C  GN   A  
Sbjct: 451 ANI-FTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAAS 509

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           + +  LD G  PN ITYS L+ GY K G+ +    ++  M  ++I P+   Y   I+ LC
Sbjct: 510 VFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLC 569

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + G+  EA    K       VP    Y S++   +++G+ + AL    EM   G+ P+
Sbjct: 570 KVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPN 627



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 174/411 (42%), Gaps = 55/411 (13%)

Query: 17  RGFSLSLISFNTLIHVVTKS-----------------DRNDLVWRIYQHMLENI-RYPNE 58
           RGF  SL S   L+H++T+S                 D   +   +  H + +  R+  +
Sbjct: 112 RGFVRSLDSLCVLLHILTRSSETLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFD 171

Query: 59  ATIRT---LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           + IR    L+++  K  +L   +   +R+      P +     L+  +++ + I E   +
Sbjct: 172 SDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREV 231

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            ++M+ K +  D     +++ A +K  N E A   + E   RG   ++  Y+  I A+C+
Sbjct: 232 YEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCK 291

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              +E A  L+++M + G  P + TF  +I  C K   + E+L   ++M+S  +  +   
Sbjct: 292 NLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVV 351

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
              +++  C+      A        + G SPN +TY+ LI    K G + +   LY +M+
Sbjct: 352 ATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMK 411

Query: 296 YKSISPT----------------------------------LPAYTSLISSLCQCGKLEE 321
            K+I PT                                  +  Y SL+S LC+ GK+ E
Sbjct: 412 NKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSE 471

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A   ++ M    L P    Y S++  H  +GN   A  +  +M+  GLKP+
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPN 522


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 176/369 (47%), Gaps = 6/369 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G ++ + ++ T++  + K+ +      + + +  N   P  AT   L++ LCK G+L+  
Sbjct: 29  GCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 88

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L +I    C+P V+  TSLI  + +++R  E   L K M  + +  DT+ Y+ ++  
Sbjct: 89  IDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRG 148

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            ++   +  A  VY+ M  +G   +    +T I   C+ G+I  A  + + ME  GL P 
Sbjct: 149 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 208

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           +  ++ LI G  KA++++ +L    QM      P    +N +I  LC+ G+   A     
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFD 268

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L+ G  P+  TY+ LI G+ K G       ++ +M     SP +  Y +LIS LC+  
Sbjct: 269 EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRR 328

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS--- 374
           +L +A  Y++ MK     P   +Y SLV    + G       L +EM   G+  S +   
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR 388

Query: 375 ---YLCSAS 380
              +LC A+
Sbjct: 389 LIFHLCKAN 397



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 165/364 (45%), Gaps = 2/364 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   E A D+ R +   G +  ++++ +LI  + K  R+   +++++ M       +   
Sbjct: 82  MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVC 141

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  L + G++     +   +  + C P V+  +++I  + +  RI   + + K M 
Sbjct: 142 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 201

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + YS +++   K R ++ AL +  +M K   + ++  Y   I   C+ G + 
Sbjct: 202 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVA 261

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A     EM  AG KP   T+N+LI G  KA   + +    + M S +  P+   +  +I
Sbjct: 262 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLI 321

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+     +A+       ++G  P+   YS L+ G  K G+++    L+ EME   ++
Sbjct: 322 SGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA 381

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            +    T LI  LC+  +++EA   F  ++   + P    Y S++   ++ G   +   +
Sbjct: 382 NS-QTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAV 439

Query: 361 CEEM 364
            +EM
Sbjct: 440 YQEM 443



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 138/313 (44%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T   LI+ L K G L     +        C+  +   T+++  + + ++I+E + L++++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
                      Y+ ++    KM  LE A+ +  +++  G + +   YT+ I    +  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            EA  L +EM + GL      +  LI G  +A +I ++ S  + M S+  +P     + M
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+ G    A  +      +G +PNE+ YS LI G  K  ++   L++  +M+    
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P    Y  LI  LC+ G +  A  +F  M      P V  Y  L+    + GN   A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 360 LCEEMVSEGLKPS 372
           + ++M S    P+
Sbjct: 301 VFDDMSSSRCSPN 313



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 2/149 (1%)

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           F+ +I  L + G   QA+ +       G + +  TY+ ++   AK  +IQE + L  ++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
               +PT+  Y +L++ LC+ G+LEEA    + +  +   P V  Y SL+    +K    
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 356 KALHLCEEMVSEGLKPSTSYLCSASTCRG 384
           +A  L +EM S GL   T  +C  +  RG
Sbjct: 122 EAYKLFKEMASRGLALDT--VCYTALIRG 148


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 170/393 (43%), Gaps = 35/393 (8%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  + LI +  L+  + K  + D    +++H L +   PN  T   LI ALCK G + 
Sbjct: 342 SRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVD 401

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L  +  K  SP V+  +S+I  +++   + +    ++ M  + +  + + Y  ++
Sbjct: 402 GAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVI 461

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K    E+AL VY EML  G   N F+  + +    + GKIE+A  L +EM   G+ 
Sbjct: 462 DGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVL 521

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +  LI+G  K   +  +    +++  + LLP    +N  I  LC  G +K+A   
Sbjct: 522 LDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESF 581

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L      G  P+++TY+ +I   ++EG+  + LKL   M+  SI P L  Y++LI  L +
Sbjct: 582 LEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFE 641

Query: 316 CGKLEEADKYFKIMKSHSLVP-----------------------------------GVDI 340
            G +E+A      M S    P                                    + +
Sbjct: 642 AGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITV 701

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           Y +LV +    G   KA+ + EEM   G+ P T
Sbjct: 702 YNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDT 734



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 175/357 (49%), Gaps = 2/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN--IRYPNEATIRTLISALCKGGQ 73
           +RG     ++ NT++  + +  R D    + + M+    I   +     +L+   CK G 
Sbjct: 130 KRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGD 189

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++T   + +R+  +     V+   SL+  + +   ++    ++  M R  +  + + Y++
Sbjct: 190 METAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTM 249

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +    +   ++ A  +YEEM+++G   +    +  +G  C+ G+  EA  L +EME  G
Sbjct: 250 FIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIG 309

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+ +LI+  AKA+R  ESLS   +++SR ++     +  ++  LC+ G   +A 
Sbjct: 310 AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M   AL    +PN +TY+ LI    K G +    ++  EME KSISP +  ++S+I+ L
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGL 429

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            + G + +A  Y + MK   + P V  Y +++    +   +  AL +  EM+ EG++
Sbjct: 430 VKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVE 486



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 173/374 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V + L ++      + +N  I+ +    ++       + M      P++ T  T+I+
Sbjct: 543 AFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIA 602

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  + G+    + +L+ +      P +I  ++LI+ + +   +E+   LL  M       
Sbjct: 603 AQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSP 662

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            ++ +  ++ A  + R  +  L ++E M+  G  A+  VY T +   C  G   +A  ++
Sbjct: 663 TSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVL 722

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G+ P   TFN LI G  K+  ++ + S  +QM+   + P+ + FN ++  L   
Sbjct: 723 EEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESA 782

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +++ +L     +G  P+ +TY  L+ GY K+    E ++LY EM  K   P +  Y
Sbjct: 783 GRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTY 842

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LIS   + G + +A + F  M++  ++P    Y+ LV    +  N  +     ++M  
Sbjct: 843 NALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKE 902

Query: 367 EGLKPSTSYLCSAS 380
           +G  PS   L S S
Sbjct: 903 KGFSPSKGTLSSIS 916



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 168/370 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A DV   +   G  ++    ++L++ + K+ + +    +++ M E     +     TL
Sbjct: 471 EAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTL 530

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K G L     +   +  K   P  +V    I  +    + +E    L+ M    +
Sbjct: 531 IDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGL 590

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ ++ A+ +      AL +   M +     N   Y+T I    E G +E+A  
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKY 650

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM ++G  P   T   +++ C++ +R +  L   E MM+  L    + +N ++R LC
Sbjct: 651 LLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  ++A  +L     +G +P+ IT++ LI G+ K G +      Y +M Y  ISP + 
Sbjct: 711 YNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA 770

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + +L+  L   G++ E+D     MK   + P    Y+ LV  + ++ NK +A+ L  EM
Sbjct: 771 TFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEM 830

Query: 365 VSEGLKPSTS 374
           V +G  P  S
Sbjct: 831 VGKGFLPKVS 840



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 169/403 (41%), Gaps = 35/403 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A D+   +++ G   +++++   I    + +  D  + +Y+ M+     P+  T+  L
Sbjct: 226 DAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSAL 285

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G+      +   +     +P  +    LI  + + +R  E + LL  ++ + +
Sbjct: 286 VGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGV 345

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D I Y+ ++    K   ++ A  ++   L    + N   YT  I A C+ G ++ A  
Sbjct: 346 VMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQ 405

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI---- 240
           ++ EME   + P   TF+ +I G  K   + ++  Y  +M  R + P+   +  +I    
Sbjct: 406 VLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSF 465

Query: 241 -------------RRLCEC------------------GNAKQANGMLTLALDKGFSPNEI 269
                          LCE                   G  ++A  +     ++G   + +
Sbjct: 466 KCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHV 525

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+ LI G  K G +    K+  E+  K++ P    Y   I+ LC  GK +EA+ + + M
Sbjct: 526 NYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEM 585

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +S  L P    Y +++     +G  AKAL L   M    +KP+
Sbjct: 586 QSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPN 628



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/370 (21%), Positives = 164/370 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF V   ++ +G  + ++ +N+L+  + ++   D    +   M  +   PN  T   
Sbjct: 190 METAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTM 249

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I   C+   +     + + +  K   P V+  ++L+  + ++ R  E   L + M +  
Sbjct: 250 FIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIG 309

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y +++    K +    +L +  E++ RG   +  +YT  +   C+ GKI+EA 
Sbjct: 310 AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +   +    P   T+ +LI+   KA  ++ +     +M  + + P+   F+ +I  L
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGL 429

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G   +A   +    ++G  PN +TY  +I G  K    +  L +Y+EM  + +    
Sbjct: 430 VKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNK 489

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               SL++ L + GK+E+A+  F+ M    ++     Y +L+    + GN   A  + +E
Sbjct: 490 FIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQE 549

Query: 364 MVSEGLKPST 373
           +  + L P  
Sbjct: 550 LTEKNLLPDA 559



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 5/296 (1%)

Query: 87  KRCSPM--VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH--DTIAYSLIVYAKVKMR 142
           KR  P   V VNT L+  + ++ R++    L + M+R   I   D + ++ +V    K+ 
Sbjct: 130 KRGVPFDAVTVNTVLV-GLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVG 188

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           ++E+A  V E M  +G   +   Y + +   C  G+++ A  ++  M+  G++P   T+ 
Sbjct: 189 DMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYT 248

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           + I    +   ++++ S  E+M+ + +LP     + ++  LC+ G   +A  +       
Sbjct: 249 MFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKI 308

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G +PN +TY  LI   AK     E L L  E+  + +   L  YT+L+  LC+ GK++EA
Sbjct: 309 GAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEA 368

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
              F+   S +  P    Y  L+    + GN   A  +  EM  + + P+     S
Sbjct: 369 KDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSS 424



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 35/250 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +  RG +   I+FN LI    KS   D  +  Y  ML +   PN AT  TL+ 
Sbjct: 718 AMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLG 777

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L   G                                   RI E  ++L  M ++ +  
Sbjct: 778 GLESAG-----------------------------------RIGESDMVLNEMKKRGIEP 802

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y ++V    K  N   A+ +Y EM+ +GF      Y   I  + + G + +A  L 
Sbjct: 803 SNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELF 862

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM+N G+ P   T+++L+ G +K +   E   + + M  +   PS    + + R   + 
Sbjct: 863 NEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKP 922

Query: 247 GNAKQANGML 256
           G + +A  +L
Sbjct: 923 GMSWEARRLL 932



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 9/240 (3%)

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE- 199
           +R+L  AL     +L+   S ++  Y   +  + E G +     L+ EM   G+ P+D  
Sbjct: 85  LRSLRPALA----LLRSSESVDTVSYNVVMSGFSEQGGLA-PEALLAEMCKRGV-PFDAV 138

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS--AFNEMIRRLCECGNAKQANGMLT 257
           T N ++ G  +  R++ + +  E M+    +       +N ++   C+ G+ + A  +  
Sbjct: 139 TVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAE 198

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +G   + + Y+ L+ G  + GE+     +   M+   + P +  YT  I   C+  
Sbjct: 199 RMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRN 258

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
            +++A   ++ M    ++P V    +LVG   + G  ++A  L  EM   G  P+    C
Sbjct: 259 AVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYC 318


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 174/364 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + + +  RG    L+SF+ LI +  +  + D      + M      P+      +
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G +   + + D + G  C P V+   +L+  + +E R+ +   LL  M  + +
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   ++ +++       L+ AL +++ ML +    +   Y T I   C  G +++AN 
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M +  + P   T+++LI+   +  ++E++  + ++M+++ +LP+   +N +I+  C
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             GN  +    L   +    SP+ ITY+ LI GY KE ++ +  KL   ME + + P + 
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 516

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  LI+     G ++EA   F+ M +  + P    Y S++  H+  GN  +A  L +EM
Sbjct: 517 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576

Query: 365 VSEG 368
           +  G
Sbjct: 577 LQRG 580



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 177/367 (48%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A D  R +      ++  + N ++H   K+   D V  +   M +   +P+  T   ++
Sbjct: 78  LAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMV 137

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A  + G  +  + ++D +  K   P ++   S++  + +    ++   + K M    + 
Sbjct: 138 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 197

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D  ++++++    ++  +E AL +Y+EM  RG   +   ++  IG +   GK++ A   
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++EM   GL P    + ++I G  +A  + ++L   ++M+    LP    +N ++  LC+
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A G+L    ++G  P+  T++ LI GY  EG++ + L+L+  M  + + P +  
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI  +C+ G L++A+  +  M S  + P    Y  L+  H EKG    A    +EM+
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437

Query: 366 SEGLKPS 372
           ++G+ P+
Sbjct: 438 NKGILPN 444



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 175/369 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +  +G    ++++N+++  + +S   D  W +++ M +    P+  +   L
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G+++  + +   +  +   P ++  + LI    +  +++  M  L+ M    +
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGL 266

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + Y++++    +   +  AL V +EM+  G   +   Y T +   C+  ++ +A  
Sbjct: 267 VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 326

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM   G+ P   TF  LI G     +++++L   + M++++L P    +N +I  +C
Sbjct: 327 LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 386

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+  +AN +      +   PN +TYS LI  + ++G++++      EM  K I P + 
Sbjct: 387 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y S+I   C+ G + +  K+ + M  + + P +  Y +L+  ++++     A  L   M
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506

Query: 365 VSEGLKPST 373
             E ++P  
Sbjct: 507 EKEKVQPDV 515



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 164/369 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+    V   +E+R     +++ N ++    ++   +    +   M+     P   T  +
Sbjct: 111 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 170

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++  LC+ G      ++   +     +P V   T LI    +   IEE + + K M  + 
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D +++S ++    +   ++ A+    EM   G   +  +YT  IG +C  G + +A 
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  EM   G  P   T+N L+ G  K +R+ ++     +M  R + P    F  +I   
Sbjct: 291 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 350

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A  +    L++   P+ +TY+ LI G  ++G++ +   L+ +M  + I P  
Sbjct: 351 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 410

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI S C+ G++E+A  +   M +  ++P +  Y S++  +   GN +K     ++
Sbjct: 411 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 470

Query: 364 MVSEGLKPS 372
           M+   + P 
Sbjct: 471 MMVNKVSPD 479



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 71/178 (39%)

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    F+LLI    ++++  E+      ++  ++    +A N ++  L   G    A   
Sbjct: 23  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             L        N  T + ++  Y K  E  +V  +  EME + + P +  +  ++ +  +
Sbjct: 83  YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G  E A      M S  L PG+  Y S++      G   KA  + +EM   G+ P  
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 200


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 159/328 (48%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           +  M  N   PN  T  TLI A CK G++     +L  +  K   P +I    +I  + +
Sbjct: 33  FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR 92

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           E  ++E   +L+ M  K    D + Y+ ++    K  N   ALV++ EM++ G S +   
Sbjct: 93  EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 152

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           YT  I + C+   +  A     +M   GL+P + T+  LI+G ++   + E+     +M 
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                PS   +N  I   C     ++A G++   ++KG +P+ ++YS +I G+ ++GE+ 
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 272

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              ++  EM  K +SP    Y+SLI  LC+  +L EA    + M    L P    Y +L+
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +  +G+  KALHL +EM+ +G  P  
Sbjct: 333 NAYCVEGDLNKALHLHDEMIHKGFLPDA 360



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 180/382 (47%), Gaps = 15/382 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  +GF+   +++NTL++   K         I+  M+ N   P+  T   LI+
Sbjct: 99  AWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALIN 158

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ++CK   L   ++  D++  +   P     T+LI    ++  + E   +L  M       
Sbjct: 159 SMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 218

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+  ++    +  +E AL V +EM+++G + +   Y+T I  +C  G+++ A  + 
Sbjct: 219 SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 278

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM   G+ P   T++ LI+G  + +R+ E+    ++M+   L P    +  +I   C  
Sbjct: 279 QEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVE 338

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +    + KGF P+ +TYS LI G  K+   +E  +L +++ Y+   P+   Y
Sbjct: 339 GDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTY 398

Query: 307 TSLISS---------------LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +LI +                C  G + EAD+ F+ M   +  PG  +Y  ++  H   
Sbjct: 399 DTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRG 458

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           GN  KA +L +EM+  G  P T
Sbjct: 459 GNLPKAFNLYKEMIHSGFVPHT 480



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 169/359 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++NTLI    K  R D  + + + M      PN  +   +I+ LC+ G 
Sbjct: 36  MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 95

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++L+ +  K  +P  +   +L+    +E    + +V+   M+R  +    + Y+ 
Sbjct: 96  MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 155

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ +  K RNL  A+  +++M  RG   N   YTT I  +   G + EA  ++ EM  +G
Sbjct: 156 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 215

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N  I G    +R+EE+L   ++M+ + L P   +++ +I   C  G   +A 
Sbjct: 216 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 275

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M    ++KG SP+ +TYS LI G  +   + E   L  EM    + P    YT+LI++ 
Sbjct: 276 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 335

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G L +A      M     +P    Y  L+    ++    +A  L  +++ E   PS
Sbjct: 336 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 394



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 115/219 (52%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M++   S N + Y   I  +C  G++++      EME  G  P   T+N LI+   K  R
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           I+E+    + M S+ + P+  ++N +I  LC  G+ K+A  +L     KGF+P+E+TY+ 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           L+ GY KEG   + L ++ EM    +SP++  YT+LI+S+C+   L  A ++F  M+   
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L P    Y +L+     +G   +A  +  EM   G  PS
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 219



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 130/286 (45%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R SP V     LI        +++G+     M R   + + + Y+ ++ A  KM  ++ A
Sbjct: 5   RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             + + M  +G   N   Y   I   C  G ++EA  +++EM   G  P + T+N L+ G
Sbjct: 65  FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K     ++L    +M+   + PS   +  +I  +C+  N  +A         +G  PN
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           E TY+ LI G++++G + E  ++  EM     SP++  Y + I   C   ++EEA    +
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            M    L P V  Y +++     KG   +A  + +EMV +G+ P  
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDA 290



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 170/407 (41%), Gaps = 50/407 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  +   + + G S S++++  LI+ + K+   +     +  M      PNE T  T
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    + G L     +L+ +     SP V+   + I      ER+EE + +++ M+ K 
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D ++YS I+    +   L+ A  + +EM+++G S ++  Y++ I   CE  ++ EA 
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L QEM + GL P + T+  LI        + ++L   ++M+ +  LP    ++ +I  L
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370

Query: 244 CECGNAKQANGML-----------------------------TLALDKGF---------- 264
            +    ++A  +L                              +AL KGF          
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430

Query: 265 -----------SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                       P E  Y+ +I G+ + G + +   LY EM +    P      +LI +L
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            + G  EE  +          +   ++ + LV I+ ++GN    L++
Sbjct: 491 FKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNV 537


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 183/381 (48%), Gaps = 5/381 (1%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y++Q    GF    I++NT ++ + ++D      ++   M++    P+  T   ++
Sbjct: 177 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 236

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK GQL+    +L+++  + C P +    +LI  +    R+EE + L +++  K + 
Sbjct: 237 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 296

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   +++++ A  K+ +   AL ++EEM   G + +   Y T I   C  GK+ +A  L
Sbjct: 297 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 356

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++ME+ G      T+N +I+G  K  RIEE+    +QM  + +  +   FN +I  LC+
Sbjct: 357 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 416

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A  ++   + +G  PN ITY+ ++  Y K+G+I++   +   M        +  
Sbjct: 417 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 476

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI+ LC+ G+ + A K  + M+   + P    Y  ++     + N   AL L  EM 
Sbjct: 477 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 536

Query: 366 SEGLKPS--TSYLCSASTCRG 384
             G  P   T  +     CRG
Sbjct: 537 EVGEPPDALTYKIVFRGLCRG 557



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 37/409 (9%)

Query: 2   RLFEVAFDVCRYLEQR--GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           +LF+ A D+     Q   G     + +N L++V+ +  +  L+  +Y  M      P+  
Sbjct: 31  QLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVV 90

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  TL+ ALC+  Q++T V ML+ +  +  +P     T+L+   ++E  IE  + +  RM
Sbjct: 91  TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 150

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY--- 176
           L        +  ++++    K+  +E AL   ++ +  GF  +   Y TF+   C+    
Sbjct: 151 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 210

Query: 177 --------------------------------GKIEEANCLMQEMENAGLKPYDETFNLL 204
                                           G++EEA  ++ +M + G  P   TFN L
Sbjct: 211 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 270

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I       R+EE+L    Q+  + + P    FN +I  LC+ G+   A  +     + G 
Sbjct: 271 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 330

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+E+TY+ LI      G++ + L L  +ME      +   Y ++I  LC+  ++EEA++
Sbjct: 331 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 390

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            F  M    +      + +L+    +      A  L  +M+SEGL+P+ 
Sbjct: 391 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 439



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 168/369 (45%), Gaps = 1/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q G    + ++N +++ + K+ + +    I   M++    P+  T  TLI+
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC G +L+  +D+  ++  K  SP V     LI  + +       + L + M       
Sbjct: 273 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  L  AL + ++M   G   ++  Y T I   C+  +IEEA  + 
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  G+     TFN LI+G  K K+I+++     QM+S  L P+   +N ++   C+ 
Sbjct: 393 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 452

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  +L      GF  + +TY  LI G  K G  Q  LK+   M  K + PT  AY
Sbjct: 453 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 512

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMV 365
             ++ SL +   + +A   F+ M      P    Y+ +  G+    G   +A     EMV
Sbjct: 513 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 572

Query: 366 SEGLKPSTS 374
            +G  P  S
Sbjct: 573 DKGFIPEFS 581



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 6/343 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ R +  +G S  + +FN LI+ + K     L  R+++ M  +   P+E T  T
Sbjct: 280 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 339

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D+L  +    C    I   ++I  + ++ RIEE   +  +M  + 
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I ++ ++    K + ++ A  +  +M+  G   N+  Y + +  YC+ G I++A 
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 459

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++ M   G +    T+  LI G  KA R + +L     M  + + P+  A+N +++ L
Sbjct: 460 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 519

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
               N + A  +     + G  P+ +TY  +  G  +  G I+E      EM  K   P 
Sbjct: 520 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 579

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             ++  L   L   G     D YF I     ++  VD+ ES V
Sbjct: 580 FSSFRMLAEGLLNLG----MDDYF-IRAIEIIMEKVDLRESDV 617



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 162/357 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG +    +F TL+    +    +   R+   MLE      + T+  LI+  CK G+
Sbjct: 115 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 174

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +  + +       P  I   + +  + Q + +   + ++  M+++    D   Y++
Sbjct: 175 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 234

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K   LE A  +  +M+ RG   +   + T I A C   ++EEA  L +++   G
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   TFN+LI    K      +L   E+M +    P    +N +I  LC  G   +A 
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 354

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L      G   + ITY+ +I G  K+  I+E  +++ +M+ + IS     + +LI  L
Sbjct: 355 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 414

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C+  K+++A +    M S  L P    Y S++  + ++G+  KA  + E M + G +
Sbjct: 415 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 471



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 2/229 (0%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G  A++ VY   +    E  K++    +  EM   G+KP   TFN L++   +A ++  +
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   E+M SR + P  + F  +++   E G+ + A  +    L+ G S  ++T + LI G
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           Y K G +++ L    +       P    Y + ++ LCQ   +  A K   +M      P 
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS--ASTCRG 384
           V  Y  +V    + G   +A  +  +MV  G  P  +   +  A+ C G
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 277


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 172/369 (46%), Gaps = 1/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q G    + ++NT+I+ ++K+   D    I   M++    P+  T  TLI 
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC   +L+  +D+   +  K  SP V     LI  + +      G+ L + M       
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y++++     M  L +AL + +EM   G   ++  Y T I A C+  +IEEA  + 
Sbjct: 439 DEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  G+     TFN LI+G  KAKRI+++    EQM+   L PS   +N ++   C+ 
Sbjct: 499 DQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQ 558

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  +L      GF  + +TY  LI G  K G  Q  LKL   M  K I PT  AY
Sbjct: 559 GDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMV 365
             +I SL +   L +A   F+ M      P    Y+ +  G+    G   +A     EMV
Sbjct: 619 NPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMV 678

Query: 366 SEGLKPSTS 374
           ++G  P  S
Sbjct: 679 NKGFMPEFS 687



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 182/408 (44%), Gaps = 36/408 (8%)

Query: 1   MRLFEVAFDVCR-YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           +R F+ A D+ R  L   G       +N L++V+ +  R  L+  +Y  M +    P+  
Sbjct: 137 LRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVV 196

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQE------------- 106
           T+ TLI ALC+  Q++T V ML+ +     +P     T+L+   I+E             
Sbjct: 197 TLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKM 256

Query: 107 ----------------------ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                                  R+E+ +  +++ +      D + Y+  V+   +  ++
Sbjct: 257 METGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHV 316

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             AL V + ML+ G   + F Y T I    + G+++EA  ++ +M + G  P   TFN L
Sbjct: 317 SHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL 376

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I       R+EE+L    ++  + L P    FN +I  LC+ G+      +       G 
Sbjct: 377 IVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGC 436

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+E+TY+ LI      G++   L L  EME      +   Y ++I +LC+  ++EEA++
Sbjct: 437 APDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEE 496

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            F  M +H +      + +L+    +      A  L E+MV EGL+PS
Sbjct: 497 VFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPS 544



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 172/369 (46%), Gaps = 2/369 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF    +++NT +H + ++       ++   ML+    P+  T  T+I+ L K G+L   
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +++++  + C P      +LI+ +  + R+EE + L + +  K +  D   +++++ A
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+ +    + ++EEM   G + +   Y   I   C  GK+  A  L++EME+ G    
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N +I+   K  RIEE+    +QM +  +  S   FN +I  LC+      A  ++ 
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIE 534

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G  P+ ITY+ ++  Y K+G++++   +   M        +  Y +LI+ LC+ G
Sbjct: 535 QMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAG 594

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS--TSY 375
           + + A K  + M+   + P    Y  ++     + N   AL L  EM   G  P   T  
Sbjct: 595 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYK 654

Query: 376 LCSASTCRG 384
           +     CRG
Sbjct: 655 IVFRGLCRG 663



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 143/315 (45%), Gaps = 1/315 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ R L  +G S  + +FN LI+ + K     L  R+++ M  +   P+E T   
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNI 445

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D+L  +    C    +   ++I  + ++ RIEE   +  +M    
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + ++ ++    K + ++ A  + E+M+K G   ++  Y + +  YC+ G +++A 
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAA 565

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++ M   G +    T+  LI G  KA R + +L     M  + + P+  A+N +I+ L
Sbjct: 566 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 625

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
               N + A  +     + G  P+ +TY  +  G  +  G I+E      EM  K   P 
Sbjct: 626 FRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPE 685

Query: 303 LPAYTSLISSLCQCG 317
             ++  L   L   G
Sbjct: 686 FSSFRMLAEGLLNLG 700



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 154/346 (44%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F TL+    +    +   R+   M+E    P   T+  LI+  CK G+++  +  + + 
Sbjct: 232 TFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P  +   + +  + Q   +   + ++  ML++    D   Y+ ++    K   L
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 351

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  +  +M+ RG   ++  + T I A C   ++EEA  L +E+   GL P   TFN+L
Sbjct: 352 DEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNIL 411

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    K       +   E+M S    P    +N +I  LC  G    A  +L      G 
Sbjct: 412 INALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGC 471

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             + +TY+ +I    K+  I+E  +++ +M+   IS +   + +LI  LC+  ++++A +
Sbjct: 472 PRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATE 531

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             + M    L P    Y S++  + ++G+  KA  + E M + G +
Sbjct: 532 LIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 1/242 (0%)

Query: 134 IVYAKVKMRNLESAL-VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            V +  ++R  + A+ +V  ++   G  A++ VY   +    E  +++    +  EM + 
Sbjct: 130 FVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDR 189

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G++P   T N LI+   +A ++  ++   E+M S  + P  + F  +++   E G+ + A
Sbjct: 190 GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAA 249

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             + T  ++ G SP  +T + LI GY K G +++ L    +       P    Y + +  
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHC 309

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LCQ G +  A K   +M      P V  Y +++    + G   +A  +  +MV  G  P 
Sbjct: 310 LCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPD 369

Query: 373 TS 374
           T+
Sbjct: 370 TT 371


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 174/358 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V     + GF  + I+F+TLI+      R      +   M+E    PN  T+ TLI+
Sbjct: 123 AFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLIN 182

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G++   + ++DR+    C    I    ++ R+ +       + L ++M  +++  
Sbjct: 183 GLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKA 242

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + YS+++ +  K  NL+ AL ++ EM  +G  A+   Y++ IG  C  G+ ++   ++
Sbjct: 243 SVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKML 302

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   TF+ LI+   K  ++ E+     +M++R + P    ++ +I   C+ 
Sbjct: 303 REMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKE 362

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +AN ML L + KG  PN +TYS LI  Y K   +   ++L+ E+  K +      Y
Sbjct: 363 NRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTY 422

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +L+   CQ GKL  A + F+ M S  + P V  Y  L+    + G   KAL + E+M
Sbjct: 423 NTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 176/370 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++    C+ ++  G   ++ + N +I+   +  +    + +    L+    PN  T  T
Sbjct: 85  YDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFST 144

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  C  G++   V ++DR+   +  P V+   +LI  +  + R+ E +VL+ RM++  
Sbjct: 145 LINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYG 204

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + I Y  ++    K  N   AL ++ +M +R   A+   Y+  I + C+ G +++A 
Sbjct: 205 CEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL 264

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EME  G+K     ++ +I G     R ++      +M+ R ++P+   F+ +I   
Sbjct: 265 SLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G   +A  +    + +G +P+ ITYS LI G+ KE  + E  ++   M  K   P +
Sbjct: 325 VKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNI 384

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI+S C+  +++   + F  + S  LV     Y +LV    + G    A  L +E
Sbjct: 385 VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444

Query: 364 MVSEGLKPST 373
           MVS G+ PS 
Sbjct: 445 MVSRGVPPSV 454



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 176/349 (50%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++  +++ + KS    L   +++ M E     +      +I +LCK G L   + + + 
Sbjct: 210 ITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNE 269

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K     V+  +S+I  +  + R ++G  +L+ M+ +N+I + + +S ++   VK   
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L  A  +Y EM+ RG + ++  Y++ I  +C+  ++ EAN ++  M + G +P   T+++
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI    KAKR++  +    ++ S+ L+     +N +++  C+ G    A  +    + +G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ +TY  L+ G    GE+Q+ L+++ +M+   +   +  Y  +I  +C   K+++A 
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F  +    + P V  Y  ++G   +KG+ ++A  L  +M  +G  PS
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 158/352 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SLI F+ L   V +    DLV    + M  N    N  T+  +I+  C+  +L     ++
Sbjct: 68  SLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVV 127

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            R       P  I  ++LI     E R+ E + L+ RM+      + +  + ++      
Sbjct: 128 GRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLK 187

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  ALV+ + M+K G  AN   Y   +   C+ G    A  L ++ME   +K     +
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQY 247

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           +++I+   K   ++++LS   +M  + +     A++ +I  LC  G       ML   + 
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIG 307

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +   PN +T+S LI  + KEG++ E  +LY EM  + I+P    Y+SLI   C+  +L E
Sbjct: 308 RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGE 367

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A++   +M S    P +  Y  L+  + +       + L  E+ S+GL   T
Sbjct: 368 ANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADT 419



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 147/299 (49%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E +G    +++++++I  +    R D   ++ + M+     PN  T   LI    K G+
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    ++ + +  +  +P  I  +SLI    +E R+ E   +L  M+ K    + + YS+
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ +  K + +++ + ++ E+  +G  A++  Y T +  +C+ GK+  A  L QEM + G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+ +L++G      ++++L   E+M   +++     +N +I  +C       A 
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +      KG  P+ +TY+ +IGG  K+G + E   L+ +M+    +P+   Y  LI +
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA 568



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 142/301 (47%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++   +D+ + +   R  P +I  + L   + + +  +  +   K M    + H+    +
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    + R L  A  V    LK GF  N+  ++T I  +C  G++ EA  L+  M   
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   T N LI G     R+ E+L   ++M+      +   +  ++ R+C+ GN   A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +     ++    + + YS +I    K+G + + L L+ EME K I   + AY+S+I  
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  G+ ++  K  + M   +++P V  + +L+ + +++G   +A  L  EMV+ G+ P 
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPD 348

Query: 373 T 373
           T
Sbjct: 349 T 349



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 150/320 (46%), Gaps = 4/320 (1%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +  R    ++++F+ LI V  K  +      +Y  M+     P+  T  +LI   CK 
Sbjct: 303 REMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKE 362

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            +L     MLD +  K C P ++  + LI    + +R++ GM L   +  K ++ DT+ Y
Sbjct: 363 NRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTY 422

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +V    +   L  A  +++EM+ RG   +   Y   +   C+ G++++A  + ++M+ 
Sbjct: 423 NTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQK 482

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + +      +N++I G   A +++++ S    +  + + P    +N MI  LC+ G+  +
Sbjct: 483 SRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSE 542

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A+ +     + G +P++ TY+ LI  +     +   ++L  EM+ +  +        ++ 
Sbjct: 543 ADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVV 602

Query: 312 SLCQCGKLEEADKYFKIMKS 331
            L   G+L   DK F  M S
Sbjct: 603 MLSD-GRL---DKTFLDMLS 618



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 120/270 (44%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           I + ++ E + L + M++   +   I +S +  A  + +  +  L   +EM   G   N 
Sbjct: 45  IVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNM 104

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           +     I  +C   K+  A  ++      G +P   TF+ LI G     R+ E+++  ++
Sbjct: 105 YTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDR 164

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+  K  P+    N +I  LC  G   +A  ++   +  G   NEITY  ++    K G 
Sbjct: 165 MVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGN 224

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
               L L+ +ME +SI  ++  Y+ +I SLC+ G L++A   F  M+   +   V  Y S
Sbjct: 225 TALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSS 284

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++G     G       +  EM+   + P+ 
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMIGRNIIPNV 314


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 177/357 (49%), Gaps = 1/357 (0%)

Query: 18  GFSLSLISFNTLIHVV-TKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           G + ++ ++N L+  +  +  R + +  +   M      PN  T  TL++A C+ G++  
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++  +      P ++   +++  + +  R+E+   +   M R+ +  D ++Y+ +V 
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   L  AL V+ EM ++G   +   +T+ I A C  G +E A  L+ +M   GL+ 
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
            + TF  LI+G  +   ++++L   ++M   ++ PS   +N +I   C+ G   +A  ++
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                KG  P+ +TYS ++ GY K G+     +L  +M  K + P    Y+SLI  LC+ 
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +L +A + F+ M    L P    Y +L+  H ++GN  KAL L +EM+ +G+ P  
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDV 505



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 163/332 (49%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G   SL++FNT+++ + K+ R +   +++  M      P+  +  TL+S  CK G 
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   + +   +  K   P V+  TSLI  + +   +E  + L+ +M  + +  +   ++ 
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +   L+ AL+  +EM +     +   Y   I  YC+ G+++EA  L+ EME  G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T++ ++ G  K    + +     +M+ + ++P    ++ +IR LCE      A 
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L  G  P+E TY+ LI G+ KEG +Q+ L L+ EM  K + P +  Y+ LI  L
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +  + +EA +    +     VP    YE+L+
Sbjct: 516 SKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 165/368 (44%), Gaps = 20/368 (5%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q+G    +++F +LIH + ++   +    +   M E     NE T   LI 
Sbjct: 279 ALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALID 338

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G L   +  +  +   R  P V+    LI    +  R++E   L+  M  K M  
Sbjct: 339 GFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKP 398

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS I+    K+ + +SA  +  +MLK+G   ++  Y++ I   CE  ++ +A  L 
Sbjct: 399 DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF 458

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   GL+P + T+  LI+G  K   ++++LS  ++M+ + +LP    ++ +I  L + 
Sbjct: 459 EKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKS 518

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+A  +L     +   P+ I Y             + ++      E+KS+       
Sbjct: 519 ARTKEAQRLLFKLYYEDPVPDNIKY-------------EALMHCCRTAEFKSV------- 558

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +L+      G + +ADK ++ M          +Y  L+  H   GN  KAL   ++++ 
Sbjct: 559 VALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLR 618

Query: 367 EGLKPSTS 374
            G  P+++
Sbjct: 619 CGFSPNST 626



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 5/249 (2%)

Query: 130 AYSLIVYAKVKMR----NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NC 184
           A SL+ Y  V +     +L SA  +   ML+ G + N + Y   + A C  G+ EEA   
Sbjct: 117 APSLLAYNAVLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  +M  AG  P   T+N L+    +A  ++ +      M    + PS   FN ++  LC
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  + A  M      +G +P+ ++Y+ L+ GY K G + E L ++ EM  K + P + 
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +TSLI ++C+ G LE A      M+   L      + +L+      G    AL   +EM
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 365 VSEGLKPST 373
               ++PS 
Sbjct: 357 RECRIQPSV 365



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 103/252 (40%), Gaps = 50/252 (19%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + AF++ R + ++G     I++++LI  + +  R      +++ ML+    P+E T  TL
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK G +Q  + + D +  K   P V+  + LI  + +  R +E   LL ++  ++ 
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536

Query: 125 IHDTI--------------------------------------------------AYSLI 134
           + D I                                                   YS++
Sbjct: 537 VPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVL 596

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           ++   +  N+  AL  ++++L+ GFS NS    + +    E G   EA+ ++QE+ N   
Sbjct: 597 IHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCS 656

Query: 195 KPYDETFNLLIE 206
               ET   LI+
Sbjct: 657 LADAETSKALID 668


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 183/381 (48%), Gaps = 5/381 (1%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y++Q    GF    I++NT ++ + ++D      ++   M++    P+  T   ++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK GQL+    +L+++  + C P +    +LI  +    R+EE + L +++  K + 
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   +++++ A  K+ +   AL ++EEM   G + +   Y T I   C  GK+ +A  L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++ME+ G      T+N +I+G  K  RIEE+    +QM  + +  +   FN +I  LC+
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A  ++   + +G  PN ITY+ ++  Y K+G+I++   +   M        +  
Sbjct: 509 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI+ LC+ G+ + A K  + M+   + P    Y  ++     + N   AL L  EM 
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628

Query: 366 SEGLKPS--TSYLCSASTCRG 384
             G  P   T  +     CRG
Sbjct: 629 EVGEPPDALTYKIVFRGLCRG 649



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 37/409 (9%)

Query: 2   RLFEVAFDVCRYLEQR--GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           +LF+ A D+     Q   G     + +N L++V+ +  +  L+  +Y  M      P+  
Sbjct: 123 QLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVV 182

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  TL+ ALC+  Q++T V ML+ +  +  +P     T+L+   ++E  IE  + +  RM
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY--- 176
           L        +  ++++    K+  +E AL   ++ +  GF  +   Y TF+   C+    
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 177 --------------------------------GKIEEANCLMQEMENAGLKPYDETFNLL 204
                                           G++EEA  ++ +M + G  P   TFN L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I       R+EE+L    Q+  + + P    FN +I  LC+ G+   A  +     + G 
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+E+TY+ LI      G++ + L L  +ME      +   Y ++I  LC+  ++EEA++
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            F  M    +      + +L+    +      A  L  +M+SEGL+P+ 
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 168/369 (45%), Gaps = 1/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q G    + ++N +++ + K+ + +    I   M++    P+  T  TLI+
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC G +L+  +D+  ++  K  SP V     LI  + +       + L + M       
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  L  AL + ++M   G   ++  Y T I   C+  +IEEA  + 
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  G+     TFN LI+G  K K+I+++     QM+S  L P+   +N ++   C+ 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  +L      GF  + +TY  LI G  K G  Q  LK+   M  K + PT  AY
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMV 365
             ++ SL +   + +A   F+ M      P    Y+ +  G+    G   +A     EMV
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664

Query: 366 SEGLKPSTS 374
            +G  P  S
Sbjct: 665 DKGFIPEFS 673



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 6/343 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ R +  +G S  + +FN LI+ + K     L  R+++ M  +   P+E T  T
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D+L  +    C    I   ++I  + ++ RIEE   +  +M  + 
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I ++ ++    K + ++ A  +  +M+  G   N+  Y + +  YC+ G I++A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++ M   G +    T+  LI G  KA R + +L     M  + + P+  A+N +++ L
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
               N + A  +     + G  P+ +TY  +  G  +  G I+E      EM  K   P 
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             ++  L   L   G     D YF I     ++  VD+ ES V
Sbjct: 672 FSSFRMLAEGLLNLG----MDDYF-IRAIEIIMEKVDLRESDV 709



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 162/357 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG +    +F TL+    +    +   R+   MLE      + T+  LI+  CK G+
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +  + +       P  I   + +  + Q + +   + ++  M+++    D   Y++
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K   LE A  +  +M+ RG   +   + T I A C   ++EEA  L +++   G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   TFN+LI    K      +L   E+M +    P    +N +I  LC  G   +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L      G   + ITY+ +I G  K+  I+E  +++ +M+ + IS     + +LI  L
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C+  K+++A +    M S  L P    Y S++  + ++G+  KA  + E M + G +
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 2/229 (0%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G  A++ VY   +    E  K++    +  EM   G+KP   TFN L++   +A ++  +
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   E+M SR + P  + F  +++   E G+ + A  +    L+ G S  ++T + LI G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           Y K G +++ L    +       P    Y + ++ LCQ   +  A K   +M      P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS--ASTCRG 384
           V  Y  +V    + G   +A  +  +MV  G  P  +   +  A+ C G
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 177/360 (49%), Gaps = 3/360 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G + ++ ++N L+  +    R +    +   M      PN  T  TL++A C+ G+L 
Sbjct: 3   RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62

Query: 76  TY--VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               V  L R  G    P ++   S++  + +  R+E    +   M+R+ +  D ++Y+ 
Sbjct: 63  GAERVVSLMREEGN-AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 121

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  L  +L V+ EM +RG   +   +T+ I A C+ G +E+A  L+ +M   G
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+  + TF  LI+G  K   ++++L   E+M    + PS   +N +I   C+ G    A 
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++     K   P+ +TYS +I GY K G +    +L  +M  K + P    Y+SLI  L
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+  +L +A + F+ M    + P    Y +L+  H ++GN  KAL L +EM+ +G+ P  
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 361



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 50/403 (12%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L++FN++++ + K+ R +   +++  M+     P+  +  TL+S  CK G L   + + 
Sbjct: 80  NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 139

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +   P V+  TSLI    +   +E+ + L+ +M  + +  + + ++ ++    K 
Sbjct: 140 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 199

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L+ AL+  EEM K G   +   Y   I  YC+ G+++ A  L++EME   +KP   T+
Sbjct: 200 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 259

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + +I G  K   ++ +    ++M+ + +LP    ++ +IR LCE      A  +    L 
Sbjct: 260 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 319

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL-------- 313
            G  P+E TY+ LI G+ KEG +++ L L+ EM  K + P +  Y+ LI+ L        
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379

Query: 314 ------------------------------------------CQCGKLEEADKYFKIMKS 331
                                                     C  G ++EADK ++ M  
Sbjct: 380 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 439

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +      +Y  L+  H   GN  KAL   ++M+  G  P+++
Sbjct: 440 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST 482



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 170/357 (47%), Gaps = 2/357 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIR 62
            E A  V   +   G + + +++NTL+    ++   D   R+   M E     PN  T  
Sbjct: 26  LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFN 85

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           ++++ LCK G+++    + D +  +  +P V+   +L+    +   + E + +   M ++
Sbjct: 86  SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 145

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D + ++ +++A  K  NLE A+ +  +M +RG   N   +T  I  +C+ G +++A
Sbjct: 146 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 205

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
              ++EM   G++P    +N LI G  K  R++ +     +M ++++ P    ++ +I  
Sbjct: 206 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 265

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ GN   A  +    L KG  P+ ITYS LI G  +E  + +  +L+  M    + P 
Sbjct: 266 YCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 325

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
              YT+LI   C+ G +E+A      M    ++P V  Y  L+   L K  + K  H
Sbjct: 326 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN-GLSKSARTKEAH 381



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 179/386 (46%), Gaps = 15/386 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   + +RG  ++ ++F  LI    K    D      + M +    P+      
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK G++    +++  +  KR  P V+  +++I    +   ++    L ++ML+K 
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D I YS ++    + + L  A  ++E ML+ G   + F YTT I  +C+ G +E+A 
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS----------C 233
            L  EM   G+ P   T+++LI G +K+ R +E+     ++     +P           C
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 406

Query: 234 S-----AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           S     +   +++  C  G  K+A+ +    LD+ +  +   YS LI G+ + G +++ L
Sbjct: 407 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 466

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
             + +M     SP   +  SL+  L + G + EAD   + + +   +   +  ++L+ ++
Sbjct: 467 SFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLN 526

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTS 374
            ++GN    + +   M  +GL PS+ 
Sbjct: 527 RKEGNVDALIDVLCGMARDGLLPSSG 552



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 40/293 (13%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+R  +  +   Y+++V A      LE A+ V  +M   G + N+  Y T + A+C  G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 179 IEEAN---CLMQEMENAGLKPYDETFNLLIEGCAKAKRIE-------------------- 215
           ++ A     LM+E  NA  KP   TFN ++ G  KA R+E                    
Sbjct: 61  LDGAERVVSLMREEGNA--KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118

Query: 216 ---------------ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
                          ESL+   +M  R L+P    F  +I   C+ GN +QA  ++    
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++G   NE+T++ LI G+ K+G + + L    EM    I P++  Y +LI+  C+ G+++
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            A +  + M++  + P V  Y +++  + + GN   A  L ++M+ +G+ P  
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 291


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 181/398 (45%), Gaps = 35/398 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+  R ++ +    ++IS++TLI  + K     +  + +  M      PNE T  +LI 
Sbjct: 221 AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLID 280

Query: 67  ALCKGGQLQ-------------------TYVDMLD---------------RIHGKR-CSP 91
           A CK G L                    TY  +LD               R  GK   +P
Sbjct: 281 ANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
            +   T+LI   I+   +++ M L   M  K++  D + +  IV+       LE   ++ 
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM + G  AN  +YTT + AY + G   EA  L++EM + G +    TF  LI+G  K 
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKR 460

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             ++E++ Y  +M    L P+ + +  +I  LC+      A  +     DK   P++I Y
Sbjct: 461 GLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAY 520

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I G  K G  QE L +  +M    I   L AYTSL+  L QCG++++A K+   M  
Sbjct: 521 TAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIG 580

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             ++P   +   L+  H E GN  +A+ L  E+V +GL
Sbjct: 581 KGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 162/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G +  ++++NTLI    K    D    +++ M      P+  T   LI++ CK   
Sbjct: 158 MKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKG 217

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    +    +  K   P VI  ++LI  + +E  ++  +     M R  ++ +   YS 
Sbjct: 218 MLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSS 277

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K  NL  A ++ +EML+     N   YTT +   CE G + EA  L + M  AG
Sbjct: 278 LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P  + +  LI G  K + +++++    +M  + + P    +  ++  LC     ++  
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECK 397

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++T   + G   N + Y+ L+  Y K G   E + L  EM       T+  + +LI  L
Sbjct: 398 IIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGL 457

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G ++EA  YF  M  H L P V +Y +L+    +      A  L +EM  + + P 
Sbjct: 458 CKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPD 516



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 162/354 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S N  +H ++K+   DL    ++ M+     P   T   +I  +CK G + T   + +++
Sbjct: 99  SCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQM 158

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                +P ++   +LI    +   ++E + L + M       D I Y+ ++ +  K + +
Sbjct: 159 KKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGM 218

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A   + EM  +    N   Y+T I A C+ G ++ A     +M   GL P + T++ L
Sbjct: 219 LRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSL 278

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   KA  + E+    ++M+   +  +   +  ++  LCE G   +A  +       G 
Sbjct: 279 IDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGV 338

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN   Y+ LI G+ K   + + ++L+ EM  K I P +  + +++  LC   KLEE   
Sbjct: 339 TPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKI 398

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
               MK   +     IY +L+  + + GN+ +A++L EEM   G + +    C+
Sbjct: 399 IMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCA 452



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 154/341 (45%), Gaps = 5/341 (1%)

Query: 32  VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSP 91
           V+  SD  +++W        N+  P       L S L + G L+       R+   R  P
Sbjct: 41  VLPGSDVFEILWTT-----RNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLP 95

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                 + + R+ +    +      + M+   +      Y++++    K  ++ +A  ++
Sbjct: 96  KARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLF 155

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           E+M K G + +   Y T I  Y + G ++E+ CL +EM+  G +P   T+N LI    K 
Sbjct: 156 EQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKF 215

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           K +  +  +  +M  + L P+  +++ +I  LC+ G  + A          G  PNE TY
Sbjct: 216 KGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTY 275

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           S LI    K G + E   L  EM  + +   +  YT+L+  LC+ G + EA++ F+ M  
Sbjct: 276 SSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGK 335

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + P +  Y +L+  H++  +  KA+ L  EM  + +KP 
Sbjct: 336 AGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPD 376


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 183/381 (48%), Gaps = 5/381 (1%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y++Q    GF    I++NT ++ + ++D      ++   M++    P+  T   ++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK GQL+    +L+++  + C P +    +LI  +    R+EE + L +++  K + 
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   +++++ A  K+ +   AL ++EEM   G + +   Y T I   C  GK+ +A  L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++ME+ G      T+N +I+G  K  RIEE+    +QM  + +  +   FN +I  LC+
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A  ++   + +G  PN ITY+ ++  Y K+G+I++   +   M        +  
Sbjct: 509 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI+ LC+ G+ + A K  + M+   + P    Y  ++     + N   AL L  EM 
Sbjct: 569 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628

Query: 366 SEGLKPS--TSYLCSASTCRG 384
             G  P   T  +     CRG
Sbjct: 629 EVGEPPDALTYKIVFRGLCRG 649



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 176/409 (43%), Gaps = 37/409 (9%)

Query: 2   RLFEVAFDVCRYLEQR--GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           +LF+ A D+     Q   G     + +N L++V+ +  +  L+  +Y  M      P+  
Sbjct: 123 QLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVV 182

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  TL+ ALC+  Q++T V ML+ +  +  +P     T+L+   ++E  IE  + +  RM
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L        +  ++++    K+  +E AL   ++ +  GF  +   Y TF+   C+   +
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
             A  +M  M   G  P   T+N+++    K  ++EE+     QM+ R  LP  + FN +
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC     ++A  +      KG SP+  T++ LI    K G+    L+L+ EM+    
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422

Query: 300 SPTLPAYTSLISSLCQCGKL-----------------------------------EEADK 324
           +P    Y +LI +LC  GKL                                   EEA++
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            F  M    +      + +L+    +      A  L  +M+SEGL+P+ 
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNN 531



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 168/369 (45%), Gaps = 1/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q G    + ++N +++ + K+ + +    I   M++    P+  T  TLI+
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC G +L+  +D+  ++  K  SP V     LI  + +       + L + M       
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  L  AL + ++M   G   ++  Y T I   C+  +IEEA  + 
Sbjct: 425 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 484

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  G+     TFN LI+G  K K+I+++     QM+S  L P+   +N ++   C+ 
Sbjct: 485 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 544

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  +L      GF  + +TY  LI G  K G  Q  LK+   M  K + PT  AY
Sbjct: 545 GDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMV 365
             ++ SL +   + +A   F+ M      P    Y+ +  G+    G   +A     EMV
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664

Query: 366 SEGLKPSTS 374
            +G  P  S
Sbjct: 665 DKGFIPEFS 673



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 156/343 (45%), Gaps = 6/343 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ R +  +G S  + +FN LI+ + K     L  R+++ M  +   P+E T  T
Sbjct: 372 LEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNT 431

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D+L  +    C    I   ++I  + ++ RIEE   +  +M  + 
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I ++ ++    K + ++ A  +  +M+  G   N+  Y + +  YC+ G I++A 
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAA 551

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++ M   G +    T+  LI G  KA R + +L     M  + + P+  A+N +++ L
Sbjct: 552 DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
               N + A  +     + G  P+ +TY  +  G  +  G I+E      EM  K   P 
Sbjct: 612 FRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPE 671

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             ++  L   L   G     D YF I     ++  VD+ ES V
Sbjct: 672 FSSFRMLAEGLLNLG----MDDYF-IRAIEIIMEKVDLRESDV 709



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 162/357 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG +    +F TL+    +    +   R+   MLE      + T+  LI+  CK G+
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +  + +       P  I   + +  + Q + +   + ++  M+++    D   Y++
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K   LE A  +  +M+ RG   +   + T I A C   ++EEA  L +++   G
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   TFN+LI    K      +L   E+M +    P    +N +I  LC  G   +A 
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L      G   + ITY+ +I G  K+  I+E  +++ +M+ + IS     + +LI  L
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C+  K+++A +    M S  L P    Y S++  + ++G+  KA  + E M + G +
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 2/229 (0%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G  A++ VY   +    E  K++    +  EM   G+KP   TFN L++   +A ++  +
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   E+M SR + P  + F  +++   E G+ + A  +    L+ G S  ++T + LI G
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           Y K G +++ L    +       P    Y + ++ LCQ   +  A K   +M      P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS--ASTCRG 384
           V  Y  +V    + G   +A  +  +MV  G  P  +   +  A+ C G
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 170/366 (46%), Gaps = 35/366 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+    ++++G    + +FN ++ +  K ++ + VW +Y  M          T   +I+
Sbjct: 185 AFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMIN 244

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L+   D +  +      P V+                                
Sbjct: 245 VLCKEGKLKKAKDFIGSMENLGVKPNVV-------------------------------- 272

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ +++       +E A +V + M  RG   +S+ Y + I   C+ GK+EEA+ ++
Sbjct: 273 ---TYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGIL 329

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M+  GL P   T+N LI+G      + ++  Y ++M+ R +LP+ S +N +I  L   
Sbjct: 330 EKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLE 389

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A+GM+    D G  P+ ITY+ LI GY + G  ++   L+ EM  K I PTL  Y
Sbjct: 390 GKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTY 449

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI  L +  +++ AD  F+ +      P + ++ +L+  H   GN  +A  L +EM  
Sbjct: 450 TSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDK 509

Query: 367 EGLKPS 372
             + P 
Sbjct: 510 RNIVPD 515



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 140/279 (50%)

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
           IV   LI    + +R ++       M  K ++     ++ ++   +K+   E+  V+Y E
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M +    +  + +   I   C+ GK+++A   +  MEN G+KP   T+N +I G     R
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           +E +    + M +R + P    +  +I  +C+ G  ++A+G+L    + G  P  +TY+ 
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI GY  +G++ +      EM  ++I PT+  Y  LI +L   GK++EAD   K M    
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +VP    Y  L+  +   GN  KA +L +EM+S+G++P+
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPT 445



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 170/368 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D    +E  G   +++++NT+IH      R +    +   M      P+  T  +LIS
Sbjct: 255 AKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLIS 314

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +CKGG+L+    +L+++      P  +   +LI     +  + +       M+R+ ++ 
Sbjct: 315 GMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILP 374

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+L+++A      ++ A  + ++M   G   +S  Y   I  YC  G  ++A  L 
Sbjct: 375 TVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLH 434

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G++P   T+  LI   +K  R++ +    E+++     P    FN +I   C  
Sbjct: 435 DEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCAN 494

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN  +A  +L     +   P+E+TY+ L+ G  +EG+++E  +L  EM+ + I P   +Y
Sbjct: 495 GNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISY 554

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LIS   + G + +A      M S    P +  Y +L+    +      A  L +EMVS
Sbjct: 555 NTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVS 614

Query: 367 EGLKPSTS 374
           +G+ P  S
Sbjct: 615 KGITPDDS 622



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 156/336 (46%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V   ++ RG      ++ +LI  + K  + +    I + M E    P   T  TLI   C
Sbjct: 293 VLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYC 352

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G L       D +  +   P V     LI  +  E +++E   ++K M    ++ D+I
Sbjct: 353 NKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSI 412

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y++++    +  N + A  +++EM+ +G       YT+ I    +  +++ A+ L +++
Sbjct: 413 TYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKI 472

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G  P    FN LI+G      ++ + +  ++M  R ++P    +N +++  C  G  
Sbjct: 473 IREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKV 532

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +L     +G  P+ I+Y+ LI GY+K G+I +   +  EM     +PTL  Y +L
Sbjct: 533 EEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNAL 592

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           I  LC+  + + A++  K M S  + P    Y SL+
Sbjct: 593 IQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLI 628



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 137/280 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     + +R    ++ ++N LIH +    + D    + + M ++   P+  T   LI+
Sbjct: 360 AFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILIN 419

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G  +   ++ D +  K   P ++  TSLI  + +  R++    L ++++R+    
Sbjct: 420 GYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASP 479

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I ++ ++       NL+ A  + +EM KR    +   Y T +   C  GK+EEA  L+
Sbjct: 480 DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM+  G++P   ++N LI G +K   I ++ +  ++M+S    P+   +N +I+ LC+ 
Sbjct: 540 KEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKN 599

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
                A  +L   + KG +P++ TY  LI G  K  +  E
Sbjct: 600 QQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSE 639



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 103/215 (47%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           + +S V+   I A CE  + ++A      M+  G+ P  ETFN ++    K  + E    
Sbjct: 163 TKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWV 222

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
              +M   K+  +   FN MI  LC+ G  K+A   +    + G  PN +TY+ +I GY 
Sbjct: 223 LYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYC 282

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
             G ++    +   M+ + + P    Y SLIS +C+ GKLEEA    + MK   L+P   
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            Y +L+  +  KG+  KA    +EMV   + P+ S
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVS 377



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 101/211 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G   +L+++ +LI+V++K +R      +++ ++     P+      LI 
Sbjct: 430 AFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID 489

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G L     +L  +  +   P  +   +L+    +E ++EE   LLK M R+ +  
Sbjct: 490 GHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I+Y+ ++    K  ++  A  + +EML  GF+     Y   I   C+  + + A  L+
Sbjct: 550 DHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELL 609

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           +EM + G+ P D T+  LIEG  K     E+
Sbjct: 610 KEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 113/230 (49%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++N LI+   +       + ++  M+     P   T  +LI  L K  +++   D+ ++
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           I  +  SP +I+  +LI        ++    LLK M ++N++ D + Y+ ++  + +   
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E A  + +EM +RG   +   Y T I  Y + G I +A  +  EM + G  P   T+N 
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           LI+G  K ++ + +    ++M+S+ + P  S +  +I  + +  ++ +A+
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEAS 641


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 177/360 (49%), Gaps = 3/360 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G + ++ ++N L+  +    R +    +   M      PN  T  TL++A C+ G+L 
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 76  TY--VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               V  L R  G    P ++   S++  + +  R+E    +   M+R+ +  D ++Y+ 
Sbjct: 205 GAERVVSLMREEGN-AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  L  +L V+ EM +RG   +   +T+ I A C+ G +E+A  L+ +M   G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+  + TF  LI+G  K   ++++L   E+M    + PS   +N +I   C+ G    A 
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++     K   P+ +TYS +I GY K G +    +L  +M  K + P    Y+SLI  L
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+  +L +A + F+ M    + P    Y +L+  H ++GN  KAL L +EM+ +G+ P  
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 50/403 (12%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L++FN++++ + K+ R +   +++  M+     P+  +  TL+S  CK G L   + + 
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 281

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +   P V+  TSLI    +   +E+ + L+ +M  + +  + + ++ ++    K 
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L+ AL+  EEM K G   +   Y   I  YC+ G+++ A  L++EME   +KP   T+
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + +I G  K   ++ +    ++M+ + +LP    ++ +IR LCE      A  +    L 
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL-------- 313
            G  P+E TY+ LI G+ KEG +++ L L+ EM  K + P +  Y+ LI+ L        
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 314 ------------------------------------------CQCGKLEEADKYFKIMKS 331
                                                     C  G ++EADK ++ M  
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +      +Y  L+  H   GN  KAL   ++M+  G  P+++
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST 624



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 180/382 (47%), Gaps = 10/382 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE--NIRYPNEATI 61
            E A  V   +   G + + +++NTL+    ++   D   R+   M E  N + PN  T 
Sbjct: 168 LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAK-PNLVTF 226

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            ++++ LCK G+++    + D +  +  +P V+   +L+    +   + E + +   M +
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++ D + ++ +++A  K  NLE A+ +  +M +RG   N   +T  I  +C+ G +++
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A   ++EM   G++P    +N LI G  K  R++ +     +M ++++ P    ++ +I 
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ GN   A  +    L KG  P+ ITYS LI G  +E  + +  +L+  M    + P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               YT+LI   C+ G +E+A      M    ++P V  Y  L+   L K  + K  H  
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN-GLSKSARTKEAHRL 525

Query: 362 ------EEMVSEGLKPSTSYLC 377
                 E+ V + +K     LC
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLC 547



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 179/386 (46%), Gaps = 15/386 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   + +RG  ++ ++F  LI    K    D      + M +    P+      
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK G++    +++  +  KR  P V+  +++I    +   ++    L ++ML+K 
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D I YS ++    + + L  A  ++E ML+ G   + F YTT I  +C+ G +E+A 
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS----------C 233
            L  EM   G+ P   T+++LI G +K+ R +E+     ++     +P           C
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548

Query: 234 S-----AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           S     +   +++  C  G  K+A+ +    LD+ +  +   YS LI G+ + G +++ L
Sbjct: 549 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 608

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
             + +M     SP   +  SL+  L + G + EAD   + + +   +   +  ++L+ ++
Sbjct: 609 SFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLN 668

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTS 374
            ++GN    + +   M  +GL PS+ 
Sbjct: 669 RKEGNVDALIDVLCGMARDGLLPSSG 694



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 40/312 (12%)

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +L  + +  +      L  MLR  +  +   Y+++V A      LE A+ V  +M   G 
Sbjct: 124 VLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGC 183

Query: 160 SANSFVYTTFIGAYCEYGKIEEAN---CLMQEMENAGLKPYDETFNLLIEGCAKAKRIE- 215
           + N+  Y T + A+C  G+++ A     LM+E  NA  KP   TFN ++ G  KA R+E 
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--KPNLVTFNSMVNGLCKAGRMEG 241

Query: 216 ----------------------------------ESLSYCEQMMSRKLLPSCSAFNEMIR 241
                                             ESL+   +M  R L+P    F  +I 
Sbjct: 242 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ GN +QA  ++    ++G   NE+T++ LI G+ K+G + + L    EM    I P
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           ++  Y +LI+  C+ G+++ A +  + M++  + P V  Y +++  + + GN   A  L 
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLN 421

Query: 362 EEMVSEGLKPST 373
           ++M+ +G+ P  
Sbjct: 422 QKMLKKGVLPDA 433



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 2/245 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ ++ A +   +L SA      ML+ G + N + Y   + A C  G++EEA  ++ +M
Sbjct: 120 AYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGN 248
             AG  P   T+N L+    +A  ++ +      M       P+   FN M+  LC+ G 
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +    + +G +P+ ++Y+ L+ GY K G + E L ++ EM  + + P +  +TS
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTS 298

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI + C+ G LE+A      M+   L      + +L+    +KG    AL   EEM   G
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358

Query: 369 LKPST 373
           ++PS 
Sbjct: 359 IQPSV 363



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 2/144 (1%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           PS  A+N ++  L +  +   A   L+  L  G +PN  TY+ L+      G ++E + +
Sbjct: 116 PSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHL 349
             +M     +P    Y +L+++ C+ G+L+ A++   +M+   +  P +  + S+V    
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 350 EKGNKAKALHLCEEMVSEGLKPST 373
           + G    A  + +EMV EGL P  
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDV 258


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 174/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A +     E  G   ++ ++ T+I+ + K         +++ M E    PN  T   
Sbjct: 181 FAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNI 240

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +LCK   +   +D+   +  KR SP +    SLI  +    R +E   LL  M   N
Sbjct: 241 LIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN 300

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   ++++V A  K   +  A  V++ M + G   +   Y++ +  Y    +I EA 
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEAR 360

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M   G KP   ++N+LI+G  KAKRI+E+     +M+ + L P    +N +I  L
Sbjct: 361 KLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGL 420

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  +       G  P+  TYS L+ G+ KEG + +  +L+  M+   + P +
Sbjct: 421 CQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDI 480

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI ++C+ G L++A K F  +    L+P V IY +++    ++G   +AL     
Sbjct: 481 AMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRN 540

Query: 364 MVSEGLKPS 372
           M  +G  P 
Sbjct: 541 MEGDGCPPD 549



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 168/363 (46%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + +E  G S  + + + LI   +   R DL + ++  M++    P+  T  TLI+ LCK 
Sbjct: 119 KQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKV 178

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+    V+  D      C P V   T++I  + +         L K+M       + + Y
Sbjct: 179 GKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTY 238

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++ +  K + +  AL ++  M  +  S + F Y + I   C + + +EA+ L+ EM +
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   TFN+L++   K  ++ E+    + M    + P    ++ ++          +
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE 358

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    + KG  P+  +Y+ LI GY K   I E  +L+ EM ++ ++P    Y +LI 
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LCQ G+L EA   FK M S+  +P +  Y  L+    ++G   KA  L   M S  LKP
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP 478

Query: 372 STS 374
             +
Sbjct: 479 DIA 481



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 1/163 (0%)

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD-KGFSPNEIT 270
           + I+++L+    M+ R+ LP    F +++  + + G    A   L+  ++  G SP+  T
Sbjct: 73  RNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYT 132

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            S LI  ++    +     ++ +M    + P    + +LI+ LC+ GK  +A ++F   +
Sbjct: 133 LSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE 192

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +    P V  Y +++    + G    A  L ++M   G +P+ 
Sbjct: 193 ASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNV 235


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 177/360 (49%), Gaps = 3/360 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G + ++ ++N L+  +    R +    +   M      PN  T  TL++A C+ G+L 
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 76  TY--VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               V  L R  G    P ++   S++  + +  R+E    +   M+R+ +  D ++Y+ 
Sbjct: 205 GAERVVSLMREEGN-AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNT 263

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  L  +L V+ EM +RG   +   +T+ I A C+ G +E+A  L+ +M   G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+  + TF  LI+G  K   ++++L   E+M    + PS   +N +I   C+ G    A 
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 383

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++     K   P+ +TYS +I GY K G +    +L  +M  K + P    Y+SLI  L
Sbjct: 384 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 443

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+  +L +A + F+ M    + P    Y +L+  H ++GN  KAL L +EM+ +G+ P  
Sbjct: 444 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 503



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 50/403 (12%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L++FN++++ + K+ R +   +++  M+     P+  +  TL+S  CK G L   + + 
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 281

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +   P V+  TSLI    +   +E+ + L+ +M  + +  + + ++ ++    K 
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L+ AL+  EEM K G   +   Y   I  YC+ G+++ A  L++EME   +KP   T+
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + +I G  K   ++ +    ++M+ + +LP    ++ +IR LCE      A  +    L 
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL-------- 313
            G  P+E TY+ LI G+ KEG +++ L L+ EM  K + P +  Y+ LI+ L        
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 314 ------------------------------------------CQCGKLEEADKYFKIMKS 331
                                                     C  G ++EADK ++ M  
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 581

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +      +Y  L+  H   GN  KAL   ++M+  G  P+++
Sbjct: 582 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST 624



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 180/382 (47%), Gaps = 10/382 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE--NIRYPNEATI 61
            E A  V   +   G + + +++NTL+    ++   D   R+   M E  N + PN  T 
Sbjct: 168 LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAK-PNLVTF 226

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            ++++ LCK G+++    + D +  +  +P V+   +L+    +   + E + +   M +
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++ D + ++ +++A  K  NLE A+ +  +M +RG   N   +T  I  +C+ G +++
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A   ++EM   G++P    +N LI G  K  R++ +     +M ++++ P    ++ +I 
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ GN   A  +    L KG  P+ ITYS LI G  +E  + +  +L+  M    + P
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQP 466

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               YT+LI   C+ G +E+A      M    ++P V  Y  L+   L K  + K  H  
Sbjct: 467 DEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLIN-GLSKSARTKEAHRL 525

Query: 362 ------EEMVSEGLKPSTSYLC 377
                 E+ V + +K     LC
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLC 547



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 40/312 (12%)

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +L  + +  +      L  MLR  +  +   Y+++V A      LE A+ V  +M   G 
Sbjct: 124 VLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGC 183

Query: 160 SANSFVYTTFIGAYCEYGKIEEAN---CLMQEMENAGLKPYDETFNLLIEGCAKAKRIE- 215
           + N+  Y T + A+C  G+++ A     LM+E  NA  KP   TFN ++ G  KA R+E 
Sbjct: 184 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--KPNLVTFNSMVNGLCKAGRMEG 241

Query: 216 ----------------------------------ESLSYCEQMMSRKLLPSCSAFNEMIR 241
                                             ESL+   +M  R L+P    F  +I 
Sbjct: 242 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ GN +QA  ++    ++G   NE+T++ LI G+ K+G + + L    EM    I P
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 361

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           ++  Y +LI+  C+ G+++ A +  + M++  + P V  Y +++  + + GN   A  L 
Sbjct: 362 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLN 421

Query: 362 EEMVSEGLKPST 373
           ++M+ +G+ P  
Sbjct: 422 QKMLKKGVLPDA 433



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 169/368 (45%), Gaps = 15/368 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + QRG    +++F +LIH   K+   +    +   M E     NE T   LI   CK G 
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   +  ++ +      P V+   +LI    +  R++    L++ M  K +  D + YS 
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    K+ NL+SA  + ++MLK+G   ++  Y++ I   CE  ++ +A  L + M   G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P + T+  LI+G  K   +E++LS  ++M+ + +LP    ++ +I  L +    K+A+
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 254 GMLTLALDKGFSPNEITYSHL---------------IGGYAKEGEIQEVLKLYYEMEYKS 298
            +L     +   P+ I Y  L               + G+  +G ++E  K+Y  M  ++
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
                  Y+ LI   C+ G + +A  + K M      P      SLV    E+G   +A 
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 359 HLCEEMVS 366
           +  +++++
Sbjct: 644 NAIQDLLT 651



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 169/364 (46%), Gaps = 15/364 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   + +RG  ++ ++F  LI    K    D      + M +    P+      
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK G++    +++  +  KR  P V+  +++I    +   ++    L ++ML+K 
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D I YS ++    + + L  A  ++E ML+ G   + F YTT I  +C+ G +E+A 
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS----------C 233
            L  EM   G+ P   T+++LI G +K+ R +E+     ++     +P           C
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548

Query: 234 S-----AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           S     +   +++  C  G  K+A+ +    LD+ +  +   YS LI G+ + G +++ L
Sbjct: 549 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKAL 608

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
             + +M     SP   +  SL+  L + G + EAD   + + +   +   +  ++L+ ++
Sbjct: 609 SFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLN 668

Query: 349 LEKG 352
            ++G
Sbjct: 669 RKEG 672



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 2/245 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ ++ A +   +L SA      ML+ G + N + Y   + A C  G++EEA  ++ +M
Sbjct: 120 AYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGN 248
             AG  P   T+N L+    +A  ++ +      M       P+   FN M+  LC+ G 
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +    + +G +P+ ++Y+ L+ GY K G + E L ++ EM  + + P +  +TS
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTS 298

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI + C+ G LE+A      M+   L      + +L+    +KG    AL   EEM   G
Sbjct: 299 LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358

Query: 369 LKPST 373
           ++PS 
Sbjct: 359 IQPSV 363



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 2/174 (1%)

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           F+ LI   A   R   + +      S    PS  A+N ++  L +  +   A   L+  L
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSD-ASLPSARRFLSSML 144

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G +PN  TY+ L+      G ++E + +  +M     +P    Y +L+++ C+ G+L+
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 321 EADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            A++   +M+   +  P +  + S+V    + G    A  + +EMV EGL P  
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDV 258


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 184/361 (50%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F +  D C+ +E  G + ++ + N +I+   +  +    + +   +++    P+  T  T
Sbjct: 81  FNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 140

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC   ++   V ++ R+    C P V+   S++  I +       + LL++M  +N
Sbjct: 141 LINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS I+ +  +   +++A+ +++EM  +G  ++   Y + +G  C+ GK  +  
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGV 260

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M +  + P   TFN+LI+   K  +++E+    ++M+++ + P+   +N ++   
Sbjct: 261 QLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGY 320

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +AN ML L +    SP+ +T++ LI GY K   + E +KL+ ++  + +    
Sbjct: 321 CMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANT 380

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ L+   CQ GKLE A++ F+ M S  ++P V  Y  L+    + G   KAL + E+
Sbjct: 381 VTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFED 440

Query: 364 M 364
           +
Sbjct: 441 L 441



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 187/371 (50%), Gaps = 1/371 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++ E    V R +E  G   +++++N++++ + KS    L   + + M E     +  T 
Sbjct: 150 KVSEAVVLVARMVEN-GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY 208

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I +LC+ G +   + +   +  K     ++   SL+  + +  +  +G+ LLK M  
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +I + I +++++   VK   L+ A  +Y+EM+ +G S N+  Y + +  YC   ++ E
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           AN ++  M      P   TF  LI+G  K KR++E +    ++  R L+ +   ++ +++
Sbjct: 329 ANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G  + A  +    +  G  P+ +TY  L+ G    G++++ L+++ +++   ++ 
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL 448

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  YT +I  +C+ GK+E+A   F  +    + P V  Y  ++    +KG+ ++A  L 
Sbjct: 449 DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508

Query: 362 EEMVSEGLKPS 372
            +M  +G +P+
Sbjct: 509 RKMEEDGNEPN 519



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 159/328 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  + + +E +G   SL+++N+L+  + K+ + +   ++ + M      PN  T   
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    K G+LQ   ++   +  K  SP  I   SL+     + R+ E   +L  M+R N
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + ++ ++    K++ ++  + ++ ++ KRG  AN+  Y+  +  +C+ GK+E A 
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L QEM + G+ P   T+ +L++G     ++E++L   E +   K+      +  +I  +
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  + A  +      KG  PN +TY+ +I G  K+G + E   L  +ME     P  
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKS 331
             Y +LI +  + G L  + K  + MKS
Sbjct: 521 CTYNTLIRAHLRDGDLTASAKLIEEMKS 548



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 149/292 (51%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I+FN LI V  K  +      +Y+ M+     PN  T  +L+   C   +L    +ML
Sbjct: 274 NVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +    CSP ++  TSLI    + +R++EGM L +++ ++ ++ +T+ YS++V    + 
Sbjct: 334 DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQS 393

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             LE A  +++EM+  G   +   Y   +   C+ GK+E+A  + ++++ + +      +
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMY 453

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++IEG  K  ++E++ +    +  + + P+   +  MI  LC+ G+  +AN +L    +
Sbjct: 454 TIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            G  PN+ TY+ LI  + ++G++    KL  EM+    S    +   +I  L
Sbjct: 514 DGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 128/281 (45%), Gaps = 9/281 (3%)

Query: 102 RIIQEERIEEGMV---------LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           R+   ER+  G+V         L + M+R   +   + +S         +     L   +
Sbjct: 30  RVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCK 89

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
           +M   G + N +     I  +C   K   A  ++ ++   G +P   TFN LI G     
Sbjct: 90  KMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLES 149

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           ++ E++    +M+     P+   +N ++  +C+ G+   A  +L    ++    +  TYS
Sbjct: 150 KVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYS 209

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            +I    ++G I   + L+ EME K I  +L  Y SL+  LC+ GK  +  +  K M S 
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++P V  +  L+ + +++G   +A  L +EM+++G+ P+T
Sbjct: 270 KIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNT 310



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 104/226 (46%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A  V  +++K G+  ++  + T I   C   K+ EA  L+  M   G +P   T+N ++ 
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K+     +L    +M  R +      ++ +I  LC  G    A  +      KG   
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + +TY+ L+GG  K G+  + ++L  +M  + I P +  +  LI    + GKL+EA++ +
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K M +  + P    Y SL+  +  +   ++A ++ + MV     P 
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 4/321 (1%)

Query: 57  NEATIRTLISALCKGGQLQTYVD-MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           NE  I  L++ LC   ++   +D +L R+    C P V+   +L+  +  E+R+EE + L
Sbjct: 124 NEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALEL 183

Query: 116 LKRMLRK---NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           L  M      N   + + Y+ I+    K + ++ A  V + M+ +G   +   Y+T I  
Sbjct: 184 LHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDG 243

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+   ++ A  ++Q M + G+KP   T+N +I+G  KA+ ++ +    + M+ + + P 
Sbjct: 244 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 303

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +N +I  LC+     +A+G+L   +DK   P+  TY+ LI GY   GE +EV++   
Sbjct: 304 VVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLE 363

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM  + + P +  Y+ L+  LC+ GK  EA K F  M    + P V IY  L+  +  +G
Sbjct: 364 EMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423

Query: 353 NKAKALHLCEEMVSEGLKPST 373
             A    L + MV+ G+ P+ 
Sbjct: 424 AIADLTDLLDLMVANGISPNN 444



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 171/364 (46%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V +++  +G    ++++NT+I  + K+   D    + QHM++    P+  T   LI    
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G+ +  V  L+ ++ +   P V+  + L+  + +  +  E   +   M+RK +  +  
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y ++++       +     + + M+  G S N++++   + AY +   I+EA  +   M
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              GL P   T+ +LI+   K  R+++++    QM++  + P+   FN ++  LC     
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW 530

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +     D+G  PN + ++ ++     EG++    +L   ME   + P + +Y +L
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTL 590

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I   C  G+ +EA +   +M S  L P +  Y++L+  + + G    A  L  EM+ +G+
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650

Query: 370 KPST 373
            P  
Sbjct: 651 TPGA 654



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 165/363 (45%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V +++  +G    ++++NT+I  + K+   D    + QHM++    P+  T  T+I  LC
Sbjct: 256 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC 315

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K   +     +L  +  K   P +     LI   +     +E +  L+ M  + +  D +
Sbjct: 316 KAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVV 375

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            YSL++    K      A  ++  M+++G   N  +Y   +  Y   G I +   L+  M
Sbjct: 376 TYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLM 435

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G+ P +  FN+++   AK   I+E++    +M    L P    +  +I  LC+ G  
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRV 495

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A       ++ G +PN + ++ L+ G       ++  +L++EM  + + P +  + ++
Sbjct: 496 DDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI 555

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + +LC  G++  A +    M+   + P V  Y +L+G H   G   +A  L + MVS GL
Sbjct: 556 MCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGL 615

Query: 370 KPS 372
           KP 
Sbjct: 616 KPD 618



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 166/365 (45%), Gaps = 3/365 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR---YPNEATIRTLISAL 68
           R + + G   +++S NTL+  +    R +    +   M E+      PN  T  T+I  L
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK   +     +L  +  K     V+  +++I  + + + ++    +L+ M+ K +  D 
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y+ I+    K + ++ A  V + M+ +G   +   Y T I   C+   ++ A+ ++Q 
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M +  +KP  +T+N LI G       +E +   E+M +R L P    ++ ++  LC+ G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +    + KG  PN   Y  L+ GYA  G I ++  L   M    ISP    +  
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           ++ +  +   ++EA   F  M  H L P V  Y  L+    + G    A+    +M+++G
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509

Query: 369 LKPST 373
           + P++
Sbjct: 510 VTPNS 514



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 173/359 (48%), Gaps = 8/359 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++NT+I  + K+   D    + QHM++     +  T  T+I  LCK   +     +L
Sbjct: 198 NVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVL 257

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K   P V+   ++I  + + + ++    +L+ M+ K +  D + Y+ I+    K 
Sbjct: 258 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKA 317

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           + ++ A  V + M+ +    +   Y   I  Y   G+ +E    ++EM   GL P   T+
Sbjct: 318 QAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTY 377

Query: 202 NLLIEGCAKAKRIEES--LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           +LL++   K  +  E+  + YC  M+ + + P+ + +  ++      G       +L L 
Sbjct: 378 SLLLDYLCKNGKCTEARKIFYC--MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLM 435

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           +  G SPN   ++ ++  YAK+  I E + ++  M    +SP +  Y  LI +LC+ G++
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRV 495

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLV-GI-HLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++A   F  M +  + P   ++ SLV G+  +++  KA+ L    EM  +G++P+  + 
Sbjct: 496 DDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF--EMWDQGVRPNVVFF 552



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/407 (21%), Positives = 173/407 (42%), Gaps = 38/407 (9%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +V R LE+   RG    +++++ L+  + K+ +     +I+  M+     PN      L+
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
                 G +    D+LD +     SP   +   ++    ++  I+E M +  RM +  + 
Sbjct: 417 HGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLS 476

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN-- 183
            D + Y +++ A  K+  ++ A++ + +M+  G + NS V+ + +   C   + E+A   
Sbjct: 477 PDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEEL 536

Query: 184 -----------------------C----------LMQEMENAGLKPYDETFNLLIEGCAK 210
                                  C          L+  ME  G++P   ++N LI G   
Sbjct: 537 FFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCL 596

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           A R +E+    + M+S  L P   +++ ++R  C+ G    A  +    L KG +P  +T
Sbjct: 597 AGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVT 656

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           YS ++ G        E  +LY  M        +  Y  +++ LC+   ++EA K F+ + 
Sbjct: 657 YSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLC 716

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           S  L P +  +  ++ +  + G K  A+ L   + S GL P+    C
Sbjct: 717 SKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYC 763



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 136/309 (44%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G + + + FN+L++ +   DR +    ++  M +    PN     T++  LC  GQ+   
Sbjct: 509 GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVA 568

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++D +      P VI   +LI       R +E   LL  M+   +  D I+Y  ++  
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRG 628

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +++A  ++ EML++G +  +  Y+T +       +  EA  L   M  +G +  
Sbjct: 629 YCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWD 688

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N+++ G  K   ++E+    + + S+ L P+   F  MI  L + G  K A  +  
Sbjct: 689 IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFA 748

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  PN +TY  ++    +EG + E   L+  ME    +P      ++I SL   G
Sbjct: 749 SIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRG 808

Query: 318 KLEEADKYF 326
           ++  A  Y 
Sbjct: 809 EIMRAGAYL 817



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/355 (19%), Positives = 151/355 (42%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + A  +   + Q G S  ++++  LI  + K  R D     +  M+ +   PN     
Sbjct: 459 MIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFN 518

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +L+  LC   + +   ++   +  +   P V+   +++  +  E ++     L+  M R 
Sbjct: 519 SLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV 578

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + I+Y+ ++         + A  + + M+  G   +   Y T +  YC+ G+I+ A
Sbjct: 579 GVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNA 638

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            CL +EM   G+ P   T++ +++G    +R  E+      M+          +N ++  
Sbjct: 639 YCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNG 698

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A  +      K   PN IT++ +I    K G  ++ + L+  +    + P 
Sbjct: 699 LCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPN 758

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           +  Y  ++ ++ Q G L+E D  F  M+     P   +  +++   L +G   +A
Sbjct: 759 VVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/298 (21%), Positives = 104/298 (34%), Gaps = 81/298 (27%)

Query: 166 YTTFIGAYCEYGKIEEA------------------------------------NCLMQEM 189
           Y+   G +C  G+IE                                      + L++ M
Sbjct: 93  YSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRM 152

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR---KLLPSCSAFNEMIRRLCEC 246
              G  P   + N L++G    KR+EE+L     M         P+   +N +I  LC+ 
Sbjct: 153 PEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKA 212

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-------EGEIQEVLK---------- 289
               +A G+L   +DKG   + +TYS +I G  K       EG +Q ++           
Sbjct: 213 QAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTY 272

Query: 290 ------------------LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
                             +   M  K + P +  Y ++I  LC+   ++ AD   + M  
Sbjct: 273 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID 332

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-------SYLCSASTC 382
             + P +  Y  L+  +L  G   + +   EEM + GL P          YLC    C
Sbjct: 333 KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 122/302 (40%), Gaps = 40/302 (13%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   ++IS+NTLI     + R D   ++   M+     P+  +  TL+   CK G 
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTG- 633

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                                             RI+    L + MLRK +    + YS 
Sbjct: 634 ----------------------------------RIDNAYCLFREMLRKGVTPGAVTYST 659

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+      R    A  +Y  M+K G   + + Y   +   C+   ++EA  + Q + +  
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKD 719

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P   TF ++I+   K  R ++++     + S  L+P+   +  M++ + + G   + +
Sbjct: 720 LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779

Query: 254 GMLTLALDK-GFSPNEITYSHLIGGYAKEGEIQEV---LKLYYEMEYKSISPTLPAYTSL 309
            +  LA++K G +P+ +  + +I      GEI      L    EM +   + T     SL
Sbjct: 780 NLF-LAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISL 838

Query: 310 IS 311
            S
Sbjct: 839 FS 840


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 173/351 (49%), Gaps = 7/351 (1%)

Query: 31  HVVTKSDRN---DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
           H++ +  RN    LV R+++H+      PN  T   +I  LCK G+L     +  R+   
Sbjct: 173 HILLRLARNRQGGLVRRLFEHL----PAPNVFTFNIVIDFLCKQGELVEARALFVRMKAM 228

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
            CSP V+   SLI    +   +EE  +L+  M +     D + Y+ ++    K   +E A
Sbjct: 229 GCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKA 288

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
              + EM + G  AN    +TF+ A+C+ G + EA  L  +M   G+ P + T+  L++G
Sbjct: 289 YSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDG 348

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             KA R+++++   ++M+ + L+P+   +  M+  LC+ G    A+ +L+L    G   N
Sbjct: 349 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKAN 408

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           E+ Y+ LI G+      +  L L  EM+ K +   +  Y +LI  LC+  KL+EA     
Sbjct: 409 ELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLH 468

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            M    L P   IY +++    + G +++A+ L  ++   GL+P+    C+
Sbjct: 469 KMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCA 519



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 164/350 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG   +  ++ +L+    K+ R D    +   M+     PN  T   ++  LCK G++  
Sbjct: 333 RGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAV 392

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+L  +         ++ T+LI      +  E  + LL  M  K M  D   Y  +++
Sbjct: 393 ADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIW 452

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K++ L+ A  +  +M   G   N+ +YTT + A+ + GK  EA  L+ ++ ++GL+P
Sbjct: 453 GLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQP 512

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  LI+G  KA  I E++S+ ++M    L P+   +  +I   C+ G+  +A  ++
Sbjct: 513 NVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLM 572

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +DKG S +++ Y+ LI G+ K+G++Q    L  +M    +   L  YT  IS  C  
Sbjct: 573 NEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNM 632

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             ++EA      M    + P    Y  L+  + + GN  +A  L  EM S
Sbjct: 633 NMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 170/358 (47%), Gaps = 4/358 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G S  ++++N+LI    K    + V  +   M ++    +  T   LI+   K G 
Sbjct: 225 MKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGW 284

Query: 74  LQTYVDMLDRIHGKRCSPM--VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           ++        +  KR   M  V+  ++ +    +E  + E M L  +M  + M+ +   Y
Sbjct: 285 IEKAYSYFGEM--KRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTY 342

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +V    K   L+ A+V+ +EM+ +G   N   YT  +   C+ GK+  A+ ++  ME 
Sbjct: 343 TSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMER 402

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           AG+K  +  +  LI G    K  E +L    +M ++ +    S +  +I  LC+     +
Sbjct: 403 AGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDE 462

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L    D G  PN + Y+ ++  + K G+  E + L +++    + P +  Y +LI 
Sbjct: 463 AKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALID 522

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            LC+ G + EA  +F  M+   L P V +Y +L+    + G+ +KA+HL  EMV +G+
Sbjct: 523 GLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGM 580



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 165/357 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G +  ++++N LI+  +K    +  +  +  M       N  T+ T + A CK G 
Sbjct: 260 MRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGL 319

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +  ++  +   P     TSL+    +  R+++ +VLL  M+ + ++ + + Y++
Sbjct: 320 VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 379

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K   +  A  V   M + G  AN  +YTT I  +      E A  L+ EM+N G
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++     +  LI G  K ++++E+ S   +M    L P+   +  ++    + G   +A 
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV 499

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L    D G  PN +TY  LI G  K G I E +  + +M    + P +  YT+LI   
Sbjct: 500 ALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGF 559

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C+ G L +A      M    +     +Y SL+  H+++G+   A  L  +M+  GL+
Sbjct: 560 CKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQ 616



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 143/312 (45%), Gaps = 4/312 (1%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL+S L   G L   V  L R+   R  P       ++LR+ +    + G+V  +R+   
Sbjct: 138 TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNR--QGGLV--RRLFEH 193

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               +   +++++    K   L  A  ++  M   G S +   Y + I  Y + G++EE 
Sbjct: 194 LPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEV 253

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+ EM  +G      T+N LI   +K   IE++ SY  +M    ++ +    +  +  
Sbjct: 254 ELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDA 313

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G  ++A  +      +G  PNE TY+ L+ G  K G + + + L  EM ++ + P 
Sbjct: 314 FCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 373

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT ++  LC+ GK+  AD    +M+   +     +Y +L+  H    N  +AL L  
Sbjct: 374 VVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLN 433

Query: 363 EMVSEGLKPSTS 374
           EM ++G++   S
Sbjct: 434 EMKNKGMELDVS 445


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 171/388 (44%), Gaps = 34/388 (8%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR------------------------ 54
           F + L   N+L   + K +R +L W++Y+ ML  I                         
Sbjct: 194 FIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKH 253

Query: 55  ----------YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
                      PN  T   +I+ LC+ G +   +++   +  K   P   +  +LI    
Sbjct: 254 VLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFC 313

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +++R  EG  +L  M    +  D +AY+ ++   VK  ++  A  V EEM  R    N+F
Sbjct: 314 RQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTF 373

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            Y   I   C+ G +E+A  L  EM   G+KP  +T+N LIEG  K + +E++     ++
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
               L  +      ++  LC CG+  +AN +    +  G  PN + Y+ ++ G  KEG  
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           +E +K+   M+ + +SP +  Y ++I   C+ GK+EE   Y   M +  L P V  Y + 
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  +   G    A     EM+  G+ P+
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPN 581



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 162/324 (50%), Gaps = 1/324 (0%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           ++ ML+    P+  T   LI  L K G+LQ  + +   +  K   P V   TSLI  + +
Sbjct: 605 FRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCK 664

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           E  ++    L   M +K +  + + Y+ ++    K+  +  A  +++ + ++G + NS  
Sbjct: 665 EGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVT 724

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y+T I  YC+   + EA  L   M+  G+ P    +  LI+GC KA   E++LS    M+
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV 784

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              +  S  AFN +I    + G   +A  ++   +D   +PN +TY+ LI  +   G I+
Sbjct: 785 EEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIK 843

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E  +L+ EM+ +++ P +  YTSL+    + G+  E    F  M +  + P    +  +V
Sbjct: 844 EAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMV 903

Query: 346 GIHLEKGNKAKALHLCEEMVSEGL 369
             HL++GN  KAL L ++M+SEG+
Sbjct: 904 DAHLKEGNWIKALKLVDDMLSEGV 927



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 169/349 (48%), Gaps = 4/349 (1%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N L H    +  N+L    +Q M+     PN     T++  L K G+ +  + +L  +  
Sbjct: 450 NGLCHCGDLTRANEL----FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKD 505

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           +  SP V    ++I+   +  ++EEG   L  M+ K +  +   Y   ++   +   +++
Sbjct: 506 QGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQA 565

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A   + EML  G + N  + T  I  YC+ G   +A    + M + G+ P  +T ++LI 
Sbjct: 566 AERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIH 625

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G +K  +++E++    +++ + L+P    +  +I  LC+ G+ K A  +      KG +P
Sbjct: 626 GLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINP 685

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N +TY+ LI G  K GEI +  +L+  +  K ++     Y+++I+  C+   L EA + F
Sbjct: 686 NIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLF 745

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
             MK   + P   +Y +L+    + GN  KAL L   MV EG+  + ++
Sbjct: 746 HGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAF 794



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 170/375 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+   +   G    + ++N LI    K    +  + +   + +     N      
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++ LC  G L    ++   +      P +++ T+++  +++E R EE + +L  M  + 
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   Y+ ++    K   +E       EM+ +G   N + Y  FI  YC  G+++ A 
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
               EM ++G+ P D     LI+G  K     ++ +    M+ + +LP     + +I  L
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A G+ +  LDKG  P+  TY+ LI    KEG+++   +L+ +M  K I+P +
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +LI+ LC+ G++ +A + F  +    L      Y +++  + +  N  +A  L   
Sbjct: 688 VTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHG 747

Query: 364 MVSEGLKPSTSYLCS 378
           M   G+ P +   C+
Sbjct: 748 MKLVGVPPDSFVYCA 762



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 161/355 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G     +++  LI+   K       +++ + M       N  T   LI  LCK G L+  
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKA 391

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+   +      P +     LI    + + +E+   LL  + ++N+  +      IV  
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNG 451

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                +L  A  +++EM+  G   N  +YTT +    + G+ EEA  ++  M++ GL P 
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N +I G  KA ++EE  SY  +M+++ L P+   +   I   C  G  + A     
Sbjct: 512 VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFI 571

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             LD G +PN++  + LI GY K+G   +    +  M  + + P +  ++ LI  L + G
Sbjct: 572 EMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNG 631

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           KL+EA   F  +    LVP V  Y SL+    ++G+   A  L ++M  +G+ P+
Sbjct: 632 KLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 2/376 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF   R +  +G    + + + LIH ++K+ +      ++  +L+    P+  T  +LIS
Sbjct: 601 AFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLIS 660

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G L+   ++ D +  K  +P ++   +LI  + +   I +   L   +  K +  
Sbjct: 661 NLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLAR 720

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +++ YS I+    K  NL  A  ++  M   G   +SFVY   I   C+ G  E+A  L 
Sbjct: 721 NSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLF 780

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G+      FN LI+G  K  ++ E+    E M+   + P+   +  +I   C  
Sbjct: 781 LGMVEEGIAS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTV 839

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN K+A  +      +   PN +TY+ L+ GY + G   E+  L+ EM  + I P   A+
Sbjct: 840 GNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAW 899

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + ++ +  + G   +A K    M S  +    ++Y  L+    +  N ++ L + +E+  
Sbjct: 900 SVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEK 959

Query: 367 EGLKPSTSYLCSASTC 382
           +G K S +  C    C
Sbjct: 960 QGSKLSLA-TCGTLVC 974



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 167/403 (41%), Gaps = 39/403 (9%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           V FD    +E++G   +L++++ +I  + ++   D    + + M      P+     TLI
Sbjct: 254 VLFD----MEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLI 309

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C+  +      MLD ++     P  +  T+LI   +++  I     + + M  + + 
Sbjct: 310 DGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIK 369

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEML------------------------------ 155
            +T  Y  +++   K+ +LE A  ++ EM                               
Sbjct: 370 LNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYEL 429

Query: 156 -----KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
                K   +AN+++    +   C  G +  AN L QEM + GLKP    +  +++G  K
Sbjct: 430 LIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVK 489

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
             R EE++     M  + L P    +N +I   C+ G  ++    L   + KG  PN  T
Sbjct: 490 EGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYT 549

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y   I GY + GE+Q   + + EM    I+P     T LI   C+ G   +A   F+ M 
Sbjct: 550 YGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCML 609

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              ++P V  +  L+    + G   +A+ +  E++ +GL P  
Sbjct: 610 DQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDV 652



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 162/367 (44%), Gaps = 13/367 (3%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            FE+  D+C+    +G + +++++N LI+ + K         ++  + E     N  T  T
Sbjct: 672  FELHDDMCK----KGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            +I+  CK   L     +   +      P   V  +LI    +    E+ + L   M+ + 
Sbjct: 728  IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
             I  T A++ ++    K+  L  A  + E+M+    + N   YT  I  +C  G I+EA 
Sbjct: 788  -IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAE 846

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             L  EM+   + P   T+  L+ G  +  R  E  S  ++M++R + P   A++ M+   
Sbjct: 847  QLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAH 906

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
             + GN  +A  ++   L +G +  +  Y+ LI    K   + EVLK+  E+E +    +L
Sbjct: 907  LKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSL 966

Query: 304  PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
                +L+    + G+ +EA +  + M        V  + +L+   +  GN+ K+      
Sbjct: 967  ATCGTLVCCFHRAGRTDEALRVLESM--------VRSFLNLLEFSVRNGNRGKSNGEMLS 1018

Query: 364  MVSEGLK 370
            ++ EG K
Sbjct: 1019 IILEGRK 1025



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 1/172 (0%)

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L +   K  R+E      + M+   ++P    +  +I   C  G  ++   +L    +
Sbjct: 202 NSLSKDLLKGNRVELFWKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEE 260

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN +TYS +I G  + G++ E L+L   M  K + P    Y +LI   C+  +  E
Sbjct: 261 KGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTE 320

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                  M +  L P    Y +L+   +++ +   A  + EEM +  +K +T
Sbjct: 321 GKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNT 372


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 181/386 (46%), Gaps = 37/386 (9%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATIRTLISALCKGGQLQ 75
           RG  ++  SF+ +I+ +    R        + ML  N+R PN+  + TL+S LCK G+  
Sbjct: 425 RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLR-PNDGLLTTLVSGLCKAGKQG 483

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V++  R+ GK   P ++ + +LI  + +   ++E + LL+ ML + ++ D I Y+ ++
Sbjct: 484 EAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLI 543

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   ++    + EEM+K+G   + + +   +   C   KI+EA+ L  E +  G  
Sbjct: 544 SGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYV 603

Query: 196 PYDETFNLLIEGCAKAKRIEES-----------------------LSYC----------- 221
           P   T+ ++I+G  KA ++EE                         +YC           
Sbjct: 604 PNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRL 663

Query: 222 -EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            + M SR +L SC+ ++ ++  LC  G    A  +L     +G  PN + Y+ +IGGY+K
Sbjct: 664 RDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSK 723

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G++ +V  +  EM   +I P    YT +I   C+ GK +EA K    M    ++P    
Sbjct: 724 LGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVT 783

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVS 366
           Y +      ++G   +A  +C+EM S
Sbjct: 784 YNAFTNGLCKEGKVEEAFKVCDEMSS 809



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 176/380 (46%), Gaps = 35/380 (9%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+T+I+   K  R D    ++  M +    PN  T   +I  LCK G+L       +++ 
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMV 318

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            ++ SP +I  +  I  +I+ E+I+E   +LK M     + + + Y+ ++    KM N+ 
Sbjct: 319 KEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNIS 378

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL----------- 194
            AL + ++ML +G S NS    + I  +C+  +I +A  +++EM   GL           
Sbjct: 379 EALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVI 438

Query: 195 ------------------------KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
                                   +P D     L+ G  KA +  E++    +++ +  +
Sbjct: 439 NWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFV 498

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P+    N +I  LC+ GN ++   +L   L++G   + ITY+ LI G  KEG+++E  +L
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFEL 558

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
             EM  K I P +  +  L+  LC   K++EA + +   K +  VP V  Y  ++  + +
Sbjct: 559 KEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK 618

Query: 351 KGNKAKALHLCEEMVSEGLK 370
                +  +L  E+VS+ L+
Sbjct: 619 ANKVEEGENLLNELVSKKLE 638



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 176/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A DV   L ++G   SL +   L+  + K++     + +Y  +      P+     T
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+A CKG +    + +  ++     +P V+   ++I  + +  R++E     ++M+++ 
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    I YS+ +   +K+  ++ A  V +EM + GF  N  VY T I  YC+ G I EA 
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M + G+ P   T N LI+G  K+ +I ++ +  E+M+ R L  +  +F+ +I  L
Sbjct: 382 KIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWL 441

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C       A   +   L +   PN+   + L+ G  K G+  E ++L+  +  K   P +
Sbjct: 442 CLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNI 501

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               +LI  LC+ G ++E  K  + M    LV     Y +L+    ++G   +   L EE
Sbjct: 502 VTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEE 561

Query: 364 MVSEGLKPS 372
           MV +G++P 
Sbjct: 562 MVKKGIQPD 570



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 166/356 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S + ++ N+LI    KSD+      + + M+      N+ +   +I+ LC   +  T
Sbjct: 390 KGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVT 449

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +  +  +  +   P   + T+L+  + +  +  E + L  R+L K  + + +  + +++
Sbjct: 450 ALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIH 509

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K  N++  L +  +ML+RG   +   Y T I   C+ GK++E   L +EM   G++P
Sbjct: 510 GLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQP 569

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TFNLL+ G   A +I+E+     +      +P+   +  MI   C+    ++   +L
Sbjct: 570 DIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLL 629

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              + K    N + Y+ LI  Y   G +    +L  +M+ + +  +   Y+SL+  LC  
Sbjct: 630 NELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNI 689

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           G +++A      M+   L+P V  Y +++G + + G   K   + +EM S  + P+
Sbjct: 690 GLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPN 745



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 170/376 (45%), Gaps = 18/376 (4%)

Query: 12  RYLEQRGFSLSLI--SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-------------- 55
           R  E R F ++ I   FN +   V      DL+  +Y    +++ +              
Sbjct: 157 RNFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKG 216

Query: 56  --PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
             P+  T   L+S+L K  +L+   ++ D I      P V + +++I    +  R ++ +
Sbjct: 217 LFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAI 276

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
            L  +M +  +  + + Y+ I++   K   L+ A    E+M+K   S +   Y+ FI   
Sbjct: 277 GLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGL 336

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
            +  KI+EANC+++EM   G  P +  +N LI+G  K   I E+L   + M+S+ + P+ 
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
              N +I+  C+     QA  +L   + +G   N+ ++S +I     +      L    E
Sbjct: 397 VTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIRE 456

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M  +++ P     T+L+S LC+ GK  EA + +  +     VP +    +L+    + GN
Sbjct: 457 MLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516

Query: 354 KAKALHLCEEMVSEGL 369
             + L L  +M+  GL
Sbjct: 517 MQETLKLLRDMLERGL 532



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 138/304 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +RG     I++NTLI    K  +    + + + M++    P+  T   L+  LC  
Sbjct: 525 RDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNA 584

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            ++     +          P V     +I    +  ++EEG  LL  ++ K +  +++ Y
Sbjct: 585 DKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVY 644

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++ A     N+ +A  + ++M  RG   +   Y++ +   C  G +++A  L+ EM  
Sbjct: 645 NSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRK 704

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL P    +  +I G +K  ++ +     ++M S  + P+   +  MI   C+ G  K+
Sbjct: 705 EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKE 764

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L    +KG  P+ +TY+    G  KEG+++E  K+  EM   ++      YT+LI 
Sbjct: 765 AAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLID 824

Query: 312 SLCQ 315
              Q
Sbjct: 825 GCHQ 828



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 125/271 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F++   + ++G    + +FN L+H +  +D+ D   R++    +N   PN  T   +I 
Sbjct: 555 GFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMID 614

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK  +++   ++L+ +  K+     +V  SLI        +     L   M  + ++ 
Sbjct: 615 GYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLL 674

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               YS +++    +  ++ A  + +EM K G   N   YTT IG Y + G++ + N ++
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVL 734

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM +  + P   T+ ++I+G  K  + +E+     +M  + +LP    +N     LC+ 
Sbjct: 735 QEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKE 794

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           G  ++A  +           +EITY+ LI G
Sbjct: 795 GKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 96/186 (51%)

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           GL P  +T   L+    KA  +++S    + +    ++P    F+ MI   C+      A
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            G+ +     G +PN +TY+++I G  K G + E  +   +M  + +SP+L  Y+  I+ 
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L +  K++EA+   K M     VP   +Y +L+  + + GN ++AL + ++M+S+G+ P+
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395

Query: 373 TSYLCS 378
           +  L S
Sbjct: 396 SVTLNS 401


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 156/317 (49%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T  TLI  LCK G L +  ++++ +  K C P VI  T LI R  +E R+EE   +
Sbjct: 12  PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M  K +  + + Y+ ++ A  K   ++ AL ++ +M  +G   + F + + I   C+
Sbjct: 72  LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K EEA  L Q+M   G+     T+N LI    +   ++E+L     M+ R        
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I+ LC  GN ++   +    + KG +PN I+ + LI G  + G IQ  L+   +M 
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
           ++ ++P +  Y SLI+ LC+ G+ +EA   F  ++   + P    Y +L+  H ++G   
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 311

Query: 356 KALHLCEEMVSEGLKPS 372
            A  L    V  G  P+
Sbjct: 312 DAHLLLSRGVDSGFIPN 328



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 151/299 (50%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LI   CK G+L+   ++LD + GK  +   +    LI  + ++E++++ + +
Sbjct: 47  PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 106

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M  K    D   ++ +++   K+   E AL +Y++ML  G  AN+  Y T I A+  
Sbjct: 107 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 166

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G ++EA  L+ +M   G    D T+N LI+   +A  IE+ L+  E MMS+ L P+  +
Sbjct: 167 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 226

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
            N +I  LC  GN + A   L   + +G +P+ +TY+ LI G  K G  QE L L+ +++
Sbjct: 227 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 286

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
            + I P    Y +LIS  C+ G  ++A            +P    +  LV   +++G++
Sbjct: 287 VEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 345



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 5/313 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   ++I++  LI    K  R +    +   M       N      LISALCK  +
Sbjct: 40  MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 99

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q  ++M   +  K C P +    SLI  + +  + EE + L + ML + +I +TI Y+ 
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++A ++   ++ AL +  +ML RG   +   Y   I A C  G IE+   L ++M + G
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P + + N+LI G  +   I+ +L +   M+ R L P    +N +I  LC+ G A++A 
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +G  P+ ITY+ LI  + KEG   +   L          P    +  L+S+ 
Sbjct: 280 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 339

Query: 314 CQCGKLEEADKYF 326
                ++E D+ F
Sbjct: 340 -----IKEGDQEF 347



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 2/225 (0%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++E ML  G   + F Y T I   C+ G +  A  LM EM+  G +P   T+ +LI+   
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  R+EE+ +  ++M  + L  +   +N +I  LC+    + A  M      KG  P+  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           T++ LI G  K  + +E L LY +M  + +      Y +LI +  + G ++EA K    M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 330 KSHSLVPGVDI-YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                 P  DI Y  L+      GN  K L L E+M+S+GL P+ 
Sbjct: 181 LFRG-CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 224



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 95/202 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  + + +   G   + I++NTLIH   +        ++   ML      ++ T   
Sbjct: 135 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 194

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI ALC+ G ++  + + + +  K  +P  I    LI  + +   I+  +  L+ M+ + 
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ ++    K    + AL +++++   G   ++  Y T I  +C+ G  ++A+
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 314

Query: 184 CLMQEMENAGLKPYDETFNLLI 205
            L+    ++G  P + T+ +L+
Sbjct: 315 LLLSRGVDSGFIPNEVTWYILV 336


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 179/361 (49%), Gaps = 5/361 (1%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           E   +   ++++  LI    KS   +   ++   M      PN  T  +L+  LCK G L
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              +D+  R+  K C P V+  T+LI  +    +++   +L+  M       DT++Y+ +
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN-AG 193
           +    ++  +E A  +++EM  +    +   YT  +  +C   ++EEA  L++ M+  AG
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+++++ G ++AKR  E+  + ++M++R + P+   ++ +I  LC+ G    A 
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   +DK   P+ +TY+ +I G       +E L L  EM  K + P++  + S+I +L
Sbjct: 421 EVLK-NVDK---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G ++EA K    M +H L PG+  Y +L+      G    A  L E M  +  K S+
Sbjct: 477 CRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSS 536

Query: 374 S 374
           +
Sbjct: 537 A 537



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 179/409 (43%), Gaps = 47/409 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +E R    +++++++L+H + K+   D    +++ M      PN  T  T
Sbjct: 205 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 264

Query: 64  LISALCKG-----------------------------------GQLQTYVDMLDRIHGKR 88
           LI  LC                                     G+++    +   +  K 
Sbjct: 265 LIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKS 324

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESA 147
           C P  I  T L+       R+EE   LL+ M     I  D + YS++V    + +    A
Sbjct: 325 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 384

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
               +EM+ R  + N+  Y++ I   C+ G++  A   M+ ++N   KP   T+ ++IEG
Sbjct: 385 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA---MEVLKNVD-KPDVVTYTIVIEG 440

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                R EE+L+  E+M+++++ PS   FN +I  LC  G+  +A  +L      G  P 
Sbjct: 441 LCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 500

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYK-----SISPTLP--AYTSLISSLCQCGKLE 320
            +TY+ L+ G+++ G ++   +L+  M  K     S +  +P  A+++LI  LC+  +++
Sbjct: 501 MVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREID 560

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +A    + ++S    P  +   ++V   L  G   +A  L   +   GL
Sbjct: 561 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 151/328 (46%), Gaps = 6/328 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           PNE T   +++ LCK        ++L  +  GK  +P ++  +++I    ++  ++    
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 115 LLKRML-RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           +L+ M+ R  M  D + Y+ +V    +   ++ A  +  EM  +G   + F ++  I  +
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK---LL 230
           C   K++EA  L +E+  +  +    + + LI G  + +RI E+    ++M  R+     
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P    +  +I   C+ GN ++A  ML +   +   PN +TYS L+ G  K G++ + L L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           +  M  K   P +  YT+LI  LC   K++ A      M +         Y +L+  +  
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 351 KGNKAKALHLCEEMVSEGLKPS-TSYLC 377
            G   +A  L +EM ++   P   +Y C
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTC 334



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E  F +       G    +++++ ++   +++ R        Q M+     PN  T 
Sbjct: 344 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 403

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI  LCK G++   +++L  +      P V+  T +I  +   +R EE + LL+ M+ 
Sbjct: 404 SSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVN 459

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +      ++ ++ A  ++ +++ A  +   M   G       YTT +  +   G++E 
Sbjct: 460 KRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEI 519

Query: 182 ANCLMQEMEN--------AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           A  L + M          A L P ++ F+ LI G  KA+ I+++++  E++ SR+  P+ 
Sbjct: 520 AYELFEVMRRKAKKSSSAANLVP-EQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAE 578

Query: 234 SAFNEMIRRLCECGNAKQANGML 256
                ++  L   G  ++A  ++
Sbjct: 579 EDCLAIVDGLLRAGRTEEAGKLI 601



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 2/110 (1%)

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           +PNE TY+ ++ G  K     +  ++  EM + KS++P L  Y+++I+  C+ G+++ A 
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 324 KYFKIMKSHS-LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + M +   + P V  Y S+V      G   +A  +  EM  +G++P 
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPD 115


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 174/365 (47%), Gaps = 6/365 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR---YPNEATIRTLISALCK 70
           + +RG    L+SF++LI V+    RN  +++   H  E  R    P+      LI   C+
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLA---RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G L   + M D +  + C   V+   + +  + +++   +  +L   M+ + M+ D   
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ ++    K  N++ AL ++E M++     +   Y T I  +C+ G++  A  L  +M 
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
              + P   ++  ++ G   +  + E+L+ C+QM+ + + P+    N +I+  C  G+  
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A   L+  +  G  P+  +Y+ LI GY KE  +++   L  EME + +   +  Y  ++
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +  C  GK++EA++  + M    + P    Y SL+  H+ + N  +A    +EM+  GL 
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744

Query: 371 PSTSY 375
           P   +
Sbjct: 745 PDDRF 749



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 174/368 (47%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF +      RG    L+++N +++ + K  + D    +   ML+    PN AT  
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL+  +C+   +    ++ D +  +   P ++  +SLI  + +   + + ++  + M R 
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D + Y++++    +   L  AL + +EML RG   +   Y TF+   C+     +A
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  EM   G+ P   TF  LI G  K   ++++L+  E M+   L P    +N +I  
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G   +A  +    + K   P+ I+Y  ++ G+   G + E L L  +M  K I P 
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           L    +LI   C+ G + +A +Y   M S+ ++P    Y +L+  +L++ N  KA  L  
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666

Query: 363 EMVSEGLK 370
           EM   GL+
Sbjct: 667 EMEKRGLQ 674



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 180/401 (44%), Gaps = 38/401 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + R   ++G S+S+ + N L+  + ++   DL W IY  ++      N  T+  +++
Sbjct: 209 AFQILR---RKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVN 265

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK  + +  +  L  + GK     ++   +LI    +E  +EE   LL     + M  
Sbjct: 266 ALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEP 325

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF----------------- 169
             + Y+ I+Y   K+   + A  V  EML+ G + N+  Y T                  
Sbjct: 326 GLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIF 385

Query: 170 ------------------IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
                             IG     G + +A    +EME +G+ P +  + +LI+G  + 
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             + ++L   ++M++R        +N  +  LC+      A+ +    +++G  P+  T+
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI GY K+G + + L L+  M   ++ P    Y +LI   C+ G++  A + +  M  
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++P    Y +++      G   +AL+LC++M+ +G++P+
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 167/372 (44%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R FE        +E +G    ++++NTLI+   +    +  +++          P   T 
Sbjct: 271 RKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTY 330

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             ++  LCK G+     D+L  +     +P      +L++ I + + I E   +   M R
Sbjct: 331 NAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR 390

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++ D +++S ++    +  +L  AL+ + EM + G   ++ +YT  I  +C  G + +
Sbjct: 391 RGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD 450

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  EM   G      T+N  + G  K K   ++     +M+ R ++P    F  +IR
Sbjct: 451 ALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIR 510

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ GN  +A  +    +     P+++TY+ LI G+ K GE+    +L+ +M  K I P
Sbjct: 511 GYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIP 570

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              +Y ++++  C  G L EA      M    + P +    +L+  +   G+  KA    
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL 630

Query: 362 EEMVSEGLKPST 373
            +M+S G+ P +
Sbjct: 631 SKMISNGIIPDS 642



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 127/270 (47%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   +Q +++ EG    + + RK +     A + ++   V+   ++ A  +Y E+++ G
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              N +     + A C+  K E     + +ME  G+     T+N LI    +   +EE+ 
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                  SR + P    +N ++  LC+ G   +A  +L   L  G +PN  TY+ L+   
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            +   I E  +++ EM  + + P L +++SLI  L + G L +A  +F+ M+   +VP  
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            IY  L+      G  + AL + +EM++ G
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARG 462



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/294 (19%), Positives = 124/294 (42%), Gaps = 17/294 (5%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDT-----------------IAYSLIVYAKV 139
           ++++  +++  R+ E    + RM+RK+ +                    + Y L+V   V
Sbjct: 139 SAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYV 198

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           + + L      ++ + ++G S +       +G     G ++ A  +  E+   G++    
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T N+++    K ++ E  + +   M  + +      +N +I   C  G  ++A  +L   
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             +G  P  +TY+ ++ G  K G+      +  EM    ++P    Y +L+  +C+   +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            EA + F  M    ++P +  + SL+G+    G+  +AL    EM   G+ P  
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 110/253 (43%), Gaps = 20/253 (7%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N  H + + S +V+  V+ R L  A      M+++   +   V  + I     +G +   
Sbjct: 130 NFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSV--- 186

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-SCSAFNEMIR 241
                     GL      ++LL+    +AK++ E  S   Q++ RK +  S +A N+++ 
Sbjct: 187 ----------GL-----IYDLLVRTYVQAKKLREG-SEAFQILRRKGVSVSINACNKLLG 230

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L   G    A  +    +  G   N  T + ++    K+ + + V+    +ME K +  
Sbjct: 231 GLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFA 290

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI++ C+ G +EEA +      S  + PG+  Y +++    + G   +A  + 
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350

Query: 362 EEMVSEGLKPSTS 374
            EM+  GL P+ +
Sbjct: 351 IEMLQLGLTPNAA 363


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 174/365 (47%), Gaps = 6/365 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR---YPNEATIRTLISALCK 70
           + +RG    L+SF++LI V+    RN  +++   H  E  R    P+      LI   C+
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLA---RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G L   + M D +  + C   V+   + +  + +++   +  +L   M+ + M+ D   
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ ++    K  N++ AL ++E M++     +   Y T I  +C+ G++  A  L  +M 
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
              + P   ++  ++ G   +  + E+L+ C+QM+ + + P+    N +I+  C  G+  
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A   L+  +  G  P+  +Y+ LI GY KE  +++   L  EME + +   +  Y  ++
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +  C  GK++EA++  + M    + P    Y SL+  H+ + N  +A    +EM+  GL 
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744

Query: 371 PSTSY 375
           P   +
Sbjct: 745 PDDRF 749



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 174/368 (47%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF +      RG    L+++N +++ + K  + D    +   ML+    PN AT  
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL+  +C+   +    ++ D +  +   P ++  +SLI  + +   + + ++  + M R 
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D + Y++++    +   L  AL + +EML RG   +   Y TF+   C+     +A
Sbjct: 427 GIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADA 486

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  EM   G+ P   TF  LI G  K   ++++L+  E M+   L P    +N +I  
Sbjct: 487 DMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G   +A  +    + K   P+ I+Y  ++ G+   G + E L L  +M  K I P 
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           L    +LI   C+ G + +A +Y   M S+ ++P    Y +L+  +L++ N  KA  L  
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666

Query: 363 EMVSEGLK 370
           EM   GL+
Sbjct: 667 EMEKRGLQ 674



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 180/401 (44%), Gaps = 38/401 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + R   ++G S+S+ + N L+  + ++   DL W IY  ++      N  T+  +++
Sbjct: 209 AFQILR---RKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVN 265

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK  + +  +  L  + GK     ++   +LI    +E  +EE   LL     + M  
Sbjct: 266 ALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEP 325

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF----------------- 169
             + Y+ I+Y   K+   + A  V  EML+ G + N+  Y T                  
Sbjct: 326 GLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIF 385

Query: 170 ------------------IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
                             IG     G + +A    +EME +G+ P +  + +LI+G  + 
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             + ++L   ++M++R        +N  +  LC+      A+ +    +++G  P+  T+
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI GY K+G + + L L+  M   ++ P    Y +LI   C+ G++  A + +  M  
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++P    Y +++      G   +AL+LC++M+ +G++P+
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 167/372 (44%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R FE        +E +G    ++++NTLI+   +    +  +++          P   T 
Sbjct: 271 RKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTY 330

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             ++  LCK G+     D+L  +     +P      +L++ I + + I E   +   M R
Sbjct: 331 NAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR 390

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++ D +++S ++    +  +L  AL+ + EM + G   ++ +YT  I  +C  G + +
Sbjct: 391 RGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD 450

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  EM   G      T+N  + G  K K   ++     +M+ R ++P    F  +IR
Sbjct: 451 ALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIR 510

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ GN  +A  +    +     P+++TY+ LI G+ K GE+    +L+ +M  K I P
Sbjct: 511 GYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIP 570

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              +Y ++++  C  G L EA      M    + P +    +L+  +   G+  KA    
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL 630

Query: 362 EEMVSEGLKPST 373
            +M+S G+ P +
Sbjct: 631 SKMISNGIIPDS 642



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 18/350 (5%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  S +S + ++H + +  R          M+          + +LIS     G +    
Sbjct: 131 FKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIY 190

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           D+L R +                  +Q +++ EG    + + RK +     A + ++   
Sbjct: 191 DLLVRTY------------------VQAKKLREGSEAFQILRRKGVSVSINACNKLLGGL 232

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           V+   ++ A  +Y E+++ G   N +     + A C+  K E     + +ME  G+    
Sbjct: 233 VRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADI 292

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N LI    +   +EE+        SR + P    +N ++  LC+ G   +A  +L  
Sbjct: 293 VTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIE 352

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L  G +PN  TY+ L+    +   I E  +++ EM  + + P L +++SLI  L + G 
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L +A  +F+ M+   +VP   IY  L+      G  + AL + +EM++ G
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/294 (19%), Positives = 124/294 (42%), Gaps = 17/294 (5%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDT-----------------IAYSLIVYAKV 139
           ++++  +++  R+ E    + RM+RK+ +                    + Y L+V   V
Sbjct: 139 SAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYV 198

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           + + L      ++ + ++G S +       +G     G ++ A  +  E+   G++    
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T N+++    K ++ E  + +   M  + +      +N +I   C  G  ++A  +L   
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             +G  P  +TY+ ++ G  K G+      +  EM    ++P    Y +L+  +C+   +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            EA + F  M    ++P +  + SL+G+    G+  +AL    EM   G+ P  
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 111/253 (43%), Gaps = 20/253 (7%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N  H +++ S +V+  V+ R L  A      M+++   +   V  + I     +G +   
Sbjct: 130 NFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSV--- 186

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-SCSAFNEMIR 241
                     GL      ++LL+    +AK++ E  S   Q++ RK +  S +A N+++ 
Sbjct: 187 ----------GL-----IYDLLVRTYVQAKKLREG-SEAFQILRRKGVSVSINACNKLLG 230

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L   G    A  +    +  G   N  T + ++    K+ + + V+    +ME K +  
Sbjct: 231 GLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFA 290

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI++ C+ G +EEA +      S  + PG+  Y +++    + G   +A  + 
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350

Query: 362 EEMVSEGLKPSTS 374
            EM+  GL P+ +
Sbjct: 351 IEMLQLGLTPNAA 363


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 173/368 (47%), Gaps = 9/368 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +R  S    S+  LI  + K+ + +    ++Q +L +   P+     +LI  LC    
Sbjct: 314 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 373

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                ++   ++ + C P  +    +I    +   +EE   L+K+M+    + D + Y+ 
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI---------GAYCEYGKIEEANC 184
           ++    K   +E AL+++ EM + G + N   + T I            C+ GK++EA  
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++ M + G  P   T++ LI G     R++++    E M+ R+  P+    N +I  LC
Sbjct: 494 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 553

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  K+A  +L   +  G SP+ +TY+ L+ G+ + G+ +   +L  +M  + ++P + 
Sbjct: 554 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 613

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT+L+S LC+  +L EA   F  MKS    P +  Y +L+      G     L L  EM
Sbjct: 614 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 673

Query: 365 VSEGLKPS 372
           V  G+ P 
Sbjct: 674 VCAGISPD 681



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 176/380 (46%), Gaps = 11/380 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A ++   + +RG   S +++N +I    K    +    + + M+E+   P+  T  T
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE---------EGMV 114
           ++  LCK  +++  + + + +    C+P    + ++IL + Q+ +I+         E   
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LLKRM     + D + YS ++     +  ++ A  + E+M+KR          T I   C
Sbjct: 494 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 553

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + G+I+EA  ++  M ++G  P   T+N L+ G  +A + E +      M++R L P+  
Sbjct: 554 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 613

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +  ++  LC+     +A G+       G +PN  TY+ LI G+   G++   LKL+ EM
Sbjct: 614 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 673

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS--HSLVPGVDIYESLVGIHLEKG 352
               ISP    Y +L + LC+ G+   A +  +  +    S   G ++Y   V   LE G
Sbjct: 674 VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAG 733

Query: 353 NKAKALHLCEEMVSEGLKPS 372
               AL    +MV  G  P+
Sbjct: 734 KMEMALGFVRDMVRGGQLPA 753



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 181/382 (47%), Gaps = 18/382 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + ++   L+  S ++++  +  S R D   ++Y+   EN R P   T+  L+ 
Sbjct: 164 ALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYR---ENRREPCLVTLNVLLE 220

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL-KRMLRKNMI 125
             C  GQ+    ++L  +  + C+P  +   +++  + +  R+EE + L   R L  +  
Sbjct: 221 GFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSS 280

Query: 126 HDTI-----AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             +       Y++++    +   ++ A+ ++E+M +R  S +S+ Y   I    + GK+ 
Sbjct: 281 SSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLN 340

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L Q++ ++G+ P    +  LI G   A   +++      M  R   PS   +N MI
Sbjct: 341 DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMI 400

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+ G  ++A  ++   ++ G  P+ +TY+ ++ G  K   ++E L L+ EME    +
Sbjct: 401 DASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCT 460

Query: 301 PTLPAYTSLISSLCQCGKLEEA------DKYFKIMK---SHSLVPGVDIYESLVGIHLEK 351
           P   ++ ++I  LCQ  K+++A      D+ F+++K       VP V  Y +L+      
Sbjct: 461 PNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 520

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
                A HL E+MV    KP+ 
Sbjct: 521 ARVDDARHLLEDMVKRQCKPTV 542



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/389 (21%), Positives = 169/389 (43%), Gaps = 48/389 (12%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N LI  ++K    + V ++ Q M++   +P+  T  T++  LCK G++     ++D + 
Sbjct: 47  YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR 106

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +   P    ++ L   +     +E    LL+ M     + ++ AY+++V A  K   ++
Sbjct: 107 SRMIPPYFATSSFLAHELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVD 162

Query: 146 SALVVYEEMLKR--GFSANSF------------------VY------------TTFIGAY 173
            AL +   M ++    +A S                   VY               +  +
Sbjct: 163 DALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGF 222

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           C  G++++A  L++ M +    P + ++  +++G  KA R+EE++        R+L  S 
Sbjct: 223 CSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRL---FGDRELPSSS 279

Query: 234 S---------AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           S          +N +I  LC+     +A  M     ++  SP+  +Y  LI G AK G++
Sbjct: 280 SSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKL 339

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +   L+ ++ +  ++P+  AYTSLI  LC     ++A + F  M      P    Y  +
Sbjct: 340 NDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVM 399

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +    ++G   +A  L ++M+ +G  P  
Sbjct: 400 IDASCKRGMLEEACDLIKKMIEDGHVPDV 428



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/335 (22%), Positives = 137/335 (40%), Gaps = 51/335 (15%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + + +   G    +++++TLI  +    R D    + + M++    P   T  TLI 
Sbjct: 491 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 550

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRKN 123
            LCK G+++   ++LD +     SP V+   +L+    R  Q ER  E   LL  M+ + 
Sbjct: 551 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE---LLSDMVARG 607

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ +V    K   L  A  V+ +M   G + N F YT  I  +C  G+++   
Sbjct: 608 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 667

Query: 184 CLMQEMENAGLKP-------------------------------------YDETFNLLIE 206
            L  EM  AG+ P                                      DE +   ++
Sbjct: 668 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 727

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  +A ++E +L +   M+    LP+      ++  LC+ G   +A  +L   +D     
Sbjct: 728 GLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD----- 782

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             + Y     G A +  ++E++   YE+E   + P
Sbjct: 783 --LAYGGKARGKAAK-FVEEMVGKGYEIEDAVLGP 814



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 89/210 (42%), Gaps = 5/210 (2%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M ++G      ++T+ I  +C  G+  EA  +   ME     PY + +N+LI+  +K + 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQE 59

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
            E      + M+ R   P    F  ++  LC+ G   +A  ++     +   P   T S 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           L       G ++   +L   M   + S    AY  ++ +LC+  ++++A +  + M    
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKR 175

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
           +       +S++   ++ G   +AL +  E
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 7/214 (3%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           VY   I +  +  + E    ++Q M + G  P   TF  ++ G  KA +++E+    ++M
Sbjct: 46  VYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM 105

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
            SR + P  +  + +   LC  G+ ++A  +L +        N   Y+ ++    K   +
Sbjct: 106 RSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARV 161

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            + L+L   M  K I     +  S++  L   G+++EA    ++ + +   P +     L
Sbjct: 162 DDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEA---LQVYRENRREPCLVTLNVL 218

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           +     +G   KA  L   M  E   P     C+
Sbjct: 219 LEGFCSRGQVDKARELLRAMPDEECAPDEVSYCT 252


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 179/353 (50%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDM 80
           S++ FN L+  + K  + DLV  + + M +N+R   +  +   LI+  C+  QL   + +
Sbjct: 79  SIVEFNKLLSAIAKMKKFDLVISLGERM-QNLRISYDLYSYNILINCFCRRSQLPLALAV 137

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++  +SL+      +RI + + L+ +M+      DT+ ++ +++    
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A+ + ++M++RG   +   Y   +   C+ G I+ A  L+++ME   ++     
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N +I+G  K K I+++ +   +M ++ + P    +N +I  LC  G    A+ +L+  +
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  +PN +T+S LI  + KEG++ E  KLY EM  +SI P +  Y+SLI+  C   +L+
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA   F++M S    P V  Y +L+    +     + + L  EM   GL  +T
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 173/358 (48%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG    L+++  +++ + K    DL   + + M +     +     T+I  LCK   + 
Sbjct: 213 QRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHID 272

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + +++  K   P V    SLI  +    R  +   LL  M+ + +  + + +S ++
Sbjct: 273 DAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALI 332

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A VK   L  A  +Y+EM+KR    + F Y++ I  +C + +++EA  + + M +    
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI+G  KAKR+EE +    +M  R L+ +   +N +I+ L + G+   A  +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  P+ ITYS L+ G  K G++++ L ++  ++   + P +  Y  +I  +C+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK+E+    F  +    + P V IY +++     KG K +A  L  EM  +G  P +
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 172/367 (46%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+   +++ ++L++    S R      +   M+E    P+  T  TLI
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLI 192

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L    +    V ++D++  + C P ++   +++  + +   I+  + LLK+M +  + 
Sbjct: 193 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIE 252

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ I+    K ++++ A  ++ +M  +G   + F Y + I   C YG+  +A+ L
Sbjct: 253 ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRL 312

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M    + P   TF+ LI+   K  ++ E+    ++M+ R + P    ++ +I   C 
Sbjct: 313 LSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  M  L + K   PN +TY+ LI G+ K   ++E ++L+ EM  + +      
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI  L Q G  + A K FK M S  + P +  Y  L+    + G   KAL + E + 
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492

Query: 366 SEGLKPS 372
              ++P 
Sbjct: 493 KSKMEPD 499



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 170/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ F++   +   ++    S  L S+N LI+   +  +  L   +   M++    P+  T
Sbjct: 93  MKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C   ++   V ++D++      P  +   +LI  +    +  E + L+ +M+
Sbjct: 153 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMV 212

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    D + Y  +V    K  +++ AL + ++M K    A+  +Y T I   C+Y  I+
Sbjct: 213 QRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHID 272

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  +ME  G++P   T+N LI       R  ++      M+ RK+ P+   F+ +I
Sbjct: 273 DAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALI 332

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TYS LI G+     + E   ++  M  K   
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI   C+  ++EE  + F+ M    LV     Y +L+    + G+   A  +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P 
Sbjct: 453 FKKMVSDGVPPD 464



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 154/329 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +E +G    + ++N+LI  +    R     R+  +M+E    PN  T   LI 
Sbjct: 274 AFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALID 333

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K G+L     + D +  +   P +   +SLI      +R++E   + + M+ K+   
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K + +E  + ++ EM +RG   N+  Y T I    + G  + A  + 
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G+ P   T+++L++G  K  ++E++L   E +   K+ P    +N MI  +C+ 
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  +    +      KG  PN I Y+ +I G+ ++G  +E   L+ EM+     P    Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 573

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            +LI +  + G    + +  K M+S   V
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFV 602



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 163/358 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G+    ++FNTLIH +   ++      +   M++    P+  T   +++ LCK G + 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +L ++   +    V++  ++I  + + + I++   L  +M  K +  D   Y+ ++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                      A  +   M++R  + N   ++  I A+ + GK+ EA  L  EM    + 
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++ LI G     R++E+    E M+S+   P+   +N +I+  C+    ++   +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G   N +TY+ LI G  + G+     K++ +M    + P +  Y+ L+  LC+
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE+A   F+ ++   + P +  Y  ++    + G       L   +  +G+KP+ 
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 142/301 (47%), Gaps = 2/301 (0%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   + +   +   R  P ++    L+  I + ++ +  + L +RM    + +D  +Y+
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL V  +M+K G+  +    ++ +  YC   +I +A  L+ +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G KP   TFN LI G     +  E+++  +QM+ R   P    +  ++  LC+ G+   A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             +L   ++KG    + + Y+ +I G  K   I +   L+ +ME K I P +  Y SLIS
Sbjct: 240 LSLLK-KMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+  +A +    M    + P V  + +L+   +++G   +A  L +EM+   + P
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 372 S 372
            
Sbjct: 359 D 359



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 113/260 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R     + ++++LI+     DR D    +++ M+    +PN  T  TLI   CK  +++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  +      +   +LI  + Q    +    + K+M+   +  D I YS+++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   LE ALVV+E + K     + + Y   I   C+ GK+E+   L   +   G+K
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  +I G  +    EE+ +   +M     LP    +N +IR     G+   +  +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAEL 592

Query: 256 LTLALDKGFSPNEITYSHLI 275
           +      GF  +  T S +I
Sbjct: 593 IKEMRSCGFVGDASTISMVI 612



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 35/239 (14%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   ++ R + QRG   + +++NTLI  + ++   D+  +I++ M+ +   P+  T   L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G+L                                   E+ +V+ + + +  M
Sbjct: 472 LDGLCKYGKL-----------------------------------EKALVVFEYLQKSKM 496

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y++++    K   +E    ++  +  +G   N  +YTT I  +C  G  EEA+ 
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           L +EM+  G  P    +N LI    +      S    ++M S   +   S  + +I  L
Sbjct: 557 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score = 37.7 bits (86), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 11/132 (8%)

Query: 253 NGMLTLALDKGFS-----------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           N +L L LD               P+ + ++ L+   AK  +   V+ L   M+   IS 
Sbjct: 54  NALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISY 113

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            L +Y  LI+  C+  +L  A      M      P +    SL+  +      + A+ L 
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 173

Query: 362 EEMVSEGLKPST 373
           ++MV  G KP T
Sbjct: 174 DQMVEMGYKPDT 185


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 194/372 (52%), Gaps = 4/372 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV + + ++G   + +++NT+I  + K+   D+   ++Q M++    P+  T  T+I 
Sbjct: 244 AEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIID 303

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK   +     +  ++  +   P  +   ++I  + + + I++   + ++M+ K +  
Sbjct: 304 GLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKP 363

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y++I+    K ++++ A  V+++M+ +G   N+  Y   I  Y   G+ EE    +
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    L+P   T+ LL++   K  +  E+ S  + M+ + + PS + +  M+    + 
Sbjct: 424 KEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKK 483

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   + + +L L +  G SPN   ++ +I  YAK   I EV+ ++ +M+ + +SP +  Y
Sbjct: 484 GALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTY 543

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GI-HLEKGNKAKALHLCEEM 364
            +LI +LC+ G++++A   F  M +  + P   ++ SLV G+  ++K  K + L L  EM
Sbjct: 544 GTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL--EM 601

Query: 365 VSEGLKPSTSYL 376
           +++G++P   + 
Sbjct: 602 LNQGIRPDIVFF 613



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 182/374 (48%), Gaps = 6/374 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR---YPNE 58
           R+ E    + R + + G  L ++S+NTL+  +    R +    +   M++       P+ 
Sbjct: 134 RVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDV 193

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            +   +I+     GQ+     +   +     SP V+   ++I  + + + ++    + ++
Sbjct: 194 VSYNIVINGFFNEGQVDKAYSLFLEMG---VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQ 250

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+ K +  + + Y+ I+    K + ++ A  V+++M+ +G   ++  Y T I   C+   
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++ A  + Q+M + G+KP   T+N +I+G  KA+ I+++    +QM+ + + P    +  
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  LC+  +  +A G+    +DKG  PN  TY+ LI GY   G+ +EV++   EM    
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           + P +  Y  L+  LC+ GK  EA   F  M    + P V IY  ++  + +KG  ++  
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 359 HLCEEMVSEGLKPS 372
            L   MV+ G+ P+
Sbjct: 491 DLLNLMVANGISPN 504



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 6/315 (1%)

Query: 63  TLISALC---KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           TL+  LC   +  + +  + M+       CSP V+    +I     E ++++   L   M
Sbjct: 160 TLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM 219

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               +  D + Y+ I+    K + ++ A  V+++M+++G   N+  Y T I   C+  ++
Sbjct: 220 ---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEV 276

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           + A  + Q+M + G+KP + T+N +I+G  KA+ ++ +    +QM+ R + P    +N +
Sbjct: 277 DMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI 336

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+     +A G+    +DKG  P+ +TY+ +I G  K   +     ++ +M  K +
Sbjct: 337 IDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV 396

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y  LI      G+ EE  +  K M +H L P V  Y  L+    + G   +A  
Sbjct: 397 KPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456

Query: 360 LCEEMVSEGLKPSTS 374
           L + M+ +G+KPS +
Sbjct: 457 LFDSMIRKGIKPSVT 471



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 155/358 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G     +++  +I  + K+   D    ++Q M++    PN  T   LI      GQ +
Sbjct: 358 DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWE 417

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V  +  +      P V     L+  + +  +  E   L   M+RK +      Y +++
Sbjct: 418 EVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +   K   L     +   M+  G S N  ++ T I AY +   I+E   +  +M+  GL 
Sbjct: 478 HGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLS 537

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  LI+   K  R+++++    QM++  + P+   FN ++  LC     ++   +
Sbjct: 538 PNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEEL 597

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L++G  P+ + ++ ++    KEG + E  +L   M    + P + +Y +LI   C 
Sbjct: 598 FLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCF 657

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +++EA K    M S  L P +  Y +L+  + + G    A  L  EM+ +G+ P  
Sbjct: 658 ASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 164/358 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   S+  +  ++H   K      +  +   M+ N   PN     T+I A  K   + 
Sbjct: 463 RKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMID 522

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +  ++  +  SP V+   +LI  + +  R+++ ++   +M+ + +  + + ++ +V
Sbjct: 523 EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           Y    +   E    ++ EML +G   +   + T +   C+ G++ EA  L+  M   GLK
Sbjct: 583 YGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLK 642

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N LI+G   A R++E++   + M+S  L P+  ++N ++   C+ G    A  +
Sbjct: 643 PDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCL 702

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L KG +P   TY+ ++ G  + G   E  +LY  M       ++  Y+ ++   C+
Sbjct: 703 FREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCK 762

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
               +EA K F+ + S  L   +  +  ++    + G K  A+ L   + + GL PS 
Sbjct: 763 NNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSV 820



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 161/342 (47%), Gaps = 2/342 (0%)

Query: 25  SFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++N LIH  ++     ++V RI +    ++  P+  T   L+  LCK G+      + D 
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLE-PDVFTYGLLLDYLCKNGKCNEARSLFDS 460

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K   P V +   ++    ++  + E   LL  M+   +  +   ++ ++ A  K   
Sbjct: 461 MIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAM 520

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++  + ++ +M ++G S N   Y T I A C+ G++++A     +M N G+ P +  FN 
Sbjct: 521 IDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+ G     + E+      +M+++ + P    FN ++  LC+ G   +A  ++   +  G
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ I+Y+ LI G+     + E +KL   M    + P + +Y +L+   C+ G+++ A 
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             F+ M    + PGV+ Y +++      G  ++A  L   M+
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 146/314 (46%), Gaps = 1/314 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + ++  L+  + K+ + +    ++  M+     P+      ++    K G L    D+L
Sbjct: 434 DVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +     SP   +  ++I    +   I+E M +  +M ++ +  + + Y  ++ A  K+
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKL 553

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A++ + +M+  G + N+ V+ + +   C   K E+   L  EM N G++P    F
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N ++    K  R+ E+    + M+   L P   ++N +I   C      +A  +L   + 
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  PN ++Y+ L+ GY K G I     L+ EM  K ++P +  Y ++++ L + G+  E
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733

Query: 322 ADK-YFKIMKSHSL 334
           A + Y  ++KS  L
Sbjct: 734 ARELYVNMIKSRKL 747



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/348 (20%), Positives = 143/348 (41%), Gaps = 35/348 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++Q+G S +++++ TLI  + K  R D     +  M+     PN     +L+  LC   +
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +   ++   +  +   P ++   +++  + +E R+ E   L+  M+   +  D I+Y+ 
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        ++ A+ + + M+  G   N   Y T +  YC+ G+I+ A CL +EM   G
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710

Query: 194 LKPYDETFN-----------------------------------LLIEGCAKAKRIEESL 218
           + P  ET+N                                   ++++G  K    +E+ 
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAF 770

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              + + S  L      FN MI  L + G  + A  +       G  P+ +TY  +    
Sbjct: 771 KIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
            +EG ++E+  L+  ME    +P      +LI  L   G++  A  Y 
Sbjct: 831 IEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYL 878



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/307 (20%), Positives = 129/307 (42%), Gaps = 37/307 (12%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL-VVYEEMLKRGFSANSFVY 166
           R+E G      +L+     D I  + ++      + +  A+ V+  +M + G       Y
Sbjct: 99  RLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSY 158

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENA---------------------------------- 192
            T +   C+  + EEA  L+  M +                                   
Sbjct: 159 NTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLE 218

Query: 193 -GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+N +I+G  KA+ ++ +    +QM+ + + P+   +N +I  LC+      
Sbjct: 219 MGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDM 278

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A G+    +DKG  P+ +TY+ +I G  K   +     ++ +M  + + P    Y ++I 
Sbjct: 279 AEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIID 338

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+   +++A+  F+ M    + P    Y  ++    +  +  +A  + ++M+ +G+KP
Sbjct: 339 GLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKP 398

Query: 372 ST-SYLC 377
           +  +Y C
Sbjct: 399 NNGTYNC 405



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/329 (20%), Positives = 139/329 (42%), Gaps = 35/329 (10%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G + + + FN+L++ +   D+ + V  ++  ML     P+     T++  LCK G++   
Sbjct: 570 GVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEA 629

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++D +      P VI   +LI       R++E + LL  M+   +  + ++Y+ +++ 
Sbjct: 630 RRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHG 689

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA--------------- 182
             K   +++A  ++ EML++G +     Y T +      G+  EA               
Sbjct: 690 YCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWS 749

Query: 183 --------------NC------LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
                         NC      + Q + +  L+    TFN++I+G  K  R E+++    
Sbjct: 750 ICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFA 809

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            + +  L+PS   +  +   L E G+ ++ + + ++    G +PN    + LI      G
Sbjct: 810 AIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRG 869

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           EI        +++ K+ S      + LIS
Sbjct: 870 EIPRAGAYLSKLDEKNFSLEASTTSMLIS 898



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 114/287 (39%), Gaps = 13/287 (4%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +IS+NTLI     + R D   ++   M+     PN  +  TL+   CK G++   
Sbjct: 640 GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNA 699

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +   +  K  +P V    +++  + +  R  E   L   M++   +     YS+I+  
Sbjct: 700 YCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDG 759

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K    + A  +++ +       +   +   I    + G+ E+A  L   +   GL P 
Sbjct: 760 FCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ L+ E   +   +EE       M      P+    N +IR+L + G   +A   L+
Sbjct: 820 VVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLS 879

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              +K FS    T S LI  +++E             EY+  + +LP
Sbjct: 880 KLDEKNFSLEASTTSMLISLFSRE-------------EYQQHAKSLP 913


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 176/356 (49%), Gaps = 1/356 (0%)

Query: 18  GF-SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           GF SL  I++NTL+     +   D   ++ + M ++   P   T  TL+  L K G+L  
Sbjct: 522 GFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDE 581

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            V +L  +  + C P V+  +SL+    + ++ EE + L   M+RK  + D   YSL++ 
Sbjct: 582 AVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVIN 641

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K  +++ AL V+  M + G       Y T + +  +  KI+ A  +  E++ + L P
Sbjct: 642 CLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVP 701

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +N+++ G  K+ R++E+    + M ++ +LP    +  ++  L + G  ++A  M 
Sbjct: 702 DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMF 761

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
           T   ++G  P+ + Y+ L+    K G++   L ++  M  K   P +  Y+SLI SL + 
Sbjct: 762 TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKE 821

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           G++EEA  +F+   S    P V +Y SL+    +KG   +AL L EEM      P+
Sbjct: 822 GRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 185/403 (45%), Gaps = 31/403 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE--------------- 51
           A+ +   L+++G    + ++NTLI V+ K  + D V  I + M+E               
Sbjct: 446 AWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGH 505

Query: 52  ---------NIRYPN-------EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIV 95
                     + YP+       E T  TL+SA    G +   V +L+ +    C P V+ 
Sbjct: 506 EGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT 565

Query: 96  NTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
            T+L+  + +  R++E + LL+ M ++      + YS ++ +  K    E +L +++EM+
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           ++G  A+   Y+  I   C+   +++A  +   M+  G++P    +  L+    K ++I+
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            +L    ++    L+P    +N M+  L +     +A  ++    ++   P+  TY+ L+
Sbjct: 686 FALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  K G ++E   ++ +M  +   P + AYTSL+  L + GKL  A   F+ M     V
Sbjct: 746 DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV 805

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           P V  Y SL+    ++G   +A +  E  +S+G  P+     S
Sbjct: 806 PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 167/366 (45%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A DV   +++ G    L ++ TL+  + K ++ D   +I+  + E+   P+      +++
Sbjct: 652  ALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVN 711

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             L K  ++     ++D +  +   P +   TSL+  + +  R+EE   +  +M  +    
Sbjct: 712  GLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP 771

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            D +AY+ ++    K   L  AL+++  M K+    +   Y++ I +  + G++EEA    
Sbjct: 772  DVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFF 831

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +   + G  P    ++ LI+   K   ++ +L   E+M  R+  P+   +N ++  L + 
Sbjct: 832  ENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKA 891

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            G    A  +L      G  P+ +TY+ LI G  K G + E    +  M+ K I P +  +
Sbjct: 892  GRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITF 951

Query: 307  TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            TSLI SL +  KL EA + F  M+     P V  Y  L+ I    G   +A  +  EM  
Sbjct: 952  TSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKV 1011

Query: 367  EGLKPS 372
            +G  P 
Sbjct: 1012 KGCMPD 1017



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/404 (22%), Positives = 183/404 (45%), Gaps = 41/404 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E++G   S++++++L+    K D+ +    ++  M+      + +T   +I+
Sbjct: 582 AVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVIN 641

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK   +   +D+  R+  +   P++    +L+  ++++E+I+  + +   +   +++ 
Sbjct: 642 CLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVP 701

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT  Y+++V   VK   ++ A  + + M  +    + F YT+ +    + G++EEA  + 
Sbjct: 702 DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMF 761

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   G +P    +  L++   K  ++  +L     M  ++ +P    ++ +I  L + 
Sbjct: 762 TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKE 821

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A      ++ KG +PN   YS LI  + K+G +   L+L+ EM+ +   P +  Y
Sbjct: 822 GRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881

Query: 307 TSLISSLCQCGKL-----------------------------------EEADKYFKIMKS 331
            +L+S L + G+L                                   +EA+ YFK MK 
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKE 941

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCE---EMVSEGLKPS 372
             +VP V  + SL+      G   K L  CE    M  EG  PS
Sbjct: 942 KGIVPDVITFTSLIE---SLGKVDKLLEACELFDSMEEEGYNPS 982



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 158/332 (47%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            + A  +   L++         +N +++ + KS+R D   ++   M      P+  T  +L
Sbjct: 685  DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL 744

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            +  L K G+L+   +M  ++  +   P V+  TSL+  + +  ++   +++ + M +K  
Sbjct: 745  LDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRC 804

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
            + D + YS ++ +  K   +E A   +E  + +G + N  VY++ I ++ + G ++ A  
Sbjct: 805  VPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALE 864

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            L +EM+     P   T+N L+ G AKA R+  +    E+M     +P    +N +I  + 
Sbjct: 865  LFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVG 924

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
            + G   +A        +KG  P+ IT++ LI    K  ++ E  +L+  ME +  +P++ 
Sbjct: 925  KMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVV 984

Query: 305  AYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
             Y  LI  L + GK+ EA   F  MK    +P
Sbjct: 985  TYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 156/347 (44%), Gaps = 10/347 (2%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F   +H   +S R D      Q M+++   P   T   LI AL K G +       + +
Sbjct: 289 TFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGM 348

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              RCSP V+  T+L+  + +  R+EE   +   M   N   D IAY+ ++    K    
Sbjct: 349 KNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEA 408

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  +++EM  RG   N   Y   I    + G+  EA  L  +++  G  P   T+N L
Sbjct: 409 DMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTL 468

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA--LDK 262
           I+   K  ++++ L+  ++M+ +     C     +I R    G+     G          
Sbjct: 469 IDVLGKGGQMDKVLAIIKEMVEKG--GEC-----IISRDSNAGHEGTIEGADRTVEYPSL 521

Query: 263 GF-SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           GF S  EITY+ L+  +   G + E +KL   M+     PT+  YT+L+  L + G+L+E
Sbjct: 522 GFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDE 581

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           A    + M+     P V  Y SL+    ++  + ++L L +EMV +G
Sbjct: 582 AVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG 628



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 177/370 (47%), Gaps = 8/370 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  + + ++ RG   +L ++N +I V+ K+ R    W+++  + E    P+  T  TL
Sbjct: 409 DMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTL 468

Query: 65  ISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           I  L KGGQ+   + ++  +   G  C      N      I   +R  E   L  + L +
Sbjct: 469 IDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGE 528

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                 I Y+ ++ A +   +++ A+ + E M K         YTT +    + G+++EA
Sbjct: 529 ------ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEA 582

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++EME  G +P   T++ L+    K  + EESLS  ++M+ +  +   S ++ +I  
Sbjct: 583 VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINC 642

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+  +  QA  +     ++G  P    Y  L+    K+ +I   L+++ E++  S+ P 
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPD 702

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y  +++ L +  +++EA K    MK+ +++P +  Y SL+    + G   +A ++  
Sbjct: 703 TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762

Query: 363 EMVSEGLKPS 372
           +M  EG +P 
Sbjct: 763 KMTEEGHEPD 772



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 146/313 (46%), Gaps = 24/313 (7%)

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           TY  M+ R+ G + +  V+     IL  + +E     M LL  +LR     + ++ +L +
Sbjct: 184 TYTLMIKRLAGAQETDAVV----QILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEI 239

Query: 136 YAKVK---------MRNL-----------ESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           + ++K         M N             SA++V+ ++ +     ++  +  F+ ++  
Sbjct: 240 FNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNR 299

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+++ A   +QEM  +G+ P   TF +LI+   K+  I+E+  +   M + +  P+   
Sbjct: 300 SGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVT 359

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  ++  L + G  ++A  +     +   SP+ I Y+ LI G  K GE      L+ EM+
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK 419

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + + P L  Y  +IS L + G+  EA + F  +K    VP V  Y +L+ +  + G   
Sbjct: 420 DRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMD 479

Query: 356 KALHLCEEMVSEG 368
           K L + +EMV +G
Sbjct: 480 KVLAIIKEMVEKG 492



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 142/316 (44%), Gaps = 3/316 (0%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           +Q G+S ++ ++  +I  +  +   D V +I   M +     +   + +L+        +
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              +++ +++    C+P   +   ++  +++       +++  ++ +  +  D   + + 
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           V++  +   L+ A    +EM+K G       +T  I A  + G I+EA      M+N   
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+  L+ G AKA R+EE+     +M      P   A+N +I  L + G A  A G
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +     D+G  PN  TY+ +I    K G   E  +L+++++ +   P +  Y +LI  L 
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG 473

Query: 315 QCGKLEEADKYFKIMK 330
           + G++   DK   I+K
Sbjct: 474 KGGQM---DKVLAIIK 486



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 35/298 (11%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
             E AF++   + + G    ++++ +L+ V+ K  +      I++ M +    P+  T  +
Sbjct: 754  LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            LI +L K G+++      +    K C+P V V +SLI     +   ++GMV         
Sbjct: 814  LIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLI-----DSFGKKGMV--------- 859

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                                 + AL ++EEM +R    N   Y   +    + G++  A 
Sbjct: 860  ---------------------DRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             L++EME  G  P   T+N+LI+G  K   ++E+ SY ++M  + ++P    F  +I  L
Sbjct: 899  KLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             +     +A  +     ++G++P+ +TY+ LI    + G++ E   +++EM+ K   P
Sbjct: 959  GKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 102/247 (41%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           H    Y+L++      +  ++ + +   M K G   +  + T+ +  +     +  A  +
Sbjct: 180 HTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEI 239

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             +M++ G  P    +N ++E   K      ++    ++   ++ P    F   +     
Sbjct: 240 FNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNR 299

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G    A   +   +  G  P   T++ LI    K G I E  K +  M+    SP +  
Sbjct: 300 SGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVT 359

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT+L++ L + G+LEEA + F  MK ++  P    Y +L+    + G    A  L +EM 
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK 419

Query: 366 SEGLKPS 372
             GL P+
Sbjct: 420 DRGLVPN 426



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 84/188 (44%)

Query: 17   RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
            +G + ++  +++LI    K    D    +++ M      PN  T   L+S L K G+L  
Sbjct: 837  KGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNV 896

Query: 77   YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
               +L+ +    C P ++    LI  + +   ++E     KRM  K ++ D I ++ ++ 
Sbjct: 897  AEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIE 956

Query: 137  AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
            +  K+  L  A  +++ M + G++ +   Y   I      GK+ EA  +  EM+  G  P
Sbjct: 957  SLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016

Query: 197  YDETFNLL 204
               T  ++
Sbjct: 1017 DGITIGIM 1024


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 176/358 (49%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           E + F  S++SFNT++    K    D+    +  ML++   P+  +   LI  LC  G +
Sbjct: 273 EGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSM 332

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              +D+ + +      P ++    L         I     ++++ML K    + + Y+++
Sbjct: 333 GEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVL 392

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    ++ N+E AL +Y+EM+  GF  +    T  +G+ C+  +++ A  L  EME  GL
Sbjct: 393 ICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGL 452

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   T++ LI G  K   +++++   E+M S +++P+      ++  LCE G   QA  
Sbjct: 453 RPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARM 512

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                +    S + I Y+ +I GY K G  +E +KLY ++  K ISPT+  + SL+   C
Sbjct: 513 YFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFC 572

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              KL +A +    +K H L P    Y +L+ ++ E+GN    L L  EM ++ + P+
Sbjct: 573 INRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 173/371 (46%), Gaps = 8/371 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +E  G    ++++N L          +  W I Q ML     PN  T   LI 
Sbjct: 335 ALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLIC 394

Query: 67  ALCKGGQ----LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             C+ G     L+ Y +M+   HG + S  +I +T L+  + +  +++    L   M   
Sbjct: 395 GHCQIGNVEEALKLYKEMIS--HGFQLS--IISSTVLLGSLCKSRQVDVAFKLFCEMEAN 450

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS +++   K   ++ A+++YE+M       NS ++   +   CE GKI +A
Sbjct: 451 GLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQA 510

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                 +  + L      +N++I+G  K     E++   +Q+  + + P+   FN ++  
Sbjct: 511 RMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C      QA  +L      G  PN +TY+ L+  Y +EG +Q +L+L  EM+ K+I PT
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YT +I  LC+  KL+E+ +  + M +  L P    Y +++    +  +  KA  L +
Sbjct: 631 HITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYD 690

Query: 363 EMVSEGLKPST 373
           +M+   L+P++
Sbjct: 691 KMLLHNLEPTS 701



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 188/368 (51%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + + +   GF LS+IS   L+  + KS + D+ ++++  M  N   P+  T  TL
Sbjct: 403 EEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTL 462

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK G++Q  + + +++   R  P  +++ ++++ + ++ +I +  +    ++  N+
Sbjct: 463 IHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNL 522

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I Y++++   +K  N   A+ +Y+++ ++G S     + + +  +C   K+ +A  
Sbjct: 523 SLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARR 582

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+  ++  GL+P   T+  L+    +   ++  L    +M ++ + P+   +  +I+ LC
Sbjct: 583 LLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLC 642

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +    +++  +L      G +P++++Y+ +I  + K  ++++  +LY +M   ++ PT  
Sbjct: 643 KQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSV 702

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  LI+  C  G L++AD     +++  +      Y +++  H  KG+  KA+    +M
Sbjct: 703 TYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQM 762

Query: 365 VSEGLKPS 372
           V +G + S
Sbjct: 763 VEKGFEVS 770



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 171/359 (47%), Gaps = 3/359 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++   F +S+ ++N+L++ +  S+   ++W +Y  +  +    +E T   ++  LC+  +
Sbjct: 205 MKDLNFIVSIQTYNSLLYNLRHSN---IMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSR 261

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            Q  V       GK   P V+   +++ R  +   ++        ML+  ++ D  +Y++
Sbjct: 262 FQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNI 321

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++      ++  AL +  +M   G   +   Y      +   G I  A  ++Q+M   G
Sbjct: 322 LIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKG 381

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+ +LI G  +   +EE+L   ++M+S     S  +   ++  LC+      A 
Sbjct: 382 PNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAF 441

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G  P+ ITYS LI G  K+GE+Q+ + LY +M    I P    + +++  L
Sbjct: 442 KLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGL 501

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ GK+ +A  YF  + + +L   + +Y  ++  ++++GN  +A+ L +++  +G+ P+
Sbjct: 502 CEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPT 560



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 143/293 (48%), Gaps = 10/293 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVV----TKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           A  + + L ++G S ++++FN+L++        S    L+  I  H LE    PN  T  
Sbjct: 545 AVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLE----PNAVTYT 600

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++  C+ G +Q+ +++L  +  K   P  I  T +I  + ++ +++E   LL+ M   
Sbjct: 601 TLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAV 660

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D ++Y+ I+ A  K R++  A  +Y++ML       S  Y   I  +C YG +++A
Sbjct: 661 GLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDA 720

Query: 183 NCLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           + L+  ++N  +      +  +I+  CAK   +++++ Y  QM+ +    S   ++ +I 
Sbjct: 721 DNLLVSLQNRKVNLNKYAYTTIIKAHCAKGD-VDKAVVYFRQMVEKGFEVSIRDYSAVIG 779

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           RLC+     +A     + L  G  P++  +  L+  + + G +    +L  EM
Sbjct: 780 RLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 120/242 (49%)

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S++V    +    + A++ +++   + F  +   + T +  YC+ G ++ A      M  
Sbjct: 250 SIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLK 309

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL P   ++N+LI G   A  + E+L     M +  L P    +N + +     G    
Sbjct: 310 HGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLING 369

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ++   L KG +PN +TY+ LI G+ + G ++E LKLY EM       ++ + T L+ 
Sbjct: 370 AWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLG 429

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           SLC+  +++ A K F  M+++ L P +  Y +L+    ++G   +A+ L E+M S  + P
Sbjct: 430 SLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIP 489

Query: 372 ST 373
           ++
Sbjct: 490 NS 491



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/356 (21%), Positives = 147/356 (41%), Gaps = 35/356 (9%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           YL     SL +I +N +I    K        ++Y+ + E    P   T  +L+   C   
Sbjct: 516 YLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINR 575

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L     +LD I      P  +  T+L+    +E  ++  + LL  M  K +    I Y+
Sbjct: 576 KLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYT 635

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    K   L+ +  + E+M   G + +   Y T I A+C+   + +A  L  +M   
Sbjct: 636 VVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLH 695

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            L+P   T+N+LI G                                    C  G+ K A
Sbjct: 696 NLEPTSVTYNILING-----------------------------------FCVYGDLKDA 720

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           + +L    ++  + N+  Y+ +I  +  +G++ + +  + +M  K    ++  Y+++I  
Sbjct: 721 DNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGR 780

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LC+   + EA  +F +M S  + P  D++E L+    + G+      L  EM+  G
Sbjct: 781 LCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 185/386 (47%), Gaps = 12/386 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  R L++   +  +  FN LIH + K    D   +++++M  +   P   T  T+IS
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140

Query: 67  ALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            LCK G L+   ++L+ +   G + +P ++   +LI    +  RI E     ++M    +
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D +  +++V    K  ++E AL + + M   G   +   Y + I A C  GK+ EA  
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ M      P   TFN L++G  KA  +  +L   E+M    +LP    +  ++  LC
Sbjct: 261 ILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 317

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A  +L   + +G+ P+ I Y+ L+ G  K GEI+E  KL  EM  +     + 
Sbjct: 318 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVV 377

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+SL+S  C+ G + +A +    M S ++VP +  Y  ++G  ++ G+ +KA+ L  ++
Sbjct: 378 MYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDL 437

Query: 365 VSEGLKPST-------SYLCSASTCR 383
           V+ G  P           LC A+  R
Sbjct: 438 VARGYVPDVVTYNTLIDGLCKANRVR 463



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 180/391 (46%), Gaps = 34/391 (8%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           EQ G+   + S+N L+ ++ KS  +    ++Y+ +L +   PN  T + LI   CK GQ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              ++ L  +     +P V +   LI  + ++   ++ + L + M    +  + + Y+ +
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 135 VYAKVKMRNLESALVVYEEMLKRGF-SANSFV-YTTFIGAYCEYGKIEEANCLMQEMENA 192
           +    K  NLE A  + EEM+++G  SA   V Y T I A+    +I EA    ++M+ A
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G+ P   T N+L+ G  K   +EE+L   + M     +P    +N +I  LC  G   +A
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258

Query: 253 -------------------------NGMLTLALD-------KGFSPNEITYSHLIGGYAK 280
                                     GML  AL+       +   P+ ITY+ L+ G  +
Sbjct: 259 AEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G++Q    L  E+  +   P + AYTSL+  LC+ G++EEA K  K M       GV +
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           Y SLV  +   GN  KA  +  EMVS  + P
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVP 409



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 178/370 (48%), Gaps = 3/370 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   ++  G    +I++N++IH +  + +      I + M  +   P+  T  TL
Sbjct: 221 EEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTL 277

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +   CK G L   +++L+ +  +   P VI  T L+  + +  +++    LL+ ++R+  
Sbjct: 278 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 337

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I D IAY+ +V    K   +E A  + +EM  RG      +Y++ +  YC  G + +A  
Sbjct: 338 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKARE 397

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++ EM +  + P   T+N+++ G  K   I +++S    +++R  +P    +N +I  LC
Sbjct: 398 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 457

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +    ++A  +      +G  PN++T   ++ G  + G + +   L  EM  K  +P + 
Sbjct: 458 KANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVV 517

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YTSLI  LC+  ++++A      M+   +      Y  L+      G  A+A+ + +EM
Sbjct: 518 VYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEM 577

Query: 365 VSEGLKPSTS 374
           V+ G  P  S
Sbjct: 578 VARGFLPDGS 587



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 39  NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           +DLV R Y         P+  T  TLI  LCK  +++   D+ D +  + C P  +   S
Sbjct: 435 SDLVARGY--------VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS 486

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           ++  + +  R+++   L+  M RK    + + Y+ ++    K   ++ A +V + M  +G
Sbjct: 487 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
            + + F Y   I +    G++ EA  +  EM   G  P   T   L E 
Sbjct: 547 VALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 169/350 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++NTLI  +    R      + + M      P+  T   L+ A CK    +  + +LD +
Sbjct: 168 TYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM 227

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
           H K C+P ++    ++  I QE R+E+ M  LK +       +T++Y++++         
Sbjct: 228 HDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERW 287

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  + EEM  +G   N   +   I   C  G +E A  ++++M   G  P   ++N L
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +    K K+I +++ + E M+SR   P   ++N ++  LC  G    A  +L    DKG 
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           SP  I+Y+ +I G  K G+ +E L+L  EM  K + P +  Y+++ S LC+  ++EEA +
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            F  ++   + P   +Y +++    ++     A+ L   M+S G  P+ S
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNES 517



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 155/317 (48%), Gaps = 3/317 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+      +++  C  GQL     ++  +      P      +LI  +    R    + +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ M R+  + D + Y++++ A  K    + A+ + +EM  +G + +   Y   +   C+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++E+A   ++ + + G +P   ++N++++G   A+R E++    E+M  +   P+   
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN +I  LC  G  + A  +L      G +PN ++Y+ L+  + K+ +I + ++    M 
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            +   P + +Y +L+++LC+ G+++ A +    +K     P +  Y +++    + G   
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 356 KALHLCEEMVSEGLKPS 372
           +AL L +EM S+GL+P 
Sbjct: 429 EALELLDEMTSKGLQPD 445



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 145/290 (50%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A +  + L   G   + +S+N ++  +  ++R +   ++ + M      PN  T   L
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNML 312

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LC+ G ++  +++L+++    C+P  +    L+    ++++I + M  ++ M+ +  
Sbjct: 313 ISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGC 372

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D ++Y+ ++ A  +   ++ A+ +  ++  +G S     Y T I    + GK +EA  
Sbjct: 373 YPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALE 432

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM + GL+P   T++ +  G  +  RIEE++    ++    + P+ + +N ++  LC
Sbjct: 433 LLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLC 492

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           +      A  +    +  G  PNE TY+ L+ G A EG ++E  +L+ ++
Sbjct: 493 KRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/332 (20%), Positives = 152/332 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ A  +   +  +G +  ++++N +++ + +  R +      +++      PN  +   
Sbjct: 217 YKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNI 276

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++  L    + +    +++ +  K C P V+    LI  + +   +E  M +L++M +  
Sbjct: 277 VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG 336

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              ++++Y+ +++A  K + +  A+   E M+ RG   +   Y T + A C  G+++ A 
Sbjct: 337 CTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 396

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ ++++ G  P   ++N +I+G  KA + +E+L   ++M S+ L P    ++ +   L
Sbjct: 397 ELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGL 456

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     ++A        D G  P    Y+ ++ G  K  E    + L+  M      P  
Sbjct: 457 CREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNE 516

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
             YT L+  L   G ++EA + F  + S  +V
Sbjct: 517 STYTILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 111/228 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A +V   + Q G + + +S+N L+H   K  +        + M+    YP+  +  
Sbjct: 321 LVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYN 380

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALC+ G++   +++L ++  K CSP++I   ++I  + +  + +E + LL  M  K
Sbjct: 381 TLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK 440

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS I     +   +E A+  + ++   G    + +Y   +   C+  +   A
Sbjct: 441 GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNA 500

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             L   M ++G  P + T+ +L+EG A    ++E+     Q+ SR ++
Sbjct: 501 IDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 180/369 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+   + + +E  G   ++ +F   I V+ ++ + D  + I++ M +    P+  T   L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I ALC  GQL+   ++  ++      P  ++  +L+ +      ++       +M     
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + ++++V    K R+ + A   ++ M K+G   N   Y T I      G+IE+A  
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+  ME+ G++P   T+N+ I+   K+    +++   E+M ++ ++P+  A N  +  L 
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E G  ++A  M     + G +P+ +TY+ ++  Y+K G++ E + L  EM      P + 
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
              SLI SL + G+++EA + F  MK   L P V  Y +L+    ++G   KA+ L E M
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 365 VSEGLKPST 373
           + +   P+T
Sbjct: 604 IEKKCSPNT 612



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 168/364 (46%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V   + + GF L+  S+N LIH++ +S        +Y+ M+     P+  T   L+ AL 
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALG 238

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K    +  + +L  +      P V   T  I  + +  +I+E   + +RM  +    D +
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y++++ A      LE+A  ++ +M   G   +  +Y T +  + ++G ++       +M
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E  G  P   TF +L++   KA+  +E+ +  + M  + +LP+   +N +I  L   G  
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           + A  +L      G  P   TY+  I  + K GE  + ++ + +M+ K I P + A  + 
Sbjct: 419 EDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + SL + G+L EA   F  ++ + L P    Y  ++  + + G   +A++L  EM+  G 
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538

Query: 370 KPST 373
           +P  
Sbjct: 539 EPDV 542



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 154/345 (44%), Gaps = 1/345 (0%)

Query: 29   LIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
            L+ V+ K  R    ++I+    + +   P  A+   LI  L +    +   D+   +   
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 88   RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
             C+P       L+    +  +I E   L K M+ +    D I Y++++ +  K  NL+ A
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 148  LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
            L  + +++   F      Y   I    + G++EEA  L +EM + G KP    FN+LI G
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937

Query: 208  CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
              K    E +    ++M++  + P   ++  ++  LC  G   +A          G  P+
Sbjct: 938  YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997

Query: 268  EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
             I Y+ +I G  K   ++E L LY EM  + I P L  Y SL+ +L   G +E+A + ++
Sbjct: 998  FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057

Query: 328  IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++   L P V  Y +L+  +    N   A  + + M+ +G  P+
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 174/398 (43%), Gaps = 35/398 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G+   +++F  L+ V+ K+   D  +  +  M +    PN  T  TLI  L + G+
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +L  +      P        I    +     + +   ++M  K ++ + +A + 
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +Y+  +M  L  A  ++  + + G + +S  Y   +  Y + G+++EA  L+ EM   G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P     N LI+   KA R++E+    ++M   KL P+   +N ++  L + G  ++A 
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    ++K  SPN I+++ L+  + K  E++  LK++ +M      P +  Y ++I  L
Sbjct: 598 ELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657

Query: 314 CQCGKLEEADKYFKIMKSH---------SLVPGV-------------------------- 338
            +  K+  A  +F  +K           +L+PG+                          
Sbjct: 658 IKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
             +E L+G  L +    KA+   EE+V  G+    S+L
Sbjct: 718 SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFL 755



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 140/305 (45%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E A+D+ + ++  G +    +FN L+ V  KS +   ++ +Y+ M+     P+  T   +
Sbjct: 805  EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            IS+L K   L   +D    +      P       LI  + +  R+EE M L + M     
Sbjct: 865  ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +   +++++    K+ + E+A  +++ M+  G   +   YT  +   C  G+++EA  
Sbjct: 925  KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               E+++ GL P    +N +I G  K++R+EE+L+   +M +R ++P    +N ++  L 
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              G  +QA  M       G  P+  TY+ LI GY+     +    +Y  M     +P + 
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104

Query: 305  AYTSL 309
             Y  L
Sbjct: 1105 TYAQL 1109



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/407 (19%), Positives = 165/407 (40%), Gaps = 36/407 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++ R ++  G    L+++  LI  +  + + +    ++  M  N   P++    TL+ 
Sbjct: 281 AYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLD 340

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L T+ +   ++      P V+  T L+  + +    +E       M ++ ++ 
Sbjct: 341 KFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILP 400

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------------- 173
           +   Y+ ++   ++   +E AL +   M   G    ++ Y  FI  +             
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETF 460

Query: 174 ----------------------CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
                                  E G++ EA  +   +   GL P   T+N++++  +K 
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            +++E+++   +M+     P     N +I  L + G   +A  M     D   SP  +TY
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + L+ G  KEG +Q+ ++L+  M  K  SP   ++ +L+   C+  ++E A K F  M  
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTV 640

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
               P V  Y +++   L K NK          + + + P    +C+
Sbjct: 641 MDCKPDVLTYNTVI-YGLIKENKVNHAFWFFHQLKKSMHPDHVTICT 686



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/399 (21%), Positives = 169/399 (42%), Gaps = 44/399 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   ++++ N  ++ + +  R      ++  + EN   P+  T   ++    K GQ
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   V++L  +    C P VIV  SLI  + +  R++E   +  RM    +    + Y+ 
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   ++ A+ ++E M+++  S N+  + T +  +C+  ++E A  +  +M    
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            KP   T+N +I G  K  ++  +  +  Q + + + P       ++  L +CG   Q  
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCG---QIG 698

Query: 254 GMLTLALD----KGFSPNEITYSHLIGGYAKEGEIQEVL--------------------- 288
             +++A D      F  N   +  L+GG   E E+ + +                     
Sbjct: 699 DAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPL 758

Query: 289 ---------KLY-YEMEYK-----SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
                    +LY Y++  K      ISPTL +Y  LI  L +    E+A   FK MK+  
Sbjct: 759 VRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVG 818

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             P    +  L+ +H + G   +   L +EM+S   KP 
Sbjct: 819 CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPD 857



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 129/321 (40%), Gaps = 39/321 (12%)

Query: 91  PMVIVNT---SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN-LES 146
           P V+  T   + +L  ++     E M  +   ++K +I   +   L ++  + +R  L  
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
              V  +M K GF  N++ Y   I    + G   EA  + + M + GLKP  +T++ L+ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              K +  E  +   ++M    L P+   F   IR L   G   +A  +     D+G  P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYY---------------------------------- 292
           + +TY+ LI      G+++   +L+                                   
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 293 -EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +ME     P +  +T L+  LC+    +EA   F +M+   ++P +  Y +L+   L  
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
           G    AL L   M S G++P+
Sbjct: 416 GRIEDALKLLGTMESVGVQPT 436


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 185/403 (45%), Gaps = 35/403 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR--------NDLVWRIYQ--------- 47
           ++ F V   + + G  L++++FNTLI+ + K  +        +D+V R YQ         
Sbjct: 174 DLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTI 233

Query: 48  ------------------HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRC 89
                              M E    P+  T  T+I +LCK  ++   +D+   +  K  
Sbjct: 234 INGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGI 293

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           SP +    SLI  +    R  E   +L  M+  N++ + + +SL++    K  N+  A  
Sbjct: 294 SPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARG 353

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V + M + G   N   Y++ +  Y    ++ EA  L   M   G KP   ++N+LI G  
Sbjct: 354 VLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYC 413

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           KAKRI E+     +M+ + L P   ++N +I  LC+ G  ++A+ +    L  G  P+  
Sbjct: 414 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLC 473

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TYS L+ G+ K+G + +  +L+  M+   + P +  Y  LI ++C+   L+EA K F  +
Sbjct: 474 TYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 533

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               L P V IY +++    ++G   +AL     M  +G  P+
Sbjct: 534 FVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPN 576



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 36/386 (9%)

Query: 23  LISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +I FN L+  + K    +D V  + + M      P+  T+  LI+   +  ++     +L
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVL 180

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I        ++   +LI  + +  +  + + L   M+ +    D   Y+ I+    K+
Sbjct: 181 AKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKI 240

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
               +A  ++ +M + G   +   Y+T I + C+  ++ EA  +   M+  G+ P   T+
Sbjct: 241 GETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTY 300

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G     R  E+ +   +MMS  ++P+   F+ +I   C+ GN  +A G+L    +
Sbjct: 301 NSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTE 360

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLK-------------------------------- 289
            G  PN +TYS L+ GY+ + E+ E  K                                
Sbjct: 361 MGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGE 420

Query: 290 ---LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L+ EM ++ ++P + +Y +LI  LCQ G+L EA   FK M ++  +P +  Y  L+ 
Sbjct: 421 AKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLD 480

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              ++G  AKA  L   M S  LKP+
Sbjct: 481 GFCKQGYLAKAFRLFRAMQSTYLKPN 506



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/297 (18%), Positives = 126/297 (42%), Gaps = 36/297 (12%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +FE A  V + + + G   +++++++L++  +         +++  M+     P+  +  
Sbjct: 348 VFE-ARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYN 406

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+  CK                                    +RI E   L   M+ +
Sbjct: 407 ILINGYCKA-----------------------------------KRIGEAKQLFNEMIHQ 431

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D ++Y+ ++    ++  L  A  +++ ML  G   +   Y+  +  +C+ G + +A
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L + M++  LKP    +N+LI+   K++ ++E+     ++  + L P+   +  +I  
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           LC+ G   +A        + G  PNE +Y+ +I G+ +  +    ++L  EM  K  
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGF 608



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/197 (20%), Positives = 83/197 (42%), Gaps = 36/197 (18%)

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD-KGFSPNE-- 268
           + I+++L+Y   M+ RK  P    FN+++  + +  +   A   L+  ++  G SP+   
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159

Query: 269 ---------------------------------ITYSHLIGGYAKEGEIQEVLKLYYEME 295
                                            +T++ LI G  K G+  + ++L+ +M 
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            +   P +  YT++I+ LC+ G+   A   F+ M      P V  Y +++    +     
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279

Query: 356 KALHLCEEMVSEGLKPS 372
           +AL +   M ++G+ P+
Sbjct: 280 EALDIFSYMKAKGISPN 296



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 31/156 (19%), Positives = 70/156 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + +   G    L +++ L+    K       +R+++ M      PN      LI 
Sbjct: 456 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 515

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A+CK   L+    +   +  +   P V + T++I  + +E  ++E +   + M       
Sbjct: 516 AMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 575

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           +  +Y++I+   ++ ++   A+ +  EM ++GF A+
Sbjct: 576 NEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 177/358 (49%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG   ++IS+NT+I+ + K+    +   +++ M +N   P+  T  T+I +LCK   + 
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             ++ L  +  +   P V     ++       ++ E   L K M+ ++++ DT+  +++V
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +  A +V+E M ++G   N   Y   +  YC    + EA  + + M   G  
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N+LI G  K++R++E+ S   +M  + L P    ++ +++ LC+ G  K+A  +
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G  PN +TYS L+ G+ K G + E LKL   M+ K + P +  +T LI  +  
Sbjct: 426 FKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFI 485

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE A + F  + +  + P +  Y  ++   L++G   +A  L  +M  +G  P++
Sbjct: 486 AGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNS 543



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 177/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +     +C  ++  G + ++ S N LI+ + + +  D    I   M +   +P  +T   
Sbjct: 104 YSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNA 163

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G+++  V++ + +  +   P VI   ++I  + +       + + K+M +  
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y+ I+ +  K R +  A+    EML RG   N F Y   +  +C  G++ EA 
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEAT 283

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L +EM    + P   T  +L++G  K   + E+    E M  + + P+ S +N ++   
Sbjct: 284 RLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  +  + + +G +P   +Y+ LI G+ K   + E   L  EM +K+++P  
Sbjct: 344 CLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDT 403

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y++L+  LCQ G+ +EA   FK M S+ L+P +  Y  L+    + G+  +AL L + 
Sbjct: 404 VTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKS 463

Query: 364 MVSEGLKPS 372
           M  + L+P+
Sbjct: 464 MQEKKLEPN 472



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 151/336 (44%), Gaps = 3/336 (0%)

Query: 39  NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           +D +   Y+ +  N R P+ A     + +  K  Q  T V + +++     +  V     
Sbjct: 70  DDALASFYRMVRMNPR-PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIA-YSLIVYAKVKMRNLESALVVYEEMLKR 157
           LI  + +   ++  + +L +M +   IH T + ++ ++        ++ A+ ++ EM++R
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLG-IHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   N   Y T I   C+ G    A  + ++ME  G KP   T+N +I+   K + + ++
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           + +  +M+ R + P+   +N M+   C  G   +A  +    + +   P+ +T + L+ G
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             KEG + E   ++  M  K + P +  Y +L+   C    + EA K F+IM      PG
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           V  Y  L+    +     +A  L  EM  + L P T
Sbjct: 368 VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDT 403



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 147/345 (42%), Gaps = 35/345 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A +    +  RG   ++ ++N ++H      + +   R+++ M+     P+  T+
Sbjct: 242 RLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301

Query: 62  RTLISALCKGG-------------------QLQTYVDMLDRIHGKR-------------- 88
             L+  LCK G                    + TY  ++D    +R              
Sbjct: 302 TILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR 361

Query: 89  --CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
             C+P V     LI    +  R++E   LL  M  K +  DT+ YS ++    +    + 
Sbjct: 362 QGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE 421

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +++EM   G   N   Y+  +  +C++G ++EA  L++ M+   L+P      +LIE
Sbjct: 422 ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G   A ++E +     ++ +  + P+   +  MI+ L + G + +A  +     D GF P
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           N  +Y+ +I G+ +  +    ++L  EM  K  S  L  +  L+ 
Sbjct: 542 NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 120/266 (45%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I++ +    RM+R N       +   + +  K +   + + +  +M   G + N +    
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C    ++ A  ++ +M   G+ P   TFN LI G     +I+E++    +M+ R 
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+  ++N +I  LC+ GN   A  +       G  P+ +TY+ +I    K+  + + +
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +   EM  + I P +  Y  ++   C  G+L EA + FK M    ++P       LV   
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTS 374
            ++G  ++A  + E M  +G++P+ S
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNIS 334



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 106/234 (45%)

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           +++ AL  +  M++     +   +  F+G++ +  +      L  +M+  G+     + N
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +LI    +   ++ ++S   +M    + P+ S FN +I  LC  G  K+A  +    + +
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  PN I+Y+ +I G  K G     + ++ +ME     P +  Y ++I SLC+   + +A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            ++   M    + P V  Y  +V      G   +A  L +EMV   + P T  L
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTL 301


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 180/399 (45%), Gaps = 39/399 (9%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDL-VWRIYQHMLENI-RYPNEATIRTLISALC 69
           + L Q GF L +I+ N ++  +    +ND+ V   Y +M+  I   PN  T  TLI A C
Sbjct: 261 KALVQGGFGLDIITCNKILKGIWM--QNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYC 318

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G L     + D + G   +P +IV + LI  + +  R+E+G  LL   L K +  D +
Sbjct: 319 KEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVV 378

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            +S  + A VK+ +L   + +Y+ ML  G S N    +  I  +C+ G+I EA  L  ++
Sbjct: 379 GFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQI 438

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G +P   T++ LI G  K+  + +     E M+ ++  P    ++ +I  LC+ G  
Sbjct: 439 LKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLV 498

Query: 250 KQANGMLTLALDKGFSPN-----------------------------------EITYSHL 274
             A      A+++G SPN                                    +TY+ L
Sbjct: 499 GDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTIL 558

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G A+ G + E L L+++M  K   P +  Y +LI  LC+  K       F  M  +++
Sbjct: 559 IKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAV 618

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            P + IY  L+ +H  +G+   AL L   +V  G KP  
Sbjct: 619 APDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDV 657



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 172/391 (43%), Gaps = 36/391 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  S+++++ LI    KS      + +Y+ M++    P+      LI+ LCK G +   
Sbjct: 442 GFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDA 501

Query: 78  VDMLDRIHGKRCSPMV-----------------------------------IVNTSLILR 102
           +    +   +  SP V                                   +  T LI  
Sbjct: 502 LRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKG 561

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
             Q  R++E ++L  +ML+K+   D I Y  ++    K++   + L +++ M K   + +
Sbjct: 562 AAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPD 621

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
             +Y   I  +   G +E A  L   +   G KP   TFN +I      KR+++++    
Sbjct: 622 IAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFA 681

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M S +L P+   F  +I   C  G    A  M +  L++G  PN +TYS LI GY K  
Sbjct: 682 KMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQ 741

Query: 283 EIQEV-LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
            + E  LKLY EM   +I+P + +Y+ LI  LC+ G ++EA   F+      L+P V  Y
Sbjct: 742 SMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAY 801

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L+  + + G   +A+ L + M+   L P 
Sbjct: 802 TILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 167/377 (44%), Gaps = 8/377 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL  VA D       +G  L ++ F++ +    K      V +IY+ ML     PN  + 
Sbjct: 363 RLLLVALD-------KGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSC 415

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C+ G++     +  +I      P ++  ++LI    +   + +G  L + M++
Sbjct: 416 SILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIK 475

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K    DTI YS+++    K   +  AL  + + + RG S N F   T + ++C    I  
Sbjct: 476 KRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVG 535

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   M    +K    T+ +LI+G A+  R++E+L    QM+ +   P    +  +I 
Sbjct: 536 AMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLID 595

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+   +     +         +P+   Y+ LI  +++EG ++  L L+  +  +   P
Sbjct: 596 GLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKP 655

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  + ++I   C   +L++A + F  M S  L P    +  L+     +G    A+ + 
Sbjct: 656 DVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMF 715

Query: 362 EEMVSEGLKPS-TSYLC 377
            +M+ EG +P+  +Y C
Sbjct: 716 SKMLEEGPEPNLVTYSC 732



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 43/333 (12%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPM----VIVNTSLI 100
           I+ H+     + +   +  L+ +L     ++  VD     +G+ CS M      V   ++
Sbjct: 189 IFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDK----YGELCSAMREQPFSVYEFVM 244

Query: 101 LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
            R + +  +E G+   K +++     D I  + I+       ++  A   +  +++ G  
Sbjct: 245 NRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPK 304

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            N   ++T I AYC+ G +++A  L   M   G+ P    +++LI+G  KA R+E+    
Sbjct: 305 PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDG--- 361

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                               +RL            L +ALDKG   + + +S  +  Y K
Sbjct: 362 --------------------QRL------------LLVALDKGIKLDVVGFSSAMDAYVK 389

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G++  V+++Y  M  + ISP + + + LI   CQ G++ EA   F  +      P +  
Sbjct: 390 IGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILT 449

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           Y +L+    + GN     +L E+M+ +  +P T
Sbjct: 450 YSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDT 482



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 36/229 (15%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +  ++ +RG    + +FNT+I       R D   +++  M      PN  T   L
Sbjct: 639 EAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTIL 698

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A C+ G                                   R+++ M++  +ML +  
Sbjct: 699 IDAFCREG-----------------------------------RMDDAMLMFSKMLEEGP 723

Query: 125 IHDTIAYSLIVYAKVKMRN-LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
             + + YS +++   K ++ +ES L +Y EML+   + N   Y+  I   C+ G ++EA+
Sbjct: 724 EPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEAS 783

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           C  +   +  L P    + +LI G  K  R+ E++   + M+  +L P 
Sbjct: 784 CAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 174/359 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG   ++ ++  LI  +++  + ++   +Y  ML+    PN  T   LI+ LC GG+
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
             T + +   + G            +I  +     IE+ MVL ++ML+   +   + Y+ 
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 490

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   +   N+ +A  + + M + G   + + Y   +  + ++GK+E A+   QEM   G
Sbjct: 491 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 550

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   ++  LI+G +K  +++ +LS  E+M      P+  ++N +I  L +     +A 
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAE 610

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G  PN ITY+ LI G  + G  Q   K++++ME +   P L  Y+SLI  L
Sbjct: 611 KICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 670

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           CQ GK +EA+   K M+   L P    + SL+   +  G    A  L   MV  G KP+
Sbjct: 671 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 166/371 (44%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A ++ + +   G   SL++FNTLI++++K  +      I   + +    P+  T  
Sbjct: 220 MVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYT 279

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +LI   C+   L     + DR+  + C P  +  ++LI  +  E R++E + +L+ M+ K
Sbjct: 280 SLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 339

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +      Y+L + A   + + E A+ +   M KRG   N   YT  I      GK+E A
Sbjct: 340 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 399

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  +M   GL P   T+N LI       R   +L     M     L +   +NE+I+ 
Sbjct: 400 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 459

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G+ ++A  +    L  G  P  +TY+ LI GY  +G +    +L   M+     P 
Sbjct: 460 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 519

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y  L+S   + GKLE A  YF+ M    L P    Y +L+  H + G    AL L E
Sbjct: 520 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLE 579

Query: 363 EMVSEGLKPST 373
            M   G  P+ 
Sbjct: 580 RMEEMGCNPNV 590



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 168/363 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  ++AF V   + + G   + ++++TLI+ +    R D    + + M+E    P   T 
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              I+ALC     +  ++++ R+  + C P V   T+LI  + +  ++E  + L  +ML+
Sbjct: 349 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++ +T+ Y+ ++          +AL ++  M   G  AN+  Y   I   C  G IE+
Sbjct: 409 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 468

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L ++M   G  P   T+N LI G      +  +    + M      P    +NE++ 
Sbjct: 469 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 528

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              + G  + A+      ++ G +PN ++Y+ LI G++K+G++   L L   ME    +P
Sbjct: 529 GFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNP 588

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            + +Y ++I+ L +  +  EA+K    M    L+P V  Y +L+      G    A  + 
Sbjct: 589 NVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 648

Query: 362 EEM 364
            +M
Sbjct: 649 HDM 651



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 171/428 (39%), Gaps = 59/428 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            EVA  +   + + G   + +++N LI+ +    R     +I+  M  +    N  T   
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC GG ++  + + +++      P V+   +LI   + +  +     LL  M    
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D   Y+ +V    K   LESA   ++EM++ G + N   YTT I  + + GK++ A 
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM------------------ 225
            L++ ME  G  P  E++N +I G +K  R  E+   C++M                   
Sbjct: 576 SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635

Query: 226 -----------------SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                             RK LP+   ++ +I  LC+ G A +A  +L     KG +P+E
Sbjct: 636 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 695

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC-QCGKLE------- 320
           +T++ LI G+   G I     L   M      P    Y+ L+  L  +C  LE       
Sbjct: 696 VTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH 755

Query: 321 ---------EADKYFKI-------MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
                    E D  F+I       M      P +D Y +LV     KG   +A  L ++M
Sbjct: 756 EAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 815

Query: 365 VSEGLKPS 372
              G  P 
Sbjct: 816 KERGFCPD 823



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 165/368 (44%), Gaps = 11/368 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  +   +E+ G + ++ S+N +I+ ++K +R     +I   M E    PN  T  TL
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC+ G+ Q    +   +  ++C P +   +SLI  + QE + +E  +LLK M RK +
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + ++ ++   V +  ++ A ++   M+  G   N   Y+  +    +   + E   
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKV 751

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            +Q        P+++  N  I     A+  E     CE        P+   ++ ++  LC
Sbjct: 752 AVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIG---CE--------PTLDTYSTLVSGLC 800

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A  ++    ++GF P+   Y  L+  + K  E+   LK+++ +E K     L 
Sbjct: 801 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 860

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI +LC+ G++EEA   F  M          ++  LV   L++G     + L   M
Sbjct: 861 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 920

Query: 365 VSEGLKPS 372
            S+   P+
Sbjct: 921 ESKNFTPN 928



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 147/314 (46%), Gaps = 1/314 (0%)

Query: 61  IRTLISALCKGGQ-LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           IR L+   C+  + ++   D L+ I G      +    +L++++ + E +E    L K+M
Sbjct: 172 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 231

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L   +    + ++ ++    K   +  A ++  ++ +   S + F YT+ I  +C    +
Sbjct: 232 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 291

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           + A  +   M   G  P   T++ LI G     R++E+L   E+M+ + + P+   +   
Sbjct: 292 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 351

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC   + ++A  ++     +G  PN  TY+ LI G ++ G+++  + LY++M  + +
Sbjct: 352 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y +LI+ LC  G+   A K F  M+ H  +     Y  ++      G+  KA+ 
Sbjct: 412 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 471

Query: 360 LCEEMVSEGLKPST 373
           L E+M+  G  P+ 
Sbjct: 472 LFEKMLKMGPLPTV 485



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 31/357 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  +C  + ++G   ++I++ TLI  + ++ R    ++I+  M +    PN  T  +
Sbjct: 606 FSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 665

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC+ G+      +L  +  K  +P  +  TSLI   +   RI+   +LL+RM+   
Sbjct: 666 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG 725

Query: 124 MIHDTIAYS----------LIVYAKVKMR--------------NLESALVVYEEMLKRGF 159
              +   YS          L++  KV ++              N E    +   M + G 
Sbjct: 726 CKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGC 785

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF-NLLIEGCAKAKRIEESL 218
                 Y+T +   C  G+  EA  L+++M+  G  P  E + +LLI  C K   ++ +L
Sbjct: 786 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC-KNLEVDHAL 844

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                + ++      S +  +I  LC+ G  ++A  +    L+K ++ +EI ++ L+ G 
Sbjct: 845 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE----ADKYFKIMKS 331
            KEGE+   +KL + ME K+ +P +  Y  L   L + GK  E    ADK  K++K 
Sbjct: 905 LKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADK-LKVLKD 960


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 174/358 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V     + G+    I+F+TL++      R      +   M+E  + P+  T+ TLI+
Sbjct: 153 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 212

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G++   + ++DR+      P  +    ++ R+ +       + L ++M  +N+  
Sbjct: 213 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 272

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + YS+++ +  K  + + AL ++ EM  +G  A+   Y++ IG  C  GK ++   ++
Sbjct: 273 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 332

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   TF+ LI+   K  ++ E+     +M++R + P    +N +I   C+ 
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 392

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +AN M  L + KG  P+ +TYS LI  Y K   + + ++L+ E+  K + P    Y
Sbjct: 393 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 452

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +L+   CQ GKL  A + F+ M S  + P V  Y  L+    + G   KAL + E+M
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 510



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 176/355 (49%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF    +++  +++ + KS  + L   +++ M E     +      +I +LCK G     
Sbjct: 234 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 293

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + + +  K     V+  +SLI  +  + + ++G  +L+ M+ +N+I D + +S ++  
Sbjct: 294 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 353

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK   L  A  +Y EM+ RG + ++  Y + I  +C+   + EAN +   M + G +P 
Sbjct: 354 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 413

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI    KAKR+++ +    ++ S+ L+P+   +N ++   C+ G    A  +  
Sbjct: 414 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 473

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G  P+ +TY  L+ G    GE+ + L+++ +M+   ++  +  Y  +I  +C   
Sbjct: 474 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 533

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K+++A   F  +    + P V  Y  ++G   +KG+ ++A  L  +M  +G  P 
Sbjct: 534 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 588



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 176/370 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++    C+ +E  G    + +   +I+   +  +    + +     +    P+  T  T
Sbjct: 115 YDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFST 174

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++  C  G++   V ++DR+   +  P ++  ++LI  +  + R+ E +VL+ RM+   
Sbjct: 175 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 234

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y  ++    K  N   AL ++ +M +R   A+   Y+  I + C+ G  ++A 
Sbjct: 235 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 294

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EME  G+K    T++ LI G     + ++      +M+ R ++P    F+ +I   
Sbjct: 295 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 354

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G   +A  +    + +G +P+ ITY+ LI G+ KE  + E  +++  M  K   P +
Sbjct: 355 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 414

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI+S C+  ++++  + F+ + S  L+P    Y +LV    + G    A  L +E
Sbjct: 415 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 474

Query: 364 MVSEGLKPST 373
           MVS G+ PS 
Sbjct: 475 MVSRGVPPSV 484



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 157/350 (44%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I FN L   V ++ + DLV    + M  N    +  T+  +I+  C+  +L     +L R
Sbjct: 100 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 159

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
                  P  I  ++L+     E R+ E + L+ RM+      D +  S ++        
Sbjct: 160 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 219

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  ALV+ + M++ GF  +   Y   +   C+ G    A  L ++ME   +K     +++
Sbjct: 220 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 279

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+   K    +++LS   +M  + +      ++ +I  LC  G       ML   + + 
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ +T+S LI  + KEG++ E  +LY EM  + I+P    Y SLI   C+   L EA+
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 399

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + F +M S    P +  Y  L+  + +       + L  E+ S+GL P+T
Sbjct: 400 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 449



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 144/309 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  +   +E +G    ++++++LI  +    + D   ++ + M+     P+  T   
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    K G+L    ++ + +  +  +P  I   SLI    +E  + E   +   M+ K 
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + YS+++ +  K + ++  + ++ E+  +G   N+  Y T +  +C+ GK+  A 
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L QEM + G+ P   T+ +L++G      + ++L   E+M   ++      +N +I  +
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C       A  +     DKG  P+ +TY+ +IGG  K+G + E   L+ +M+    +P  
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589

Query: 304 PAYTSLISS 312
             Y  LI +
Sbjct: 590 FTYNILIRA 598



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 139/301 (46%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++   +D+ + +   R  P  I    L   + + ++ +  +   K M    + HD    +
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    + + L  A  V     K G+  ++  ++T +  +C  G++ EA  L+  M   
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   T + LI G     R+ E+L   ++M+     P    +  ++ RLC+ GN+  A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +     ++    + + YS +I    K+G   + L L+ EME K I   +  Y+SLI  
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  GK ++  K  + M   +++P V  + +L+ + +++G   +A  L  EM++ G+ P 
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 373 T 373
           T
Sbjct: 379 T 379



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 144/304 (47%), Gaps = 3/304 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +  R     +++F+ LI V  K  +      +Y  M+     P+  T  +LI   CK 
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 392

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             L     M D +  K C P ++  + LI    + +R+++GM L + +  K +I +TI Y
Sbjct: 393 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 452

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +V    +   L +A  +++EM+ RG   +   Y   +   C+ G++ +A  + ++M+ 
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 512

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + +      +N++I G   A +++++ S    +  + + P    +N MI  LC+ G+  +
Sbjct: 513 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 572

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME---YKSISPTLPAYTS 308
           A+ +     + G +P++ TY+ LI  +     +   ++L  EM+   + + S T+     
Sbjct: 573 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632

Query: 309 LISS 312
           ++S 
Sbjct: 633 MLSD 636



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 42/224 (18%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MRLF       R +  +G   + I++NTL+    +S + +    ++Q M+     P+  T
Sbjct: 434 MRLF-------REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 486

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+  LC  G+L   +++ ++                    +Q+ R+  G+ +     
Sbjct: 487 YGILLDGLCDNGELNKALEIFEK--------------------MQKSRMTLGIGI----- 521

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                     Y++I++       ++ A  ++  +  +G   +   Y   IG  C+ G + 
Sbjct: 522 ----------YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 571

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           EA+ L ++M+  G  P D T+N+LI        +  S+   E+M
Sbjct: 572 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 174/358 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V     + G+    I+F+TL++      R      +   M+E  + P+  T+ TLI+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G++   + ++DR+      P  +    ++ R+ +       + L ++M  +N+  
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + YS+++ +  K  + + AL ++ EM  +G  A+   Y++ IG  C  GK ++   ++
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   TF+ LI+   K  ++ E+     +M++R + P    +N +I   C+ 
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +AN M  L + KG  P+ +TYS LI  Y K   + + ++L+ E+  K + P    Y
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +L+   CQ GKL  A + F+ M S  + P V  Y  L+    + G   KAL + E+M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 176/355 (49%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF    +++  +++ + KS  + L   +++ M E     +      +I +LCK G     
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + + +  K     V+  +SLI  +  + + ++G  +L+ M+ +N+I D + +S ++  
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK   L  A  +Y EM+ RG + ++  Y + I  +C+   + EAN +   M + G +P 
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI    KAKR+++ +    ++ S+ L+P+   +N ++   C+ G    A  +  
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G  P+ +TY  L+ G    GE+ + L+++ +M+   ++  +  Y  +I  +C   
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K+++A   F  +    + P V  Y  ++G   +KG+ ++A  L  +M  +G  P 
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 176/370 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++    C+ +E  G    + +   +I+   +  +    + +     +    P+  T  T
Sbjct: 86  YDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFST 145

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++  C  G++   V ++DR+   +  P ++  ++LI  +  + R+ E +VL+ RM+   
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y  ++    K  N   AL ++ +M +R   A+   Y+  I + C+ G  ++A 
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EME  G+K    T++ LI G     + ++      +M+ R ++P    F+ +I   
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G   +A  +    + +G +P+ ITY+ LI G+ KE  + E  +++  M  K   P +
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI+S C+  ++++  + F+ + S  L+P    Y +LV    + G    A  L +E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445

Query: 364 MVSEGLKPST 373
           MVS G+ PS 
Sbjct: 446 MVSRGVPPSV 455



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 157/350 (44%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I FN L   V ++ + DLV    + M  N    +  T+  +I+  C+  +L     +L R
Sbjct: 71  IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
                  P  I  ++L+     E R+ E + L+ RM+      D +  S ++        
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  ALV+ + M++ GF  +   Y   +   C+ G    A  L ++ME   +K     +++
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+   K    +++LS   +M  + +      ++ +I  LC  G       ML   + + 
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ +T+S LI  + KEG++ E  +LY EM  + I+P    Y SLI   C+   L EA+
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + F +M S    P +  Y  L+  + +       + L  E+ S+GL P+T
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 144/309 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  +   +E +G    ++++++LI  +    + D   ++ + M+     P+  T   
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    K G+L    ++ + +  +  +P  I   SLI    +E  + E   +   M+ K 
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + YS+++ +  K + ++  + ++ E+  +G   N+  Y T +  +C+ GK+  A 
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L QEM + G+ P   T+ +L++G      + ++L   E+M   ++      +N +I  +
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C       A  +     DKG  P+ +TY+ +IGG  K+G + E   L+ +M+    +P  
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560

Query: 304 PAYTSLISS 312
             Y  LI +
Sbjct: 561 FTYNILIRA 569



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 139/301 (46%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++   +D+ + +   R  P  I    L   + + ++ +  +   K M    + HD    +
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    + + L  A  V     K G+  ++  ++T +  +C  G++ EA  L+  M   
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   T + LI G     R+ E+L   ++M+     P    +  ++ RLC+ GN+  A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +     ++    + + YS +I    K+G   + L L+ EME K I   +  Y+SLI  
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  GK ++  K  + M   +++P V  + +L+ + +++G   +A  L  EM++ G+ P 
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 373 T 373
           T
Sbjct: 350 T 350



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 144/304 (47%), Gaps = 3/304 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +  R     +++F+ LI V  K  +      +Y  M+     P+  T  +LI   CK 
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             L     M D +  K C P ++  + LI    + +R+++GM L + +  K +I +TI Y
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +V    +   L +A  +++EM+ RG   +   Y   +   C+ G++ +A  + ++M+ 
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + +      +N++I G   A +++++ S    +  + + P    +N MI  LC+ G+  +
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME---YKSISPTLPAYTS 308
           A+ +     + G +P++ TY+ LI  +     +   ++L  EM+   + + S T+     
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603

Query: 309 LISS 312
           ++S 
Sbjct: 604 MLSD 607



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 42/224 (18%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MRLF       R +  +G   + I++NTL+    +S + +    ++Q M+     P+  T
Sbjct: 405 MRLF-------REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+  LC  G+L   +++ ++                    +Q+ R+  G+ +     
Sbjct: 458 YGILLDGLCDNGELNKALEIFEK--------------------MQKSRMTLGIGI----- 492

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                     Y++I++       ++ A  ++  +  +G   +   Y   IG  C+ G + 
Sbjct: 493 ----------YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           EA+ L ++M+  G  P D T+N+LI        +  S+   E+M
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 188/402 (46%), Gaps = 35/402 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+    ++QRG   ++++++TLI    K+       + +  M+     PNE T  +LI 
Sbjct: 340 AFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLID 399

Query: 67  ALCKGGQLQ-------------------TYVDMLD------------RIHGKRCSPMVIV 95
           A CK G L                    TY  +LD             + G        +
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459

Query: 96  N----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
           N    TSL    I+ + +E+ M +L+ M +KN+  D + Y   ++   +   +E ++ V 
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVI 519

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM+  G +ANS++YTT I AY + GK  EA  L+QEM++ G+K    T+ +LI+G  K 
Sbjct: 520 REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKI 579

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             +++++ Y + M    L P+   +  +I  LC+    ++A  +    LDKG SP+++ Y
Sbjct: 580 GLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVY 639

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI G  K G   E L L   M    +   L AYTSLI    + G+++ A      M  
Sbjct: 640 TSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLR 699

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             ++P   +   L+  + E G+  +AL L ++M   GL   T
Sbjct: 700 KGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGT 741



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 154/336 (45%), Gaps = 5/336 (1%)

Query: 37  DRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN 96
           D  D++W        N+  P      TL + L   G L+       +++  R  P V   
Sbjct: 165 DFFDMLWST-----RNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSC 219

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             L+ R+ +  +    +   K M+   +      Y++++    +  +LE+A  ++EEM  
Sbjct: 220 NELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKA 279

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           +G   +   Y + I  Y + G +  A  + +EM++AG +P   T+N LI    K +RI +
Sbjct: 280 KGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQ 339

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +  Y   M  R L P+   ++ +I   C+ G   +AN      +  G  PNE TY+ LI 
Sbjct: 340 AFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLID 399

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K G++ E  KL  EM+   ++  +  YT+L+  LC+ G++ EA++ F  +       
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              IY SL   +++     KA+ + EEM  + LKP 
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPD 495



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 170/390 (43%), Gaps = 35/390 (8%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S S+ ++N +I  + +    +    +++ M      P+  T  +LI    K G L   
Sbjct: 246 GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGA 305

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V + + +    C P VI   SLI    + ERI +    L  M ++ +  + + YS ++ A
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG---- 193
             K   L  A   + +M++ G   N F YT+ I A C+ G + EA  L  EM+ AG    
Sbjct: 366 FCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425

Query: 194 ----------------LKPYDETFNLLIE---------------GCAKAKRIEESLSYCE 222
                           ++  +E F  L++               G  KAK +E+++   E
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILE 485

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M  + L P    +   I  LC     + +  ++   +D G + N   Y+ LI  Y K G
Sbjct: 486 EMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVG 545

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +  E + L  EM+   I  T+  Y  LI  LC+ G +++A +YF  M  + L P + IY 
Sbjct: 546 KTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYT 605

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+    +     +A +L  EM+ +G+ P 
Sbjct: 606 ALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 166/368 (45%), Gaps = 8/368 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   ++  G    +I++N+LI+   K +R    +     M +    PN  T  TLI 
Sbjct: 305 AVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLID 364

Query: 67  ALCKGGQL----QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           A CK G L    + +VDM+ R+      P     TSLI    +   + E   L   M + 
Sbjct: 365 AFCKAGMLLEANKFFVDMI-RVG---LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQA 420

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + Y+ ++    +   +  A  ++  +LK G++ N  +YT+    Y +   +E+A
Sbjct: 421 GVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKA 480

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +++EM    LKP    +   I G  +   IE+S++   +MM   L  +   +  +I  
Sbjct: 481 MDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDA 540

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + G   +A  +L    D G     +TY  LI G  K G +Q+ ++ +  M    + P 
Sbjct: 541 YFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPN 600

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT+LI  LC+   LEEA   F  M    + P   +Y SL+  +++ GN  +AL L  
Sbjct: 601 IMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRN 660

Query: 363 EMVSEGLK 370
            MV  G++
Sbjct: 661 RMVEIGME 668



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 2/205 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + ++  G  ++++++  LI  + K        R + HM  N   PN      LI 
Sbjct: 550 AVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALID 609

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK   L+   ++ + +  K  SP  +V TSLI   ++     E + L  RM+   M  
Sbjct: 610 GLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMEL 669

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  AY+ +++   +   ++ A  + +EML++G   +  +    +  Y E G I EA  L 
Sbjct: 670 DLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALH 729

Query: 187 QEMENAGLKPYDETFNLLIEGCAKA 211
            +M   GL     T ++ +  C  A
Sbjct: 730 DDMARRGL--ISGTIDITVPSCLTA 752



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 111/251 (44%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++ E A D+   + ++     L+ + T I  + + +  +    + + M++     N    
Sbjct: 475 KMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIY 534

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI A  K G+    V++L  +        V+    LI  + +   +++ +     M R
Sbjct: 535 TTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTR 594

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  + + Y+ ++    K   LE A  ++ EML +G S +  VYT+ I    ++G   E
Sbjct: 595 NGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGE 654

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L   M   G++     +  LI G ++  +++ + S  ++M+ + ++P       ++R
Sbjct: 655 ALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLR 714

Query: 242 RLCECGNAKQA 252
           +  E G+  +A
Sbjct: 715 KYYELGDINEA 725



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 39/181 (21%)

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G   +D  FN+L++       +EE+     +M   ++LP   + NE++ RL     +K +
Sbjct: 180 GFGVFDTLFNVLVD----LGMLEEARQCFWKMNKFRVLPKVRSCNELLHRL-----SKSS 230

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            G L L+                               + +M    +SP++  Y  +I  
Sbjct: 231 KGGLALSF------------------------------FKDMVVAGLSPSVFTYNMVIGC 260

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L + G LE A   F+ MK+  L P +  Y SL+  + + G    A+ + EEM   G +P 
Sbjct: 261 LAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPD 320

Query: 373 T 373
            
Sbjct: 321 V 321


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 180/393 (45%), Gaps = 37/393 (9%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  + L+++  L+  + K  + D V    +  L +   PN  T   LI ALCK   +  
Sbjct: 338 RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDE 397

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLIV 135
              +L  +  K  SP V+  +S+I   ++   +++     KRM+++  I+ + + Y  ++
Sbjct: 398 AEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEYKRMMKERGINPNVVTYGTLI 456

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K +  ++AL VY +ML  G   N F+  + +    + GKIEEA  L ++   +GL 
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +  LI+G  KA  +  +  + +++M R +LP    +N  I  LC  G  K+A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           LT   + G  P++ TY+ +I  + ++GE  + LKL +EM+  SI P L  Y +L++ L  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 316 CGKLEEADKYFKIMKSHSLVPG--------------------VDIYESLV--GIHLE--- 350
            G +E+A      M S    P                     +DI+E ++  G+H +   
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 351 ----------KGNKAKALHLCEEMVSEGLKPST 373
                      G   KA  + EEM+  G+ P T
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 184/408 (45%), Gaps = 37/408 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATI 61
           L + A +  R +++RG + +++++ TLI    K    D    +Y  ML E ++  N+  +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV-NKFIV 487

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L++ L + G+++  + +     G   S   +  T+LI  + +   +       + ++ 
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 122 KNMIHDTIAYSLIV-----YAKVK--------MRNL----------------------ES 146
           +NM+ D + Y++ +       K K        MRN+                        
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +  EM       N   Y T +      G +E+A  L+ EM +AG  P   T   +++
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
            C++++R++  L   E MM+  L    + +N +++ LC  G  ++A  +L   L  G +P
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + IT++ LI G+ K   +      Y +M +++ISP +  + +L+  L   G++ EA    
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             M+   L P    Y+ L   H ++ NK +A+ L  EMV +G  P  S
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 167/360 (46%), Gaps = 11/360 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQ-----HMLENIRYPNEATIRTLISALCK 70
           +RG     ++ NTL+  + ++ + D    +       H L+ I +       TLI+  C+
Sbjct: 128 KRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGW------NTLIAGYCR 181

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G     + + DR+  +     V+   +L+    +  +++    +L  M    +  +   
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+  +    + + +E A  +YE M++ G   +    +  +   C  G+  EA  L +EM+
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P   T+  LI+  AKA R +E LS   +M+SR ++     +  ++  L + G   
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +    L  AL    SPN +TY+ LI    K   + E  ++  EME KSISP +  ++S+I
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +   + G L++A +Y ++MK   + P V  Y +L+    +   +  AL +  +M+ EG+K
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 140/290 (48%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+++T  T+I + C+ G+    + +L  +      P +I   +L+  +     +E+   L
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M+       ++ +  ++ A  + R L+  L ++E M+  G  A+  VY T +   C 
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +G   +A  +++EM  +G+ P   TFN LI G  K+  ++ + +   QM+ + + P+ + 
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN ++  L   G   +A  +L      G  PN +TY  L  G+ K+    E ++LY EM 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            K   P +  Y +LIS   + G + +A + FK M+   + P    Y+ LV
Sbjct: 827 GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 175/368 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AFD+   + + G  L +++ + L+  + +  R    + +++ M +    PN  T  TL
Sbjct: 256 EEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTL 315

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +L K G+ +  + +L  +  +     ++  T+L+  + ++ + +E    L+  L  N+
Sbjct: 316 IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL 375

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y++++ A  K  N++ A  V  EM ++  S N   +++ I  + + G +++A  
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             + M+  G+ P   T+  LI+G  K +  + +L     M+   +  +    + ++  L 
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLR 495

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +   A   G S + + Y+ LI G  K G++    K   E+  +++ P   
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y   I+ LC  GK +EA  +   M++  L P    Y +++  H  KG  AKAL L  EM
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 365 VSEGLKPS 372
               +KP+
Sbjct: 616 KMSSIKPN 623



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 8/365 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK-GG 72
           +E++  S ++++F+++I+   K    D      + M E    PN  T  TLI    K  G
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 73  Q---LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           Q   L+ Y DML    G + +  ++   SL+  + Q  +IEE M L K      +  D +
Sbjct: 465 QDAALEVYHDML--CEGVKVNKFIV--DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++    K  ++ +A    +E++ R    ++ VY  FI   C  GK +EA   + EM
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            N GLKP   T+N +I    +     ++L    +M    + P+   +N ++  L   G  
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +L   +  GFSP+ +T+  ++   ++   +  +L ++  M    +   +  Y +L
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC  G   +A    + M    + P    + +L+  H +  +   A     +M+ + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 370 KPSTS 374
            P+ +
Sbjct: 761 SPNIA 765



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 154/364 (42%), Gaps = 3/364 (0%)

Query: 9   DVCRYLEQRG---FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D    L  RG    +L +I +NTLI    +         +   M       +     TL+
Sbjct: 152 DAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           +  C+ GQ+     +LD +      P V   T  I+   + + +EE   L + M+R  ++
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D +  S +V    +      A  ++ EM K G + N   Y T I +  + G+ +E   L
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM + G+     T+  L++   K  + +E        +S  L P+   +  +I  LC+
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             N  +A  +L    +K  SPN +T+S +I G+ K G + +  +    M+ + I+P +  
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI    +    + A + +  M    +     I +SLV    + G   +A+ L ++  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 366 SEGL 369
             GL
Sbjct: 512 GSGL 515



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 130/321 (40%), Gaps = 40/321 (12%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T+ TL++ LC+ GQ+     + DR  G                                 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGG--------------------------------- 163

Query: 120 LRKNMIH--DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
                IH  D I ++ ++    ++ +  +AL V + M  +G   +   Y T +  +C  G
Sbjct: 164 -----IHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG 218

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +++ A  ++  M+ AG+ P   T+   I    + K +EE+    E M+   +L      +
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  LC  G   +A  +       G +PN +TY  LI   AK G  +E+L L  EM  +
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            +   L  YT+L+  L + GK +E     +   S +L P    Y  L+    +  N  +A
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398

Query: 358 LHLCEEMVSEGLKPSTSYLCS 378
             +  EM  + + P+     S
Sbjct: 399 EQVLLEMEEKSISPNVVTFSS 419



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 2/272 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +LI++NTL+  +  +   +    +   M+     P+  T R ++ A  +  +L   +D+ 
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +        + V  +L+  +       +  V+L+ ML   +  DTI ++ ++    K 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L++A   Y +ML +  S N   + T +G     G+I EA  ++ EME +GL+P + T+
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 202 NLLIEGCAK-AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++L  G  K + ++E    YCE M+ +  +P  S +N +I    + G   QA  +     
Sbjct: 803 DILATGHGKQSNKVEAMRLYCE-MVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQ 861

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
            +G  P   TY  L+ G+      Q+    Y+
Sbjct: 862 KRGVHPTSCTYDILVSGWYDLAREQKSQNTYF 893



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 8/220 (3%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  +V  D+  ++   G    +  +NTL+ V+           + + ML +   P+  T 
Sbjct: 673 RRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITF 732

Query: 62  RTLISALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             LI   CK   L     TY  ML     +  SP +    +L+  +    RI E   +L 
Sbjct: 733 NALILGHCKSSHLDNAFATYAQMLH----QNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M +  +  + + Y ++     K  N   A+ +Y EM+ +GF      Y   I  + + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
            + +A  L ++M+  G+ P   T+++L+ G     R ++S
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKS 888



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 11/253 (4%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  + + ++Y+  ++R L  A+      L R     +  Y   + A  ++     A  ++
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIA-----LLRSSRPTTVAYNILLAALSDHA---HAPAVL 123

Query: 187 QEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM   G+ P+D  T N L+ G  +  +++ + +  ++      L     +N +I   C 
Sbjct: 124 AEMCKRGV-PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCR 181

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+   A  +      +G   + + Y+ L+ G+ + G++     +   M+   + P +  
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT  I   C+   +EEA   ++ M  + ++  V    +LV      G  ++A  L  EM 
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 366 SEGLKPSTSYLCS 378
             G  P+    C+
Sbjct: 302 KVGAAPNHVTYCT 314


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 180/394 (45%), Gaps = 37/394 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  + L+++  L+  + K  + D V    +  L +   PN  T   LI ALCK   + 
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLI 134
               +L  +  K  SP V+  +S+I   ++   +++     KRM+++  I+ + + Y  +
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEYKRMMKERGINPNVVTYGTL 455

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K +  ++AL VY +ML  G   N F+  + +    + GKIEEA  L ++   +GL
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                 +  LI+G  KA  +  +  + +++M R +LP    +N  I  LC  G  K+A  
Sbjct: 516 SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKS 575

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
            LT   + G  P++ TY+ +I  + ++GE  + LKL +EM+  SI P L  Y +L++ L 
Sbjct: 576 FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF 635

Query: 315 QCGKLEEADKYFKIMKSHSLVPG--------------------VDIYESLV--GIHLE-- 350
             G +E+A      M S    P                     +DI+E ++  G+H +  
Sbjct: 636 GTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 351 -----------KGNKAKALHLCEEMVSEGLKPST 373
                       G   KA  + EEM+  G+ P T
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 3/332 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+++T  T+I + C+ G+    + +L  +      P +I   +L+  +     +E+   L
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M+       ++ +  ++ A  + R L+  L ++E M+  G  A+  VY T +   C 
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +G   +A  +++EM  +G+ P   TFN LI G  K+  ++ + +   QM+ + + P+ + 
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN ++  L   G   +A  +L      G  PN +TY  L  G+ K+    E ++LY EM 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K   P +  Y +LIS   + G + +A + FK M+   + P    Y+ LV       N  
Sbjct: 827 GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGT 886

Query: 356 KALHLCEEMVSEGLKPST---SYLCSASTCRG 384
           +     ++M  +G  PS    S++C A +  G
Sbjct: 887 EVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 184/408 (45%), Gaps = 37/408 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATI 61
           L + A +  R +++RG + +++++ TLI    K    D    +Y  ML E ++  N+  +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV-NKFIV 487

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L++ L + G+++  + +     G   S   +  T+LI  + +   +       + ++ 
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 122 KNMIHDTIAYSLIV-----YAKVK--------MRNL----------------------ES 146
           +NM+ D + Y++ +       K K        MRN+                        
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +  EM       N   Y T +      G +E+A  L+ EM +AG  P   T   +++
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
            C++++R++  L   E MM+  L    + +N +++ LC  G  ++A  +L   L  G +P
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + IT++ LI G+ K   +      Y +M +++ISP +  + +L+  L   G++ EA    
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             M+   L P    Y+ L   H ++ NK +A+ L  EMV +G  P  S
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 175/368 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AFD+   + + G  L +++ + L+  + +  R    + +++ M +    PN  T  TL
Sbjct: 256 EEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTL 315

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +L K G+ +  + +L  +  +     ++  T+L+  + ++ + +E    L+  L  N+
Sbjct: 316 IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL 375

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y++++ A  K  N++ A  V  EM ++  S N   +++ I  + + G +++A  
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             + M+  G+ P   T+  LI+G  K +  + +L     M+   +  +    + ++  L 
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLR 495

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +   A   G S + + Y+ LI G  K G++    K   E+  +++ P   
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y   I+ LC  GK +EA  +   M++  L P    Y +++  H  KG  AKAL L  EM
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 365 VSEGLKPS 372
               +KP+
Sbjct: 616 KMSSIKPN 623



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 141/299 (47%)

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G     + + DR+  +     V+   +L+    +  +++    +L  M    +  +   Y
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           +  +    + + +E A  +YE M++ G   +    +  +   C  G+  EA  L +EM+ 
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G  P   T+  LI+  AKA R +E LS   +M+SR ++     +  ++  L + G   +
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
               L  AL    SPN +TY+ LI    K   + E  ++  EME KSISP +  ++S+I+
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              + G L++A +Y ++MK   + P V  Y +L+    +   +  AL +  +M+ EG+K
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 8/365 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK-GG 72
           +E++  S ++++F+++I+   K    D      + M E    PN  T  TLI    K  G
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 73  Q---LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           Q   L+ Y DML    G + +  ++   SL+  + Q  +IEE M L K      +  D +
Sbjct: 465 QDAALEVYHDML--CEGVKVNKFIV--DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++    K  ++ +A    +E++ R    ++ VY  FI   C  GK +EA   + EM
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            N GLKP   T+N +I    +     ++L    +M    + P+   +N ++  L   G  
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +L   +  GFSP+ +T+  ++   ++   +  +L ++  M    +   +  Y +L
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC  G   +A    + M    + P    + +L+  H +  +   A     +M+ + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 370 KPSTS 374
            P+ +
Sbjct: 761 SPNIA 765



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 143/307 (46%), Gaps = 2/307 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +LI++NTL+  +  +   +    +   M+     P+  T R ++ A  +  +L   +D+ 
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +        + V  +L+  +       +  V+L+ ML   +  DTI ++ ++    K 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L++A   Y +ML +  S N   + T +G     G+I EA  ++ EME +GL+P + T+
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 202 NLLIEGCAK-AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++L  G  K + ++E    YCE M+ +  +P  S +N +I    + G   QA  +     
Sbjct: 803 DILATGHGKQSNKVEAMRLYCE-MVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQ 861

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G  P   TY  L+ G+++     EV K   +M+ K  SP+    + +  +  + G   
Sbjct: 862 KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 321 EADKYFK 327
           +A +  K
Sbjct: 922 QAQRLLK 928



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 137/307 (44%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++  C+ GQ+     +LD +      P V   T  I+   + + +EE   L + M+R 
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN 268

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D +  S +V    +      A  ++ EM K G + N   Y T I +  + G+ +E 
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKEL 328

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+ EM + G+     T+  L++   K  + +E        +S  L P+   +  +I  
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+  N  +A  +L    +K  SPN +T+S +I G+ K G + +  +    M+ + I+P 
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y +LI    +    + A + +  M    +     I +SLV    + G   +A+ L +
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 363 EMVSEGL 369
           +    GL
Sbjct: 509 DASGSGL 515



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 104/236 (44%)

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           +  +AL V + M  +G   +   Y T +  +C  G+++ A  ++  M+ AG+ P   T+ 
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
             I    + K +EE+    E M+   +L      + ++  LC  G   +A  +       
Sbjct: 244 PFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKV 303

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G +PN +TY  LI   AK G  +E+L L  EM  + +   L  YT+L+  L + GK +E 
Sbjct: 304 GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEV 363

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
               +   S +L P    Y  L+    +  N  +A  +  EM  + + P+     S
Sbjct: 364 KDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 8/259 (3%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  +V  D+  ++   G    +  +NTL+ V+           + + ML +   P+  T 
Sbjct: 673 RRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITF 732

Query: 62  RTLISALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             LI   CK   L     TY  ML     +  SP +    +L+  +    RI E   +L 
Sbjct: 733 NALILGHCKSSHLDNAFATYAQMLH----QNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M +  +  + + Y ++     K  N   A+ +Y EM+ +GF      Y   I  + + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            + +A  L ++M+  G+ P   T+++L+ G ++ +   E     + M  +   PS    +
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 238 EMIRRLCECGNAKQANGML 256
            + R   + G   QA  +L
Sbjct: 909 FICRAFSKPGMTWQAQRLL 927



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 49/254 (19%), Positives = 105/254 (41%), Gaps = 13/254 (5%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  + + ++Y+  ++R L  A+      L R     +  Y   + A  ++     A  ++
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIA-----LLRSSRPTTVAYNILLAALSDHA---HAPAVL 123

Query: 187 QEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM-IRRLC 244
            EM   G+ P+D  T N L+ G  +  +++ + +      +  + P  S+   + +  + 
Sbjct: 124 AEMCKRGV-PFDGVTVNTLLAGLCRNGQVDAAAA--LADRAGGITPWMSSAGTLSLLDIA 180

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+   A  +      +G   + + Y+ L+ G+ + G++     +   M+   + P + 
Sbjct: 181 GFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT  I   C+   +EEA   ++ M  + ++  V    +LV      G  ++A  L  EM
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 365 VSEGLKPSTSYLCS 378
              G  P+    C+
Sbjct: 301 DKVGAAPNHVTYCT 314


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 175/380 (46%), Gaps = 3/380 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +C  + +RG  L  +++N+LI       R   V ++   M+     P++ T   LI 
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G++     +L  +  +   P ++   +L+      E + E   L  RM+++ +  
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y++++    K + ++ A+V+++E+  +        Y + I   C  G+I     L+
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM  +   P   T+N+LI+   K  RI E+L     MM + + P+   +N M+   C  
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N   A  +    +  G  P+ + Y+ LI GY K   + E + L+ EM +K++ P + +Y
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  LC  G++    +    M      P V  Y  L+    +     KA+ L  ++V 
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV- 572

Query: 367 EGLKPS--TSYLCSASTCRG 384
           EG+ P   T++    + C+G
Sbjct: 573 EGIWPDFYTNHAIVDNLCKG 592



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 168/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  +  A  +   L+ +G S S+ +F  LI+           + +   +L++   PN  T
Sbjct: 68  MGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVT 127

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             T+I+  C  G +   +D    +  +          +LI  + +  +I+  + LL+ M 
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           + ++  + + YS ++    K   +  AL +  ++ +RG   ++  Y + I   C  G+ +
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E   L+ +M    + P D TFN+LI+   K  RI E+      M  R   P    +N ++
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C   N  +A  +    + +G  P+ + Y+ LI GY K   + E + L+ E+  K++ 
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           PT+ +Y SLI  LC  G++    K    M   +  P V  Y  L+    ++G   +AL +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 361 CEEMVSEGLKPS 372
              M+ +G+KP+
Sbjct: 428 LVMMMKKGVKPN 439



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 171/402 (42%), Gaps = 35/402 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D C+ L  +G+     ++ TLI+ ++K+ +      + Q M ++   PN      LI 
Sbjct: 144 ALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID 203

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G +   + +  +I  +      +   SLI       R +E   LL +M+R+N+  
Sbjct: 204 GLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDP 263

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +++++ A  K   +  A  V   M KRG   +   Y   +  YC    + EA  L 
Sbjct: 264 DDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF 323

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   GL+P    +N+LI+G  K K ++E++   +++ ++ L+P+ +++N +I  LC  
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383

Query: 247 GNAK-----------------------------------QANGMLTLALDKGFSPNEITY 271
           G                                      +A G+L + + KG  PN +TY
Sbjct: 384 GRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + ++ GY     +     ++  M    + P +  Y  LI+  C+   ++EA   FK M+ 
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +L+P +  Y SL+      G       L +EM   G  P  
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/388 (23%), Positives = 155/388 (39%), Gaps = 69/388 (17%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG    ++++N LI    K+   D    +++ +      P  A+  +LI  LC  G++ 
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +LD +HG    P V+    LI  + +E RI E                        
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE------------------------ 423

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                      AL V   M+K+G   N   Y   +  YC    +  A  +   M  +GL+
Sbjct: 424 -----------ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N+LI G  K + ++E++   ++M  + L+P  +++N +I  LC  G       +
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE---------------------- 293
           L    D G SP+ ITY+ L+  + K     + + L+ +                      
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKG 592

Query: 294 ------------MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
                       +     SP +  YT LI++LC+ G   EA      M+ +   P    +
Sbjct: 593 EKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITF 652

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           E ++G+ L++    KA  L EEM++ GL
Sbjct: 653 EIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 133/328 (40%), Gaps = 35/328 (10%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           +  M+     P  +    L+ A+ + G   T + +  ++  K  SP +   T LI     
Sbjct: 43  FNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFH 102

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           +                   H   A+SL+                   +LK G+  N   
Sbjct: 103 QS------------------HTAFAFSLLA-----------------TILKSGYQPNLVT 127

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + T I  +C  G I +A    Q +   G      T+  LI G +K  +I+ +L   ++M 
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              + P+   ++ +I  LC+ G    A G+ +   ++G   + +TY+ LI G    G  Q
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           EV +L  +M  +++ P    +  LI +LC+ G++ EA     +M      P +  Y +L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +  + N  +A  L   MV  GL+P  
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDV 335



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 14/240 (5%)

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           + RN++ A+  +  M++      + V+   +GA    G    A  L  ++++ G+ P   
Sbjct: 32  RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           TF +LI           + S    ++     P+   FN +I   C        NGM+  A
Sbjct: 92  TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC-------INGMIFKA 144

Query: 260 LD-------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           LD       +G+  ++ TY  LI G +K G+I+  L L  EME  S+ P L  Y++LI  
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+ G + +A      +    ++     Y SL+      G   +   L  +MV E + P 
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 1/226 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            VA D+   + + G    ++++N LI+   K++  D    +++ M      P+ A+  +L
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G++    ++LD +     SP VI    L+    + +  ++ + L ++++ + +
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGI 575

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D      IV    K   L+ A    + +L  G S N   YT  I A C+ G   EA  
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           L+ +ME+    P   TF ++I    +    +++    E+M++R L+
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 172/361 (47%), Gaps = 35/361 (9%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S +  ++  LIH + +  R D  +++   M++   +P+ A    LI+ LCK G++    +
Sbjct: 89  SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARN 148

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +L  +  + C P VI  TSLI+   Q   ++E   L+++M    +  DT+AY+ ++    
Sbjct: 149 VLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLC 208

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   LE    + EEM++ G   ++F Y T +   CE GK EEA  ++++M      P   
Sbjct: 209 KQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVV 268

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-------------------------- 233
           T+N L++G  K  +++E+    E M+ R+  P+                           
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328

Query: 234 ---------SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                      +N ++  LC+ G  ++A+ +L + ++K  +P+ +TYS L+ G  K G++
Sbjct: 329 FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKV 388

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +   L   M  +   P L  + ++I   C+ GK++E  K  ++MK  S  P V  Y +L
Sbjct: 389 DDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL 448

Query: 345 V 345
           +
Sbjct: 449 I 449



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 173/384 (45%), Gaps = 39/384 (10%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++  LI   +++  + +V  I   ML     P+  T  T++ A C+ G L      L   
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDR---ALSHF 82

Query: 85  HGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
            GK  CSP       LI  + Q +RI+E   LL  M++K+   D   Y+ ++    KM  
Sbjct: 83  RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGK 142

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +++A  V + ML+R    +   YT+ I   C+   ++EA  LM++M+ +GL P    +N 
Sbjct: 143 IDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNA 202

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK- 262
           L+ G  K  ++EE     E+M+     P   ++N ++  LCE G  ++A  +L   ++K 
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262

Query: 263 -------------GF---------------------SPNEITYSHLIGGYAKEGEIQEVL 288
                        GF                     +P  ITY+ LIGG+++   + +  
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           ++  +M    ISP L  Y  L+  LC+ GKLEEA +  ++M      P V  Y  LV   
Sbjct: 323 RVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGL 382

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            + G    A  L E M+  G +P+
Sbjct: 383 CKLGKVDDARLLLEMMLERGCQPN 406



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 186/423 (43%), Gaps = 64/423 (15%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G      S+NT++  + +S + +   +I + M+E    P+  T  +L+   CK  ++ 
Sbjct: 225 EAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMD 284

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLI------------LRIIQE----------------- 106
               +L+ + G+RC+P VI  T+LI             R++++                 
Sbjct: 285 EAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344

Query: 107 ------ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
                  ++EE   LL+ M+ K+   D + YS++V    K+  ++ A ++ E ML+RG  
Sbjct: 345 DGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQ 404

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR------- 213
            N   + T I  +C+ GK++E + +++ M+     P   T++ LI+G  KA R       
Sbjct: 405 PNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI 464

Query: 214 ----------------------IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
                                 +EE+    + M  +   P+ S +  +I  LC+     +
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ML +  ++G  PN  TYS LI G  K   +++ + +   M  K   P +  YTSLI 
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+  K++ A + FK M+     P    Y  L+    + GN  KA+ + + M+ +G  P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644

Query: 372 STS 374
             +
Sbjct: 645 DAA 647



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 186/375 (49%), Gaps = 6/375 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   + A +V + + +R     +I++ +LI    +++  D   ++ + M E+   P+   
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L++ LCK  QL+    +L+ +      P      +++  + +  + EE   +L++M+
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    D + Y+ ++    K+  ++ A  + E+M+ R  +     YTT IG +    ++ 
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  +M++M  AG+ P   T+N L++G  KA ++EE+    E M+ +   P    ++ ++
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G    A  +L + L++G  PN +T++ +I G+ K G++ E  K+   M+  S +
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y++LI   C+  ++++A   F I+    + P    Y S++      G   +A  +
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDA---FAIL---GISPDKASYSSMLEGLCSTGKVEEAQEV 493

Query: 361 CEEMVSEGLKPSTSY 375
            + M  +G  P++S+
Sbjct: 494 MDLMTKQGCPPTSSH 508



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 6/339 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ V   + + G S  L+++N L+  + K+ + +    + + M+E    P+  T   L++
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G++     +L+ +  + C P ++   ++I    +  +++EG  +L+ M   +   
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTP 440

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS ++    K   ++ A  +       G S +   Y++ +   C  GK+EEA  +M
Sbjct: 441 DVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVM 494

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G  P    + L+I G    +R +E+L   + M  R   P+   ++ +I  LC+ 
Sbjct: 495 DLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKT 554

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              + A  +L + L+KG  P+  TY+ LI G+ K  ++    + +  M      P   AY
Sbjct: 555 KRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAY 614

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             LIS  CQ G +E+A +  ++M      P    Y SL+
Sbjct: 615 NILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 148/310 (47%), Gaps = 6/310 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A ++   + ++  +  +++++ L++ + K  + D    + + MLE    PN  T  T
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   CK G++     +L+ +    C+P V+  ++LI    +  R+++   +L       
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------G 466

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D  +YS ++        +E A  V + M K+G    S  Y   IG  C+  + +EA 
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEAL 526

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++Q M   G +P   T+++LI G  K KR+E++++  + M+ +  +P  + +  +I   
Sbjct: 527 KMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGF 586

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+      A        D G  P+++ Y+ LI G+ + G +++ +++   M  K  +P  
Sbjct: 587 CKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDA 646

Query: 304 PAYTSLISSL 313
             Y SL+ SL
Sbjct: 647 ATYFSLMRSL 656



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 98/243 (40%), Gaps = 37/243 (15%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y  ++    +  N +  L +  EML R FS +   + T + AYC+ G ++ A  L     
Sbjct: 27  YGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA--LSHFRG 84

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
                P   T+ +LI G  + +RI+E+                   +EMI++ C      
Sbjct: 85  KMWCSPTAFTYCILIHGLCQCQRIDEAYQL---------------LDEMIQKDCH----- 124

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
                          P+   Y+ LI G  K G+I     +   M  +S  P +  YTSLI
Sbjct: 125 ---------------PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLI 169

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              CQ   L+EA K  + MK   L P    Y +L+    ++    +   L EEMV  G +
Sbjct: 170 VGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGRE 229

Query: 371 PST 373
           P T
Sbjct: 230 PDT 232


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 175/359 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG   ++ ++  LI  +++  + ++   +Y  ML+    PN  T   LI+ LC GG+
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
             T + +   + G            +I  +     IE+ MVL ++ML+   +   + Y+ 
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   +   N+ +A  + + M + G   + + Y   +  + ++GK+E A+   QEM   G
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   ++  LI+G +K  +++ +LS  ++M      P+  ++N +I  L +     +A 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAE 568

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    +++G  PN ITY+ LI G  + G  Q   K++++ME +   P L  Y+SLI  L
Sbjct: 569 KICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGL 628

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           CQ GK +EA+   K M+   L P    + SL+   +  G    A  L   MV  G KP+
Sbjct: 629 CQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPN 687



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 191/407 (46%), Gaps = 37/407 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKS-------------------------- 36
           + E A ++ + +   G   SL++FNTLI++++K                           
Sbjct: 178 MVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYT 237

Query: 37  --------DRN-DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
                   +RN DL + ++  M++    PN  T  TLI+ LC  G++   +DML+ +  K
Sbjct: 238 SLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 297

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
              P V   T  I  +   E  EE + L+ RM ++    +   Y+ ++    ++  LE A
Sbjct: 298 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 357

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           + +Y +MLK G   N+  Y   I   C  G+   A  +   ME  G     +T+N +I+G
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                 IE+++   E+M+    LP+   +N +I      GN   A  +L L  + G  P+
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           E TY+ L+ G++K G+++     + EM    ++P   +YT+LI    + GK++ A    K
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGLKPST 373
            M+     P V+ Y +++   L K N+ ++A  +C++MV +GL P+ 
Sbjct: 538 RMEEMGCNPNVESYNAVIN-GLSKENRFSEAEKICDKMVEQGLLPNV 583



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 174/400 (43%), Gaps = 35/400 (8%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D    +   GF  SL S NTL+  + K +  +    +Y+ ML +   P+  T  TLI+ L
Sbjct: 149 DFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINIL 208

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
            K G+++    +L +I     SP V   TSLIL   +   ++    +  RM+++    ++
Sbjct: 209 SKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNS 268

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + YS ++        ++ AL + EEM+++G     + YT  I A C     EEA  L+  
Sbjct: 269 VTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR 328

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP----------------- 231
           M+  G +P  +T+  LI G ++  ++E ++    +M+   L+P                 
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 232 ------------------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
                             +   +NE+I+ LC  G+ ++A  +    L  G  P  +TY+ 
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI GY  +G +    +L   M+     P    Y  L+S   + GKLE A  YF+ M    
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L P    Y +L+  H + G    AL L + M   G  P+ 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNV 548



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 154/342 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            EVA  +   + + G   + +++N LI+ +    R     +I+  M  +    N  T   
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC GG ++  + + +++      P V+   +LI   + +  +     LL  M    
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D   Y+ +V    K   LESA   ++EM++ G + N   YT  I  + + GK++ A 
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ ME  G  P  E++N +I G +K  R  E+   C++M+ + LLP+   +  +I  L
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G  + A  +      +   PN  TYS LI G  +EG+  E   L  EME K ++P  
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 653

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +TSLI      G+++ A    + M      P    Y  L+
Sbjct: 654 VTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLL 695



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 168/363 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  ++AF V   + + G   + ++++TLI+ +    R D    + + M+E    P   T 
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              I+ALC     +  ++++ R+  + C P V   T+LI  + +  ++E  + L  +ML+
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++ +T+ Y+ ++          +AL ++  M   G  AN+  Y   I   C  G IE+
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L ++M   G  P   T+N LI G      +  +    + M      P    +NE++ 
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              + G  + A+      ++ G +PN ++Y+ LI G++K+G++   L L   ME    +P
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            + +Y ++I+ L +  +  EA+K    M    L+P V  Y +L+      G    A  + 
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606

Query: 362 EEM 364
            +M
Sbjct: 607 HDM 609



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 147/314 (46%), Gaps = 1/314 (0%)

Query: 61  IRTLISALCKGGQ-LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           IR L+   C+  + ++   D L+ I G      +    +L++++ + E +E    L K+M
Sbjct: 130 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 189

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L   +    + ++ ++    K   +  A ++  ++ +   S + F YT+ I  +C    +
Sbjct: 190 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           + A  +   M   G  P   T++ LI G     R++E+L   E+M+ + + P+   +   
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC   + ++A  ++     +G  PN  TY+ LI G ++ G+++  + LY++M  + +
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y +LI+ LC  G+   A K F  M+ H  +     Y  ++      G+  KA+ 
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 360 LCEEMVSEGLKPST 373
           L E+M+  G  P+ 
Sbjct: 430 LFEKMLKMGPLPTV 443


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 180/394 (45%), Gaps = 37/394 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  + L+++  L+  + K  + D V    +  L +   PN  T   LI ALCK   + 
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLI 134
               +L  +  K  SP V+  +S+I   ++   +++     KRM+++  I+ + + Y  +
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEYKRMMKERGINPNVVTYGTL 455

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K +  ++AL VY +ML  G   N F+  + +    + GKIEEA  L ++   +GL
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                 +  LI+G  KA  +  +  + +++M R +LP    +N  I  LC  G  K+A  
Sbjct: 516 SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKS 575

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
            LT   + G  P++ TY+ +I  + ++GE  + LKL +EM+  SI P L  Y +L++ L 
Sbjct: 576 FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF 635

Query: 315 QCGKLEEADKYFKIMKSHSLVPG--------------------VDIYESLV--GIHLE-- 350
             G +E+A      M S    P                     +DI+E ++  G+H +  
Sbjct: 636 GTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 351 -----------KGNKAKALHLCEEMVSEGLKPST 373
                       G   KA  + EEM+  G+ P T
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 3/332 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+++T  T+I + C+ G+    + +L  +      P +I   +L+  +     +E+   L
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M+       ++ +  ++ A  + R L+  L ++E M+  G  A+  VY T +   C 
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +G   +A  +++EM  +G+ P   TFN LI G  K+  ++ + +   QM+ + + P+ + 
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN ++  L   G   +A  +L      G  PN +TY  L  G+ K+    E ++LY EM 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K   P +  Y +LIS   + G + +A + FK M+   + P    Y+ LV       N  
Sbjct: 827 GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGT 886

Query: 356 KALHLCEEMVSEGLKPST---SYLCSASTCRG 384
           +     ++M  +G  PS    S++C A +  G
Sbjct: 887 EVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 184/408 (45%), Gaps = 37/408 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATI 61
           L + A +  R +++RG + +++++ TLI    K    D    +Y  ML E ++  N+  +
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV-NKFIV 487

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L++ L + G+++  + +     G   S   +  T+LI  + +   +       + ++ 
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 122 KNMIHDTIAYSLIV-----YAKVK--------MRNL----------------------ES 146
           +NM+ D + Y++ +       K K        MRN+                        
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +  EM       N   Y T +      G +E+A  L+ EM +AG  P   T   +++
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
            C++++R++  L   E MM+  L    + +N +++ LC  G  ++A  +L   L  G +P
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + IT++ LI G+ K   +      Y +M +++ISP +  + +L+  L   G++ EA    
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             M+   L P    Y+ L   H ++ NK +A+ L  EMV +G  P  S
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 167/360 (46%), Gaps = 11/360 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQ-----HMLENIRYPNEATIRTLISALCK 70
           +RG     ++ NTL+  + ++ + D    +       H L+ I +       TLI+  C+
Sbjct: 128 KRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGW------NTLIAGYCR 181

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G     + + DR+  +     V+   +L+    +  +++    +L  M    +  +   
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+  +    + + +E A  +YE M++ G   +    +  +   C  G+  EA  L +EM+
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P   T+  LI+  AKA R +E LS   +M+SR ++     +  ++  L + G   
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +    L  AL    SPN +TY+ LI    K   + E  ++  EME KSISP +  ++S+I
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +   + G L++A +Y ++MK   + P V  Y +L+    +   +  AL +  +M+ EG+K
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 175/368 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AFD+   + + G  L +++ + L+  + +  R    + +++ M +    PN  T  TL
Sbjct: 256 EEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTL 315

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +L K G+ +  + +L  +  +     ++  T+L+  + ++ + +E    L+  L  N+
Sbjct: 316 IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL 375

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y++++ A  K  N++ A  V  EM ++  S N   +++ I  + + G +++A  
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             + M+  G+ P   T+  LI+G  K +  + +L     M+   +  +    + ++  L 
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLR 495

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +   A   G S + + Y+ LI G  K G++    K   E+  +++ P   
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y   I+ LC  GK +EA  +   M++  L P    Y +++  H  KG  AKAL L  EM
Sbjct: 556 VYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 365 VSEGLKPS 372
               +KP+
Sbjct: 616 KMSSIKPN 623



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 8/365 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK-GG 72
           +E++  S ++++F+++I+   K    D      + M E    PN  T  TLI    K  G
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 73  Q---LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           Q   L+ Y DML    G + +  ++   SL+  + Q  +IEE M L K      +  D +
Sbjct: 465 QDAALEVYHDML--CEGVKVNKFIV--DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++    K  ++ +A    +E++ R    ++ VY  FI   C  GK +EA   + EM
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            N GLKP   T+N +I    +     ++L    +M    + P+   +N ++  L   G  
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +L   +  GFSP+ +T+  ++   ++   +  +L ++  M    +   +  Y +L
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC  G   +A    + M    + P    + +L+  H +  +   A     +M+ + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 370 KPSTS 374
            P+ +
Sbjct: 761 SPNIA 765



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 143/307 (46%), Gaps = 2/307 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +LI++NTL+  +  +   +    +   M+     P+  T R ++ A  +  +L   +D+ 
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +        + V  +L+  +       +  V+L+ ML   +  DTI ++ ++    K 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L++A   Y +ML +  S N   + T +G     G+I EA  ++ EME +GL+P + T+
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 202 NLLIEGCAK-AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++L  G  K + ++E    YCE M+ +  +P  S +N +I    + G   QA  +     
Sbjct: 803 DILATGHGKQSNKVEAMRLYCE-MVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQ 861

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G  P   TY  L+ G+++     EV K   +M+ K  SP+    + +  +  + G   
Sbjct: 862 KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 321 EADKYFK 327
           +A +  K
Sbjct: 922 QAQRLLK 928



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 154/364 (42%), Gaps = 3/364 (0%)

Query: 9   DVCRYLEQRG---FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D    L  RG    +L +I +NTLI    +         +   M       +     TL+
Sbjct: 152 DAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           +  C+ GQ+     +LD +      P V   T  I+   + + +EE   L + M+R  ++
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D +  S +V    +      A  ++ EM K G + N   Y T I +  + G+ +E   L
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM + G+     T+  L++   K  + +E        +S  L P+   +  +I  LC+
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             N  +A  +L    +K  SPN +T+S +I G+ K G + +  +    M+ + I+P +  
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI    +    + A + +  M    +     I +SLV    + G   +A+ L ++  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 366 SEGL 369
             GL
Sbjct: 512 GSGL 515



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 130/321 (40%), Gaps = 40/321 (12%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T+ TL++ LC+ GQ+     + DR  G                                 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGG--------------------------------- 163

Query: 120 LRKNMIH--DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
                IH  D I ++ ++    ++ +  +AL V + M  +G   +   Y T +  +C  G
Sbjct: 164 -----IHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG 218

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +++ A  ++  M+ AG+ P   T+   I    + K +EE+    E M+   +L      +
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  LC  G   +A  +       G +PN +TY  LI   AK G  +E+L L  EM  +
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            +   L  YT+L+  L + GK +E     +   S +L P    Y  L+    +  N  +A
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398

Query: 358 LHLCEEMVSEGLKPSTSYLCS 378
             +  EM  + + P+     S
Sbjct: 399 EQVLLEMEEKSISPNVVTFSS 419



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 8/259 (3%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  +V  D+  ++   G    +  +NTL+ V+           + + ML +   P+  T 
Sbjct: 673 RRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITF 732

Query: 62  RTLISALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             LI   CK   L     TY  ML     +  SP +    +L+  +    RI E   +L 
Sbjct: 733 NALILGHCKSSHLDNAFATYAQMLH----QNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M +  +  + + Y ++     K  N   A+ +Y EM+ +GF      Y   I  + + G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            + +A  L ++M+  G+ P   T+++L+ G ++ +   E     + M  +   PS    +
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 238 EMIRRLCECGNAKQANGML 256
            + R   + G   QA  +L
Sbjct: 909 FICRAFSKPGMTWQAQRLL 927



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 11/253 (4%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  + + ++Y+  ++R L  A+      L R     +  Y   + A  ++     A  ++
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIA-----LLRSSRPTTVAYNILLAALSDHA---HAPAVL 123

Query: 187 QEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM   G+ P+D  T N L+ G  +  +++ + +  ++      L     +N +I   C 
Sbjct: 124 AEMCKRGV-PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCR 181

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+   A  +      +G   + + Y+ L+ G+ + G++     +   M+   + P +  
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT  I   C+   +EEA   ++ M  + ++  V    +LV      G  ++A  L  EM 
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 366 SEGLKPSTSYLCS 378
             G  P+    C+
Sbjct: 302 KVGAAPNHVTYCT 314


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 179/365 (49%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  + R ++ +    +++ ++T+I  + K    +  + +Y  M+     P+  T  +L
Sbjct: 180 KAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSL 239

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS  C  G+L+  VD+ +R+     +P V   + LI    +E ++ E   +L  M++KN+
Sbjct: 240 ISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNV 299

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ ++     ++ +  A  ++  M +RG + + + Y+  I  +C+   ++EA  
Sbjct: 300 KLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMK 359

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM    + P   T+N L++G  K+ R   +L   ++M  R    +   +N ++  +C
Sbjct: 360 LFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAIC 419

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  +  +A  +LT   +KG  P+  TY+ LI G  K G + +  K++ ++  K  SP + 
Sbjct: 420 KNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIY 479

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YTSLI+  C  G  +E       MK +  +P    YE L+    EK    KA  L  EM
Sbjct: 480 TYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539

Query: 365 VSEGL 369
           ++ GL
Sbjct: 540 IARGL 544



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 169/357 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF L  +S+ TLI+ + +        ++ + +   +  PN     T+I ++CK   +  
Sbjct: 157 QGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVND 216

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+   +  KR SP V+  +SLI       +++  + L  RM+  N+  +   +S+++ 
Sbjct: 217 AFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +  A  V   M+K+    +   Y + +  YC   ++ +A  L   M   G+ P
Sbjct: 277 GFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTP 336

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              +++++I G  K K ++E++   E+M  +++ P+   +N ++  LC+ G    A  ++
Sbjct: 337 DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELV 396

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               D+G   N ITY+ ++    K   + + + L  +++ K I P +  YT LI+ LC+ 
Sbjct: 397 DEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKV 456

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G+L++A K F+ +      P +  Y SL+     KG   + L +  +M   G  P+ 
Sbjct: 457 GRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNA 513



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 162/350 (46%), Gaps = 1/350 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I F  ++  + K+ +      + Q M  N   P+  T   L++   + G ++    +  +
Sbjct: 59  IEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAK 118

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           I  K   P  +  T LI  +  +  + + +    +++ +    D ++Y  ++    ++  
Sbjct: 119 ILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGE 178

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            ++A+ +   +  +    N  +Y+T I + C+   + +A  L  EM +  + P   T++ 
Sbjct: 179 TKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSS 238

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G     +++ ++    +M+S  + P+   F+ +I   C+ G  ++A  +L + + K 
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              + +TY+ L+ GY    ++ +   L+  M  + ++P + +Y+ +I+  C+   ++EA 
Sbjct: 299 VKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAM 358

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K F+ M    + P V  Y SLV    + G  + AL L +EM   G +PS 
Sbjct: 359 KLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG-QPSN 407



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 1/257 (0%)

Query: 115 LLKRMLRKN-MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           L  R+L KN  I   I +  I+ + +K +  ++AL + ++M   G   +       +  +
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
            + G I+ +  +  ++   G  P   TF +LI+G      + ++L + ++++++      
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
            ++  +I  LC  G  K A  +L     K   PN + YS +I    K+  + +   LY E
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M  K ISP +  Y+SLIS  C  GKL+ A   F  M S ++ P V  +  L+    ++G 
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 354 KAKALHLCEEMVSEGLK 370
             +A ++   M+ + +K
Sbjct: 284 VREAKNVLAVMMKKNVK 300



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/292 (20%), Positives = 138/292 (47%), Gaps = 4/292 (1%)

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +H     P  I    ++  +++ ++ +  + L ++M    +  D I  +L++    ++ +
Sbjct: 49  LHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGH 108

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ +  V+ ++LK+G+  ++  +T  I   C  G++ +A     ++   G +    ++  
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  +    + ++    ++  + + P+   ++ +I  +C+      A  +    + K 
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+ +TYS LI G+   G+++  + L+  M   +I+P +  ++ LI   C+ GK+ EA 
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIH--LEKGNKAKALHLCEEMVSEGLKPST 373
               +M   ++   V  Y SL+  +  +++ NKAK+L     M   G+ P  
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF--NVMAQRGVTPDV 338


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 174/348 (50%), Gaps = 1/348 (0%)

Query: 26  FNTLI-HVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           FNT++  ++ ++ R + V  I   M+     PN+  +   +  LCKGG+ Q  V +  + 
Sbjct: 399 FNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 458

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K     +  + +LI  + + + ++E   +++ ML K +  D+I Y++++    K   +
Sbjct: 459 LNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 518

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A+ ++ +M +RGF  + F + T + AYC  GK+EE   L+ +M+  GL+P   ++  +
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 578

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  KAK I ++  Y  ++M R L P+   +N +I      G+   A   +      G 
Sbjct: 579 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 638

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  +TY  L+      G ++E   ++ +    ++   +  YT +I   C+ GK+ EA  
Sbjct: 639 QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVA 698

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           YF+ M+S  + P    Y +L+  + + GN  +A  L +EMV  G+ P 
Sbjct: 699 YFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPD 746



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 176/438 (40%), Gaps = 72/438 (16%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLI 65
           A D  R L  RG   S+ + N  +  + ++ + D    ++  M E+     NE +   +I
Sbjct: 169 AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            ALCK G++    +ML  +      P V+    L+  + +  R+EE   L  RM +  M 
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + + +++    +        +V +EM + G S N  +Y   IG +C  G   +A  L
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348

Query: 186 MQEMENAGLKPYDETFNLLIEGCAK----------------------------------- 210
             EM    +KP   T+NL+ +   K                                   
Sbjct: 349 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 408

Query: 211 -AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN-- 267
             +R+E  +S   +M++R + P+       +R LC+ G  ++A G+    L+KG   N  
Sbjct: 409 RTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLA 468

Query: 268 ---------------------------------EITYSHLIGGYAKEGEIQEVLKLYYEM 294
                                             ITY+ +I G  K+ +++E +KL+ +M
Sbjct: 469 TSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDM 528

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             +   P L  + +L+ + C  GK+EE       MK+  L P +  Y +++  H +  + 
Sbjct: 529 TRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDI 588

Query: 355 AKALHLCEEMVSEGLKPS 372
            KA     E++  GLKP+
Sbjct: 589 RKAKEYLTELMDRGLKPN 606



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 176/407 (43%), Gaps = 37/407 (9%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  EV   V + +EQ G S + + +N LI    +        R++  M+     P   T 
Sbjct: 306 RFGEVGI-VLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTY 364

Query: 62  RTLISALCKGGQLQ----TYVDMLD---RIH--------------GKRCSPMVIVNTSLI 100
             +  ALCK G+++       DML     +H               +R   +V +   ++
Sbjct: 365 NLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMV 424

Query: 101 LRIIQEE---------------RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            R ++                 + +E + +  + L K +  +    + +++   + + ++
Sbjct: 425 TRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMK 484

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  V + ML +G   +S  Y   I   C+  K+EEA  L  +M   G KP   TFN L+
Sbjct: 485 EATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLL 544

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
                  ++EE+    +QM +  L P   ++  +I   C+  + ++A   LT  +D+G  
Sbjct: 545 HAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLK 604

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN   Y+ LIGGY + G+I   +     M+   I PT   Y SL+  +C  G +EEA   
Sbjct: 605 PNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTI 664

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           F   + +++  GV  Y  ++  + + G   +A+   EEM S G+ P+
Sbjct: 665 FSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 711



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 38/318 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V + +  +G  L  I++N +I    K  + +   +++  M      P+  T  TL+ 
Sbjct: 486 ATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLH 545

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C  G+++    +LD++  +   P                                   
Sbjct: 546 AYCNLGKMEETFHLLDQMKTEGLQP----------------------------------- 570

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y  I+    K +++  A     E++ RG   N F+Y   IG Y   G I  A   +
Sbjct: 571 DIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAV 630

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M++ G++P + T+  L+     A  +EE+ +   Q     +      +  MI+  C+ 
Sbjct: 631 ETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKL 690

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A         +G SPN++TY+ L+  Y+K G  +E  KL+ EM    + P    Y
Sbjct: 691 GKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITY 750

Query: 307 TSLISSLCQCGKLEEADK 324
            +LI+   +C ++   DK
Sbjct: 751 GTLIA---RCSEVNSLDK 765



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
           ++ F+  TFI +  + G +  A    + + + G  P  +T N  +E   +A +++ +   
Sbjct: 149 SSDFLIHTFITSPAQ-GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREV 207

Query: 221 CEQMM-SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
            ++M  SR +  +  ++  MI+ LC+ G       ML      G  P  +TY+ L+    
Sbjct: 208 FDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALC 267

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K G ++E  +L   ME   ++P++  +  LI+ L +  +  E     + M+   + P   
Sbjct: 268 KSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEV 327

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS--TSYLCSASTCR 383
           IY  L+G H  KG+ ++AL L +EMV + +KP+  T  L + + C+
Sbjct: 328 IYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK 373



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 100/234 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F +   ++  G    ++S+ T+I    K+            +++    PN      
Sbjct: 553 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 612

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    + G +   +D ++ +      P  +   SL+  +     +EE   +  +    N
Sbjct: 613 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 672

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    I Y++++    K+  +  A+  +EEM  RG S N   YTT + AY + G  EEA+
Sbjct: 673 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 732

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            L  EM  +G+ P + T+  LI  C++   +++ + +  ++ S  L      +N
Sbjct: 733 KLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYN 786


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 178/381 (46%), Gaps = 5/381 (1%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y++Q    GF    +++NT +H + ++       ++   ML+    P+  T  T+I
Sbjct: 285 DALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 344

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + L K G+L     +++++  + C P      +LI+ +  + R+EE + L + +  K + 
Sbjct: 345 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLS 404

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   +++++ A  K+ +    + ++EEM   G + +   Y   I   C  GK+  A  L
Sbjct: 405 PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDL 464

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EME+ G      T+N +I+   K  RIEE+    +QM ++ +  S   FN +I  LC+
Sbjct: 465 LNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCK 524

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A  ++   + +G  PN ITY+ ++  Y K+G I++   +   M        +  
Sbjct: 525 AKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVT 584

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI+ LC+ G+ + A K  + M+   + P    Y  ++     + N   AL+L  EM 
Sbjct: 585 YGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMT 644

Query: 366 SEGLKPS--TSYLCSASTCRG 384
             G  P   T  +   S CRG
Sbjct: 645 EVGEPPDALTYKIVFRSLCRG 665



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 168/369 (45%), Gaps = 1/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q G    + ++NT+I+ ++K+   D    I   M++    P+  T  TLI 
Sbjct: 321 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 380

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL    +L+  +D+   +  K  SP V     LI  + +      G+ L + M       
Sbjct: 381 ALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y++++     M  L +AL +  EM   G   ++  Y T I A C+  +IEEA  + 
Sbjct: 441 DEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVF 500

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  G+     TFN LI+G  KAKRI+++    EQM+   L P+   +N ++   C+ 
Sbjct: 501 DQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQ 560

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN K+A  +L      GF  + +TY  LI G  K G  Q  LKL   M  K I PT  AY
Sbjct: 561 GNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 620

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK-ALHLCEEMV 365
             +I SL +   L +A   F+ M      P    Y+ +       G   K A     EMV
Sbjct: 621 NPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMV 680

Query: 366 SEGLKPSTS 374
           ++G  P  S
Sbjct: 681 NKGFMPEFS 689



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 183/410 (44%), Gaps = 38/410 (9%)

Query: 1   MRLFEVAFD-VCRYLEQRGFSL--SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPN 57
           +R F+ A D V   L+   F +    + FN L++V+ +  +  L+  +Y  M      P+
Sbjct: 137 LRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPD 196

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRI--HG----------------------------- 86
             T+ TLI ALC+  Q++T V ML+ +  HG                             
Sbjct: 197 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKA 256

Query: 87  ----KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
                 CSP  +    LI    +  R+E+ +  +++ +      D + Y+  V+   +  
Sbjct: 257 KMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNG 316

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           ++  AL V + ML+ G   + F Y T I    + G+++EA  ++ +M + G  P   TFN
Sbjct: 317 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 376

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            LI   +   R+EE+L    ++  + L P    FN +I  LC+ G+      +       
Sbjct: 377 TLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 436

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G +P+E+TY+ LI      G++   L L  EME      +   Y ++I +LC+  ++EEA
Sbjct: 437 GCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEA 496

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++ F  M +  +      + +L+    +      A  L E+MV EGL+P+
Sbjct: 497 EEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPN 546



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 1/315 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ R L  +G S  + +FN LI+ + K     L  R+++ M  +   P+E T   
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D+L+ +    C    +   ++I  + ++ RIEE   +  +M  + 
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + ++ ++    K + ++ A  + E+M+K G   N+  Y + +  YC+ G I++A 
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAA 567

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++ M   G +    T+  LI G  KA R + +L     M  + + P+  A+N +I+ L
Sbjct: 568 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
               N + A  +     + G  P+ +TY  +     +  G I+E      EM  K   P 
Sbjct: 628 FRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPE 687

Query: 303 LPAYTSLISSLCQCG 317
             ++  L   L   G
Sbjct: 688 FSSFRMLAEGLLNLG 702



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 157/357 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   G +    +F TL+    +    +   R+   M+E    P   T+  LI+  CK G+
Sbjct: 223 MSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGR 282

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +  + +       P  +   + +  + Q   +   + ++  ML++    D   Y+ 
Sbjct: 283 VEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNT 342

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L+ A  +  +M+ RG   ++  + T I A     ++EEA  L +E+   G
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   TFN+LI    K       +   E+M S    P    +N +I  LC  G    A 
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L      G   + +TY+ +I    K+  I+E  +++ +M+ + IS +   + +LI  L
Sbjct: 463 DLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGL 522

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C+  ++++A +  + M    L P    Y S++  + ++GN  KA  + E M + G +
Sbjct: 523 CKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 3/263 (1%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR---GFSANSFVYTTFIG 171
           L++ M R+      +     V +  ++R  + A+ +    L     G  A++ V+   + 
Sbjct: 111 LVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLN 170

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
              E  K++    +  EM   G++P   T N LI+   +A ++  ++   E+M S  + P
Sbjct: 171 VLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAP 230

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
             + F  +++   E G+ + A  +    ++ G SP  +T + LI GY K G +++ L   
Sbjct: 231 DETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYI 290

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +       P    Y + +  LCQ G +  A K   +M      P V  Y +++    + 
Sbjct: 291 QQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 350

Query: 352 GNKAKALHLCEEMVSEGLKPSTS 374
           G   +A  +  +MV  G  P T+
Sbjct: 351 GELDEAKGIVNQMVDRGCLPDTT 373


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 180/362 (49%), Gaps = 4/362 (1%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRND--LVWRIYQHMLENIRYPNEATIRTLISALCK 70
           Y+  RG+  ++ +   +++ + K  +    +VW   + M+E    P   +   +I +LCK
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWM--KKMVELDCEPEVVSYSIIIDSLCK 256

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
              +   VD+   +     SP V+   SLI  +    + ++  +L K ML  NM  D + 
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +S++V A  K   +  AL V+ +M++     +   Y++ I   C+    +E++ L+ EM 
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           +  ++P   TF++ ++   K   + E+ S    M+ R L P+   +N ++   C      
Sbjct: 377 SRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMD 436

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +  + ++KG +P+ ++Y+ LI GY K   I E  +L+ EM +K ++P    +T+LI
Sbjct: 437 EARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLI 496

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S LCQ G+   A + FK M SH   P +  Y +L+    + G+  +AL L E +    LK
Sbjct: 497 SGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLK 556

Query: 371 PS 372
           P+
Sbjct: 557 PN 558



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 163/337 (48%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A D+  ++   G S +++++N+LI+ +  S +      +++ MLE    P+  T 
Sbjct: 258 RLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTF 317

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+ ALCK G +   + +  ++      P ++  +SLI  + +    +E   LL  ML 
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS 377

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +N+  D + +S+ V    K   +  A  +   M++RG   N   Y + +  YC + +++E
Sbjct: 378 RNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDE 437

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   M N G  P   ++N+LI+G  K++RI+E+    ++M  + L P+      +I 
Sbjct: 438 ARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLIS 497

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G    A  +       G  P+ ITYS L+ G+ K G + E L L+  ++   + P
Sbjct: 498 GLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKP 557

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
                  L+  +C+ GKLE+A + F  +    L P V
Sbjct: 558 NHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/328 (20%), Positives = 146/328 (44%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           +  M+    +P       L++AL +     + V +  ++     S  V   T LI  +  
Sbjct: 92  FNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCH 151

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
              +  G  +L ++ +       I ++ ++        +  A+   + ++ RG+    + 
Sbjct: 152 LHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYT 211

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           +T  +   C+ GK   A   M++M     +P   +++++I+   K + + E++     M 
Sbjct: 212 HTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMR 271

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           S  + P+   +N +I  +C  G  KQA+ +    L+    P+ +T+S L+    KEG + 
Sbjct: 272 SIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVL 331

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E L ++ +M   ++ P +  Y+SLI  +C+    +E+      M S ++ P V  +   V
Sbjct: 332 EALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWV 391

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  +KG  ++A  +   M+  GL+P+ 
Sbjct: 392 DVFCKKGMVSEAQSIINLMIERGLRPNV 419



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 121/263 (46%)

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           ++ +    +M+  N       ++ ++ A V+M++ +S + +Y +M   G S + +  T  
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I   C    +     ++ ++   G KP   TFN LI G     RI E++   + +MSR  
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P+      ++  LC+ G    A   +   ++    P  ++YS +I    K   + E + 
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L+Y M    ISPT+  Y SLI  +C  G+ ++A   FK M   ++ P V  +  LV    
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           ++G   +AL +  +M+   ++P 
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPD 348


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 183/364 (50%), Gaps = 6/364 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q GF     +FNTL++ + K+        I   ML+    P+  T  ++IS LCK G+++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V+ LD++  + CSP  +   +LI  + +E ++EE   L + +  K ++ D   ++ ++
Sbjct: 348 EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                 RN   A+ ++EEM  +G   + F Y   I + C  GK++EA  ++++ME +G  
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               T+N LI+G  KA +I E+    ++M    +  +   +N +I  LC+    + A+ +
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQL 527

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   + +G  P++ TY+ L+  + + G+I++   +   M      P +  Y +LIS LC+
Sbjct: 528 MDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 316 CGKLEEADKYFKI--MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV--SEGLKP 371
            G++E A K  +   MK  +L P    Y  ++     K    +A++L  EM+  +E    
Sbjct: 588 AGRVEVASKLLRSIQMKGIALTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAAPD 645

Query: 372 STSY 375
           + SY
Sbjct: 646 AVSY 649



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 169/370 (45%), Gaps = 3/370 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    + +FN LI  + ++ +      + + M      P+E T  T++    + G L   
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-MIHDTIAYSLIVY 136
           + + +++    CS   +    ++    +E R+E+ +  ++ M  ++    D   ++ +V 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K  +++ A+ + + ML+ G+  + + Y + I   C+ G+++EA   + +M      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI    K  ++EE+      + S+ +LP    FN +I+ LC   N + A  + 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                KG  P+E TY+ LI     +G++ E L +  +ME    + ++  Y +LI   C+ 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            K+ EA++ F  M+ H +      Y +L+    +      A  L ++M+ EG KP     
Sbjct: 484 NKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTY 543

Query: 377 CSAST--CRG 384
            S  T  CRG
Sbjct: 544 NSLLTHFCRG 553



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 157/356 (44%), Gaps = 36/356 (10%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATIRTLISALCKGGQLQT 76
           G S S +S N ++H   K  R +      Q M  ++  +P++ T  TL++ LCK G ++ 
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            ++++D                                    ML++    D   Y+ ++ 
Sbjct: 314 AIEIMDV-----------------------------------MLQEGYDPDVYTYNSVIS 338

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K+  ++ A+   ++M+ R  S N+  Y T I   C+  ++EEA  L + + + G+ P
Sbjct: 339 GLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP 398

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TFN LI+G    +    ++   E+M S+   P    +N +I  LC  G   +A  ML
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                 G + + ITY+ LI G+ K  +I+E  +++ EME   +S     Y +LI  LC+ 
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++E+A +    M      P    Y SL+      G+  KA  + + M S G +P 
Sbjct: 519 RRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 143/307 (46%), Gaps = 5/307 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ R L  +G    + +FN+LI  +  +  + +   +++ M      P+E T   L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +LC  G+L   ++ML ++    C+  VI   +LI    +  +I E   +   M    +
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGV 501

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +++ Y+ ++    K R +E A  + ++M+  G   + F Y + +  +C  G I++A  
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAAD 561

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++Q M + G +P   T+  LI G  KA R+E +      +  + +  +  A+N +I+ L 
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLF 621

Query: 245 ECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
                 +A  +    L++   +P+ ++Y  +  G     G I+E +    E+  K     
Sbjct: 622 RKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF--- 678

Query: 303 LPAYTSL 309
           +P ++SL
Sbjct: 679 VPEFSSL 685



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 131/287 (45%), Gaps = 4/287 (1%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV--YAKVKMRNLESA 147
           SP   +   ++LR+ +    ++   +L+ M        T  + +++  YA+ ++++ E  
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQD-EIL 138

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
            VV+  +   G   ++  Y   +    +   ++       +M   G+KP   TFN+LI+ 
Sbjct: 139 GVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKA 198

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             +A ++  ++   E M S  L+P    F  +++   E G+   A  +    ++ G S +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWS 258

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYF 326
            ++ + ++ G+ KEG +++ L    EM  +    P    + +L++ LC+ G ++ A +  
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +M      P V  Y S++    + G   +A+   ++M++    P+T
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT 365



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 37/254 (14%)

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           K  FS    +Y   +      G  ++   ++++M+N+G +     F +LIE  A+ +  +
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQD 135

Query: 216 ESLSYCEQMMSR-----------------------KLL-------------PSCSAFNEM 239
           E L     M+                         KL+             P  S FN +
Sbjct: 136 EILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVL 195

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I+ LC     + A  ML      G  P+E T++ ++ GY +EG++   L++  +M     
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGC 255

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS-LVPGVDIYESLVGIHLEKGNKAKAL 358
           S +  +   ++   C+ G++E+A  + + M +     P    + +LV    + G+   A+
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315

Query: 359 HLCEEMVSEGLKPS 372
            + + M+ EG  P 
Sbjct: 316 EIMDVMLQEGYDPD 329


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 177/366 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +++ G S  +  +N +I  + K  R     +++  ML+    PN  T  TLI 
Sbjct: 201 AIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLID 260

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK GQL+   ++ +R+  +   P +I   SL+  + + + +EE   +L+ M     + 
Sbjct: 261 GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVP 320

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ +    +K  N+++++ + EE +++G     +  +  + A C+ G +E+A  ++
Sbjct: 321 DRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVL 380

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++    GL P    FN ++ G  +   I ++ +  E+M +  L P+   +N ++++ CE 
Sbjct: 381 KKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM 440

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N ++A   +   ++KG  PN  TY+ LI GY +        ++  EME K + P + +Y
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISY 500

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI+ LC+   + EA+     M    +VP   IY  L+      G    A    +EMV+
Sbjct: 501 GCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVA 560

Query: 367 EGLKPS 372
             + P+
Sbjct: 561 REIVPT 566



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G  +   + + L++ + K    +    + +  LEN   P      T+++  C+ G + 
Sbjct: 350 RKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                ++++      P  +   SL+ +  + + +EE    +K+M+ K ++ +   Y+ ++
Sbjct: 410 KAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +    +    + EEM K+G   N   Y   I   C+   I EA  ++ +M + G+ 
Sbjct: 470 DGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  + +N+LI+G   A +++++  + ++M++R+++P+   +N +I  LC+ G   +A  +
Sbjct: 530 PNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENL 589

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            +    KG S + ITY+ LI GY+  G +Q+ L+LY  M+   I PTL  Y  LI+    
Sbjct: 590 ASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG--- 646

Query: 316 CGK--LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           CGK  L   +K ++ M   +LVP   IY +L+  ++E G+  KA  L   M ++G++P  
Sbjct: 647 CGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDK 706

Query: 374 -SYLC 377
            +Y C
Sbjct: 707 MTYNC 711



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 174/368 (47%), Gaps = 7/368 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   S+ S N  +  +  + R +   +++  ++E+   P++      I A  K G 
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  ++++  +     SP V V   +I  + +E+R+++   L   ML + +  + I Y+ 
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  LE A  + E M           + + +   C    +EEA  +++EME  G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK---LLPSCSAFNEMIRRLCECGNAK 250
             P   T+  L +G  K   ++ S++  E+ + +    L  +CS    ++  LC+ GN +
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSI---LLNALCKEGNME 374

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L   L+ G +P  + ++ ++ GY + G+I +      +ME   + P    Y SL+
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+   +EEA+K  K M    ++P V+ Y +L+  +       +   + EEM  +GLK
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494

Query: 371 PST-SYLC 377
           P+  SY C
Sbjct: 495 PNVISYGC 502



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 175/369 (47%), Gaps = 3/369 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+  E A    + + ++G   ++ ++NTLI    +S   D  ++I + M +    PN  +
Sbjct: 440 MKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVIS 499

Query: 61  IRTLISALCKGGQ-LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
              LI+ LCK    L+  V + D +H +   P   +   LI       ++++       M
Sbjct: 500 YGCLINCLCKDANILEAEVILGDMVH-RGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEM 558

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           + + ++   + Y++++    K   +  A  +  E+ ++G S +   Y + I  Y   G +
Sbjct: 559 VAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNV 618

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           ++A  L + M+ +G+KP   T++ LI GC K   +     Y ++M+   L+P    +N +
Sbjct: 619 QKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIY-QEMLQMNLVPDRVIYNAL 677

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I    E G+ ++A  + +    +G  P+++TY+ LI G+ KEG + +V  L  +M+ + +
Sbjct: 678 IHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGL 737

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y  LI   C+    + A  +++ M  +   P V I ++L+    E+G    A  
Sbjct: 738 IPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADV 797

Query: 360 LCEEMVSEG 368
           +C EM  +G
Sbjct: 798 ICSEMNMKG 806



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 137/290 (47%), Gaps = 37/290 (12%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA-YSLIVYAKVKMRNLESAL 148
           +PM  + + ++L I  E ++      L  +++K+ +  ++A  +L + + V  +  E  L
Sbjct: 108 TPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL 167

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            ++ E+++ G   + F+Y   I A  + G ++ A  LM  M+  G+ P    +N++I G 
Sbjct: 168 QLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGL 227

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K KR++++    ++M+ R++ P+   +N +I   C+ G                     
Sbjct: 228 CKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVG--------------------- 266

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
                         +++E   +   M+ +++ PT+  + SL++ LC+   +EEA +  + 
Sbjct: 267 --------------QLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEE 312

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           M+ +  VP    Y +L   HL+ GN   ++ L EE V +G++    Y CS
Sbjct: 313 MEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQ-ILDYTCS 361



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 145 ESALVVYEEML--KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           E+A  +   ML  K  FS+ S +YT F                   + +  +KP     +
Sbjct: 77  ETARRLIRSMLLPKSPFSSPSHLYTLF------------------SLSSTPMKPLFS--D 116

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +L+  C+++K + ES      M    +LPS ++ N  +  L      +    + +  ++ 
Sbjct: 117 MLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVES 176

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P++  Y   I    K G+++  ++L   M+   +SP +  Y  +I  LC+  ++++A
Sbjct: 177 GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +K F  M    + P    Y +L+  + + G   +A ++ E M  E ++P+
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPT 286


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 176/363 (48%), Gaps = 8/363 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLI 65
           A ++   +  RG + ++++FN++I  + KSDR+   ++++  M L++   P++ T  TLI
Sbjct: 449 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLI 508

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L + G+      +LD +      P        I  + +   +   + +  RML   ++
Sbjct: 509 DGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELV 564

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + +++++    K  N E A  ++EEM+ +    +   +   I   C+ G++E A  +
Sbjct: 565 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 624

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M N G+ P   T+N L+ G  K+ RIEE+  + E+M+S   +P    +  ++  LC 
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 684

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A  +++     G+ P+ +TY+ L+ G  K G+ ++ + +  EM  K   P +  
Sbjct: 685 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744

Query: 306 YTSLISSLCQCGKLEEADKYFKIMK---SHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           Y +LI SLC+ G LEEA +    M    S   VP V  Y  L+    + G   +A  L +
Sbjct: 745 YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ 804

Query: 363 EMV 365
           EM+
Sbjct: 805 EMM 807



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 177/378 (46%), Gaps = 18/378 (4%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M LFE        L +RG    ++++NTLI  + K+   +   R++  M      PN  T
Sbjct: 236 MELFE-------ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVT 288

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCS--PMVIVNTSLILRIIQEERIEEGMVLLKR 118
              LI+ LCK G++    +++  +  K C   P +I   S +  + ++    E   L+ R
Sbjct: 289 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-R 347

Query: 119 MLRKNMIH---DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            LR   +    DT+ +S ++    K   ++ A  V+++M+  G+  N   Y   +   C+
Sbjct: 348 SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 407

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K+E A+ +++ M + G+ P   T+++L++   KA R++E+L     M SR   P+   
Sbjct: 408 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 467

Query: 236 FNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           FN +I  LC+   + +A  M   +AL  G  P++ITY  LI G  + G   +   L   M
Sbjct: 468 FNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                 P   A+   I+ L + G +  A + +  M    LVP    +  L+    + GN 
Sbjct: 528 P----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNF 583

Query: 355 AKALHLCEEMVSEGLKPS 372
            +A  L EEMV++ L+P 
Sbjct: 584 EQASALFEEMVAKNLQPD 601



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 5/355 (1%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S   ++F+TLI  + K  + D    ++  M+     PN  T   L++ LCK  +++    
Sbjct: 357 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 416

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           M++ +  K  +P VI  + L+    +  R++E + LL  M  +    + + ++ I+    
Sbjct: 417 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 476

Query: 140 KMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           K      A  ++++M LK G   +   Y T I      G+  +A  L+  M +    P  
Sbjct: 477 KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDT 532

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
             FN  I G +K   +  +L    +M+  +L+P    FN +I   C+ GN +QA+ +   
Sbjct: 533 YAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEE 592

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            + K   P+ +T+  LI G  K G+++    +   M    + P +  Y +L+  LC+ G+
Sbjct: 593 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR 652

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +EEA ++ + M S   VP    Y SLV           AL L  E+ S G  P T
Sbjct: 653 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 707



 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 5/356 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  ++I++N L++ + K+D+ +    + + M++    P+  T   L+ A CK  ++   
Sbjct: 390 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 449

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKNMIHDTIAYSLIVY 136
           +++L  +  + C+P V+   S+I  + + +R  E   +   M L+  ++ D I Y  ++ 
Sbjct: 450 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLID 509

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +      A    E +L      +++ +   I    + G +  A  +   M    L P
Sbjct: 510 GLFRTGRAGQA----EALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVP 565

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TFN+LI G  KA   E++ +  E+M+++ L P    F  +I  LC+ G  + A  +L
Sbjct: 566 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 625

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            L  + G  PN +TY+ L+ G  K G I+E  +   EM      P    Y SL+ +LC+ 
Sbjct: 626 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 685

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + ++A +    +KS    P    Y  LV    + G   +A+ + EEMV +G  P 
Sbjct: 686 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 178/367 (48%), Gaps = 11/367 (2%)

Query: 9    DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            + C++LE+    G     I++ +L++ + ++ R D   ++   +      P+  T   L+
Sbjct: 655  EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV 714

Query: 66   SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM---LRK 122
              L K GQ +  + +L+ + GK   P V+   +LI  + +   +EE   L   M   + +
Sbjct: 715  DGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSR 774

Query: 123  NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA--NSFVYTTFIGAYCEYGKIE 180
              + + + YS+++    K+  ++ A  + +EM+++      N   Y +F+   C+   + 
Sbjct: 775  CCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMA 834

Query: 181  EANCLMQEMENAGLK--PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
            EA  LM+ + +  L+  P   TF+ LI+G  K  + +E+ +  + M++   +P+   +N 
Sbjct: 835  EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNV 894

Query: 239  MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            ++  LC+    ++A+ M+   +DKG +P+ ITYS L+  + K   + E L+L + M  + 
Sbjct: 895  LMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRG 954

Query: 299  ISPTLPAYTSLISSLCQCGKLEEADKYFKIMK-SHSLVPGVDIYESLVGIHLEKGNKAKA 357
             +P +  + S+I  LC+  +  EA + F  M   H L P    Y +L+      G   +A
Sbjct: 955  CTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQA 1014

Query: 358  LHLCEEM 364
              L + M
Sbjct: 1015 EVLLDAM 1021



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 168/356 (47%), Gaps = 40/356 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G + +++++NT+I+ + KS+       +++ ++E   +P+  T  TLI +LCK G 
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+       R+HG                                M  ++ + + + YS+
Sbjct: 267 LEEA----RRLHGD-------------------------------MSSRSCVPNVVTYSV 291

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSA--NSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++    K+  ++ A  + +EM ++      N   Y +F+   C+     EA  LM+ + +
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351

Query: 192 AGLK--PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
             L+  P   TF+ LI+G  K  +I+E+ S  + M++   +P+   +N ++  LC+    
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A+ M+   +DKG +P+ ITYS L+  + K   + E L+L + M  +  +P +  + S+
Sbjct: 412 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 471

Query: 310 ISSLCQCGKLEEADKYFKIMK-SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           I  LC+  +  EA + F  M   H LVP    Y +L+      G   +A  L + M
Sbjct: 472 IDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 180/385 (46%), Gaps = 14/385 (3%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E A D+   +   G   +++++N L+H + KS R +   +  + M+ +   P+  T  +L
Sbjct: 619  EAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSL 678

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            + ALC+  +    + ++  +      P  +    L+  + +  + E+ + +L+ M+ K  
Sbjct: 679  VYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGH 738

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEM---LKRGFSANSFVYTTFIGAYCEYGKIEE 181
              D + Y+ ++ +  K  +LE A  ++ +M   + R    N   Y+  I   C+ G+I+E
Sbjct: 739  HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDE 798

Query: 182  ANCLMQEM--ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK-----LLPSCS 234
            A  L+QEM  ++  + P   T+N  ++G  K   + E+   CE M S +     + P   
Sbjct: 799  ARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA---CELMRSLRDGSLRVSPDTV 855

Query: 235  AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             F+ +I  LC+CG   +A  +    +  G+ PN +TY+ L+ G  K  +++    +   M
Sbjct: 856  TFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESM 915

Query: 295  EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
              K ++P +  Y+ L+ + C+   ++EA +    M S    P V  + S++    +    
Sbjct: 916  VDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQS 975

Query: 355  AKALHLCEEM-VSEGLKPSTSYLCS 378
             +A  + ++M +  GL P     C+
Sbjct: 976  GEAFQMFDDMTLKHGLAPDKITYCT 1000



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 180/410 (43%), Gaps = 52/410 (12%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A  +   L+  G+    +++N L+  + KS + +    + + M+    +P+  T  TLI 
Sbjct: 691  ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750

Query: 67   ALCKGGQLQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +LCK G L+     + DM  R+  + C P V+  + LI  + +  RI+E   L++ M+RK
Sbjct: 751  SLCKAGDLEEARRLHGDMSSRVS-RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 123  ------NMI---------------------------------HDTIAYSLIVYAKVKMRN 143
                  N+I                                  DT+ +S ++    K   
Sbjct: 810  SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 144  LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             + A  V+++M+  G+  N   Y   +   C+  K+E A+ +++ M + G+ P   T+++
Sbjct: 870  TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 204  LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT-LALDK 262
            L++   KA  ++E+L     M SR   P+   FN +I  LC+   + +A  M   + L  
Sbjct: 930  LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKH 989

Query: 263  GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
            G +P++ITY  LI G  + G   +   L   M      P   A+   I+ L    KL + 
Sbjct: 990  GLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGL---SKLGDV 1042

Query: 323  DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +    M    LVP    +  L+    + GN  +A  L EEMV++ L+P 
Sbjct: 1043 SRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 1092



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 164/364 (45%), Gaps = 14/364 (3%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK-GGQLQT 76
           GF  ++ SFN  ++++ KS        +++  L     PN  T  TL+ A  K GG ++ 
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLIL----RIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            +    RI         + + +++L    R  +  R  E  +    M R  +    + Y+
Sbjct: 166 TLGFFRRIRSSS---RSVADYNIVLQSLCRAGETARALE--IFRGEMARDGVAPTIVTYN 220

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I+    K   L + + ++EE+++RG   +   Y T I + C+ G +EEA  L  +M + 
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR--KLLPSCSAFNEMIRRLCECGNAK 250
              P   T+++LI G  K  RI+E+    ++M  +   +LP+   +N  +  LC+     
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 340

Query: 251 QANGMLTLALDKGF--SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
           +A  ++    D     SP+ +T+S LI G  K G+I E   ++ +M      P +  Y +
Sbjct: 341 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 400

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L++ LC+  K+E A    + M    + P V  Y  LV    +     +AL L   M S G
Sbjct: 401 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 460

Query: 369 LKPS 372
             P+
Sbjct: 461 CTPN 464



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 8/272 (2%)

Query: 20   SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
            S   ++F+TLI  + K  + D    ++  M+     PN  T   L++ LCK  +++    
Sbjct: 851  SPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHA 910

Query: 80   MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
            M++ +  K  +P VI  + L+    +   ++E + LL  M  +    + + ++ I+    
Sbjct: 911  MIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLC 970

Query: 140  KMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K      A  ++++M LK G + +   Y T I      G   +A  L+  M +    P  
Sbjct: 971  KSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDT 1026

Query: 199  ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
              FN  I G +K   +  +L    +M+  +L+P    FN +I   C+ GN +QA+ +   
Sbjct: 1027 YAFNCCINGLSKLGDVSRAL---HRMLELELVPDKVTFNILIAGACKAGNFEQASALFEE 1083

Query: 259  ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
             + K   P+ +T+  LI G  K G+++    +
Sbjct: 1084 MVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 5/349 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN +I  + K DR +   ++   ML     P++ T   L++ LCK G++    D+  RI
Sbjct: 283 TFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI 342

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRN 143
                 P  ++  +LI   +   R+++   +L  M+    ++ D   Y+ ++Y   K   
Sbjct: 343 P----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  AL V  +M  +G   N + YT  +  +C+ GKI+EA  L+ EM   GLKP    FN 
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNC 458

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI    K  RI E++    +M  +   P    FN +I  LCE    K A  +L   + +G
Sbjct: 459 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 518

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              N +TY+ LI  + + GEI+E  KL  EM ++        Y SLI  LC+ G++++A 
Sbjct: 519 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKAR 578

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F+ M    LVP       L+      G   +A+   +EMV  G  P 
Sbjct: 579 SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 627



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 165/350 (47%), Gaps = 1/350 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDMLD 82
           + FNTLIH      R D    +   M+ +    P+  T  +LI    K G +   +++L 
Sbjct: 348 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLR 407

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +  K C P V   T L+    +  +I+E   LL  M    +  +T+ ++ ++ A  K  
Sbjct: 408 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEH 467

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            +  A+ ++ EM ++G   + + + + I   CE  +I+ A  L+++M + G+     T+N
Sbjct: 468 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 527

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            LI    +   I+E+     +M+ +  L     +N +I+ LC  G   +A  +    L  
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 587

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P+ I+ + LI G  + G ++E ++   EM  +  +P +  + SLI+ LC+ G++E+ 
Sbjct: 588 GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              F+ +++  + P    Y +L+    + G    A  L +E + +G  P+
Sbjct: 648 LTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 697



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 151/305 (49%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    + ++N+LI+   K     L   + + M      PN  +   L+   CK G++   
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++L+ +      P  +    LI    +E RI E + + + M RK    D   ++ ++  
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++  ++ AL +  +M+  G  AN+  Y T I A+   G+I+EA  L+ EM   G    
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           + T+N LI+G  +A  ++++ S  E+M+   L+PS  + N +I  LC  G  ++A     
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQK 617

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G +P+ +T++ LI G  + G I++ L ++ +++ + I P    Y +L+S LC+ G
Sbjct: 618 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGG 677

Query: 318 KLEEA 322
            + +A
Sbjct: 678 FVYDA 682



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 146/311 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L  +A +V R +  +G   ++ S+  L+    K  + D  + +   M  +   PN     
Sbjct: 398 LVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFN 457

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LISA CK  ++   V++   +  K C P V    SLI  + + + I+  + LL+ M+ +
Sbjct: 458 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 517

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ +T+ Y+ ++ A ++   ++ A  +  EM+ +G   +   Y + I   C  G++++A
Sbjct: 518 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKA 577

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L ++M   GL P   + N+LI G  ++  +EE++ + ++M+ R   P    FN +I  
Sbjct: 578 RSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 637

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G  +    M      +G  P+ +TY+ L+    K G + +   L  E       P 
Sbjct: 638 LCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 697

Query: 303 LPAYTSLISSL 313
              ++ L+ SL
Sbjct: 698 DRTWSILLQSL 708



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 5/225 (2%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V+ +ML R      F +   + A C   +++ A  ++++M   G  P    +  LI   +
Sbjct: 198 VFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLS 257

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  R+ E+L   E+M     +P    FN++I  LC+     +A  M+   L +GF+P++I
Sbjct: 258 KCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDI 317

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY +L+ G  K G +     L+Y +      PT   + +LI      G+L++A      M
Sbjct: 318 TYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDM 373

Query: 330 -KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             S+ +VP V  Y SL+  + +KG    AL +  +M ++G KP+ 
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNV 418



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 170/413 (41%), Gaps = 42/413 (10%)

Query: 2   RLFEVAFDVCRYLE-------QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR 54
           +L E+  DV   +E       Q+G+  S   +  LI  +  +     + R+   M +   
Sbjct: 77  KLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGI 136

Query: 55  YPNEATIRTLISALCKGG-QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE-G 112
              E+   +++    K G   QT   ML+  +   C P    + +++L I+      +  
Sbjct: 137 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEP-TFKSYNVVLEILVSGNCHKVA 195

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
             +   ML + +      + +++ A   +  ++SAL V  +M K G   NS +Y T I +
Sbjct: 196 ANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHS 255

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
             +  ++ EA  L++EM   G  P  ETFN +I G  K  RI E+     +M+ R   P 
Sbjct: 256 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPD 315

Query: 233 CSAFNEMIRRLCECGNAKQA-------------------NGMLT-------------LAL 260
              +  ++  LC+ G    A                   +G +T             +  
Sbjct: 316 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVT 375

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G  P+  TY+ LI GY K+G +   L++  +M  K   P + +YT L+   C+ GK++
Sbjct: 376 SYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKID 435

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA      M +  L P    +  L+    ++    +A+ +  EM  +G KP  
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 488



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/214 (18%), Positives = 92/214 (42%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +   G   + +++NTLI+   +        ++   M+      +E T  +LI 
Sbjct: 507 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIK 566

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G++     + +++      P  I    LI  + +   +EE +   K M+ +    
Sbjct: 567 GLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 626

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++    +   +E  L ++ ++   G   ++  Y T +   C+ G + +A  L+
Sbjct: 627 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLL 686

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            E    G  P D T+++L++     + ++    Y
Sbjct: 687 DEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFY 720


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 177/369 (47%), Gaps = 3/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++     +  GF LSL S N L+  + K ++   V  +Y+ M++   + N  T    I+
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRKN 123
            LC+ G+L    D ++ +     SP V+   +L+    +     ++ +    +K ML   
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + ++ ++    K  N+ +A   +EEM K+G   N   Y + I   C  GK+EEA 
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M   GLKP   T+N LI G  K K ++E+    + +  ++L+P+   FN MI   
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAY 388

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++   + +  LD+G  PN  TY+ LI G  ++ ++Q   +L  EME K +   +
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI  LC+  K   A+K    M +  L P    Y +L+  +  +G    AL++   
Sbjct: 449 VTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTR 508

Query: 364 MVSEGLKPS 372
           M  E  +P+
Sbjct: 509 MEKERKQPN 517



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 3/349 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRT 63
           A D    ++  G S +++++NTL+    K      +++     + ML N   PNE T  T
Sbjct: 219 AEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNT 278

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK   +       + +  +   P ++   SLI  +    ++EE + L  +M+   
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ ++    K + ++ A  V++++ K+    N   + T I AYC+ G +EE  
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M + G+ P   T+N LI G  + + ++ +     +M ++ L      +N +I  L
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+   ++ A  +L    + G  PN +TY+ L+ GY  EG+++  L +   ME +   P +
Sbjct: 459 CKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV 518

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
             Y  LI   C+  KLE A+     M    L P    Y+ +    LEKG
Sbjct: 519 VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 51/310 (16%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+   +   G   +++++N LI+   K        +++  + +    PN  T  T
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNT 383

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I A CK G +                                   EEG  L   ML + 
Sbjct: 384 MIDAYCKEGMM-----------------------------------EEGFSLCSSMLDEG 408

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   Y+ ++    + ++L++A  +  EM  +G   +   Y   I   C+  K   A 
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM N GLKP   T+N L++G     +++ +L+   +M   +  P+   +N +I+  
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGY 528

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+    + ANG+L   L+KG +PN  TY              ++++L  EM  K  SP +
Sbjct: 529 CKINKLEAANGLLNEMLEKGLNPNRTTY--------------DIVRL--EMLEKGFSPDI 572

Query: 304 PAYTSLISSL 313
             +   ISS+
Sbjct: 573 EGHLYNISSM 582



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 121/292 (41%), Gaps = 40/292 (13%)

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
            ++V A VK   L  A   +      GF  +       + A  +  KI +   + +EM  
Sbjct: 134 DMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK 193

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK- 250
             +     TFN+ I G  +A ++ ++    E M +  + P+   +N ++   C+ G+A  
Sbjct: 194 RRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGK 253

Query: 251 --QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A   +   L     PNE+T++ LI G+ K+  +    K + EM+ + + P +  Y S
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313

Query: 309 LISSLCQCGKLE-----------------------------------EADKYFKIMKSHS 333
           LI+ LC  GKLE                                   EA K F  +    
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS-YLC-SASTCR 383
           LVP V  + +++  + ++G   +   LC  M+ EG+ P+ S Y C  A  CR
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 180/369 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A +V   ++ +G   +L ++NTL+  + K+ + D   R+   M +N   P+  T   
Sbjct: 60  WEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNC 119

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LIS L K G+L     +   +  + C P      SLI  + +  R ++ M LL+ M R  
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + YS ++    K      A  +++EM +RG   +S  +T  + A  + G++++A 
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM+  G+KP   T+N LI G  K   + E+ +  ++M      P    ++ +I  L
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +     +A  +L     +G  P+ ITY+ LI G  K G + +  +L+  M+ K  +P +
Sbjct: 300 IKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDV 359

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y++LI++L +  ++E A   F+ M+S  + P +  Y S++ +  + G    A  L  E
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419

Query: 364 MVSEGLKPS 372
           M  +GL P 
Sbjct: 420 MRGKGLSPD 428



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 174/371 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  +   +   G    + ++N LI  + K+ R    + ++  M E    P+  T  +
Sbjct: 95  FDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNS 154

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L K G+ Q  +++L+ +    C P V+  +SLI  + ++    +   L + M R+ 
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG 214

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D+I ++ ++ A  K   ++ AL + +EM +RG       Y   I  + + G + EA 
Sbjct: 215 RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAY 274

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM+  G KP   T++ LI G  KA +++E+    ++M      P    +N +I  L
Sbjct: 275 NLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGL 334

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G    A  +      KG +P+ +TYS LI    K   ++    L+ EME   I P L
Sbjct: 335 GKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDL 394

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I+ L + G++++AD+ F  M+   L P V  Y + +      G   +A  + E+
Sbjct: 395 FTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFED 454

Query: 364 MVSEGLKPSTS 374
           M   GL P  +
Sbjct: 455 MKESGLLPDVA 465



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 169/366 (46%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           ++  ++S++ LI+ + ++ + +    +   M      PN  T  TL+  L K GQ    +
Sbjct: 40  WTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEAL 99

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
            +L  +    C P V     LI  + +  R+ E   L   M  +  + DT  Y+ ++Y  
Sbjct: 100 RLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGL 159

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K+   + A+ + EEM + G   +   Y++ I    + G+  +A  L QEM+  G KP  
Sbjct: 160 GKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDS 219

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            TF  L++   KA R++++L   ++M  R + P    +N +I    + G+  +A  +L  
Sbjct: 220 ITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
               G  P+ +TYS LI G  K  ++ E  ++  +ME +   P    Y +LI+ L + G 
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           L +A + F  MKS    P V  Y +L+    +      A  L EEM S G++P     CS
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399

Query: 379 ASTCRG 384
             T  G
Sbjct: 400 IITVLG 405



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 146/289 (50%), Gaps = 1/289 (0%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           SP V+   SL+  + +  + EE  +L + +       D ++YS ++ +  +    E+AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V  EM  +G   N + Y T +    + G+ +EA  L+ EM + G  P   T+N LI    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           KA R+ E+ +   +M  R  +P    +N +I  L + G +++A  +L      G  P+ +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TYS LI G  K+GE  +  KL+ EM+ +   P    +T+L+ +L + G++++A +    M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYLC 377
           K   + PGV  Y +L+    + G+  +A +L +EM   G KP   +Y C
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 167/339 (49%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +++ G    +++++ LI  + K+ + D   ++ + M +    P+  T  TLI+
Sbjct: 273 AYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLIN 332

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K G L     + DR+  K C+P V+  ++LI  + +  R+E   VL + M    +  
Sbjct: 333 GLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQP 392

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y  I+    K   ++ A  ++ EM  +G S +   Y  F+ +    G+ +EA  + 
Sbjct: 393 DLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIF 452

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M+ +GL P   T++ L+ G +K K ++++    ++++ +        F+E +  L   
Sbjct: 453 EDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSW 512

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN  +A+ +L  A  KG  P   +Y+ LI   AK G + E      +++ +   P + +Y
Sbjct: 513 GNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSY 572

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +SLIS+L Q G+++ A +  + M    L      Y +LV
Sbjct: 573 SSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 174/376 (46%), Gaps = 3/376 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + + +++RG     I+F  L+  + K+ R D    +   M E    P   T   LI+
Sbjct: 203 AFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIA 262

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G L    ++LD +    C P V+  + LI  +I+  +++E   +LK+M ++    
Sbjct: 263 GFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DTI Y+ ++    K   L  A  +++ M  +G + +   Y+T I A  +  ++E A  L 
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLF 382

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EME+ G++P   T+  +I    KA +++++     +M  + L P    +N  +  L   
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  K+A  +     + G  P+  TY  L+ G +K  E+ +   L  E+  +  +     +
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
              +  L   G ++EA +  +   S  L PG   Y +L+    + G  ++A +  E++  
Sbjct: 503 DECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKE 562

Query: 367 EGLKP---STSYLCSA 379
           +G KP   S S L SA
Sbjct: 563 QGGKPDIVSYSSLISA 578



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 4/368 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLV--WRIYQHMLENIRYPNEATIRTL 64
           A ++   +++RG    ++++N LI    K    DLV  + +   M  N   P+  T   L
Sbjct: 238 ALELLDEMKERGVKPGVVTYNALIAGFGKV--GDLVEAYNLLDEMKRNGCKPDVVTYSCL 295

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ L K  QL     +L ++  + C P  I   +LI  + +   + +   L  RM  K  
Sbjct: 296 ITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGC 355

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + YS ++ A  K   +ESA V++EEM   G   + F Y + I    + G++++A+ 
Sbjct: 356 NPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADR 415

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM   GL P   T+N  +    +  R +E+    E M    LLP  + ++ ++  L 
Sbjct: 416 LFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLS 475

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +      A G+L   +++G + + + +   +      G + E  +L      K + P   
Sbjct: 476 KTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGAS 535

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +Y +LI +L + G++ EA    + +K     P +  Y SL+    + G    A  L EEM
Sbjct: 536 SYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEM 595

Query: 365 VSEGLKPS 372
              GLK S
Sbjct: 596 SKRGLKLS 603



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 169/357 (47%), Gaps = 1/357 (0%)

Query: 17  RGF-SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +GF S +++++N+L++ + K+ + +    +++ +      P+  +   LI++L + G+ +
Sbjct: 2   KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             ++++  +  K C P +    +L+  + +  + +E + LL  M     + D   Y+ ++
Sbjct: 62  AALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLI 121

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   L  A  ++ EM +RG   ++F Y + I    + G+ ++A  L++EME  G  
Sbjct: 122 STLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCP 181

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++ LI G  K     ++    ++M  R   P    F  ++  L + G    A  +
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L    ++G  P  +TY+ LI G+ K G++ E   L  EM+     P +  Y+ LI+ L +
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +L+EA +  K M+     P    Y +L+    + G    A  L + M S+G  P 
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 172/351 (49%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+ T+IH   K D     + ++  ML+    P+  T  ++I  LCK   +    ++L
Sbjct: 120 NVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVL 179

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  K   P      SL+   +   +++E + +LK+M R     + + YS+++    K 
Sbjct: 180 RQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKF 239

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  +   M++   + N   Y   +  Y   G + E N L+  M   G++P    F
Sbjct: 240 GGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIF 299

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+ I    K  R++E++    +M  + L+P   ++  MI  LC+ G    A       +D
Sbjct: 300 NIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMID 359

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ + +++LI G++  G+ ++  +L+YEM  + I PT+  +T++I  L + GK+ E
Sbjct: 360 DGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTE 419

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A   F +M   S+ P V  Y +++  +   G   + L L ++M+S GLKP+
Sbjct: 420 AKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPN 470



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 159/367 (43%), Gaps = 16/367 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V R +  +       ++N+L+H    S +     RI + M  + + PN  T   LI 
Sbjct: 175 AEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLID 234

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G      ++L+ +   R +P V     L+     +  + E   L+  M++  +  
Sbjct: 235 CLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRP 294

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +++ +YA VK   L+ A++ + +M ++G   +   Y T I   C+ G+++ A    
Sbjct: 295 DHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQF 354

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M + GL P    F  LI G +   + E++     +MM R + P+   F  MI +L + 
Sbjct: 355 CQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKE 414

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +  L       PN ++Y+ +I GY   G++ EVLKL  +M    + P    +
Sbjct: 415 GKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTF 474

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +L+                  M S  L P V    +L+    E G     L L  EM+S
Sbjct: 475 NTLLDD----------------MLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLS 518

Query: 367 EGLKPST 373
           +  K  T
Sbjct: 519 KAAKTDT 525



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/372 (20%), Positives = 163/372 (43%), Gaps = 3/372 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIR 62
             +AF     + + G   + ISF  ++  +    R      I       +   P+  +  
Sbjct: 29  LNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYT 88

Query: 63  TLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            L+  LC   + +  VD++  +   G  C P V+  T++I    +E+ + +   L   ML
Sbjct: 89  VLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEML 148

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  D +  + I+    K++ ++ A  V  +M  +    +   Y + +  Y   G+++
Sbjct: 149 DRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLK 208

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  ++++M   G  P   T+++LI+   K     E+      M+  +  P+ + +  ++
Sbjct: 209 EAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLL 268

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                 G+  + N ++ L +  G  P+   ++  I  Y K G + E +  + +M  + + 
Sbjct: 269 HGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLM 328

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P + +Y ++I  LC+ G+L+ A   F  M    L P + ++ +L+      G   KA  L
Sbjct: 329 PDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEEL 388

Query: 361 CEEMVSEGLKPS 372
             EM+  G++P+
Sbjct: 389 FYEMMDRGIRPT 400



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 163/369 (44%), Gaps = 10/369 (2%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEATIRTLISA 67
           V R+  + G +  + S+  L+  +    + +    +   M E+  +  PN  +  T+I  
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 68  LCK----GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
             K    G     + +MLDR       P V+   S+I  + + + +++   +L++M  K+
Sbjct: 131 FFKEDEVGKAYTLFCEMLDR----GIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D   Y+ +V+  +    L+ A+ + ++M + G   N   Y+  I   C++G   EA 
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAR 246

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M  +   P   T+  L+ G A    + E  +  + M+   + P    FN  I   
Sbjct: 247 EILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAY 306

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +CG   +A         +G  P+ I+Y  +I G  K G +   +  + +M    +SP +
Sbjct: 307 VKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDI 366

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +T+LI      GK E+A++ F  M    + P V ++ +++    ++G   +A  L + 
Sbjct: 367 VVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDL 426

Query: 364 MVSEGLKPS 372
           M    +KP+
Sbjct: 427 MPIASVKPN 435



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 109/262 (41%), Gaps = 3/262 (1%)

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           + R   K +   T+ Y++++     +  L  A     +++K G  AN+  +T  +   C 
Sbjct: 1   MARAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCA 60

Query: 176 YGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM--SRKLLPS 232
             +  +A N +++     G  P   ++ +L++G    K+ EE++     M        P+
Sbjct: 61  EKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPN 120

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
             ++  +I    +     +A  +    LD+G  P+ +T + +I G  K   + +  ++  
Sbjct: 121 VVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLR 180

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +M  K I P    Y SL+      G+L+EA +  K M  H   P    Y  L+    + G
Sbjct: 181 QMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFG 240

Query: 353 NKAKALHLCEEMVSEGLKPSTS 374
              +A  +   M+     P+ +
Sbjct: 241 GHTEAREILNSMIQSRGNPNVA 262



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 16/245 (6%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN  I+   K  R D     +  M +    P+  +  T+I  LCK G+L   +    ++ 
Sbjct: 299 FNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMI 358

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
               SP ++V T+LI       + E+   L   M+ + +    + ++ ++    K   + 
Sbjct: 359 DDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVT 418

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +++ M       N   Y   I  Y   GK++E   L+ +M + GLKP   TFN L+
Sbjct: 419 EAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLL 478

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +                 M+S  L P  +  N +I   CE G  +    +    L K   
Sbjct: 479 D----------------DMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAK 522

Query: 266 PNEIT 270
            + +T
Sbjct: 523 TDTVT 527



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 27/214 (12%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q+G    +IS+ T+I  + K  R D     +  M+++   P+      LI      G+
Sbjct: 322 MRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGK 381

Query: 74  LQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
            +     + +M+DR  G R  P V+V T++I ++ +E ++ E   L   M   ++  + +
Sbjct: 382 WEKAEELFYEMMDR--GIR--PTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVV 437

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF-------------------I 170
           +Y+ I++       L+  L + ++ML  G   N+  + T                    I
Sbjct: 438 SYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLI 497

Query: 171 GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            + CE G+IE+   L +EM +   K    T N++
Sbjct: 498 DSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 175/380 (46%), Gaps = 3/380 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +C  + +RG  L  +++N+LI       R   V ++   M+     P++ T   LI 
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G++     +L  +  +   P ++   +L+      E + E   L  RM+++ +  
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y++++    K + ++ A+V+++E+  +        Y + I   C  G+I     L+
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM  +   P   T+N+LI+   K  RI E+L     MM + + P+   +N M+   C  
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N   A  +    +  G  P+ + Y+ LI GY K   + E + L+ EM +K++ P + +Y
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  LC  G++    +    M      P V  Y  L+    +     KA+ L  ++V 
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV- 572

Query: 367 EGLKPS--TSYLCSASTCRG 384
           EG+ P   T++    + C+G
Sbjct: 573 EGIWPDFYTNHAIVDNLCKG 592



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 168/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  +  A  +   L+ +G S S+ +F  LI+           + +   +L++   PN  T
Sbjct: 68  MGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVT 127

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             T+I+  C  G +   +D    +  +          +LI  + +  +I+  + LL+ M 
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           + ++  + + YS ++    K   +  AL +  ++ +RG   ++  Y + I   C  G+ +
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E   L+ +M    + P D TFN+LI+   K  RI E+      M  R   P    +N ++
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C   N  +A  +    + +G  P+ + Y+ LI GY K   + E + L+ E+  K++ 
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           PT+ +Y SLI  LC  G++    K    M   +  P V  Y  L+    ++G   +AL +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 361 CEEMVSEGLKPS 372
              M+ +G+KP+
Sbjct: 428 LVMMMKKGVKPN 439



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 171/402 (42%), Gaps = 35/402 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D C+ L  +G+     ++ TLI+ ++K+ +      + Q M ++   PN      LI 
Sbjct: 144 ALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID 203

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G +   + +  +I  +      +   SLI       R +E   LL +M+R+N+  
Sbjct: 204 GLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDP 263

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +++++ A  K   +  A  V   M KRG   +   Y   +  YC    + EA  L 
Sbjct: 264 DDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF 323

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   GL+P    +N+LI+G  K K ++E++   +++ ++ L+P+ +++N +I  LC  
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383

Query: 247 GNAK-----------------------------------QANGMLTLALDKGFSPNEITY 271
           G                                      +A G+L + + KG  PN +TY
Sbjct: 384 GRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + ++ GY     +     ++  M    + P +  Y  LI+  C+   ++EA   FK M+ 
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +L+P +  Y SL+      G       L +EM   G  P  
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 164/402 (40%), Gaps = 35/402 (8%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ E A  V   + +RG    ++++N L+      +       ++  M++    P+    
Sbjct: 280 RILE-AQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   CK   +   + +   +  K   P +    SLI  +    RI     LL  M  
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                D + Y++++ A  K   +  AL V   M+K+G   N   Y   +  YC    +  
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   M  +GL+P    +N+LI G  K + ++E++   ++M  + L+P  +++N +I 
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE-------- 293
            LC  G       +L    D G SP+ ITY+ L+  + K     + + L+ +        
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPD 578

Query: 294 --------------------------MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
                                     +     SP +  YT LI++LC+ G   EA     
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            M+ +   P    +E ++G+ L++    KA  L EEM++ GL
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 152/355 (42%), Gaps = 36/355 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG    ++++N LI    K+   D    +++ +      P  A+  +LI  LC  G++ 
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL------------------- 116
               +LD +HG    P V+    LI  + +E RI E + +L                   
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447

Query: 117 ----------------KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
                            RM++  +  D + Y++++    K   ++ A+V+++EM  +   
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLI 507

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            +   Y + I   C  G+I     L+ EM ++G  P   T+N+L++   K +  ++++S 
Sbjct: 508 PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL 567

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
             Q++   + P     + ++  LC+    K A   L   L  G SPN  TY+ LI    K
Sbjct: 568 FRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
           +G   E + L  +ME     P    +  +I  L Q  + ++A+K  + M +  LV
Sbjct: 627 DGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 133/328 (40%), Gaps = 35/328 (10%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           +  M+     P  +    L+ A+ + G   T + +  ++  K  SP +   T LI     
Sbjct: 43  FNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFH 102

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           +                   H   A+SL+                   +LK G+  N   
Sbjct: 103 QS------------------HTAFAFSLLA-----------------TILKSGYQPNLVT 127

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + T I  +C  G I +A    Q +   G      T+  LI G +K  +I+ +L   ++M 
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              + P+   ++ +I  LC+ G    A G+ +   ++G   + +TY+ LI G    G  Q
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           EV +L  +M  +++ P    +  LI +LC+ G++ EA     +M      P +  Y +L+
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +  + N  +A  L   MV  GL+P  
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDV 335



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 14/244 (5%)

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +   + RN++ A+  +  M++      + V+   +GA    G    A  L  ++++ G+ 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TF +LI           + S    ++     P+   FN +I   C        NGM
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC-------INGM 140

Query: 256 LTLALD-------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
           +  ALD       +G+  ++ TY  LI G +K G+I+  L L  EME  S+ P L  Y++
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI  LC+ G + +A      +    ++     Y SL+      G   +   L  +MV E 
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260

Query: 369 LKPS 372
           + P 
Sbjct: 261 VDPD 264



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 1/226 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            VA D+   + + G    ++++N LI+   K++  D    +++ M      P+ A+  +L
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G++    ++LD +     SP VI    L+    + +  ++ + L ++++ + +
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGI 575

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D      IV    K   L+ A    + +L  G S N   YT  I A C+ G   EA  
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           L+ +ME+    P   TF ++I    +    +++    E+M++R L+
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 169/362 (46%), Gaps = 35/362 (9%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R++E  GF LS++++N LIH                                    LCKG
Sbjct: 249 RWMEANGFDLSIVTYNVLIH-----------------------------------GLCKG 273

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            ++   V++   + GK  +  V+   +L+L   + ++ E G+ L+  M+         A 
Sbjct: 274 DRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAV 333

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S +V    K   ++ A  +  ++ + GF  N FVY   I + C+ G +++A  L   M  
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSL 393

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             L+P   T+++LI+   ++ R++ ++SY ++M+   +  +  A+N +I   C+ G+   
Sbjct: 394 MNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSA 453

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +     +KG  P   T++ LI GY K+ ++Q+  KLY +M    I+P +  +T+LIS
Sbjct: 454 AESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALIS 513

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC   K+ EA + F  +    + P    Y  L+  +   G   KA  L E+M  +GL P
Sbjct: 514 GLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVP 573

Query: 372 ST 373
            T
Sbjct: 574 DT 575



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/394 (20%), Positives = 167/394 (42%), Gaps = 36/394 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G   +  +F +LI    K  +    +++Y  M++N   PN  T   LIS LC   +
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNK 520

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    ++ D +  ++  P  +    LI    ++ +I++   LL+ M +K ++ DT  Y  
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE---ANC------ 184
           ++        +  A    +++ K+    N   Y+  +  YC+ G++ E   A+C      
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640

Query: 185 --------------------------LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
                                     L+++M + GL+P +  +  +I+  +K    +++ 
Sbjct: 641 INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAF 700

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              + M++ +  P+   +  ++  LC+ G   +A  +          PN ITY   +   
Sbjct: 701 ECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNL 760

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG ++E + L++ M  K +      +  +I   C+ G+  EA K    M  + + P  
Sbjct: 761 TKEGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDC 819

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y +L+  +   GN   ++ L + M++ GL+P 
Sbjct: 820 VTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPD 853



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/441 (22%), Positives = 187/441 (42%), Gaps = 77/441 (17%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIR 62
           +E+   V R+    GF  +L  +N LI+ + K    D    +Y +M L N+R PN  T  
Sbjct: 350 YELVVKVGRF----GFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR-PNGITYS 404

Query: 63  TLISALCKGGQLQTYVDMLDR----------------IHG-------------------K 87
            LI + C+ G+L   +   DR                I+G                   K
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
              P     TSLI    ++ ++++   L  +M+   +  +   ++ ++        +  A
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             +++E+++R        Y   I  YC  GKI++A  L+++M   GL P   T+  LI G
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584

Query: 208 CAKAKRIEESLSYCEQMMSR--------------------KLLPSCSAFNEMIRR----- 242
                R+ ++  + + +  +                    +L+ + SA  EMI+R     
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 243 -LCEC----GNAKQAN-----GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
            +C      G  KQ +      +L    D+G  P+ + Y+ +I  Y+KEG  ++  + + 
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            M  +   P +  YT+L++ LC+ G+++ A   FK M++ ++ P    Y   +    ++G
Sbjct: 705 LMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEG 764

Query: 353 NKAKALHLCEEMVSEGLKPST 373
           N  +A+ L   M+ +GL  +T
Sbjct: 765 NMKEAIGLHHAML-KGLLANT 784



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 159/358 (44%), Gaps = 36/358 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L +R    + +++N LI    +  + D  + + + M +    P+  T R LIS LC  G+
Sbjct: 531 LVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGR 590

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    D +D +H +      +  ++L+    QE R+ E +     M+++ +  D + +++
Sbjct: 591 VSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAV 650

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY-------------------- 173
           ++   +K  + ++   + ++M  +G   ++ +YT+ I  Y                    
Sbjct: 651 LIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEE 710

Query: 174 ---------------CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
                          C+ G+++ A  L + M+ A + P   T+   ++   K   ++E++
Sbjct: 711 CFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAI 770

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                M+ + LL +    N +IR  C+ G   +A  +L+   + G  P+ +TYS LI  Y
Sbjct: 771 GLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEY 829

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            + G +   +KL+  M  + + P L AY  LI   C  G+L++A +    M    ++P
Sbjct: 830 CRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 128/284 (45%), Gaps = 1/284 (0%)

Query: 87  KRCSPMVIVNTSLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           KRC     +  +L+++  +   RI + +V++K M   N++ +    S ++   +K+R   
Sbjct: 148 KRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFI 207

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +   +++E +  G   + +  +  + + CE      A   ++ ME  G      T+N+LI
Sbjct: 208 TVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLI 267

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+ E++     +  + L      +  ++   C     +    ++   ++ GFS
Sbjct: 268 HGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFS 327

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P E   S L+ G  K+G+I +  +L  ++      P L  Y +LI+SLC+ G L++A+  
Sbjct: 328 PTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELL 387

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  M   +L P    Y  L+      G    A+   + M+ +G+
Sbjct: 388 YSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGI 431



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 2/266 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E     C  + QRG ++ L+    LI    K       + + + M +    P+    
Sbjct: 625 RLMEALSASCEMI-QRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIY 683

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            ++I    K G  +   +  D +  + C P V+  T+L+  + +   ++   +L KRM  
Sbjct: 684 TSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQA 743

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
            N+  ++I Y   +    K  N++ A+ ++  MLK G  AN+  +   I  +C+ G+  E
Sbjct: 744 ANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHE 802

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  ++ EM   G+ P   T++ LI    ++  +  S+   + M++R L P   A+N +I 
Sbjct: 803 ATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIY 862

Query: 242 RLCECGNAKQANGMLTLALDKGFSPN 267
             C  G   +A  +    L +G  P+
Sbjct: 863 GCCVNGELDKAFELRDDMLRRGIIPD 888



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 127/319 (39%), Gaps = 56/319 (17%)

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY--CEYG 177
           L KNM H T +Y+++V+A V  R    A  +   +L R  S    V++ F+ +Y  C++ 
Sbjct: 95  LHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRE-SHPKCVFSHFLDSYKRCKFS 153

Query: 178 KIEEANCLMQE----------------MENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
                N L+Q                 M    L P   T + L+ G  K ++        
Sbjct: 154 STLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELF 213

Query: 222 EQMMSRKLLP---SCSA--------------------------------FNEMIRRLCEC 246
           ++ ++  + P   +CSA                                +N +I  LC+ 
Sbjct: 214 DESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKG 273

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +      KG + + +TY  L+ G+ +  + +  ++L  EM     SPT  A 
Sbjct: 274 DRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAV 333

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+  L + GK+++A +    +     VP + +Y +L+    + G+  KA  L   M  
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSL 393

Query: 367 EGLKPS--TSYLCSASTCR 383
             L+P+  T  +   S CR
Sbjct: 394 MNLRPNGITYSILIDSFCR 412


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 181/362 (50%), Gaps = 7/362 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF   ++++N LI+   K+D+ D   RI Q M+     P+  T  +L++ LCK G++ 
Sbjct: 148 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVD 207

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQE-ERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
               ML  I  K  SP VI  ++LI  + +E  R+E    LL++M+      D ++Y+ +
Sbjct: 208 E-ARML--IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNAL 264

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           ++   + + +  AL ++  +L++G+      Y   I    +  ++ EA  L   +   GL
Sbjct: 265 IHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGL 324

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   T+ + I+G  KA R+E++L   + M  +  +P   + N +I  LC+     +A  
Sbjct: 325 EPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEV 384

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L+    KG SPN I+++ LI G  + G+ ++ +  + EM  + + PT+  Y  L+  LC
Sbjct: 385 LLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLC 444

Query: 315 ---QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              Q G+++EA   F  M     VP V  Y +L+    + G    A  L   M ++G  P
Sbjct: 445 KARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIP 504

Query: 372 ST 373
           + 
Sbjct: 505 NV 506



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 182/370 (49%), Gaps = 7/370 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +  FD  R   + GF  + I++N L+  +    R      +Y+ M++    P+  T  TL
Sbjct: 70  QTVFDGMR---KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL 126

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +   CK G+L   + + D    +   P V+   +LI    + ++++E   +L+RM+ +++
Sbjct: 127 LHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESL 186

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC-EYGKIEEAN 183
           + D + Y+ +V    K   ++ A ++   ++ +GFS N   Y+T I   C E  ++E A 
Sbjct: 187 VPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESAR 243

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M   G KP   ++N LI G A+ + + E+L     ++ +   P    +N +I  L
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGL 303

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +     +A  + +  +  G  P+ ITY+  I G  K G +++ L +  +M+ K   P +
Sbjct: 304 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 363

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            ++ ++I+ LC+  +++EA+     M++    P    + +L+      G   KA+   +E
Sbjct: 364 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 423

Query: 364 MVSEGLKPST 373
           M+  G+KP+ 
Sbjct: 424 MLKRGVKPTV 433



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 156/315 (49%), Gaps = 3/315 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G+   + ++N LI  + K DR +  + ++  ++++   P+  T    I  LCK G+++
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 345

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + ML  +  K C P V+ + ++I  + +E+R++E  VLL  M  K    + I+++ ++
Sbjct: 346 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 405

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC---EYGKIEEANCLMQEMENA 192
             + +    + A+  ++EMLKRG       Y   +   C   + G+I+EA  L   M   
Sbjct: 406 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 465

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P   T++ LI+G  KA +++++      M ++  +P+   +N +I  LC      +A
Sbjct: 466 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEA 525

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +    ++KG  P+ ITY  +I    K+  + + L L+       + PT   Y SLI  
Sbjct: 526 LELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDG 585

Query: 313 LCQCGKLEEADKYFK 327
           LC   +++EA K  +
Sbjct: 586 LCAVARVDEALKLLQ 600



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 163/348 (46%), Gaps = 3/348 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  E A  +   +   G    ++S+N LIH + +        +++  +L     P   T
Sbjct: 236 LRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPT 295

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  L K  ++    ++   +      P  I  T  I  + +  R+E+ +++LK M 
Sbjct: 296 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 355

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K  + D ++++ ++    K + ++ A V+   M  +G S N+  + T I   C  GK +
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 415

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAK---RIEESLSYCEQMMSRKLLPSCSAFN 237
           +A    +EM   G+KP   T+N+L++G  KA+   RI+E+++  + M+ +  +P    ++
Sbjct: 416 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 475

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I  L + G    A  +L     KG  PN  TY+ LI G     ++ E L+L+  M  K
Sbjct: 476 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEK 535

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              P    Y ++IS+LC+   +++A   F       +VP   +Y SL+
Sbjct: 536 GCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLI 583



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 161/366 (43%), Gaps = 43/366 (11%)

Query: 12  RYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           R++EQ   +G    + +FN  I  + ++ R      ++  M ++  +PN  T   L+S L
Sbjct: 37  RFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGL 95

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C GG                                   R+ +   L +RM++     D 
Sbjct: 96  CNGG-----------------------------------RMSDAQALYERMIKAGYSPDV 120

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y+ +++   K+  L+ AL +++  +KRGF  +   Y   I  +C+  K++EA  ++Q 
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC-ECG 247
           M +  L P   T+N L+ G  K  R++E+      ++ +   P+   ++ +I  LC E  
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELR 237

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             + A  +L   +  G  P+ ++Y+ LI G A+E  + E LKL+  +  +   P +P Y 
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            LI  L +  ++ EA + F  +  H L P    Y   +    + G    AL + ++M  +
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 368 GLKPST 373
           G  P  
Sbjct: 358 GCVPDV 363



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 143/300 (47%), Gaps = 11/300 (3%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           + T  D L RI+    SP       L+  +++  +IE+    ++++L K +  D   +++
Sbjct: 1   MHTVYDKLVRIY----SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNI 55

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +    +   +  A  V++ M K GF  N   Y   +   C  G++ +A  L + M  AG
Sbjct: 56  YISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAG 115

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N L+ G  K  +++E+L   +  + R  +P    +N +I   C+     +A 
Sbjct: 116 YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQ 175

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   + +   P+ +TY+ L+ G  K G + E   L  +   K  SP +  Y++LIS L
Sbjct: 176 RILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGL 232

Query: 314 C-QCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKP 371
           C +  +LE A +  + M  +   P +  Y +L+ G+  E+G  ++AL L   ++ +G +P
Sbjct: 233 CRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG-VSEALKLFGSVLRQGYEP 291



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 5/224 (2%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           VY++++ R +S +++     + +  + GKIE+A+  ++++   GL     TFN+ I G  
Sbjct: 4   VYDKLV-RIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDI-STFNIYISGLC 61

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +A RI ++ +  + M      P+   +N ++  LC  G    A  +    +  G+SP+ +
Sbjct: 62  RASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVV 121

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ L+ G+ K G++ E LK++     +   P +  Y +LI+  C+  KL+EA +  + M
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            S SLVP V  Y SLV    + G   +A  L   +V +G  P+ 
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNV 222


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 183/361 (50%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F +  D C+ LE  G + ++ + N +I+   +  +    + +   +++    P+  T  T
Sbjct: 104 FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 163

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G++   V ++DR+    C P ++   S++  I +         +L++M  +N
Sbjct: 164 LINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN 223

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS I+ +  +   +++A+ +++EM  +G  ++   Y + +   C+ GK  +  
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M +  + P   TFN+L++   K  +++E+    ++M++R + P+   +N ++   
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +AN ML L +    SP+ +T++ LI GY     + + +K++  +  + +    
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ L+   CQ GK++ A++ F+ M SH ++P V  Y  L+    + G   KAL + E+
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463

Query: 364 M 364
           +
Sbjct: 464 L 464



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 178/357 (49%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G    ++++N++++ + +S    L + + + M E     +  T  T+I +LC+ G + 
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +   +  K     V+   SL+  + +  +  +G +LLK M+ + ++ + I +++++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              VK   L+ A  +Y+EM+ RG S N   Y T +  YC   ++ EAN ++  M      
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TF  LI+G    KR+++ +     +  R L+ +   ++ +++  C+ G  K A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  P+ +TY  L+ G    G++++ L+++ +++   +   +  YT++I  +C+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK+E+A   F  +    + P V  Y  ++    +KG+ ++A  L  +M  +G  P+
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 158/327 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  + + +E +G   S++++N+L+  + K+ + +    + + M+     PN  T   L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +    K G+LQ   ++   +  +  SP +I   +L+     + R+ E   +L  M+R   
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + ++ ++     ++ ++  + V+  + KRG  AN+  Y+  +  +C+ GKI+ A  
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L QEM + G+ P   T+ +L++G     ++E++L   E +   K+      +  +I  +C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  + A  +      KG  PN +TY+ +I G  K+G + E   L  +ME    +P   
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKS 331
            Y +LI +  + G L  + K  + MKS
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKS 571



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 153/310 (49%), Gaps = 4/310 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I+FN L+ V  K  +      +Y+ M+     PN  T  TL+   C   +L    +ML
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +   +CSP ++  TSLI      +R+++GM + + + ++ ++ + + YS++V    + 
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A  +++EM+  G   +   Y   +   C+ GK+E+A  + ++++ + +      +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +IEG  K  ++E++ +    +  + + P+   +  MI  LC+ G+  +AN +L    +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G +PN+ TY+ LI  + ++G++    KL  EM+    S    +   +I  L       E
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS----GE 592

Query: 322 ADKYFKIMKS 331
            DK F  M S
Sbjct: 593 LDKSFLDMLS 602



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 124/269 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           I + + ++ + L + M+R   +   + +S    A  + +     L   +++   G + N 
Sbjct: 64  IVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           +     I  +C   K   A  ++ ++   G +P   TFN LI G     ++ +++   ++
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDR 183

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P    +N ++  +C  G+   A  ML    ++    +  TYS +I    ++G 
Sbjct: 184 MVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           I   + L+ EME K I  ++  Y SL+  LC+ GK  +     K M S  +VP V  +  
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+ + +++G   +A  L +EM++ G+ P+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPN 332


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 2/343 (0%)

Query: 5   EVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI-R 62
           + A D+ R + +RG  + +  ++ T+I    K  R D   +++  ML       EA +  
Sbjct: 89  QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 148

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C  G+L T +   DR+  +  +  V     L+  +  + R  E   L++ M  K
Sbjct: 149 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 208

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++    K  N++ AL ++E M +RG  A    YT+ I A  + G+++E 
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 268

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  E    G++P    +N LI   + +  I+ +     +M  +++ P    +N ++R 
Sbjct: 269 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 328

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G   +A  ++     +G  P+ +TY+ LI GY+ +G++++ L++  EM  K  +PT
Sbjct: 329 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 388

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           L  Y +LI  LC+ G+ ++A+   K M  + + P    Y SL+
Sbjct: 389 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 159/327 (48%), Gaps = 2/327 (0%)

Query: 48  HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQE 106
            +L  +  PN  T  T+I+  C  G++Q  +D++  +  +   +P      ++I    + 
Sbjct: 62  ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 121

Query: 107 ERIEEGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
            R++E + +   ML K  +  + + Y+ ++        L++AL+  + M++RG +     
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   + A    G+  EA  L++EM   GL P   T+N+LI G  K   ++++L   E M 
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
            R +  +   +  +I  L + G  ++ + +   A+ +G  P+ + Y+ LI  ++  G I 
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 301

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              ++  EME K I+P    Y +L+  LC  G+++EA K    M    + P +  Y +L+
Sbjct: 302 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 361

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +  KG+   AL +  EM+++G  P+
Sbjct: 362 SGYSMKGDVKDALRIRNEMMNKGFNPT 388



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 163/357 (45%), Gaps = 2/357 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLD 82
           +++NT+I       R      I + M E     PN+ T  T+IS  CK G++   V + D
Sbjct: 73  VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 132

Query: 83  RIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +  K    P  ++  +LI     + +++  ++   RM+ + +      Y+L+V+A    
Sbjct: 133 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 192

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  + EEM  +G + + F Y   I  +C+ G +++A  + + M   G++    T+
Sbjct: 193 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 252

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI   +K  +++E+    ++ + R + P    +N +I      GN  +A  ++     
Sbjct: 253 TSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 312

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +P+++TY+ L+ G    G + E  KL  EM  + I P L  Y +LIS     G +++
Sbjct: 313 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 372

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A +    M +    P +  Y +L+    + G    A ++ +EMV  G+ P  S   S
Sbjct: 373 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 429



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 135/268 (50%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG ++++ ++N L+H +    R    + + + M      P+  T   LI+  CK G ++
Sbjct: 172 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 231

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++ + +  +     V+  TSLI  + ++ +++E   L    +R+ +  D + Y+ ++
Sbjct: 232 KALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 291

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +     N++ A  +  EM K+  + +   Y T +   C  G+++EA  L+ EM   G++
Sbjct: 292 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 351

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G +    ++++L    +MM++   P+   +N +I+ LC+ G    A  M
Sbjct: 352 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 411

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGE 283
           +   ++ G +P++ TY  LI G   E E
Sbjct: 412 VKEMVENGITPDDSTYISLIEGLTTEDE 439



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 107/237 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  +G +  + ++N LI+   K         I+++M          T  +LI 
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 257

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL K GQ+Q    + D    +   P +++  +LI        I+    ++  M +K +  
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  ++ A  + +EM KRG   +   Y T I  Y   G +++A  + 
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 377

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            EM N G  P   T+N LI+G  K  + +++ +  ++M+   + P  S +  +I  L
Sbjct: 378 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 7/148 (4%)

Query: 225 MSRKLLPSCSA-FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M R  LP C+  FN M+R LC  G   +A   L L L +   PN +TY+ +I G+   G 
Sbjct: 32  MFRLRLPLCTTTFNIMLRHLCSAGKPARA---LEL-LRQMPRPNAVTYNTVIAGFCSRGR 87

Query: 284 IQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIY 341
           +Q  L +  EM E   I+P    Y ++IS  C+ G+++EA K F  M +   V P   +Y
Sbjct: 88  VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 147

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +L+G + ++G    AL   + MV  G+
Sbjct: 148 NALIGGYCDQGKLDTALLYRDRMVERGV 175


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 172/358 (48%), Gaps = 35/358 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+    ++ +G    + + N ++ +  KS+R +  W +Y  M       +  T   +I+
Sbjct: 140 AFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMIN 199

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L+   + +  +      P V+                                
Sbjct: 200 VLCKEGKLKKAKEFIGLMEALGIKPNVV-------------------------------- 227

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ I++       +E A ++++ M  RG   +S+ Y +FI   C+ GK+EEA+ ++
Sbjct: 228 ---TYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGML 284

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M+  GL+P   T+N LI+G      +E +  Y ++M+   L+P+ S +N +I  L   
Sbjct: 285 EKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLD 344

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A+G++    +KG  P+ +TY+ LI GY + G +++   L+ EM  K I PT   Y
Sbjct: 345 CKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTY 404

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           TSLI  L + G++++AD  F+ +    + P + ++ +L+  H   GN  +A  + +EM
Sbjct: 405 TSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEM 462



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 162/329 (49%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG      ++ + I  + K  + +    + + M E    P   T  TLI   C  G L+ 
Sbjct: 255 RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEM 314

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D  D++  +   P V     LI  +  + +++E   ++K M  K ++ D++ Y++++ 
Sbjct: 315 AFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILIN 374

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +  N++ A  +++EM+ +G       YT+ I    + G++++A+ L +++   G+ P
Sbjct: 375 GYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP 434

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               FN LI+G      ++ + +  ++M   K++P    FN +++  C  G  + A  ++
Sbjct: 435 DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELI 494

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G  P+ I+Y+ LI GY+K G++++  ++  EM     +PTL  Y +LI  LC+ 
Sbjct: 495 EEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKN 554

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            + + A++  K M S  + P  + Y SL+
Sbjct: 555 EEGDHAEQLLKEMISKGITPNDNTYLSLI 583



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 136/274 (49%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E+AFD    + + G   ++ ++N LIH +    + D    I + M E    P+  T   
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  C+ G ++    + D +  K   P  +  TSLI  + +  R+++   L ++++RK 
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D I ++ ++       N++ A  + +EM +     +   + T +   C  GK+E A 
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAR 491

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM++ G+KP   ++N LI G +K   ++++    ++M+S    P+   +N +I+ L
Sbjct: 492 ELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGL 551

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           C+      A  +L   + KG +PN+ TY  LI G
Sbjct: 552 CKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 115/234 (49%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K    E A V+Y EM +    ++   +   I   C+ GK+++A   +  ME  G+KP  
Sbjct: 167 LKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNV 226

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N +I G     R+E +    + M  R + P    +   I  +C+ G  ++A+GML  
Sbjct: 227 VTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEK 286

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
             + G  P  +TY+ LI GY  +G ++       +M  + + PT+  Y  LI +L    K
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK 346

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++EAD   K M    LVP    Y  L+  +   GN  KA  L +EM+S+G++P+
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPT 400



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 134/309 (43%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A C+  +     +  D + GK   P V     ++   ++  R E+  VL   M R  
Sbjct: 127 LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMR 186

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + +++++    K   L+ A      M   G   N   Y T I  YC  G++E A 
Sbjct: 187 IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGAR 246

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M+  G+KP   T+   I G  K  ++EE+    E+M    L P+   +N +I   
Sbjct: 247 MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  GN + A       + +G  P   TY+ LI     + ++ E   +  EM  K + P  
Sbjct: 307 CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI+  C+CG +++A      M S  + P    Y SL+ +  ++G   +A  L E+
Sbjct: 367 VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426

Query: 364 MVSEGLKPS 372
           +V +G+ P 
Sbjct: 427 IVRKGIFPD 435



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 101/210 (48%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           +Y   I A CE  + ++A      M+  G+ P+    N ++    K+ R E++     +M
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
              ++  S   FN MI  LC+ G  K+A   + L    G  PN +TY+ +I GY   G +
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV 242

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           +    ++  M+ + + P    Y S IS +C+ GKLEEA    + MK   L P    Y +L
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +  +  KGN   A    ++MV EGL P+ S
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVS 332


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 167/348 (47%), Gaps = 12/348 (3%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R  S  +++F+ LI+ + K  +      +Y  ML     PN  T  ++I    K 
Sbjct: 307 REMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQ 366

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            +L     M   +  K CSP VI  + LI      +R+++GM LL  M R+ ++ +TI Y
Sbjct: 367 NRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITY 426

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +++   ++ NL +AL + +EM+  G   N     T +   C  GK+++A  + + M+ 
Sbjct: 427 TTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQK 486

Query: 192 A-----------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +            ++P  +T+N+LI G     +  E+    E+M  R L+P    +N +I
Sbjct: 487 SKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVI 546

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+     +A  M      KGFSP+ +T++ LI GY K G + + L+++ EM  + I 
Sbjct: 547 DGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIV 606

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGI 347
                Y +LI   CQ G +  A   F+ M S  + P  + I   L G+
Sbjct: 607 ANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 11/371 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++G S +L ++N +I+    S R     R+ + M E    P+  T   LI+AL K G+
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                ++ + +  +   P  I   S+I    ++ R++    +   M  K    D I +S+
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++      + ++  + +  EM +RG  AN+  YTT I  +C+ G +  A  L+QEM ++G
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL-----------PSCSAFNEMIRR 242
           + P   T N L++G     +++++L   + M   K+            P    +N +I  
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICG 513

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L   G   +A  +      +G  P+ ITY+ +I G  K+  + E  +++  M  K  SP 
Sbjct: 514 LINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPD 573

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  +T+LI+  C+ G++ +  + F  M    +V     Y +L+    + GN   AL + +
Sbjct: 574 VVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQ 633

Query: 363 EMVSEGLKPST 373
           EM+S G+ P T
Sbjct: 634 EMISSGVYPDT 644



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 168/369 (45%), Gaps = 5/369 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +V   + R +E R    ++ SF  LI       +       +  + +   +P+  T  TL
Sbjct: 93  DVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTL 152

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LC   ++   +    +I    C P VI  T+L+  + +E R+ E + LL RM+   +
Sbjct: 153 LHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGL 208

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FSANSFVYTTFIGAYCEYGKIEEAN 183
             + I Y  IV    KM +  SAL +  +M +      N  +Y+  I    + G+  +A 
Sbjct: 209 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQ 268

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM+  G+ P   T+N +I G   + R  E+     +M  RK+ P    F+ +I  L
Sbjct: 269 NLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINAL 328

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G   +A  +    L +G  PN ITY+ +I G++K+  +    +++Y M  K  SP +
Sbjct: 329 VKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDV 388

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             ++ LI   C   ++++  K    M    LV     Y +L+    + GN   AL L +E
Sbjct: 389 ITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQE 448

Query: 364 MVSEGLKPS 372
           M+S G+ P+
Sbjct: 449 MISSGVCPN 457



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/398 (23%), Positives = 177/398 (44%), Gaps = 47/398 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I+F TL++ + +  R      +   M+E+   PN+ T  T++  +CK G   + +++L
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235

Query: 82  DRIHG-KRCSPMVIVNTSLILRI---------------IQEE------------------ 107
            ++    R  P V++ +++I  +               +QE+                  
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS 295

Query: 108 --RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
             R  E   LL+ M  + M  D + +S+++ A VK      A  +Y EML RG   N+  
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTIT 355

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y + I  + +  +++ A  +   M   G  P   TF++LI+G   AKR+++ +    +M 
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMS 415

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
            R L+ +   +  +I   C+ GN   A  +L   +  G  PN +T + L+ G    G+++
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLK 475

Query: 286 EVLKLYYEME-----------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           + L+++  M+           +  + P +  Y  LI  L   GK  EA++ ++ M    L
Sbjct: 476 DALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGL 535

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           VP    Y S++    ++    +A  + + M S+G  P 
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPD 573



 Score =  120 bits (302), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 168/369 (45%), Gaps = 7/369 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLI 65
           A D+  Y+ +      +I F  L+ VV + +R D+V  +++ M E  R P N  +   LI
Sbjct: 60  AIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKM-EMRRIPCNIYSFTILI 118

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C   +L   +    +I      P ++  ++L+  +  E+R+ E +    ++ + N+I
Sbjct: 119 KCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVI 178

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
               A++ ++    +   +  A+ + + M++ G   N   Y T +   C+ G    A  L
Sbjct: 179 ----AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 234

Query: 186 MQEMENAG-LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ME    +KP    ++ +I+G  K  R  ++ +   +M  + + P+   +N MI   C
Sbjct: 235 LRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFC 294

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A  +L    ++  SP+ +T+S LI    KEG+  E  +LY EM  + I P   
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y S+I    +  +L+ A++ F +M +    P V  +  L+  +         + L  EM
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414

Query: 365 VSEGLKPST 373
              GL  +T
Sbjct: 415 SRRGLVANT 423



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 5/265 (1%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ + L   M+R   +   I +  ++   V+M   +  + ++ +M  R    N + +T 
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C   K+  A     ++   G  P   TF+ L+ G     R+ E+L +  Q+    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK-- 174

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+  AF  ++  LC  G   +A  +L   ++ G  PN+ITY  ++ G  K G+    L
Sbjct: 175 --PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 289 KLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            L  +ME  S I P +  Y+++I  L + G+  +A   F  M+   + P +  Y  ++  
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPS 372
               G  ++A  L  EM    + P 
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPD 317



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 11/287 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S  +I+F+ LI     + R D   ++   M       N  T  TLI   C+ G 
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGN 438

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI-------- 125
           L   +D+L  +      P V+   +L+  +    ++++ + + K M +  M         
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498

Query: 126 ---HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D   Y++++   +       A  +YEEM  RG   ++  Y + I   C+  +++EA
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +   M + G  P   TF  LI G  K  R+ + L    +M  R ++ +   +  +I  
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            C+ GN   A  +    +  G  P+ IT  +++ G   + E++  ++
Sbjct: 619 FCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 179/366 (48%), Gaps = 1/366 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E ++ V   +   G +  + +FN ++    +S+  +    +YQHM+E+   P+  +   L
Sbjct: 27  EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 86

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K G+L   + +L  +  +  +P +   +SL+  + +  R++    L   M+R   
Sbjct: 87  IHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGH 146

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + +  ++    +   ++ A   +++M K G   N  VY   +   C  G++E+AN 
Sbjct: 147 HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT 206

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM++    P   T+N L++   KA+R+EE     E M +   +P+   F+ +I  LC
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  ++A  +    L+ G  PN+ TY+ LI G  +  ++ +  +L+ +M    I P   
Sbjct: 267 RTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAV 326

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHS-LVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
           AY SLI+  C+ G ++EA+K ++ M   + L P +  + +L+    + G   +A  L  E
Sbjct: 327 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 386

Query: 364 MVSEGL 369
           M ++GL
Sbjct: 387 MGTKGL 392



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 1/357 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG + S+ ++++L+  + K+ R D    ++  M+    +P+      LI  LC+ G+++ 
Sbjct: 109 RGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKD 168

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             +   ++    C P V V   L+  +    ++E+   L   M   +   D + Y+ ++ 
Sbjct: 169 ASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLD 228

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K R +E    ++E M   G+  N   ++T I   C  G++E+A  +   M  AG KP
Sbjct: 229 AVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKP 288

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  LI G  +A+++ ++    E+M    + P   A+N +I   C+ G+  +A  + 
Sbjct: 289 NKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 348

Query: 257 T-LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             ++   G  P  +T++ LI G+ K G++    +L  EM  K ++     Y  LI+ L +
Sbjct: 349 REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSR 408

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             KL+EA + +K M+    +       S VG   + GN  +A  + E     G  P+
Sbjct: 409 ATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 1/300 (0%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           ++ M ++   PN      L+  LC  GQL+    +   +    CSP V+   +L+  + +
Sbjct: 173 FKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK 232

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
             R+EEG  L + M     + + I +S +++   +   LE AL V+  ML+ G   N + 
Sbjct: 233 ARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQM 224
           YTT I   C   K+ +A  L ++M  A + P    +N LI G C +    E    Y E  
Sbjct: 293 YTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
               L P+   FN +I   C+ G   +AN ++     KG + +  TY  LI G ++  ++
Sbjct: 353 GGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL 412

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            E L++Y +M  K       +  S +  LC+ G +++A   F+  +    VP  + +  L
Sbjct: 413 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 143/286 (50%)

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           K  +  V   +S+I  +++E + EE   +L+ M+      D  A++ ++    +  N+E 
Sbjct: 4   KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A  VY+ M++ G+  ++  Y   I    + GK++E+  ++ EM   G  P  + ++ L+ 
Sbjct: 64  AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
             AKA+R++ + S  ++M+     P    F E+I  LC+ G  K A+         G  P
Sbjct: 124 ALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQP 183

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N   Y+ L+ G    G++++   L+ EM+  S SP +  Y +L+ ++C+  ++EE  K F
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF 243

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + M++   VP V  + +L+      G   KAL +   M+  G KP+
Sbjct: 244 EAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPN 289



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 125/254 (49%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M  KN+  +   YS I+ + VK    E +  V EEM+  G + + F +   +  +     
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +E+A  + Q M  +G KP + ++++LI G AK  +++ESL    +M+ R   PS  A++ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++R L +      A+ +    +  G  P+ + +  LI G  + G++++  + + +M    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P +P Y  L+  LC  G+LE+A+  F  MKSHS  P V  Y +L+    +     +  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 359 HLCEEMVSEGLKPS 372
            L E M + G  P+
Sbjct: 241 KLFEAMRAAGYVPN 254



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 7/285 (2%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S  ++++NTL+  V K+ R +   ++++ M      PN  T  TLI  LC+ G+L+  ++
Sbjct: 217 SPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 276

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +   +    C P     T+LI  + + E++ +   L ++M +  +  D +AY+ ++    
Sbjct: 277 VFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC 336

Query: 140 KMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           K  +++ A  +Y EM    G       + T I  +C+ GK+  AN L+ EM   GL    
Sbjct: 337 KRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADS 396

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL--P-SCSAFNEMIRRLCECGNAKQANGM 255
            T+ +LI G ++A +++E+L   +QM  +K L  P SC +F   +  LC+ GN  QA  +
Sbjct: 397 CTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF---VGGLCKTGNIDQAYAV 453

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                  G  PN  T+  L     K G +++  KL    + + I+
Sbjct: 454 FEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 498



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 143/317 (45%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N  T  ++I +L K  + +    +L+ +    C+P V     ++    +   +E+   + 
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           + M+      D ++Y ++++   K+  L+ +L +  EM+ RG + +   Y++ + A  + 
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
            +++ A+ L  EM   G  P    F  LI G  +A +++++    +QM      P+   +
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N ++  LC  G  +QAN +         SP+ +TY+ L+    K   ++E  KL+  M  
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
               P +  +++LI  LC+ G+LE+A + F  M      P    Y +L+          +
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 357 ALHLCEEMVSEGLKPST 373
           A  L E+M    + P  
Sbjct: 309 ARELFEKMTQACIPPDA 325


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 160/310 (51%), Gaps = 2/310 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   LIS LC    LQ   ++LD++      P V +  +LI   +QE R E  + L
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           LK M+   ++ D   Y+ ++    + + +E A ++  +M ++G   N+  Y  FI  Y +
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+I+ A    ++M ++G+ P +  + +LI+G        E+LS  + M+ + L+P   A
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++ +I  L + G  K+A G+    L  G  P+   Y+ LI G+ KEG+I++  +LY EM 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 296 YKSISPTLPAYTSLISS--LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           +  I+P +  Y +LI+    C+ G L EA K F  M S  + P   IY  L+    ++GN
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 748

Query: 354 KAKALHLCEE 363
             KAL L  E
Sbjct: 749 LEKALSLFHE 758



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 180/425 (42%), Gaps = 71/425 (16%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +LI  N L+  + K++   L W++Y  M+E    P+  T   +I A CK G +   
Sbjct: 202 GFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG 261

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  K C P +    + I  + Q   ++E + + K M+ K +  D   Y+L+V  
Sbjct: 262 KMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320

Query: 138 KVKMR-----------------------------------NLESALVVYEEMLKRGFSAN 162
             K +                                   N+E AL + +EM+ RG   N
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y   IG   + G++ +A  L  EM  AG++P   T+NLLI+G  K+  + ++     
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLA 440

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M +RKL PS   ++ +I  LC   + ++AN +L   +  G  PN   Y  LI  Y +E 
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE--------------------- 321
             +  ++L   M    + P L  Y  LI  LC+  K+EE                     
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560

Query: 322 --------------ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
                         A++YFK M S  +VP   IY  L+  H + GN  +AL   + M+ +
Sbjct: 561 AFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK 620

Query: 368 GLKPS 372
           GL P 
Sbjct: 621 GLIPD 625



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 176/361 (48%), Gaps = 11/361 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           ++G   +  ++   I++ +KS    +  R ++ ML +   PN      LI   C  G   
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608

Query: 74  --LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             L T+  ML+    K   P +   +++I  + +  + +E M +  + L+  ++ D   Y
Sbjct: 609 EALSTFKCMLE----KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLY 664

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG--AYCEYGKIEEANCLMQEM 189
           + ++    K  ++E A  +Y+EML  G + N  VY T I    YC+ G + EA  L  EM
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEM 724

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            + G+ P    + +LI+GC K   +E++LS   +   +K + S SAFN +I   C+ G  
Sbjct: 725 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKV 783

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +    +DK  +PN +TY+ LI  Y K   ++E  +L+ +ME ++I P    YTSL
Sbjct: 784 IEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 843

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + S  Q G   +    FK M++  +      Y  +   + ++G   +AL L  + + EG+
Sbjct: 844 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 903

Query: 370 K 370
           K
Sbjct: 904 K 904



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 172/363 (47%), Gaps = 2/363 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  L+++++N +I  + K+        ++  ML     P+  T   LI    K   +  
Sbjct: 375 RGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAK 434

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             ++L  +  ++ +P     + LI  +     +++   +L +M+R  +  +   Y  ++ 
Sbjct: 435 ACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIK 494

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A V+    E A+ + + M+  G   + F Y   I   C   K+EEA  L+ +M   G+KP
Sbjct: 495 AYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+   I   +K+  I+ +  Y + M+S  ++P+   +  +I+  C+ GN  +A    
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L+KG  P+   YS +I   +K G+ +E + ++ +     + P +  Y SLIS  C+ 
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKE 674

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGI--HLEKGNKAKALHLCEEMVSEGLKPSTS 374
           G +E+A + +  M  + + P + +Y +L+    + + GN  +A  L +EM+S+G+ P   
Sbjct: 675 GDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGY 734

Query: 375 YLC 377
             C
Sbjct: 735 IYC 737



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 162/367 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V + + ++G      ++  L+    K  R+     I++ M  +   PN  T   LI 
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALID 354

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G ++  + + D +  +     V+   ++I  I +   + + M L   ML   +  
Sbjct: 355 GFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEP 414

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT  Y+L++   +K  ++  A  +  EM  R  + + F Y+  I   C    +++AN ++
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   G+KP    +  LI+   +  R E ++   + M++  +LP    +N +I  LC  
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A  +L    +KG  PN  TY   I  Y+K GEIQ   + + +M    I P    Y
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY 594

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI   C  G   EA   FK M    L+P +  Y +++    + G   +A+ +  + + 
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654

Query: 367 EGLKPST 373
            G+ P  
Sbjct: 655 TGVVPDV 661



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 155/358 (43%), Gaps = 38/358 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G    + +++ +IH ++K+ +      ++   L+    P+     +LIS  CK G ++
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLI--LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + D +     +P ++V  +LI      +   + E   L   M+ K +  D   Y +
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 738

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  NLE AL ++ E  ++   + S  + + I ++C++GK+ EA  L  +M +  
Sbjct: 739 LIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKK 797

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-------------------- 233
           L P   T+ +LI+   KA+ +EE+      M +R ++P+                     
Sbjct: 798 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 857

Query: 234 SAFNEMIRR---------------LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S F +M  R                C+ G + +A  +L  +L +G    +  +  LI   
Sbjct: 858 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 917

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            KE +I  VL+L  EM  + +S +     +L+    + G  +EA K   +M+    VP
Sbjct: 918 CKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           +   +LI + CK G++    ++ D +  K+ +P ++  T LI    + E +EE   L   
Sbjct: 768 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 827

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M  +N+I +T+ Y+ ++ +  ++ N    + ++++M  RG + ++  Y     AYC+ GK
Sbjct: 828 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 887

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
             EA  L+ +    G+K  D+ F+ LI    K K+I   L    +M   +L  S    N 
Sbjct: 888 SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNT 947

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI--GGYAKEGEIQEVL 288
           ++    + GN  +A+ +L +    G+ P  ++ +  I  G    + +I +VL
Sbjct: 948 LLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMKSDISQVL 999



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 36/224 (16%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           VY  M++     + + YT  I A+C+ G + +   ++ EME                   
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME------------------- 269

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
                            ++  P+   +N  I  LC+ G   +A  +  L ++KG  P+  
Sbjct: 270 -----------------KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGH 312

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ L+ G+ K+   +E   ++  M    ++P    YT+LI    + G +EEA +    M
Sbjct: 313 TYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM 372

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  L   V  Y +++G   + G  AKA+ L  EM+  G++P T
Sbjct: 373 ITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416



 Score = 41.2 bits (95), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 1/139 (0%)

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           + F+  I +    G   +A+ +   ++ +GF P  I  ++L+    K   +    K+Y  
Sbjct: 173 TVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGS 232

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    I P +  YT++I + C+ G + +       M+     P +  Y + +G   + G 
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGA 291

Query: 354 KAKALHLCEEMVSEGLKPS 372
             +AL + + M+ +GL P 
Sbjct: 292 VDEALEVKKLMMEKGLGPD 310


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 176/357 (49%), Gaps = 4/357 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF L  + + TLIH + K         + + +  N+  PN     T+I  +CK   +   
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+   +  K  SP V+  ++LI       ++++ + L  +M+ +N+  D   ++++V  
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++    V+  M+K+G   N   Y + +  YC   ++ +A  ++  M   G+ P 
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            +++N+LI+G  K K+++E+++  ++M  + ++P    +N +I  LC+ G    A  ++ 
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVD 396

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+G  P+ ITYS ++    K  ++ + + L  +++ + I P +  YT LI  LC+ G
Sbjct: 397 EMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGG 456

Query: 318 KLEEADKYFK--IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +LE+A   F+  ++K +++   V+ Y  ++     KG   +AL L  +M      P 
Sbjct: 457 RLEDAHNIFEDLLVKGYNIT--VNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPD 511



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 177/396 (44%), Gaps = 18/396 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIR----------- 54
           AF +   L ++  +   I FN ++  + KS     V  + Q M  E I            
Sbjct: 60  AFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQ 119

Query: 55  ----YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE 110
               +PN  T  TLI  LC  GQ+   +   D +         +   +LI  + +     
Sbjct: 120 LMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETR 179

Query: 111 EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI 170
             + LL+R+    +  + + YS I+    K +++  A  +Y EM+ +G S N   Y+  I
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239

Query: 171 GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             +   G++++A  L  +M    +KP   TFN+L++G  K  +++E  +    MM + + 
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P+   +  ++   C      +A  +L     +G +P+  +Y+ LI G+ K  ++ E + L
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           + EM +K I P +  Y SLI  LC+ GK+  A K    M    + P +  Y S++    +
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 419

Query: 351 KGNKAKALHLCEEMVSEGLKPS--TSYLCSASTCRG 384
                KA+ L  ++  +G++P+  T  +     C+G
Sbjct: 420 NHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKG 455


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 169/362 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ R  +  ++SF+ LI + ++    D      + M      P+      +I   C+ G 
Sbjct: 288 MQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + + D + G  C P V+   +L+  + ++ R+ +   LL  M  + +  D   ++ 
Sbjct: 348 MSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTT 407

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   +  N E+AL +++ +L++    +   Y + I   C  G + +AN L  +M    
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+++LI+   +  ++E++  + ++M+ +  LP+   +N +I+  C  GN K+  
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQ 527

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             L         P+ IT++ LI GY KE  +     ++  ME + + P    Y  +I+  
Sbjct: 528 QFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGF 587

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G +++A + FK M    + P    Y SL+  H+  GN  +A  L +EM+  G  P  
Sbjct: 588 SEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647

Query: 374 SY 375
            +
Sbjct: 648 KF 649



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 170/348 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           + N ++H   K+   D    +   M +   +P+  T   LI A  + G +   + ++D +
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P ++   S++  + +  R ++   + + M + ++  D  ++++++    ++  +
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A+  Y+EM  R  + +   ++  IG +   G+++ A   ++EM+  GL P    + ++
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  +A  + E+L   ++M+    LP    +N ++  LC+      A  +L    ++G 
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+  T++ LI GY ++G  +  L+L+  +  + + P +  Y SLI  +C+ G L +A++
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  M +  ++P    Y  L+  H EKG    A    +EMV +G  P+
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPN 506



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 174/369 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  +   +  RG    ++++N+++  + K  R D    +++ M +    P+  +   L
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNIL 268

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G+++  V     +  +  +P V+  + LI    +   ++     L+ M    +
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL 328

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + Y++++    +  ++  AL V +EM+  G   +   Y T +   C+  ++ +A  
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EME  G+ P   TF  LI G  +    E +L   + ++ ++L P    +N +I  +C
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+  +AN +      +   PN ITYS LI  + ++G++++      EM  K   P + 
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y S+I   C+ G +++  ++ + M+  ++ P +  + +L+  ++++ N   A ++   M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIM 568

Query: 365 VSEGLKPST 373
             E ++P  
Sbjct: 569 EKEMVRPDA 577



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 36/218 (16%)

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG-------- 247
           P  + F+LLI    ++++  E+      ++  ++    SA N ++  L   G        
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 248 -----------NAKQANGML-----TLALDKGFS-----------PNEITYSHLIGGYAK 280
                      NA   N M+     TL  D   +           P+ +T++ LI    +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G++   + L   M  + + P +  Y S++  LC+  + ++A + F+ M   S+ P V  
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYLC 377
           +  L+G     G   +A+   +EM    + P   S+ C
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSC 302



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/159 (18%), Positives = 68/159 (42%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF     + ++G   ++ ++N++I    +S       +  Q M ++  +P+  T  TL
Sbjct: 489 EDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTL 548

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I    K   +    ++ + +  +   P  +    +I    ++  +++   + K M    +
Sbjct: 549 IHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGI 608

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
             D   Y  ++   V   N + A  +++EM+ RGF+ + 
Sbjct: 609 EPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 167/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   +++++N++I  + K+   D    +   M++N   PN  T  +++   C  GQ +
Sbjct: 227 DRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++H     P V+   SL+  + +  R  E   +   M ++ +  +   Y  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   N +V++  I AY + GK+++A  +  +M   GL 
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  +I    K+ R+E+++ Y EQM+  +L P    +N +I  LC      +A  +
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   + I ++ +I  + KEG + E  KL+  M    + P +  Y++LI   C 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCL 526

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA K    M S  + P    Y +L+  + +      AL L  EM S G+ P 
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 189/382 (49%), Gaps = 11/382 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M +    PN  +  
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166

Query: 63  TLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            L+  LC   + Q  +++L  +   G  C P V+  T++I    +E  +++       ML
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + ++ + + Y+ I+ A  K + ++ A+ V   M+K G   N   Y + +  YC  G+ +
Sbjct: 227 DRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA   +++M + G++P   T+N L++   K  R  E+    + M  R L P  + +  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +     G   + +G+L L +  G  PN   +S LI  YAK+G++ + + ++ +M  + ++
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGNKAK 356
           P    Y ++I  LC+ G++E+A +YF+ M    L PG  +Y SL  IH     +K +KAK
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL--IHSLCIFDKWDKAK 464

Query: 357 ALHLCEEMVSEGLKPSTSYLCS 378
            L L  EM+  G+   T +  S
Sbjct: 465 ELIL--EMLDRGICLDTIFFNS 484



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 155/327 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+ LI    K  + D    ++  M +    P+  T  T+I  LCK G+++  +   +++ 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +R SP  IV  SLI  +   ++ ++   L+  ML + +  DTI ++ I+ +  K   + 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   N   Y+T I  YC  GK++EA  L+  M + G+KP   T+N LI
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+E++L    +M S  + P    +N +++ L +      A  +     + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKG 352
           F  + ++ LVP V  Y  +    +E+G
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 148/320 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G    ++++N+L+  + K+ R     +++  M +    P   T  TL+ 
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V + LI    ++ ++++ M++  +M ++ +  
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT+ Y  ++    K   +E A+  +E+M+    S  + VY + I + C + K ++A  L+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I+   K  R+ ES    + M+   + P+   ++ +I   C  
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLA 527

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L   +  G  P+ +TY+ LI GY K   +++ L L+ EME   +SP +  Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 307 TSLISSLCQCGKLEEADKYF 326
             ++  L Q  +   A + +
Sbjct: 588 NIILQGLFQTRRTAAAKELY 607



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 158/359 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++ TL+           +  +   M+ N  +PN      LI A  K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +  ++  +  +P  +   ++I  + +  R+E+ M   ++M+ + +    I Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++++       + A  +  EML RG   ++  + + I ++C+ G++ E+  L   M   G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T++ LI+G   A +++E+      M+S  + P C  +N +I   C+    + A 
Sbjct: 510 VKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G SP+ ITY+ ++ G  +        +LY  +        L  Y  ++  L
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+    +EA + F+ +    L      +  ++G  L+ G   +A  L   + + GL P 
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 10/331 (3%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  RY EQ      S   I +N+LIH +   D+ D    +   ML+     +     ++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P +I  ++LI       +++E   LL  M+  
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVK---PNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            M  D + Y+ ++    K+  +E ALV++ EM   G S +   Y   +    +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  P+  TYS +     ++G ++E+  L+  ME    +  
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 303 LPAYTSLISSLCQCGKLEEADKY-FKIMKSH 332
                S++  L Q G +  A  Y F I + H
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 3/312 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  L  I FN++I    K  R     +++  M+     PN  T  TLI   C  G++ 
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMD 531

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L  +      P  +   +LI    +  R+E+ +VL + M    +  D I Y++I+
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               + R   +A  +Y  + + G       Y   +   C+    +EA  + Q +    L+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               TFN++I    K  R +E+      + +  L+P    ++ M   L E G  ++ + +
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT-SLISSLC 314
                + G + N    + ++    + G+I       + ++ K  S  L A T SL   L 
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS--LEASTASLFLDLL 769

Query: 315 QCGKLEEADKYF 326
             GK +E  ++ 
Sbjct: 770 SGGKYQEYHRFL 781


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 190/408 (46%), Gaps = 37/408 (9%)

Query: 2    RLFEVAFDVCRYLEQRGF-SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
            R  + A ++ + +E+ G     + +++T++  + KS + D   R+ + M+     PN  T
Sbjct: 926  RKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVT 985

Query: 61   IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +L+  LCK G+L     +L R+    CSP ++   ++I    +  RI+E   LL+ M+
Sbjct: 986  YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV 1045

Query: 121  RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                  + + Y++++ A  K    E A+ + E M+++G+  N F Y + +  +C+  ++E
Sbjct: 1046 DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVE 1105

Query: 181  EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
             A  L+  M   G  P   ++N +I G  KA ++ E +   EQM+S   +P    FN +I
Sbjct: 1106 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTII 1165

Query: 241  RRLC---------ECGNAKQANG---------------------------MLTLALDKGF 264
              +C         E  N  Q +G                           +  +   +G 
Sbjct: 1166 DAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGC 1225

Query: 265  SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            SP+ ITY+ +I G  K   +    KL+ +M    ++P    Y+ +ISSLC+   ++EA+ 
Sbjct: 1226 SPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANN 1285

Query: 325  YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              ++M  +   PG   Y +L+    + GN  KAL + + ++S+G  P 
Sbjct: 1286 VLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 1333



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 177/361 (49%), Gaps = 4/361 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + +RG+  + I++N ++HV  + +  +   ++ Q M++    P+     T+IS
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+L+   D+L+++  + C P V   ++LI  + +   I+    LL+  +  +   
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP 473

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +AYS++++A  K + L  A    + M+K     +   Y + +   C+  +I +A  L 
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLF 533

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M  AG+ P   T++++I    K   ++ +    E+M   K +P    ++ +I  LC+ 
Sbjct: 534 DRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKA 593

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +    L  G +PN +TY+ LI G  K  ++++  ++   M  +S +P    Y
Sbjct: 594 GTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITY 653

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI+ LC   +LEEA +  + MK    +P    Y +L    L    K   L L E+++ 
Sbjct: 654 TCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTL----LRALQKTNNLELVEQLLK 709

Query: 367 E 367
           E
Sbjct: 710 E 710



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 166/331 (50%), Gaps = 3/331 (0%)

Query: 16   QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            Q G++    + N L+  + +  R     ++Y++ L     PN  T   LI  LC+ G + 
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKL--CCSPNMFTFTILIHGLCRAGDIG 894

Query: 76   TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLI 134
            T  ++L  +        VI++  +I  +    +++  + L K M        D   YS I
Sbjct: 895  TAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954

Query: 135  VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
            V + VK   ++ A  + E+M+ +G S N   Y++ +   C+ GK++EA  L+Q M  +G 
Sbjct: 955  VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014

Query: 195  KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
             P   T+N +I+G  K  RI+E+    E+M+     P+   +  ++   C+CG A+ A G
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074

Query: 255  MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
            ++ + ++KG+ PN  TY+ L+  + K+ E++   +L   M  K   P + +Y ++I+ LC
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134

Query: 315  QCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +  K+ E     + M S++ VP +  + +++
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTII 1165



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 177/367 (48%), Gaps = 3/367 (0%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  R LE+    GF+ ++ S+NT++H   K++R +    + + M+     P+  +  T+I
Sbjct: 248 DAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVI 307

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK  Q+     ++D++  + C P VI   +L+    +   ++  + L+++M  +   
Sbjct: 308 NGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYR 367

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + I Y+ I++   +  ++E A  V + M++ G   ++  Y+T I  +C+ GK+ EA+ L
Sbjct: 368 PNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDL 427

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++M   G +P     + LI+   KA  I+ +       +     P   A++ +I  LC+
Sbjct: 428 LEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCK 487

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A   L + +     P+ +TY+ ++ G  K   I +   L+  M    + P +  
Sbjct: 488 AKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVT 547

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y+ +I S C+   L+ A K  + MK    VP V  Y +L+    + G   KA  + +EM+
Sbjct: 548 YSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML 607

Query: 366 SEGLKPS 372
             G  P+
Sbjct: 608 GCGCAPN 614



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 185/380 (48%), Gaps = 23/380 (6%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
             +++FNT+I  + K+ R D+ + ++  + E+   PN  T  +L+  LCK  +      +L
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 1216

Query: 82   DRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
              +  K+ CSP +I   ++I  + + +R++    L  +ML   +  D + YS+++ +  K
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276

Query: 141  MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             R ++ A  V E MLK GF   +  Y T I  +C+ G +++A  ++Q + + G  P   T
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336

Query: 201  FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            F++ I+  +K  R+ ++    E M+   L+P    +N +++  C+    + A  +  +  
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMR 1396

Query: 261  DKGFSPNEITYSHLIGGYAKEGEIQEVL------------KLYYEMEYK-----SISPTL 303
              G  P+  TY+ L+G    +   +++L            KL +E+  K      +   +
Sbjct: 1397 QCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADV 1456

Query: 304  PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
                +++    +CG  ++A K F+ M   ++V    ++ +++G+++    + +A  L   
Sbjct: 1457 RLGCAIVDMFGKCGSPQDARKVFEGMDQRNVV----LWSAMLGVYVFHKQEEQAFGLWRV 1512

Query: 364  MVSEGLKP-STSYLCSASTC 382
            M  EG++P + ++L   + C
Sbjct: 1513 MGLEGVEPDAVTFLSLLTMC 1532



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 170/397 (42%), Gaps = 38/397 (9%)

Query: 14  LEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           LEQ   RG    ++S+ T+I+ + K D+ D   R+   M++    PN  T  TL+   C+
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G L   V+++ ++  +   P  I   +++    +   +E    +L+ M++     D I 
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           YS I+    K   L  A  + E+M++RG   +    +T I A C+   I+ A  L++   
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG--- 247
                P    +++LI    KAKR+ E+ S+ + M+  +  P    +N ++  LC+     
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527

Query: 248 ------NAKQANGMLTLA---------------LDKGFS-----------PNEITYSHLI 275
                 +  +A G++                  LD  F            P+ +TYS LI
Sbjct: 528 DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALI 587

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  K G + +   ++ EM     +P L  Y +LI  LC+  K+E+A +  +IM+  S  
Sbjct: 588 NGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT 647

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           P    Y  L+          +A  +  EM  +G  P 
Sbjct: 648 PDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPD 684



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 157/327 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  V + + Q G     I+++T+I    K+ +      + + M+     P+ A + TL
Sbjct: 387 ERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTL 446

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I ALCK   + +  ++L    G  C+P V+  + LI  + + +R+ E    L  M++   
Sbjct: 447 IDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRC 506

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ +V    K R +  A ++++ M   G   +   Y+  I ++C+   ++ A  
Sbjct: 507 YPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFK 566

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ M+ A   P   T++ LI G  KA  ++++    ++M+     P+   +N +I  LC
Sbjct: 567 MLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLC 626

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +    +QA  ML +   +  +P+ ITY+ LI G      ++E  ++  EM+ K   P   
Sbjct: 627 KINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRM 686

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKS 331
            Y +L+ +L +   LE  ++  K M++
Sbjct: 687 TYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/342 (21%), Positives = 163/342 (47%), Gaps = 1/342 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +  A D+ R   +  +    ++++TLI    ++ +    + ++  M       +    ++
Sbjct: 142 YSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKS 201

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++  LC  GQ    V +  R   K C P  +   ++I  + + +R+++ + LL+ M+   
Sbjct: 202 ILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 260

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +  +Y+ +++   K   +E+AL + E+M+ RG   +   YTT I   C+  +++EA 
Sbjct: 261 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEAC 320

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +M +M   G +P   T+  L++G  +   ++ ++    +M  R   P+   +N ++   
Sbjct: 321 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVF 380

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C   + ++A+ +L + +  G  P+ I YS +I G+ K G+++E   L  +M  +   P +
Sbjct: 381 CRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDV 440

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              ++LI +LC+   ++ A +  ++       P V  Y  L+
Sbjct: 441 ACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILI 482



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 1/245 (0%)

Query: 129  IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
              ++++++   +  ++ +A  + +EM + G   N  ++   I   C   K++ A  L +E
Sbjct: 878  FTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKE 937

Query: 189  MENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            ME +G  P D  T++ +++   K+ +++++    E M+S+   P+   ++ ++  LC+ G
Sbjct: 938  MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997

Query: 248  NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               +A  +L      G SPN +TY+ +I G+ K G I E   L  EM      P +  YT
Sbjct: 998  KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057

Query: 308  SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
             L+ + C+CGK E+A    ++M     VP +  Y SL+ +  +K    +A  L   M+ +
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117

Query: 368  GLKPS 372
            G  P+
Sbjct: 1118 GCVPN 1122



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 3/314 (0%)

Query: 64  LISALCKGGQLQTYVDML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L++ L K  Q     D+   RI G+     V  +T LI   I+  +I     L   M RK
Sbjct: 132 LLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYST-LISGFIRAGKILPAYELFDEMNRK 190

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +      +  I+           A++ + EM K     +S  Y T I    +  ++++A
Sbjct: 191 GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDA 249

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++EM + G  P   ++N ++ G  KA R+E +L   EQM++R   P   ++  +I  
Sbjct: 250 IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVING 309

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A  ++   + +G  PN ITY  L+ G+ + G++   ++L  +M  +   P 
Sbjct: 310 LCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 369

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y +++   C+   +E A +  ++M      P    Y +++    + G   +A  L E
Sbjct: 370 AITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLE 429

Query: 363 EMVSEGLKPSTSYL 376
           +M+  G +P  + L
Sbjct: 430 QMIRRGCRPDVACL 443



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 176/392 (44%), Gaps = 34/392 (8%)

Query: 8    FDVCRYL-----EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
            FD   YL      ++G S  +I++NT+I  + KS R D  ++++  ML +   P++ T  
Sbjct: 1209 FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYS 1268

Query: 63   TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             +IS+LCK   +    ++L+ +      P  I   +LI    +   +++ + +L+ +L K
Sbjct: 1269 IVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSK 1328

Query: 123  NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                D + +S+ +    K   L  A  + E ML+ G   ++  Y T +  +C+    E+A
Sbjct: 1329 GSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDA 1388

Query: 183  NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-----------SRKLLP 231
              L + M   G +P + T+  L+      K  ++ L+   + M           S KL  
Sbjct: 1389 VDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEA 1448

Query: 232  SCSAFNE------MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
            S     +      ++    +CG+ + A  +    +D+    N + +S ++G Y    + +
Sbjct: 1449 SIEVEADVRLGCAIVDMFGKCGSPQDARKVFE-GMDQ---RNVVLWSAMLGVYVFHKQEE 1504

Query: 286  EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYESL 344
            +   L+  M  + + P    + SL++  C  G L+ A D++  I + + L PGVD +  +
Sbjct: 1505 QAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCV 1564

Query: 345  VGIHLEKG--NKAKALHLCEEMVSEGLKPSTS 374
            + +    G  N+A+ L     M+    KPS +
Sbjct: 1565 IDLLGRLGLVNEAEDL-----MLGMPCKPSAA 1591



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 1/252 (0%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R    H+    + ++   VK      A  ++   ++  +  ++  Y+T I  +   GKI 
Sbjct: 119 RDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKIL 178

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L  EM   GLK +      ++ G   A +  +++ +  + MS+   P    +N MI
Sbjct: 179 PAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTCPPDSVTYNTMI 237

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L +      A  +L   +D GF+PN  +Y+ ++ G+ K   ++  L L  +M  +   
Sbjct: 238 NGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCP 297

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P + +YT++I+ LC+  +++EA +    M      P V  Y +LV      G+   A+ L
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357

Query: 361 CEEMVSEGLKPS 372
             +M   G +P+
Sbjct: 358 VRKMTERGYRPN 369


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 171/360 (47%), Gaps = 1/360 (0%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++ ++GF L + ++N+LI  + K    D    I  HM+     PN  T  TLI  LCK  
Sbjct: 327 FMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKEN 386

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            ++   ++   +  K   P V    SLI  +      E  M L + M  K    D   YS
Sbjct: 387 HVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYS 446

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++ +    R L+ AL++ +EM   G + N  VY T I   C+  ++ +A  +  +ME  
Sbjct: 447 ILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEML 506

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G+     T+N LI G  K+KR+EE+    +QM+   L P    +  M++  C+ G+ K+A
Sbjct: 507 GVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRA 566

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++      G  P+ +TY  LIGG  K G +    KL   ++ K +  T  AY  +I +
Sbjct: 567 ADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQA 626

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKP 371
           LC+  + +EA + F+ M      P V  Y+ +  G+    G   +A+    EM+ +G+ P
Sbjct: 627 LCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILP 686



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 173/358 (48%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           E+ GF    ++FN L++ + ++        +   MLE     +  T  +LIS LCK G++
Sbjct: 294 EEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI 353

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              V++L  +  + C P  +   +LI  + +E  +E    L + +  K ++ D   ++ +
Sbjct: 354 DEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSL 413

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +       N E A+ ++EEM ++G   + F Y+  I + C   +++EA  L++EME +G 
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                 +N LI+G  K  R+ ++    +QM    +  S   +N +I  LC+    ++A  
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           ++   + +G  P++ TY+ ++  + ++G+I+    +   M      P +  Y +LI  LC
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + G+++ A K  + ++   +V     Y  ++    ++    +A+ L  EM+ +G  P 
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPD 651



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 150/311 (48%), Gaps = 1/311 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ R L  +G    + +FN+LI  +  +   ++   +++ M E    P+E T   L
Sbjct: 389 EAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSIL 448

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +LC   +L+  + +L  +    C+  V+V  +LI  + +  R+ +   +  +M    +
Sbjct: 449 IESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGV 508

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              ++ Y+ ++    K + +E A  + ++M+  G   + F YTT +  +C+ G I+ A  
Sbjct: 509 SRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAAD 568

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++Q M   G +P   T+  LI G  KA R++ +      +  + ++ +  A+N +I+ LC
Sbjct: 569 IVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALC 628

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPTL 303
           +    K+A  +    ++KG  P+ ITY  +  G     G IQE +    EM  K I P  
Sbjct: 629 KRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEF 688

Query: 304 PAYTSLISSLC 314
           P++  L   LC
Sbjct: 689 PSFGFLAEGLC 699



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 151/321 (47%), Gaps = 4/321 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N  + ++ K+++  LV  ++  M+ +   P+ +T   LI ALCK  QL+  + ML+ + 
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                P     T+L+   I+E  +E  + + + M+       +++ +++V    K   +E
Sbjct: 227 NYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIE 286

Query: 146 SAL-VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            AL  +YEE    GF  +   +   +   C  G I++   +M  M   G +    T+N L
Sbjct: 287 EALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSL 343

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  K   I+E++     M+SR   P+   +N +I  LC+  + + A  +  +   KG 
Sbjct: 344 ISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  T++ LI G       +  ++L+ EM+ K   P    Y+ LI SLC   +L+EA  
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463

Query: 325 YFKIMKSHSLVPGVDIYESLV 345
             K M+       V +Y +L+
Sbjct: 464 LLKEMELSGCARNVVVYNTLI 484



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 152/348 (43%), Gaps = 37/348 (10%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F TL+    +    +   RI + M+E+       ++  L++ LCK G+++         
Sbjct: 236 TFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEE-------- 287

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                           LR I E   EEG              D + ++ +V    +  ++
Sbjct: 288 ---------------ALRFIYE---EEGFC-----------PDQVTFNALVNGLCRTGHI 318

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           +  L + + ML++GF  + + Y + I   C+ G+I+EA  ++  M +   +P   T+N L
Sbjct: 319 KQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTL 378

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    K   +E +      + S+ +LP    FN +I+ LC   N + A  +     +KG 
Sbjct: 379 IGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGC 438

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+E TYS LI     E  ++E L L  EME    +  +  Y +LI  LC+  ++ +A+ 
Sbjct: 439 DPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAED 498

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            F  M+   +      Y +L+    +     +A  L ++M+ EGLKP 
Sbjct: 499 IFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 51/352 (14%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ--------EERIEEGMVL 115
           L+  L + G   + + +L ++H  +    + V+ S  L  ++           I    +L
Sbjct: 98  LLRQLARAGSFDSMLTLLRQMHSSK----IPVDESTFLIFLETYATSHHLHAEINPLFLL 153

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           ++R     +  DT  Y++ +   VK   L+    ++ +M+      +   +   I A C+
Sbjct: 154 MERDFA--VKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCK 211

Query: 176 YGKIEEANCLMQEMENAGLKPYDETF---------------------------------- 201
             ++  A  ++++M N GL+P ++TF                                  
Sbjct: 212 AHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVS 271

Query: 202 -NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N+L+ G  K  RIEE+L +  +       P    FN ++  LC  G+ KQ   M+   L
Sbjct: 272 VNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFML 329

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           +KGF  +  TY+ LI G  K GEI E +++ + M  +   P    Y +LI +LC+   +E
Sbjct: 330 EKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVE 389

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            A +  +++ S  ++P V  + SL+       N+  A+ L EEM  +G  P 
Sbjct: 390 AATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD 441


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 11/359 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ ++ +I  + K  R+     +Y  M E   +P+  T   +I   C  G+      +L
Sbjct: 248 NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLL 307

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ +P V+  ++LI   ++E +  E   L   ML + +I +TI Y+ ++    K 
Sbjct: 308 QEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQ 367

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++  M  +G S + F + T I  YC   +I++   L+ EM   GL     T+
Sbjct: 368 NRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTY 427

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML----- 256
           N LI G      +  +L   +QM+S  + P     N ++  LC+ G  K A  M      
Sbjct: 428 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 487

Query: 257 -TLALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             + LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 488 SKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMI 547

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + LC+  +L+EA + F  M S S  P V  + +LV  + + G     L L  EM   G+
Sbjct: 548 NGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGI 606



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 165/355 (46%), Gaps = 7/355 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDM 80
           S+I FN L+ VV + +R DLV  +YQ M E  + P +  +   LI   C   +L   +  
Sbjct: 76  SVIDFNKLMGVVVRMERPDLVISLYQKM-ERKQIPCDVYSFNILIKCFCSCSKLPFALST 134

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
             +I      P V+  ++L+  +  E+R+ E + L  +M R N++     ++ ++    +
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVV----TFTTLMNGLCR 190

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN-AGLKPYDE 199
              +  A+ + + M++ G   N   Y T +   C+ G    A  L+++ME  + +KP   
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            ++ +I+G  K  R  ++ +   +M  + + P    +N MI   C  G   +A  +L   
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L++  +PN +TYS LI  Y KE +  E  +LY EM  + I P    Y S+I   C+  +L
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           + A+  F +M +    P V  + +L+  +           L  EM   GL   T+
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTT 425



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 168/360 (46%), Gaps = 11/360 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  + ++++++ LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M   +  K CSP V    +LI      +RI++G  LL  M    ++ DT  Y+ ++
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + ++M+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P  +T+N+LI G     +  E+    ++M  R ++P+   ++ MI  LC
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLC 551

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSP+ +T++ L+ GY K G + + L+L+ EM  + I     
Sbjct: 552 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAI 611

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI    + G +  A   F+ M S  + P      S++ +   K    +A+ + E++
Sbjct: 612 TYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 5/348 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   +++F+TL+H +   DR      ++  M      PN  T  TL++ LC+ G++   
Sbjct: 142 GFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVEA 197

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLIVY 136
           V +LDR+      P  I   +++  + +       + LL++M   + I  + + YS I+ 
Sbjct: 198 VALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIID 257

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K      A  +Y EM ++G   + F Y   I  +C  G+  EA  L+QEM    + P
Sbjct: 258 GLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINP 317

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T++ LI    K ++  E+    ++M+ R ++P+   +N MI   C+      A  M 
Sbjct: 318 NVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMF 377

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            +   KG SP+  T++ LI GY     I +  +L +EM    +      Y +LI   C  
Sbjct: 378 YVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLV 437

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           G L  A    + M S  + P +    +L+    + G    AL + + M
Sbjct: 438 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 485



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 121/265 (45%), Gaps = 5/265 (1%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E+ + L   M+R   +   I ++ ++   V+M   +  + +Y++M ++    + + +  
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C   K+  A     ++   G +P   TF+ L+ G     R+ E+L    QM    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR-- 175

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   F  ++  LC  G   +A  +L   ++ G  PN+ITY  ++ G  K G+    L
Sbjct: 176 --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 289 KLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            L  +ME  S I P +  Y+++I  L + G+  +A   +  M+   + P +  Y  ++  
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPS 372
               G  ++A  L +EM+   + P+
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPN 318



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 125/320 (39%), Gaps = 46/320 (14%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S  + +FNTLI     + R D    +   M E     +  T  TLI   C  G 
Sbjct: 380 MATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGD 439

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI-------- 125
           L   +D+  ++      P ++   +L+  +    ++++ + + K M +  M         
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN 499

Query: 126 ---HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D   Y++++   +       A  +Y+EM  RG   N+  Y++ I   C+  +++EA
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +   M +    P   TFN L+ G  KA R+++ L                 F EM RR
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLEL---------------FCEMGRR 604

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
                               G   + ITY  LI G+ K G I   L ++ EM    + P 
Sbjct: 605 --------------------GIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPD 644

Query: 303 LPAYTSLISSLCQCGKLEEA 322
                S+++ L    +L+ A
Sbjct: 645 TITIRSMLTVLWSKEELKRA 664



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 82/173 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    + ++N LI  +    +      +Y+ M      PN  T  ++I+ LCK  +L   
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             M D +  K  SP V+   +L+    +  R+++G+ L   M R+ ++ D I Y  +++ 
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
             K+ N+  AL +++EM+  G   ++    + +       +++ A  ++++++
Sbjct: 620 FRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 76/196 (38%), Gaps = 39/196 (19%)

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE------------------------- 238
           L  G  + K +E+++     M+  + LPS   FN+                         
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 239 ----------MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
                     +I+  C C     A          GF P+ +T+S L+ G   E  + E L
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            L+++M      P +  +T+L++ LC+ G++ EA      M    L P    Y ++V   
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 349 LEKGNKAKALHLCEEM 364
            + G+   AL+L  +M
Sbjct: 224 CKIGDTVSALNLLRKM 239


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 2/343 (0%)

Query: 5   EVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI-R 62
           + A D+ R + +RG  + +  ++ T+I    K  R D   +++  ML       EA +  
Sbjct: 162 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 221

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C  G+L T +   DR+  +  +  V     L+  +  + R  E   L++ M  K
Sbjct: 222 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 281

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++    K  N++ AL ++E M +RG  A    YT  I A  + G+++E 
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  E    G++P    +N LI   + +  I+ +     +M  +++ P    +N ++R 
Sbjct: 342 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 401

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G   +A  ++    ++G  P+ +TY+ LI GY+ +G++++ L++  EM  K  +PT
Sbjct: 402 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 461

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           L  Y +LI  LC+ G+ ++A+   K M  + + P    Y SL+
Sbjct: 462 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 159/326 (48%), Gaps = 2/326 (0%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEE 107
           +L  +  PN  T  T+I+  C  G++Q  +D++  +  +   +P      ++I    +  
Sbjct: 136 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 195

Query: 108 RIEEGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           R++E + +   ML K  +  + + Y+ ++        L++AL+  + M++RG +     Y
Sbjct: 196 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 255

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              + A    G+  EA  L++EM   GL P   T+N+LI G  K   ++++L   E M  
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           R +  +   +  +I  L + G  ++ + +   A+ +G  P+ + Y+ LI  ++  G I  
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             ++  EME K I+P    Y +L+  LC  G+++EA K    M    + P +  Y +L+ 
Sbjct: 376 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 435

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  KG+   AL +  EM+++G  P+
Sbjct: 436 GYSMKGDVKDALRIRNEMMNKGFNPT 461



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 163/357 (45%), Gaps = 2/357 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLD 82
           +++NT+I       R      I + M E     PN+ T  T+IS  CK G++   V + D
Sbjct: 146 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 205

Query: 83  RIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +  K    P  ++  +LI     + +++  ++   RM+ + +      Y+L+V+A    
Sbjct: 206 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 265

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  + EEM  +G + + F Y   I  +C+ G +++A  + + M   G++    T+
Sbjct: 266 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 325

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI   +K  +++E+    ++ + R + P    +N +I      GN  +A  ++     
Sbjct: 326 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 385

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +P+++TY+ L+ G    G + E  KL  EM  + I P L  Y +LIS     G +++
Sbjct: 386 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 445

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A +    M +    P +  Y +L+    + G    A ++ +EMV  G+ P  S   S
Sbjct: 446 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 502



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 135/268 (50%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG ++++ ++N L+H +    R    + + + M      P+  T   LI+  CK G ++
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 304

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++ + +  +     V+  T+LI  + ++ +++E   L    +R+ +  D + Y+ ++
Sbjct: 305 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 364

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +     N++ A  +  EM K+  + +   Y T +   C  G+++EA  L+ EM   G++
Sbjct: 365 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G +    ++++L    +MM++   P+   +N +I+ LC+ G    A  M
Sbjct: 425 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 484

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGE 283
           +   ++ G +P++ TY  LI G   E E
Sbjct: 485 VKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 37/257 (14%)

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKA 211
           E+L++    N+  Y T I  +C  G+++ A  +M+EM E  G+ P   T+  +I G  K 
Sbjct: 135 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 212 KRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQA------------------ 252
            R++E++   ++M+++ ++ P    +N +I   C+ G    A                  
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 253 ----------NGMLTLALD-------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
                     +G  T A +       KG +P+  TY+ LI G+ KEG +++ L+++  M 
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + +  T+  YT+LI +L + G+++E DK F       + P + +Y +L+  H   GN  
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 374

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  +  EM  + + P 
Sbjct: 375 RAFEIMGEMEKKRIAPD 391



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 106/238 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  +G +  + ++N LI+   K         I+++M          T   LI 
Sbjct: 271 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 330

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL K GQ+Q    + D    +   P +++  +LI        I+    ++  M +K +  
Sbjct: 331 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 390

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  ++ A  + +EM +RG   +   Y T I  Y   G +++A  + 
Sbjct: 391 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 450

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            EM N G  P   T+N LI+G  K  + +++ +  ++M+   + P  S +  +I  L 
Sbjct: 451 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 225 MSRKLLPSCSA-FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M R  LP C+  FN M+R LC  G   +A  +L     +   PN +TY+ +I G+   G 
Sbjct: 105 MFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR----QMPRPNAVTYNTVIAGFCSRGR 160

Query: 284 IQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIY 341
           +Q  L +  EM E   I+P    Y ++IS  C+ G+++EA K F  M +   V P   +Y
Sbjct: 161 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 220

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +L+G + ++G    AL   + MV  G+
Sbjct: 221 NALIGGYCDQGKLDTALLYRDRMVERGV 248


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 175/351 (49%), Gaps = 7/351 (1%)

Query: 31  HVVTKSDRN---DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
           H++ +  RN    LV R++    + +  PN  T   +I  LCK G+L     +  R+   
Sbjct: 174 HILLRLARNRQGGLVRRLF----DLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAM 229

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
            CSP V+   SLI    +   +EE   L+  M +     D + Y+ ++    K   +E A
Sbjct: 230 GCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKA 289

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
              + EM ++G  AN   ++TF+ A+C+ G ++EA  L  +M   G+ P + T+  L++G
Sbjct: 290 YSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDG 349

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             KA R+++++   ++M+ + L+P+   +  M+  LC+ G   +A+ +L+L    G   N
Sbjct: 350 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKAN 409

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           E+ Y+ LI G+      +  L L  +M+ K +   +  Y +LI  LC+  K++EA     
Sbjct: 410 ELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH 469

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            M    L P   IY +++    + G +++A+ L  +++  G +P+    C+
Sbjct: 470 KMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCA 520



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 175/397 (44%), Gaps = 35/397 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A+     ++++G   ++++F+T +    K        +++  M      PNE T  +L
Sbjct: 287 EKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSL 346

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI--------------- 109
           +   CK G+L   + +LD +  +   P V+  T ++  + +E ++               
Sbjct: 347 VDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGV 406

Query: 110 --------------------EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
                               E  + LL +M  K M  D   Y  +++   K + ++ A  
Sbjct: 407 KANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKS 466

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +  +M   G   N+ +YTT + A  + GK  EA  L+ ++ ++G +P   T+  LI+G  
Sbjct: 467 LLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLC 526

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           KA  I E++S+  +M    L P+  A+  +I   C+ G+  +A  ++   +DKG S +++
Sbjct: 527 KAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKV 586

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+ LI GY K+  +Q+   L  +M    +   L  YT  IS  C    ++EA      M
Sbjct: 587 VYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 646

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
               + P   +Y  L+  + + GN  +A  L  EM S
Sbjct: 647 IGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 165/356 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G S  ++++N+LI    K    + V ++   M ++    +  T   LI+   K G+
Sbjct: 226 MKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGR 285

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++        +  +     V+  ++ +    +E  ++E M L  +M  + M+ +   Y+ 
Sbjct: 286 MEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTS 345

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K   L+ A+V+ +EM+ +G   N   YT  +   C+ GK+ EA+ ++  ME  G
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +K  +  +  LI G       E +L    QM ++ +    S +  +I  LC+     +A 
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L      G  PN + Y+ ++    K G+  E + L +++      P +  Y +LI  L
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+ G + EA  +F  M+   L P V  Y +L+    + G+  KA+HL  EM+ +G+
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGM 581



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 4/316 (1%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           + + TL+S L   G L   V  L R+   R  P       ++LR+ +    + G+V  +R
Sbjct: 135 SVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNR--QGGLV--RR 190

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           +     + +   +++++    K   L  A  ++  M   G S +   Y + I  Y + G 
Sbjct: 191 LFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGD 250

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +EE   L+ EM  +G      T+N LI   +K  R+E++ SY  +M  + ++ +   F+ 
Sbjct: 251 LEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFST 310

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            +   C+ G  ++A  +      +G  PNE TY+ L+ G  K G + + + L  EM ++ 
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 370

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           + P +  YT ++  LC+ GK+ EAD    +M+   +     +Y +L+  H    N  +AL
Sbjct: 371 LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERAL 430

Query: 359 HLCEEMVSEGLKPSTS 374
            L  +M ++G++   S
Sbjct: 431 DLLNQMKNKGMELDVS 446


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 189/382 (49%), Gaps = 11/382 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M +    PN  +  
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166

Query: 63  TLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            L+  LC   + Q  +++L  +   G  C P V+  T++I    +E  +++       ML
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + ++ + + YS I+ A  K + ++ A+ V   M+K G   N   Y + +  YC  G+ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA   +++M + G++P   T+N L++   K  R  E+    + M  R L P  + +  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +     G   + +G+L L +  G  PN   +S LI  YAK+G++ + + ++ +M  + ++
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGNKAK 356
           P    Y ++I  LC+ G++E+A +YF+ M    L PG  +Y SL  IH     +K +KAK
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL--IHSLCIFDKWDKAK 464

Query: 357 ALHLCEEMVSEGLKPSTSYLCS 378
            L L  EM+  G+   T +  S
Sbjct: 465 ELIL--EMLDRGICLDTIFFNS 484



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 167/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   ++++++++I  + K+   D    +   M++N   PN  T  +++   C  GQ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++H     P V+   SL+  + +  R  E   +   M ++ +  +   Y  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   N +V++  I AY + GK+++A  +  +M   GL 
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  +I    K+ R+E+++ Y EQM+  +L P    +N +I  LC      +A  +
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   + I ++ +I  + KEG + E  KL+  M    + P +  Y++LI   C 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA K    M S  + P    Y +L+  + +      AL L  EM S G+ P 
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 155/327 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+ LI    K  + D    ++  M +    P+  T  T+I  LCK G+++  +   +++ 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +R SP  IV  SLI  +   ++ ++   L+  ML + +  DTI ++ I+ +  K   + 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   +   Y+T I  YC  GK++EA  L+  M + G+KP   T+N LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+E++L    +M S  + P    +N +++ L +      A  +     + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKG 352
           F  + ++ LVP V  Y  +    +E+G
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 147/320 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G    ++++N+L+  + K+ R     +++  M +    P   T  TL+ 
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V + LI    ++ ++++ M++  +M ++ +  
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT+ Y  ++    K   +E A+  +E+M+    S  + VY + I + C + K ++A  L+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I+   K  R+ ES    + M+   + P    ++ +I   C  
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L   +  G  P+ +TY+ LI GY K   +++ L L+ EME   +SP +  Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 307 TSLISSLCQCGKLEEADKYF 326
             ++  L Q  +   A + +
Sbjct: 588 NIILQGLFQTRRTAAAKELY 607



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 158/359 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++ TL+           +  +   M+ N  +PN      LI A  K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +  ++  +  +P  +   ++I  + +  R+E+ M   ++M+ + +    I Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++++       + A  +  EML RG   ++  + + I ++C+ G++ E+  L   M   G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T++ LI+G   A +++E+      M+S  + P C  +N +I   C+    + A 
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G SP+ ITY+ ++ G  +        +LY  +        L  Y  ++  L
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+    +EA + F+ +    L      +  ++G  L+ G   +A  L   + + GL P 
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 10/331 (3%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  RY EQ      S   I +N+LIH +   D+ D    +   ML+     +     ++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P +I  ++LI       +++E   LL  M+  
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVK---PDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            M  D + Y+ ++    K+  +E ALV++ EM   G S +   Y   +    +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  P+  TYS +     ++G ++E+  L+  ME    +  
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 303 LPAYTSLISSLCQCGKLEEADKY-FKIMKSH 332
                S++  L Q G +  A  Y F I + H
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 3/312 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  L  I FN++I    K  R     +++  M+     P+  T  TLI   C  G++ 
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L  +      P  +   +LI    +  R+E+ +VL + M    +  D I Y++I+
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               + R   +A  +Y  + + G       Y   +   C+    +EA  + Q +    L+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               TFN++I    K  R +E+      + +  L+P    ++ M   L E G  ++ + +
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT-SLISSLC 314
                + G + N    + ++    + G+I       + ++ K  S  L A T SL   L 
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS--LEASTASLFLDLL 769

Query: 315 QCGKLEEADKYF 326
             GK +E  ++ 
Sbjct: 770 SGGKYQEYHRFL 781


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 171/364 (46%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           + + + + G+    +++N +I    +    +  + +   M +    PN  T   +I+ LC
Sbjct: 405 ILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLC 464

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G+ +    +L+++      P   V   LI    +E         LK+M R+N+  D  
Sbjct: 465 QIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLY 524

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++     +  ++ A+  Y+EML++GF  N F Y   I  Y   G +E+A  L+ +M
Sbjct: 525 CYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            N+GL P D  +  ++EG  K+  +E+  S  + M+ + L+P    +  +I  L   G+ 
Sbjct: 585 LNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHM 644

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           + A  +L++    G  P+ + Y  LI G+ K  ++++ + L  EM  K I P +  Y +L
Sbjct: 645 QAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNAL 704

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I   C+   +  A   F  +    L P    Y +L+  + + G+   A+ L  EM++EG+
Sbjct: 705 IDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGV 764

Query: 370 KPST 373
            P  
Sbjct: 765 APDA 768



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 167/365 (45%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           + V  ++E  G S  + +++TLI    K    +   ++ + M E     N  T  TLI  
Sbjct: 228 WKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LC+ G ++        +      P      ++I  + +  R ++   LL  M    ++ +
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + YS ++   ++  N + A  + +EM   G   N   Y   I   C+ G++  A+ +++
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M   G      T+NL+IEG  +    EE+     +M    + P+   ++ +I  LC+ G
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
            +++A+G+L   +  G  PN   Y+ LI GY +EG      +   +M  ++++P L  Y 
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYN 527

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           SLI  L   GK++EA +Y+  M      P    Y  L+  +   GN  KA  L  +M++ 
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS 587

Query: 368 GLKPS 372
           GL P+
Sbjct: 588 GLNPN 592



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 169/356 (47%), Gaps = 2/356 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F +A +  + + +   +  L  +N+LI  ++   + D     Y  MLE    PN+ T   
Sbjct: 504 FSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGG 563

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI      G L+    +L ++     +P   +   ++    + + +E+    LK ML K 
Sbjct: 564 LIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D   Y ++++      ++++A+ V   + K G   +S +Y + I  +C+   +E+A 
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM   G++P    +N LI+G  K+  I  + +    ++ + L P+C  +  +I   
Sbjct: 684 GLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGY 743

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ + A  +    L +G +P+   YS L  G +  G++Q+ L +  EM  +  +  +
Sbjct: 744 CKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-II 802

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            ++ +L+   C+ GKL+E  K+  +M    +VP +   E++V I L +  K    H
Sbjct: 803 SSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIV-IGLGEAGKLSEAH 857



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 166/357 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +++ ++TLI    +    D  ++I + M      PN+ T   LI  LCK G++   
Sbjct: 343 GLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRA 402

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L ++         +    +I   +++   EE  +LL  M +  +  +   YS+I+  
Sbjct: 403 SRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIING 462

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++   E A  + E+M+  G   N+FVY   I  YC  G    A   +++M    L P 
Sbjct: 463 LCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPD 522

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N LI G +   +++E++ Y ++M+ +   P+   +  +I      GN ++A  +L 
Sbjct: 523 LYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLH 582

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L+ G +PN+  Y+ ++ GY K   +++V      M  K + P    Y  +I +L   G
Sbjct: 583 QMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSG 642

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            ++ A     +++ + LVP   IY SL+    +  +  KA+ L +EM  +G++P  S
Sbjct: 643 HMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGIS 699



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 35/220 (15%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ME AG+ P   T++ LIE   K + +E +    E+M       +   +N +I  LC  G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 249 AKQA-----------------------NGMLTLA--------LDK----GFSPNEITYSH 273
            ++A                       NG+            LD+    G  PN + YS 
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI G+ ++G   E  K+  EM    + P    Y +LI  LC+ G++  A +  K M    
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +     Y  ++  HL + NK +A  L  EM   G+ P+ 
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNV 453


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 169/358 (47%), Gaps = 4/358 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +GF   + ++  +IH +   +R     +  + M      PN  T   LI  LCKGG++ 
Sbjct: 39  SKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVD 98

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V +L ++  K+C P  +   SLI  + + ER  E   LL+ M+    I D   Y+ ++
Sbjct: 99  EAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 157

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-L 194
               K +  + AL V+E+++ RGF  +   Y+  I   C+ G+++EA  L   M  +G  
Sbjct: 158 TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSC 217

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+N LI G  +  +++E+++  E+M      P    +  ++   C+      A  
Sbjct: 218 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYD 277

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L     KG +P+ +T++ L+ G  +E  + + + +  EM  KS SPT+  Y +++   C
Sbjct: 278 LLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC 337

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  +LEEA K+  +++     P V  +  ++    +    ++A+ L EE       P 
Sbjct: 338 RANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 174/365 (47%), Gaps = 8/365 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+D+   +   G    + ++ TLI    KS ++D   R+++ ++     P+  T   LI 
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 67  ALCKGGQLQTYVDMLDR-IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            LCK G+L+  +D+  R I    C P  +   SLI    +  +++E M LL+RM      
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ ++    K+  L+ A  +  +M ++G + +   +T+ +   C   ++ +A  +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM      P   T+N +++G  +A ++EE+  +  + M     P+  +FN MIR LC+
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCK 371

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLP 304
              + +A  ++  A  +  +P+ + Y+ +I G  +E ++ E  ++Y +M E     P   
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y++L++ LC  G L+ A  Y +       VP +  Y  L+    +      A  L ++M
Sbjct: 432 TYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487

Query: 365 VSEGL 369
           V  G 
Sbjct: 488 VQRGF 492



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 2/285 (0%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           CS   +  TSLI  + + +R+E+ ++ L +M+ K    D   Y+ +++A      L  A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
              EEM  R  + N   YT  I   C+ G+++EA  L+ +M    + P   T+N LI G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            KA+R  E+    E+M+    +P    +  +I   C+   +  A  +    + +GF P+ 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           +TYS LI G  KEG ++E + L+  M +  S  P    Y SLIS  C+ GK++EA    +
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M      P V  Y +L+    +      A  L  +M  +GL P 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 153/314 (48%), Gaps = 2/314 (0%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  +LI  LCK  +L+  +  L ++  K   P V   T++I  +  E R+ E    L+ M
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             +N+  + + Y++++    K   ++ A+ +  +M K+     +  Y + I   C+  + 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKAERA 131

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            EA  L++EM  +G  P   T+  LI G  K+K+ +++L   EQ+++R   P    ++ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 240 IRRLCECGNAKQANGMLTLALDKGFS-PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           I  LC+ G  K+A  +    +  G   PN +TY+ LI G+ + G++ E + L   M    
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            SP +  YT+L++  C+  +L++A      M    L P V  + SL+     +   + A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 359 HLCEEMVSEGLKPS 372
           H+  EM  +   P+
Sbjct: 312 HILGEMRRKSCSPT 325



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 123/269 (45%), Gaps = 12/269 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   + + G S  ++++ TL++   K  R D  + +   M      P+  T  +L+ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMI 125
            LC+  +L   V +L  +  K CSP V    +++    +  ++EE     K ML + +  
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR---KFMLEEMDCP 356

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + +++++++    K+     A+ + EE  +R  + +  +YTT I   C   K++EA  +
Sbjct: 357 PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRV 416

Query: 186 MQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            ++M E  G  P   T++ L+ G   A  ++ +  Y E    +  +P+   +N +I    
Sbjct: 417 YRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFR 472

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSH 273
           +    + A  +L   + +GF    +  SH
Sbjct: 473 KANRDEDARELLDDMVQRGFG---VVQSH 498



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 56/111 (50%)

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           S + +TY+ LI G  K   +++ L    +M  K   P +  YT++I +LC   +L EA K
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           + + M + +L P V  Y  L+    + G   +A+ L  +M  + +  + +Y
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTY 118


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 169/372 (45%), Gaps = 4/372 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + ++G S S+ ++  +I  + ++ + +L   +Y  ML+    PN  T   LI+
Sbjct: 321 AINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALIN 380

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G+    + + D + G            +I  +   + IE+ MV+  +ML+     
Sbjct: 381 ELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSP 440

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ ++   +K   L +A      M +     +   Y   I  +C+ GK++ A    
Sbjct: 441 TVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFF 500

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+ P   T+  +I+G  K  +I+ +LS  E+M       S   +N +I  L + 
Sbjct: 501 YEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKG 560

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A        ++G  PN ITY+ LI G  K        K+++EME K+  P    Y
Sbjct: 561 NRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTY 620

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI  LCQ GK++ A++    +  +   P +D Y +LV     +G   +A  L E M  
Sbjct: 621 TSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKE 676

Query: 367 EGLKPSTSYLCS 378
           +GL PS    CS
Sbjct: 677 KGLSPSMEIYCS 688



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 168/351 (47%), Gaps = 2/351 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            ++ +LI    ++ + D  + ++  M+++   PN  T  TLI+ LC  G++   +DML+ 
Sbjct: 233 FTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEE 292

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K   P V   T  I  +    R+++ + L++ M +K        Y+ I+    +   
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E A+ +Y +MLK G   N+  Y   I   C  G+   A  +   ME  G     +T+N 
Sbjct: 353 MELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQ 412

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G      IE+++    +M+     P+   +N +I    + G    A   L +  +  
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+E TY  LI G+ K G++      +YEM    ISP    YT++I   C+ GK++ A 
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGLKPST 373
             F+ M+ +     ++ Y +++   L KGN+ ++A   C +M  +GL+P+T
Sbjct: 533 SLFERMEENGCSASIETYNAIIS-GLSKGNRFSEAEKFCAKMTEQGLQPNT 582



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 151/368 (41%), Gaps = 37/368 (10%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  +L SFNTL+  + K D       +Y  +  +   P+  T  T+I+ LCK G++Q   
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQ--- 214

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
                                           E +++  ++ + ++  D   Y+ ++   
Sbjct: 215 --------------------------------EAVLVFNKIFQFDLCPDAFTYTSLILGH 242

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            + R L+ A  V++ M+K G + NS  Y+T I   C  G+I EA  +++EM   G++P  
Sbjct: 243 CRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTV 302

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+ + I       R++++++    M  +   PS   +  +I  L   G  + A GM   
Sbjct: 303 YTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHK 362

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L +G  PN +TY+ LI     EG     LK++  ME          Y  +I  L     
Sbjct: 363 MLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDD 422

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           +E+A   F  M      P V  Y +L+  +L++G    A      M     +P     C 
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482

Query: 379 --ASTCRG 384
             +  C+G
Sbjct: 483 LISGFCKG 490



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 4/372 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   E A  V   + + G S +++++NTLI    K    +   R    M E+   P+E T
Sbjct: 420 MDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERT 479

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LIS  CKGG+L +       +     SP     T++I    +E +I+  + L +RM 
Sbjct: 480 YCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERME 539

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                     Y+ I+    K      A     +M ++G   N+  YT+ I   C+     
Sbjct: 540 ENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATN 599

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  +  EME     P   T+  LI G  +  +++ +    E++      P+   ++ ++
Sbjct: 600 LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLV 655

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G + +A+ ++    +KG SP+   Y  L+  + K  ++   L+++  M  K   
Sbjct: 656 SGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQ 715

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P L  Y  LI +LC   + EEA   F+ +        + ++  LV   L++G+    +  
Sbjct: 716 PHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKF 775

Query: 361 CEEMVSEGLKPS 372
              M S    PS
Sbjct: 776 LYLMESRNCTPS 787



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 135/327 (41%), Gaps = 31/327 (9%)

Query: 29  LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR 88
           LI    K  + D     +  ML+    PN+ T   +I   CK G++   + + +R+    
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           CS  +    ++I  + +  R  E      +M  + +  +TI Y+ ++    K      A 
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE---------------------------- 180
            ++ EM K+    N+  YT+ I   C+ GK++                            
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREG 662

Query: 181 ---EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
              EA+ L++ M+  GL P  E +  L+    K+ +++ +L     M  +   P    + 
Sbjct: 663 RSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYK 722

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I  LC    A++A  +    L K ++ + I ++ L+ G  +EG+    +K  Y ME +
Sbjct: 723 VLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADK 324
           + +P+L  Y  L   L + GK    D+
Sbjct: 783 NCTPSLHTYIILARELSKVGKSIGTDQ 809


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 177/367 (48%), Gaps = 1/367 (0%)

Query: 8   FDVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            D   Y+ +R ++L +L + N ++  + K+ R+   W ++  ML     P+  T  TLI+
Sbjct: 127 LDEALYVFRRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLIN 186

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A    G +    +M D++  ++  P VI  TS+I  + +E  I +   L   M    M  
Sbjct: 187 ACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRP 246

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y++++    +  ++ SA V+Y+E+L  G   N+ V+TT I  +C+  +  EA  + 
Sbjct: 247 NQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMF 306

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   G+ P    +N L++G  ++   +E+LS  ++M    L P     + ++R LC+ 
Sbjct: 307 RDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDG 366

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A   L    + G + N   Y+ LI  Y + G ++E L     M    + P + +Y
Sbjct: 367 GQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSY 426

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +SLI    + GK++ A   +  M +  + P V  Y +L+  H + G    A    +EM+ 
Sbjct: 427 SSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIE 486

Query: 367 EGLKPST 373
            G+ P+ 
Sbjct: 487 NGISPNA 493



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 165/387 (42%), Gaps = 24/387 (6%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RLF+        +++ G   +  ++N L+    + D  +  + +YQ +L +   PN    
Sbjct: 234 RLFDA-------MKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVF 286

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI   CK  +     DM   +     +P V V  SL+    +    +E + L + M R
Sbjct: 287 TTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTR 346

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  D    S++V        ++ A    E + + G + N+  Y   I  YC  G +EE
Sbjct: 347 LGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEE 406

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A      M   G++P   +++ LI+G +K  +++ +++   +M+++ + P+   +  +I 
Sbjct: 407 ALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIH 466

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE---MEYKS 298
              + G    A       ++ G SPN IT S L+ G  +E  +Q+ ++   E   ++Y  
Sbjct: 467 GHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSD 526

Query: 299 I-----------SPTLP---AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           I            P +P    Y +LI  L   G+  EA K F  M+   ++     Y  L
Sbjct: 527 IHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLL 586

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKP 371
           +      G    A+ L  +M+  G+KP
Sbjct: 587 IRGQCMLGYVLNAMMLYADMMKIGVKP 613


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 174/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +  +G SL+  ++NTLI    KS + D+  R+ + ML      N+ +  ++I 
Sbjct: 376 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVIC 435

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC      + +  +  +  +  SP   + T+LI  + +  +  + + L  + L K  + 
Sbjct: 436 LLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLV 495

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT   + +++   +   LE    + +E+L RGF  +   Y T I   C   K++EA   M
Sbjct: 496 DTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFM 555

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   GLKP + T+++LI G     ++EE++ +        ++P    ++ MI   C+ 
Sbjct: 556 DEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKA 615

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++   +    +     PN + Y+HLIG Y + G +   L+L  +M++K ISP    Y
Sbjct: 616 ERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATY 675

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI  +    ++EEA    + M+   L P V  Y +L+  + + G   K   L  EM S
Sbjct: 676 TSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 735

Query: 367 EGLKPS 372
           + + P+
Sbjct: 736 KNVHPN 741



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 171/356 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF+++  SF ++I ++      D   R    ML     P    + TLIS LCK G+    
Sbjct: 422 GFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 481

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V++  +   K        + +L+  + +  ++EEG  + K +L +  + D ++Y+ ++  
Sbjct: 482 VELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISG 541

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
               + L+ A +  +EM+K+G   +++ Y+  I       K+EEA     + +  G+ P 
Sbjct: 542 CCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPD 601

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++++I+GC KA+R EE     ++MMS  L P+   +N +I   C  G    A  +  
Sbjct: 602 VYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELRE 661

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG SPN  TY+ LI G +    ++E   L  EM  + + P +  YT+LI    + G
Sbjct: 662 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLG 721

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++ + +   + M S ++ P    Y  ++G +   GN  +A  L  EM  +G+ P +
Sbjct: 722 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDS 777



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 171/371 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ AF     + +RG   +LI+++ L+  +TK+ R    + + + M E    PN      
Sbjct: 303 YDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNN 362

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +L + G L   +++ D +  K  S       +LI    +  + +    LLK ML   
Sbjct: 363 LIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIG 422

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +  +++ ++         +SAL    EML R  S    + TT I   C++GK  +A 
Sbjct: 423 FNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAV 482

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +  N G     +T N L+ G  +A ++EE     ++++ R  +    ++N +I   
Sbjct: 483 ELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGC 542

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A   +   + KG  P+  TYS LI G     +++E ++ + + +   + P +
Sbjct: 543 CGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDV 602

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ +I   C+  + EE  K F  M S++L P   +Y  L+G +   G  + AL L E+
Sbjct: 603 YTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELRED 662

Query: 364 MVSEGLKPSTS 374
           M  +G+ P+++
Sbjct: 663 MKHKGISPNSA 673



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 144/309 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +GF +   + N L+H + ++ + +  +RI + +L      +  +  TLIS  C   +L 
Sbjct: 490 NKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLD 549

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                +D +  K   P     + LI  ++   ++EE +       R  MI D   YS+++
Sbjct: 550 EAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMI 609

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K    E    +++EM+      N+ VY   IGAYC  G++  A  L ++M++ G+ 
Sbjct: 610 DGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGIS 669

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  LI+G +   R+EE+    E+M    L P+   +  +I    + G   +   +
Sbjct: 670 PNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 729

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     K   PN+ITY+ +IGGYA++G + E  +L +EM  K I P    Y   I    +
Sbjct: 730 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLK 789

Query: 316 CGKLEEADK 324
            G + +A K
Sbjct: 790 QGGVLQAFK 798



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 135/296 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F + + +  RGF +  +S+NTLI     + + D  +     M++    P+  T   
Sbjct: 513 LEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSI 572

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L    +++  +            P V   + +I    + ER EEG  L   M+  N
Sbjct: 573 LIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN 632

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +T+ Y+ ++ A  +   L  AL + E+M  +G S NS  YT+ I       ++EEA 
Sbjct: 633 LQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 692

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM   GL+P    +  LI+G  K  ++ +      +M S+ + P+   +  MI   
Sbjct: 693 LLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 752

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
              GN  +A+ +L    +KG  P+ ITY   I GY K+G + +  K   E  Y +I
Sbjct: 753 ARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDEENYAAI 808



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 164/369 (44%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   +E+ G   +++++NT+I  +  S R D  +   + M+E    P   T   L
Sbjct: 269 EEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSIL 328

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  L K  ++     +L  +  K   P VIV  +LI  +I+   + + + +   M+ K +
Sbjct: 329 VKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGL 388

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +  Y+ ++    K    + A  + +EML  GF+ N   +T+ I   C +   + A  
Sbjct: 389 SLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALR 448

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            + EM    + P       LI G  K  +  +++    + +++  L      N ++  LC
Sbjct: 449 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLC 508

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E G  ++   +    L +GF  + ++Y+ LI G     ++ E      EM  K + P   
Sbjct: 509 EAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNY 568

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+ LI  L    K+EEA +++   K + ++P V  Y  ++    +     +   L +EM
Sbjct: 569 TYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEM 628

Query: 365 VSEGLKPST 373
           +S  L+P+T
Sbjct: 629 MSNNLQPNT 637



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 35/252 (13%)

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP-----------------YDE 199
           +G S + +++TT I A+C+ GK+EEA  L  +ME AG+ P                 YDE
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305

Query: 200 ------------------TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
                             T+++L++G  KAKRI ++    ++M  +   P+   +N +I 
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L E G+  +A  +  L + KG S    TY+ LI GY K G+     +L  EM     + 
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              ++TS+I  LC     + A ++   M   ++ PG  +  +L+    + G  +KA+ L 
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 362 EEMVSEGLKPST 373
            + +++G    T
Sbjct: 486 LKFLNKGFLVDT 497



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 5/188 (2%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE--QMMSRKLLPSCSAFNEMIRRLCEC 246
           + N G+ P   T N+L+    +A   ++    CE   ++ + + P    F   I   C+ 
Sbjct: 209 LANKGMFPSKTTCNILLTSLVRATEFQKC---CEAFHVVCKGVSPDVYLFTTAINAFCKG 265

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  + +   + G  PN +TY+ +I G    G   E      +M  + + PTL  Y
Sbjct: 266 GKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITY 325

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+  L +  ++ +A    K M      P V +Y +L+   +E G+  KA+ + + MVS
Sbjct: 326 SILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVS 385

Query: 367 EGLKPSTS 374
           +GL  ++S
Sbjct: 386 KGLSLTSS 393


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 175/356 (49%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF     ++NTL++ + K         +   ML     P+  T  +LIS LCK G+++  
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V +LD++  + CSP  +   ++I  + +E R++E   + + +  K ++ D   ++ ++  
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                N +SA+ ++EEM  +G   + F Y   I + C   K+EEA  L++EME  G    
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARN 482

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N LI+G  K KRIEE+    ++M  + +      +N +I  LC+    + A  ++ 
Sbjct: 483 VVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD 542

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G  P++ TY+ L+  + K G+I++   +   M     +P +  Y +LIS LC+ G
Sbjct: 543 QMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAG 602

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +++ A +  + ++   +V     Y  ++    ++    +A+ L  EM+ +   P  
Sbjct: 603 RVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDA 658



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 142/255 (55%), Gaps = 2/255 (0%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+R+ + HD   +++++ A  K   +  A+++ EEM   G S +   +TT +  Y E G 
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++ A  + ++M   G    D T N+LI G  K  RI+++LS+ ++ +S    P    +N 
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++  LC+ G+AK A  ++   L  G  P+  TY+ LI G  K GEI+E +K+  +M  + 
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKA 357
            SP    Y ++ISSLC+  +++EA +  +++ S  ++P V  + SL+ G+ L   +K+ A
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKS-A 432

Query: 358 LHLCEEMVSEGLKPS 372
           + L EEM  +G +P 
Sbjct: 433 MDLFEEMKGKGCRPD 447



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 160/348 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN LI  + K+ +      + + M      P+E T  T++    +GG L   + + +++
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C    +    LI    ++ RI++ +  ++  + +    D   Y+ +V    K+ + 
Sbjct: 265 VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHA 324

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A+ V + ML  G   + + Y + I   C+ G+IEEA  ++ +M +    P   T+N +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    K  R++E+      + S+ +LP    FN +I+ LC   N K A  +      KG 
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+E TY+ LI       +++E L L  EME    +  +  Y +LI   C+  ++EEA++
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEE 504

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            F  M+   +      Y +L+    +      A  L ++M+ EGL+P 
Sbjct: 505 IFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 164/351 (46%), Gaps = 1/351 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N L++V+  +++  LV   +  M+      + +T   LI ALCK  Q++  + M++ + 
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP 230

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
               SP     T+++   I+   ++  + + ++M+        +  ++++    K   ++
Sbjct: 231 SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRID 290

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            AL   +E +  GF  + F Y T +   C+ G  + A  ++  M   GL P   T+N LI
Sbjct: 291 QALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLI 350

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K   IEE++   +QM+SR   P+   +N +I  LC+     +A  +  L   KG  
Sbjct: 351 SGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGIL 410

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+  T++ LI G       +  + L+ EM+ K   P    Y  LI SLC   KLEEA   
Sbjct: 411 PDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNL 470

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL-KPSTSY 375
            K M+ +     V IY +L+    +     +A  + +EM  +G+ + S +Y
Sbjct: 471 LKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTY 521



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 139/313 (44%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +  R  S + +++N +I  + K +R D    I + +      P+  T  +L
Sbjct: 360 EEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSL 419

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC     ++ +D+ + + GK C P       LI  +    ++EE + LLK M     
Sbjct: 420 IQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ ++    K + +E A  +++EM  +G S +S  Y T I   C+  ++E+A  
Sbjct: 480 ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ 539

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           LM +M   GL+P   T+N L+    K   I+++    + M S    P    +  +I  LC
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  + A+ +L     KG       Y+ +I    K     E ++L+ EM  KS  P   
Sbjct: 600 KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659

Query: 305 AYTSLISSLCQCG 317
            Y  +   LC  G
Sbjct: 660 TYKIVYRGLCNGG 672



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 115/253 (45%), Gaps = 1/253 (0%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           + N +  +  Y  I+    K  + E    V EEM   G   +  ++  F+ +Y ++   +
Sbjct: 90  QPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYD 149

Query: 181 EANCLMQEMENA-GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           E   +++ ME+   +KP    +N+L+     A +++   S    M+ R++    S FN +
Sbjct: 150 EVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNIL 209

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I+ LC+    + A  M+      G SP+E T++ ++ GY + G +   L++  +M     
Sbjct: 210 IKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGC 269

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
             T      LI+  C+ G++++A  + +   S    P    Y +LV    + G+   A+ 
Sbjct: 270 PCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAME 329

Query: 360 LCEEMVSEGLKPS 372
           + + M+  GL P 
Sbjct: 330 VVDAMLLGGLDPD 342



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/289 (21%), Positives = 123/289 (42%), Gaps = 5/289 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A ++ + +E  G + +++ +NTLI    K+ R +    I+  M       +  T 
Sbjct: 462 RKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTY 521

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI  LCK  +++    ++D++  +   P      SL+    +   I++   +++ M  
Sbjct: 522 NTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTS 581

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                D + Y+ ++    K   ++ A  +   +  +G       Y   I A  +  +  E
Sbjct: 582 SGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHE 641

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           A  L +EM +    P   T+ ++  G C     I E++ +  +M+ R  +P  S+F  + 
Sbjct: 642 AMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLA 701

Query: 241 RRLCECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVL 288
             LC          ++ + ++K  FS  EI+    I G+ K  + Q+ L
Sbjct: 702 EGLCTLSMDDTLVKLVDMIMEKAKFSEREIS---TIRGFLKIRKFQDAL 747


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 169/358 (47%), Gaps = 4/358 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +GF   + ++  +IH +   +R     +  + M      PN  T   LI  LCKGG++ 
Sbjct: 39  SKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVD 98

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V +L ++  K+C P  +   SLI  + + ER  E   LL+ M+    I D   Y+ ++
Sbjct: 99  EAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 157

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-L 194
               K +  + AL V+E+++ RGF  +   Y+  I   C+ G+++EA  L   M  +G  
Sbjct: 158 TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSC 217

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+N LI G  +  +++E+++  E+M      P    +  ++   C+      A  
Sbjct: 218 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYD 277

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L     KG +P+ +T++ L+ G  +E  + + + +  EM  KS SPT+  Y +++   C
Sbjct: 278 LLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC 337

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  +LEEA K+  +++     P V  +  ++    +    ++A+ L EE       P 
Sbjct: 338 RANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 176/371 (47%), Gaps = 8/371 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+D+   +   G    + ++ TLI    KS ++D   R+++ ++     P+  T   LI 
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 67  ALCKGGQLQTYVDMLDR-IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            LCK G+L+  +D+  R I    C P  +   SLI    +  +++E M LL+RM      
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ ++    K+  L+ A  +  +M ++G + +   +T+ +   C   ++ +A  +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM      P   T+N +++G  +A ++EE+  +  + M     P+  +FN MIR LC+
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCK 371

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLP 304
              + +A  ++  A  +  +P+ + Y+ +I G  +E ++ E  ++Y +M E     P   
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y++LI+ LC  G L+ A  Y +       VP +  Y  L+    +      A  L ++M
Sbjct: 432 TYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487

Query: 365 VSEGLKPSTSY 375
           V  G     S+
Sbjct: 488 VQRGFGGVQSH 498



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 2/285 (0%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           CS   +  TSLI  + + +R+E+ ++ L +M+ K    D   Y+ +++A      L  A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
              EEM  R  + N   YT  I   C+ G+++EA  L+ +M    + P   T+N LI G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            KA+R  E+    E+M+    +P    +  +I   C+   +  A  +    + +GF P+ 
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           +TYS LI G  KEG ++E + L+  M +  S  P    Y SLIS  C+ GK++EA    +
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M      P V  Y +L+    +      A  L  +M  +GL P 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 153/314 (48%), Gaps = 2/314 (0%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  +LI  LCK  +L+  +  L ++  K   P V   T++I  +  E R+ E    L+ M
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             +N+  + + Y++++    K   ++ A+ +  +M K+     +  Y + I   C+  + 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKAERA 131

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            EA  L++EM  +G  P   T+  LI G  K+K+ +++L   EQ+++R   P    ++ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 240 IRRLCECGNAKQANGMLTLALDKGFS-PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           I  LC+ G  K+A  +    +  G   PN +TY+ LI G+ + G++ E + L   M    
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            SP +  YT+L++  C+  +L++A      M    L P V  + SL+     +   + A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 359 HLCEEMVSEGLKPS 372
           H+  EM  +   P+
Sbjct: 312 HILGEMRRKSCSPT 325



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 56/111 (50%)

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           S + +TY+ LI G  K   +++ L    +M  K   P +  YT++I +LC   +L EA K
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           + + M + +L P V  Y  L+    + G   +A+ L  +M  + +  + +Y
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTY 118


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 174/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++    + + +E  G S ++ + + LI+  +   R DL + +   +++    P   T  T
Sbjct: 114 YDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTT 173

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LCK G+    +++ D +  + C P V   T++I  + +         LLK+M    
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG 233

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + YS I+ +  K R +  AL ++  M  +G S + F Y + I   C + + +EA+
Sbjct: 234 CQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEAS 293

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM +  + P   TFN+L++   K  ++ E+    + M    + P    ++ ++   
Sbjct: 294 ALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGY 353

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
                  +A  +    + KG  P+  +Y+ LI GY K   I E  +L+ EM ++ ++P  
Sbjct: 354 SLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNN 413

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +Y +LI  LCQ G L EA   FK M ++  +P +  Y  L+    ++G   KA  L   
Sbjct: 414 VSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRA 473

Query: 364 MVSEGLKPS 372
           M S   KP+
Sbjct: 474 MQSTYSKPN 482



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 175/403 (43%), Gaps = 35/403 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++AF V   + + G   ++++F TLI+ + K  +      ++  M+     P+  T  T+
Sbjct: 150 DLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTI 209

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G+      +L ++    C P V+  +++I    ++ R+ E + +   M  K +
Sbjct: 210 INGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGI 269

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ ++         + A  +  EM       +   +   +   C+ GK+ EA  
Sbjct: 270 SPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQG 329

Query: 185 LMQEMENAGLKP------------------------YDE-----------TFNLLIEGCA 209
           +++ M   G++P                        +D            ++N+LI G  
Sbjct: 330 VLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC 389

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K KRI+E+     +M+ + L P+  ++N +I  LC+ G+ ++A  +       G  PN  
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF 449

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TYS L+ G+ K+G   +  +L+  M+     P L  Y  LI ++C+ G L +A K F  +
Sbjct: 450 TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               L P   IY +++    ++G   +AL     M  +G  P 
Sbjct: 510 FVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 171/363 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + +E+ G   ++++++T+I    K  R +    I+ +M      P+  T  +LI 
Sbjct: 222 AAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQ 281

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC   Q +    +L+ +      P ++    L+  I +E ++ E   +LK M    +  
Sbjct: 282 GLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS ++Y       +  A  +++ M+ +G   + F Y   I  YC+  +I+EA  L 
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLF 401

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + GL P + ++N LI G  +   + E+ +  + M +   LP+   ++ ++   C+ 
Sbjct: 402 NEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQ 461

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +          PN + Y+ LI    K G +++  KL+ E+  K + P    Y
Sbjct: 462 GYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIY 521

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T++I+ LC+ G L+EA + F+ M+     P    Y  ++   L   ++++A+ L  EM  
Sbjct: 522 TTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRD 581

Query: 367 EGL 369
           +G 
Sbjct: 582 KGF 584



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 165/363 (45%), Gaps = 36/363 (9%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQL-QTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           + HML     P       L+SA+ K GQ   T + +  ++     SP +   + LI    
Sbjct: 85  FNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFS 144

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
             +R++    +L ++++  +    + ++ ++    K+     A+ ++++M+ RG   + +
Sbjct: 145 HLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVY 204

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL---SYC 221
            YTT I   C+ G+   A  L+++ME AG +P   T++ +I+   K +R+ E+L   SY 
Sbjct: 205 TYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM 264

Query: 222 E--------------------------------QMMSRKLLPSCSAFNEMIRRLCECGNA 249
           +                                +M S  ++P    FN ++  +C+ G  
Sbjct: 265 KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A G+L    + G  P+ +TYS L+ GY+   E+ E  KL+  M  K   P + +Y  L
Sbjct: 325 SEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNIL 384

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I+  C+  +++EA + F  M    L P    Y +L+    + G+  +A +L + M + G 
Sbjct: 385 INGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGN 444

Query: 370 KPS 372
            P+
Sbjct: 445 LPN 447



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 70/156 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + +   G   +L +++ L+    K       +R+++ M      PN      LI 
Sbjct: 432 ARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILID 491

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A+CK G L+    +   +  K   P   + T++I  + +E  ++E +   + M       
Sbjct: 492 AMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 551

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           D I+Y++I+   +  ++   A+ +  EM  +GF A+
Sbjct: 552 DEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 178/353 (50%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDM 80
           S++ FN L+  + K ++ DLV  + + M +N+R   +  +   LI+  C+  QL   + +
Sbjct: 79  SIVEFNKLLSAIAKMNKFDLVISLGERM-QNLRISYDLYSYNILINCFCRRSQLPLALAV 137

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++  +SL+      +RI E + L+ +M       +T+ ++ +++    
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A+ + + M+ RG   + F Y T +   C+ G I+ A  L+++ME   ++     
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +  +I+     K + ++L+   +M ++ + P+   +N +IR LC  G    A+ +L+  +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  +PN +T+S LI  + KEG++ E  KLY EM  +SI P +  Y+SLI+  C   +L+
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA   F++M S    P V  Y +L+    +     + + L  EM   GL  +T
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 174/357 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG    L ++ T+++ + K    DL   + + M +     +     T+I ALC    +  
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +++   +  K   P V+   SLI  +    R  +   LL  M+ + +  + + +S ++ 
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A VK   L  A  +Y+EM+KR    + F Y++ I  +C + +++EA  + + M +    P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI+G  KAKR+EE +    +M  R L+ +   +N +I+ L + G+   A  + 
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +  G  P+ ITYS L+ G  K G++++ L ++  ++   + P +  Y  +I  +C+ 
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           GK+E+    F  +    + P V IY +++     KG K +A  L  EM  +G  P++
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 169/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F++   +   ++    S  L S+N LI+   +  +  L   +   M++    P+  T
Sbjct: 93  MNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  +   +LI  +    +  E + L+ RM+
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +    D   Y  +V    K  +++ AL + ++M K    A+  +YTT I A C Y  + 
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  EM+N G++P   T+N LI       R  ++      M+ RK+ P+   F+ +I
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TYS LI G+     + E   ++  M  K   
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI   C+  ++EE  + F+ M    LV     Y +L+    + G+   A  +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P 
Sbjct: 453 FKKMVSDGVPPD 464



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 168/367 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+   +++ ++L++      R      +   M      PN  T  TLI
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L    +    V ++DR+  + C P +    +++  + +   I+  + LLK+M +  + 
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ I+ A    +N+  AL ++ EM  +G   N   Y + I   C YG+  +A+ L
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M    + P   TF+ LI+   K  ++ E+    ++M+ R + P    ++ +I   C 
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  M  L + K   PN +TY+ LI G+ K   ++E ++L+ EM  + +      
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI  L Q G  + A K FK M S  + P +  Y  L+    + G   KAL + E + 
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492

Query: 366 SEGLKPS 372
              ++P 
Sbjct: 493 KSKMEPD 499



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 155/329 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   ++ +G   +++++N+LI  +    R     R+   M+E    PN  T   LI 
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K G+L     + D +  +   P +   +SLI      +R++E   + + M+ K+   
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K + +E  + ++ EM +RG   N+  Y T I    + G  + A  + 
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G+ P   T+++L++G  K  ++E++L   E +   K+ P    +N MI  +C+ 
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  +    +      KG  PN I Y+ +I G+ ++G  +E   L+ EM+     P    Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            +LI +  + G    + +  K M+S   V
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFV 602



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 140/301 (46%), Gaps = 2/301 (0%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   VD+   +   R  P ++    L+  I +  + +  + L +RM    + +D  +Y+
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL V  +M+K G+  +    ++ +  YC   +I EA  L+ +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   TFN LI G     +  E+++  ++M++R   P    +  ++  LC+ G+   A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             +L   ++KG    + + Y+ +I        + + L L+ EM+ K I P +  Y SLI 
Sbjct: 240 LSLLK-KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+  +A +    M    + P V  + +L+   +++G   +A  L +EM+   + P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 372 S 372
            
Sbjct: 359 D 359



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 123/271 (45%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           ++ + ++++ + L   M++   +   + ++ ++ A  KM   +  + + E M     S +
Sbjct: 55  VLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD 114

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
            + Y   I  +C   ++  A  ++ +M   G +P   T + L+ G    KRI E+++  +
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           QM   +  P+   FN +I  L     A +A  ++   + +G  P+  TY  ++ G  K G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +I   L L  +ME   I   +  YT++I +LC    + +A   F  M +  + P V  Y 
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           SL+      G  + A  L  +M+   + P+ 
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNV 325



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 114/260 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R     + ++++LI+     DR D    +++ M+    +PN  T  TLI   CK  +++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  +      +   +LI  + Q    +    + K+M+   +  D I YS+++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   LE ALVV+E + K     + + Y   I   C+ GK+E+   L   +   G+K
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  +I G  +    EE+ +   +M     LP+   +N +IR     G+   +  +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592

Query: 256 LTLALDKGFSPNEITYSHLI 275
           +      GF  +  T S +I
Sbjct: 593 IKEMRSCGFVGDASTISMVI 612



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 35/239 (14%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   ++ R + QRG   + +++NTLI  + ++   D+  +I++ M+ +   P+  T   L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G+L                                   E+ +V+ + + +  M
Sbjct: 472 LDGLCKYGKL-----------------------------------EKALVVFEYLQKSKM 496

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y++++    K   +E    ++  +  +G   N  +YTT I  +C  G  EEA+ 
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           L +EM+  G  P   T+N LI    +      S    ++M S   +   S  + +I  L
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 156/320 (48%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+      +I   C+ G +   + + D + G  C P V+   +L+  + +E R+ +   L
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M  + +  D   ++ +++       L+ AL +++ ML +    +   Y T I   C 
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G +++AN L  +M +  + P   T+++LI+   +  ++E++  + ++M+++ +LP+   
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I+  C  GN  +    L   +    SP+ ITY+ LI GY KE ++ +  KL   ME
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + + P +  Y  LI+     G ++EA   F+ M +  + P    Y S++  H+  GN  
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 313

Query: 356 KALHLCEEMVSEGLKPSTSY 375
           +A  L +EM+  G  P   +
Sbjct: 314 EAFQLHDEMLQRGFAPDDKF 333



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 126/261 (48%)

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           M  L+ M    ++ D + Y++++    +   +  AL V +EM+  G   +   Y T +  
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+  ++ +A  L+ EM   G+ P   TF  LI G     +++++L   + M++++L P 
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +N +I  +C  G+  +AN +      +   PN +TYS LI  + ++G++++      
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM  K I P +  Y S+I   C+ G + +  K+ + M  + + P +  Y +L+  ++++ 
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 240

Query: 353 NKAKALHLCEEMVSEGLKPST 373
               A  L   M  E ++P  
Sbjct: 241 KMHDAFKLLNMMEKEKVQPDV 261



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 120/255 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    L +F TLIH      + D   +++  ML     P+  T  TLI  +C+ G 
Sbjct: 77  MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    D+ D +H +   P  +  + LI    ++ ++E+    L  M+ K ++ + + Y+ 
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    +  N+       ++M+    S +   Y T I  Y +  K+ +A  L+  ME   
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   T+N+LI G +    ++E+    E+M ++ + P    +  MI      GN+K+A 
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316

Query: 254 GMLTLALDKGFSPNE 268
            +    L +GF+P++
Sbjct: 317 QLHDEMLQRGFAPDD 331



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 88/196 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A D+   +  R    + ++++ LI    +  + +  +     M+     PN  T  +
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C+ G +      L ++   + SP +I   +LI   I+E+++ +   LL  M ++ 
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y++++       N++ A  ++E+M  +G   + + Y + I  +   G  +EA 
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316

Query: 184 CLMQEMENAGLKPYDE 199
            L  EM   G  P D+
Sbjct: 317 QLHDEMLQRGFAPDDK 332


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 172/361 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   +L ++N++I ++ KS + D   R+ + M+     P+     TLI   CK G 
Sbjct: 36  MQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q    + D +  +R  P  I  T++I  + +  ++ E   +  +M  + +  D + Y+ 
Sbjct: 96  IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E A  ++ +M++ G + N   YT      C+ G+++ AN L+ EM   G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+    T+N L+ G  K+  I +++   E+M    + P    F  ++   C+ G   +A+
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   LD+G  P  IT++ L+ G+   G +++  +L   M  K I P    Y SL+   
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C    +    + +K M +  ++P  + Y  L+  H +  N  +A  L +EM  +G   + 
Sbjct: 336 CIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTA 395

Query: 374 S 374
           S
Sbjct: 396 S 396



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 163/319 (51%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  +  T+I+  C GG+LQ  + ++  +  K   P +    S+IL + +  ++++   +
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ M+ + ++ DT+ Y+ ++    K+ N+++A  +++EM K+    +   YT  I   C 
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK+ EA+ +  +M + G++P + T+  LI+G  K+  +E++ S   QM+   L P+   
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +   LC+ G    AN +L     KG   N  TY+ L+ G  K G I++ +KL  EME
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P    +T+L+ + C+ G++ +A +  + M    L P V  +  L+      G   
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 356 KALHLCEEMVSEGLKPSTS 374
               L   M+ +G+ P+T+
Sbjct: 308 DGERLLAWMLEKGIMPNTT 326



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 170/358 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG +  ++S++T+I+          V ++ Q M      PN  T  ++I  LCK G++  
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L  +  +   P  +V T+LI    +   I+    L   M ++ ++ D IAY+ ++ 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +   +  A  V+ +M  RG   +   YTT I  YC+ G++E+A  L  +M  +GL P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  L +G  K  +++ +     +M  + L  +   +N ++  LC+ GN +QA  ++
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                 G  P+ IT++ L+  Y K GE+ +  +L  EM  + + PT+  +  L++  C  
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           G LE+ ++    M    ++P    Y SL+  +  + N      + + M + G+ P ++
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSN 361



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 177/362 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A+ +   +E++      I++  +I  + +  +     +++  M      P+E T  T
Sbjct: 96  IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK G+++    + +++     +P V+  T+L   + +  +++    LL  M  K 
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +   Y+ +V    K  N+  A+ + EEM   G   ++  +TT + AYC+ G++ +A+
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM + GL+P   TFN+L+ G   +  +E+       M+ + ++P+ + +N ++++ 
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C   N +    +      +G  P+  TY+ LI G+ K   ++E   L+ EM  K  + T 
Sbjct: 336 CIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTA 395

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +Y S+I    +  K+ EA + F+ M+   +    +IY   V I   +GN   AL LC+E
Sbjct: 396 SSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455

Query: 364 MV 365
            +
Sbjct: 456 AI 457



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 45/80 (56%)

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+++  +P + +Y+++I+  C  G+L++  K  + M+   L P +  Y S++ +  + G 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 354 KAKALHLCEEMVSEGLKPST 373
              A  +  EM+++G+ P T
Sbjct: 61  VDDAERVLREMINQGIVPDT 80


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 175/358 (48%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG   ++IS+ T+I+ + K+    +   +++ M +N   PN  T  T+I +LCK   + 
Sbjct: 191 KRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             ++ L  +  +   P V    S++       ++ E   L K M+ ++++ +T+ ++++V
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +  A +V+E M ++G   +   Y   +  YC    + EA  + + M   G  
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N+LI G  K++R++E+ S   +M  + L P    ++ +++ LC+ G  K+A  +
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G  PN +TY  L+ G+ K G + E LKL   M+ K + P +  YT LI  +  
Sbjct: 431 FKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFI 490

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE A + F  +      P +  Y  ++   L++G   +A  L  +M  +G  P++
Sbjct: 491 AGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNS 548



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 162/355 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G     I+FN LI+ +    +      ++  M++    PN  +  T+I+ LCK G     
Sbjct: 158 GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMA 217

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           VD+  ++    C P V+  +++I  + ++  + + M  L  M+ + +  +   Y+ IV+ 
Sbjct: 218 VDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHG 277

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              +  L  A  +++EM+ R    N+  +T  +   C+ G + EA  + + M   G++P 
Sbjct: 278 FCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPD 337

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N L++G    + + E+    E M+ +   P   ++N +I   C+     +A  +L 
Sbjct: 338 ISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLA 397

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               K  +P+ +TYS L+ G  + G  +E L L+ EM      P L  Y  L+   C+ G
Sbjct: 398 EMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHG 457

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            L+EA K  K MK   L P +  Y  L+      G    A  L  ++  +G +P 
Sbjct: 458 HLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPD 512



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 177/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +     +C  ++    + ++ S N LI+ + + +  D    +   M +   +P+  T   
Sbjct: 109 YSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNA 168

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G+++  V++ + +  +   P VI  T++I  + +       + + K+M +  
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG 228

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + YS I+ +  K R +  A+    EM++RG   N F Y + +  +C  G++ EA 
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L +EM    + P   TF +L++G  K   + E+    E M  + + P  S +N ++   
Sbjct: 289 RLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  +  + + KG +P   +Y+ LI GY K   + E   L  EM +K+++P  
Sbjct: 349 CLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y++L+  LCQ G+ +EA   FK M S+   P +  Y  L+    + G+  +AL L + 
Sbjct: 409 VTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKS 468

Query: 364 MVSEGLKPS 372
           M  + L+P+
Sbjct: 469 MKEKKLEPN 477



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 172/362 (47%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A DV + +EQ G   ++++++T+I  + K    +        M+E    PN  T  +++
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIV 275

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C  GQL     +   + G+   P  +  T L+  + +E  + E  ++ + M  K + 
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVE 335

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   Y+ ++      R +  A  V+E M+++G +  +  Y   I  YC+  +++EA  L
Sbjct: 336 PDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSL 395

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM +  L P   T++ L++G  +  R +E+L+  ++M S    P+   +  ++   C+
Sbjct: 396 LAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCK 455

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+  +A  +L    +K   PN + Y+ LI G    G+++   +L+ ++      P +  
Sbjct: 456 HGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRT 515

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT +I  L + G  +EA   F+ M+    +P    Y  ++   L+  + + A+ L +EMV
Sbjct: 516 YTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575

Query: 366 SE 367
            +
Sbjct: 576 GK 577



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 152/335 (45%), Gaps = 1/335 (0%)

Query: 39  NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           +D +   Y+ +  N R P+       + +  K  Q  T V + +++   R +  V     
Sbjct: 75  DDALASFYRMVRINPR-PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI  + +   ++  + +L +M +  +  D I ++ ++        ++ A+ ++ EM+KRG
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              N   YTT I   C+ G    A  + ++ME  G KP   T++ +I+   K + + +++
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            +  +M+ R + P+   +N ++   C  G   +A  +    + +   PN +T++ L+ G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG + E   ++  M  K + P +  Y +L+   C    + EA K F+IM      PG 
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             Y  L+  + +     +A  L  EM  + L P T
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT 408



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 146/345 (42%), Gaps = 35/345 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A +    + +RG   ++ ++N+++H      + +   R+++ M+     PN  T 
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306

Query: 62  RTLISALCKGG-------------------QLQTYVDMLD-----RIHG----------- 86
             L+  LCK G                    + TY  ++D     R+             
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           K C+P       LI    +  R++E   LL  M  K +  DT+ YS ++    ++   + 
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +++EM   G   N   Y   +  +C++G ++EA  L++ M+   L+P    + +LIE
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G   A ++E +     ++      P    +  MI+ L + G + +A  +     D GF P
Sbjct: 487 GMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 546

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           N  +Y+ +I G+ +  +    ++L  EM  K  S  L  +  L+ 
Sbjct: 547 NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 120/266 (45%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ +    RM+R N     + +   + +  K +   + + +  +M     + N +    
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C    ++ +  ++ +M   G+ P   TFN LI G     +I+E++    +M+ R 
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+  ++  +I  LC+ GN   A  +       G  PN +TYS +I    K+  + + +
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +   EM  + I P +  Y S++   C  G+L EA + FK M    ++P    +  LV   
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTS 374
            ++G  ++A  + E M  +G++P  S
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDIS 339


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 182/401 (45%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   +  RG + S+   N L+  + ++D   L+W++ + M+     P+  T  TLI 
Sbjct: 66  AAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIE 125

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK  +  T   +L  +  + C    +    LI  + +   +EE     K M    ++ 
Sbjct: 126 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP 185

Query: 127 DTIAY------------------------------SLIVYAKV-----KMRNLESALVVY 151
           D   Y                              +++VYA +     +  N + A  + 
Sbjct: 186 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 245

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           +EM+  G   N   Y   +   C+ G+++ A+ L+++M     +P   T+NL+IEG  + 
Sbjct: 246 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 305

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
              +++     +M +  + P+   ++ MI  LC+ G  ++A+ +L     KG  PN   Y
Sbjct: 306 HNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 365

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI GY +EG +    +++ +M   ++ P L  Y SLI  L + G++EE+ KYF  M+ 
Sbjct: 366 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 425

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L+P    Y  L+  +L+ G+   A  L + M+  GLKP+
Sbjct: 426 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 466



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 160/350 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++N +I    +       +R+   M      PN  T   +I  LC+ G+ +   D+L+ 
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K   P   V   LI    +E  +     +  +M + N++ D   Y+ +++   K+  
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E +   + +M +RG   N F Y+  I  Y + G +E A  L+Q M + GLKP D  +  
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+E   K+  IE+  S  + M+ + ++     +  +I  L   GN + A  +L+     G
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+   YS LI G  K  + ++   +  EM  K + P +  Y +LI  LC+ G +  A 
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             F  + +  LVP    Y SL+    + G+ + A +L  EM++ G+ P  
Sbjct: 593 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 642



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 160/351 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ +  LI    +    D  +++ + M+     PN+ T   L+  LCK GQ+     +L
Sbjct: 221 NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 280

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P  I    +I    +    ++   LL  M    +  +   YS++++   + 
Sbjct: 281 KQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 340

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E A  + EEM  +G   N+FVY   I  YC  G +  A  +  +M    + P    +
Sbjct: 341 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 400

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G +K  R+EES  Y  QM  R LLP+   ++ +I    + G+ + A  ++   LD
Sbjct: 401 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  PN++ Y  L+  Y K  +I++V   +  M  + +      Y  LI +L   G +E 
Sbjct: 461 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 520

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +    ++ +  VP V +Y SL+    +  ++ KA  + +EM  +G+ P+
Sbjct: 521 AFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 571



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 165/369 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +E  G S ++ +++ +IH + +S   +    + + M      PN      LIS
Sbjct: 311 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 370

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G +    ++ D++      P +    SLI  + +  R+EE      +M  + ++ 
Sbjct: 371 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 430

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   YS +++  +K  +LESA  + + ML  G   N  +Y   + +Y +   IE+ +   
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M + G+   +  + +LI   + +  +E +     ++     +P    ++ +I  LC+ 
Sbjct: 491 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKT 550

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            + ++A G+L     KG  PN + Y+ LI G  K G+I     ++  +  K + P    Y
Sbjct: 551 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 610

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI   C+ G +  A   +  M +  + P   +Y  L       G+  +A+ L EEM  
Sbjct: 611 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL 670

Query: 367 EGLKPSTSY 375
            G    +S+
Sbjct: 671 RGHASISSF 679



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 193/477 (40%), Gaps = 105/477 (22%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R F+ A  V   + +RG  L+ +++N LI  + +S   +  +   + M +    P+  T
Sbjct: 130 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 189

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM------- 113
              LI+ LCK  +      +LD +      P V+V  +LI   ++E   +E         
Sbjct: 190 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 249

Query: 114 ----------------------------VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                                       +LLK+M+R +   DTI Y+LI+    +  N +
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP--------- 196
            A  +  EM   G S N + Y+  I   C+ G+ E+A+ L++EM   GLKP         
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369

Query: 197 ---------------YDET-----------FNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
                          +D+            +N LI G +K  R+EES  Y  QM  R LL
Sbjct: 370 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 429

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV--- 287
           P+   ++ +I    + G+ + A  ++   LD G  PN++ Y  L+  Y K  +I++V   
Sbjct: 430 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 489

Query: 288 --------------------------------LKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                                            ++  E+E     P +  Y+SLIS LC+
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCK 549

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               E+A      M    + P +  Y +L+    + G+ + A ++   ++++GL P+
Sbjct: 550 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPN 606



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 159/358 (44%), Gaps = 35/358 (9%)

Query: 50  LENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI 109
           L +  + + A +  L+    K G++Q   +++  +  +  +P +    +L+  +++ + +
Sbjct: 39  LSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAM 98

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
                + + M+   +  D   YS ++ A  K+R  ++A  V  EM +RG   N+  Y   
Sbjct: 99  ALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVL 158

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I   C  G +EEA    ++ME+ GL P   T+  LI G  K++R  E+ +  ++M   +L
Sbjct: 159 IAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAEL 218

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI----- 284
            P+   +  +I      GNA +A  M+   +  G  PN+ITY +L+ G  K G++     
Sbjct: 219 KPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 278

Query: 285 ------------------------------QEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                                         ++  +L  EME   ISP +  Y+ +I  LC
Sbjct: 279 LLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLC 338

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           Q G+ E+A    + M +  L P   +Y  L+  +  +GN + A  + ++M    + P 
Sbjct: 339 QSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 165/364 (45%), Gaps = 18/364 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  + + +   G   + + +  L+    KSD  + V   ++ ML+     +      
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 507

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L   G ++    +L  I      P V V +SLI  + +    E+   +L  M +K 
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ ++    K  ++  A  V+  +L +G   N   YT+ I   C+ G I  A 
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM   G+ P    +++L  GC+ A  +E+++   E+M  R    S S+FN ++   
Sbjct: 628 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGF 686

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++   +L + + +G  PN +T  ++I G ++ G++ EV  ++ E++ K+     
Sbjct: 687 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 746

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             ++SL   +   GK+                  +D+ + ++  H ++GN  KAL L + 
Sbjct: 747 RHFSSLFMDMINQGKIP-----------------LDVVDDMIRDHCKEGNLDKALMLRDV 789

Query: 364 MVSE 367
           +V++
Sbjct: 790 IVAK 793



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 35/224 (15%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V E M+  G S + + Y+T I AYC+  + + A  ++ EM   G      T+N+LI G  
Sbjct: 104 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG-- 161

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
                                            LC  G  ++A G      D G  P+  
Sbjct: 162 ---------------------------------LCRSGAVEEAFGFKKDMEDYGLVPDGF 188

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY  LI G  K     E   L  EM    + P +  Y +LI    + G  +EA K  K M
Sbjct: 189 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 248

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  + P    Y++LV    + G   +A  L ++MV +  +P T
Sbjct: 249 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 174/356 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF+++  SF ++I ++      D   R    ML     P    + TLIS LCK G+    
Sbjct: 419 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 478

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++  +   K        + +L+  + +  +++E   + K +L +  + D ++Y+ ++  
Sbjct: 479 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 538

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
               + L+ A +  +EM+KRG   +++ Y+  I       K+EEA     + +  G+ P 
Sbjct: 539 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 598

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++++I+GC KA+R EE   + ++MMS+ + P+   +N +IR  C  G    A  +  
Sbjct: 599 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 658

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG SPN  TY+ LI G +    ++E   L+ EM  + + P +  YT+LI    + G
Sbjct: 659 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 718

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++ + +   + M S ++ P    Y  ++G +   GN  +A  L  EM  +G+ P +
Sbjct: 719 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 774



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 174/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +  +G SL+  ++NTLI    K+ + D   R+ + ML      N+ +  ++I 
Sbjct: 373 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 432

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC      + +  +  +  +  SP   + T+LI  + +  +  + + L  + L K  + 
Sbjct: 433 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 492

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT   + +++   +   L+ A  + +E+L RG   +   Y T I   C   K++EA   +
Sbjct: 493 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 552

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   GLKP + T+++LI G     ++EE++ + +      +LP    ++ MI   C+ 
Sbjct: 553 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 612

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++        + K   PN + Y+HLI  Y + G +   L+L  +M++K ISP    Y
Sbjct: 613 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 672

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI  +    ++EEA   F+ M+   L P V  Y +L+  + + G   K   L  EM S
Sbjct: 673 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 732

Query: 367 EGLKPS 372
           + + P+
Sbjct: 733 KNVHPN 738



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 141/309 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +GF +   + N L+H + ++ + D  +RI + +L      +  +  TLIS  C   +L 
Sbjct: 487 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 546

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                LD +  +   P     + LI  +    ++EE +       R  M+ D   YS+++
Sbjct: 547 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 606

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K    E     ++EM+ +    N+ VY   I AYC  G++  A  L ++M++ G+ 
Sbjct: 607 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 666

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  LI+G +   R+EE+    E+M    L P+   +  +I    + G   +   +
Sbjct: 667 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 726

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     K   PN+ITY+ +IGGYA++G + E  +L  EM  K I P    Y   I    +
Sbjct: 727 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 786

Query: 316 CGKLEEADK 324
            G + EA K
Sbjct: 787 QGGVLEAFK 795



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 169/371 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ AF     + +RG   +LI+++ L+  +T++ R    + + + M +    PN      
Sbjct: 300 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 359

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +  + G L   +++ D +  K  S       +LI    +  + +    LLK ML   
Sbjct: 360 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 419

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +  +++ ++         +SAL    EML R  S    + TT I   C++GK  +A 
Sbjct: 420 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 479

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +  N G      T N L+ G  +A +++E+    ++++ R  +    ++N +I   
Sbjct: 480 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 539

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A   L   + +G  P+  TYS LI G     +++E ++ + + +   + P +
Sbjct: 540 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 599

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ +I   C+  + EE  ++F  M S ++ P   +Y  L+  +   G  + AL L E+
Sbjct: 600 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 659

Query: 364 MVSEGLKPSTS 374
           M  +G+ P+++
Sbjct: 660 MKHKGISPNSA 670



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 133/293 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + + +  RG  +  +S+NTLI       + D  +     M++    P+  T   LI 
Sbjct: 513 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 572

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L    +++  +   D        P V   + +I    + ER EEG      M+ KN+  
Sbjct: 573 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 632

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T+ Y+ ++ A  +   L  AL + E+M  +G S NS  YT+ I       ++EEA  L 
Sbjct: 633 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 692

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   GL+P    +  LI+G  K  ++ +      +M S+ + P+   +  MI      
Sbjct: 693 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 752

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           GN  +A+ +L    +KG  P+ ITY   I GY K+G + E  K   E  Y +I
Sbjct: 753 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAI 805



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 160/367 (43%), Gaps = 4/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFDV      +G S  +  F T I+   K  + +   +++  M E    PN  T  T+I 
Sbjct: 237 AFDVV----CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 292

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L   G+        +++  +   P +I  + L+  + + +RI +   +LK M +K    
Sbjct: 293 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 352

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y+ ++ + ++  +L  A+ + + M+ +G S  S  Y T I  YC+ G+ + A  L+
Sbjct: 353 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 412

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM + G      +F  +I         + +L +  +M+ R + P       +I  LC+ 
Sbjct: 413 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 472

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +    L+KGF  +  T + L+ G  + G++ E  ++  E+  +       +Y
Sbjct: 473 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 532

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LIS  C   KL+EA  +   M    L P    Y  L+          +A+   ++   
Sbjct: 533 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 592

Query: 367 EGLKPST 373
            G+ P  
Sbjct: 593 NGMLPDV 599



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 5/188 (2%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE--QMMSRKLLPSCSAFNEMIRRLCEC 246
           + N G+ P   T N+L+    +A   ++    CE   ++ + + P    F   I   C+ 
Sbjct: 206 LANKGMFPSKTTCNILLTSLVRANEFQKC---CEAFDVVCKGVSPDVYLFTTAINAFCKG 262

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  + +   + G +PN +T++ +I G    G   E      +M  + + PTL  Y
Sbjct: 263 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 322

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+  L +  ++ +A    K M      P V +Y +L+   +E G+  KA+ + + MVS
Sbjct: 323 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 382

Query: 367 EGLKPSTS 374
           +GL  ++S
Sbjct: 383 KGLSLTSS 390



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 59/135 (43%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A ++   ++ +G S +  ++ +LI  ++   R +    +++ M      PN      LI
Sbjct: 652 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 711

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
               K GQ+     +L  +H K   P  I  T +I    ++  + E   LL  M  K ++
Sbjct: 712 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 771

Query: 126 HDTIAYSLIVYAKVK 140
            D+I Y   +Y  +K
Sbjct: 772 PDSITYKEFIYGYLK 786


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 2/343 (0%)

Query: 5   EVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI-R 62
           + A D+ R + +RG  + +  ++ T+I    K  R D   +++  ML       EA +  
Sbjct: 531 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 590

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C  G+L T +   DR+  +  +  V     L+  +  + R  E   L++ M  K
Sbjct: 591 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 650

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++    K  N++ AL ++E M +RG  A    YT  I A  + G+++E 
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  E    G++P    +N LI   + +  I+ +     +M  +++ P    +N ++R 
Sbjct: 711 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 770

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G   +A  ++    ++G  P+ +TY+ LI GY+ +G++++ L++  EM  K  +PT
Sbjct: 771 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 830

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           L  Y +LI  LC+ G+ ++A+   K M  + + P    Y SL+
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 159/326 (48%), Gaps = 2/326 (0%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEE 107
           +L  +  PN  T  T+I+  C  G++Q  +D++  +  +   +P      ++I    +  
Sbjct: 505 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 564

Query: 108 RIEEGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           R++E + +   ML K  +  + + Y+ ++        L++AL+  + M++RG +     Y
Sbjct: 565 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 624

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              + A    G+  EA  L++EM   GL P   T+N+LI G  K   ++++L   E M  
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           R +  +   +  +I  L + G  ++ + +   A+ +G  P+ + Y+ LI  ++  G I  
Sbjct: 685 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 744

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             ++  EME K I+P    Y +L+  LC  G+++EA K    M    + P +  Y +L+ 
Sbjct: 745 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 804

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  KG+   AL +  EM+++G  P+
Sbjct: 805 GYSMKGDVKDALRIRNEMMNKGFNPT 830



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 163/357 (45%), Gaps = 2/357 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLD 82
           +++NT+I       R      I + M E     PN+ T  T+IS  CK G++   V + D
Sbjct: 515 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 574

Query: 83  RIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +  K    P  ++  +LI     + +++  ++   RM+ + +      Y+L+V+A    
Sbjct: 575 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 634

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  + EEM  +G + + F Y   I  +C+ G +++A  + + M   G++    T+
Sbjct: 635 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 694

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI   +K  +++E+    ++ + R + P    +N +I      GN  +A  ++     
Sbjct: 695 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 754

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +P+++TY+ L+ G    G + E  KL  EM  + I P L  Y +LIS     G +++
Sbjct: 755 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 814

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A +    M +    P +  Y +L+    + G    A ++ +EMV  G+ P  S   S
Sbjct: 815 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 871



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 135/268 (50%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG ++++ ++N L+H +    R    + + + M      P+  T   LI+  CK G ++
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 673

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++ + +  +     V+  T+LI  + ++ +++E   L    +R+ +  D + Y+ ++
Sbjct: 674 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 733

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +     N++ A  +  EM K+  + +   Y T +   C  G+++EA  L+ EM   G++
Sbjct: 734 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 793

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G +    ++++L    +MM++   P+   +N +I+ LC+ G    A  M
Sbjct: 794 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 853

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGE 283
           +   ++ G +P++ TY  LI G   E E
Sbjct: 854 VKEMVENGITPDDSTYISLIEGLTTEDE 881



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 37/257 (14%)

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKA 211
           E+L++    N+  Y T I  +C  G+++ A  +M+EM E  G+ P   T+  +I G  K 
Sbjct: 504 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563

Query: 212 KRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQA------------------ 252
            R++E++   ++M+++ ++ P    +N +I   C+ G    A                  
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623

Query: 253 ----------NGMLTLALD-------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
                     +G  T A +       KG +P+  TY+ LI G+ KEG +++ L+++  M 
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + +  T+  YT+LI +L + G+++E DK F       + P + +Y +L+  H   GN  
Sbjct: 684 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 743

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  +  EM  + + P 
Sbjct: 744 RAFEIMGEMEKKRIAPD 760



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 106/237 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  +G +  + ++N LI+   K         I+++M          T   LI 
Sbjct: 640 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 699

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL K GQ+Q    + D    +   P +++  +LI        I+    ++  M +K +  
Sbjct: 700 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 759

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  ++ A  + +EM +RG   +   Y T I  Y   G +++A  + 
Sbjct: 760 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 819

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            EM N G  P   T+N LI+G  K  + +++ +  ++M+   + P  S +  +I  L
Sbjct: 820 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 225 MSRKLLPSCSA-FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M R  LP C+  FN M+R LC  G   +A  +L     +   PN +TY+ +I G+   G 
Sbjct: 474 MFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR----QMPRPNAVTYNTVIAGFCSRGR 529

Query: 284 IQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIY 341
           +Q  L +  EM E   I+P    Y ++IS  C+ G+++EA K F  M +   V P   +Y
Sbjct: 530 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 589

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +L+G + ++G    AL   + MV  G+
Sbjct: 590 NALIGGYCDQGKLDTALLYRDRMVERGV 617


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 172/357 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S ++ ++N+ I+ + K  R     +    ML N   P+  +  TLI   C+ G L  
Sbjct: 333 KGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMK 392

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + D +      P ++   +L+  + ++  +E    L   M+ + +  D + Y+++V 
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              KM +L  A   ++EML  G   +S+ Y T I    + G    A  L +EM   G  P
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +N++++G  K   +EE+    ++M+S  ++P    +  +I    E G  ++   + 
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L KG +P+ +TY+ LI G+A +G ++     + EM+ K I P +  Y SLI+ LC+ 
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++++A  +F  M    + P    Y  L+  +   GN  +AL L ++M+  G++P +
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 168/382 (43%), Gaps = 35/382 (9%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N ++ ++   D       +Y+ M E    P   T  TL+ + CKGG++Q  +D+L  +  
Sbjct: 203 NRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQR 262

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           + C+P  +    LI  + ++   E+   L+  ML+  +      Y+ ++Y       L  
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL + EEM+ +G S     Y +FI   C+ G++ +A   + +M    L P   ++N LI 
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  +   + ++    +++ S  L P+   +N ++  LC  G  + A  +    +++G +P
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442

Query: 267 NEITYSHLIGG--------------------------YA---------KEGEIQEVLKLY 291
           + +TY+ L+ G                          YA         K G+      L 
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQ 502

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            EM  K   P L  Y  ++  LC+ G LEEA +  + M S  ++P    Y S++  HLE 
Sbjct: 503 EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLEN 562

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           G   K   +  EM+S+GL PS 
Sbjct: 563 GRLRKGREIFYEMLSKGLTPSV 584



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 167/367 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
             D+   +++RG + + +++N LI+ ++K    +    +   ML+     +  T   LI 
Sbjct: 253 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 312

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L   + + + +  K  SP V    S I  + +  R+ + M  L  ML  N++ 
Sbjct: 313 GYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y+ ++Y   ++ NL  A ++++E+           Y T +   C  G++E A  L 
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM N G+ P   T+ +L+ G  K   +  +  + ++M+   L     A+   I    + 
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +    L KGF P+ I Y+ ++ G  K G ++E  +L  +M    + P    Y
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TS+I +  + G+L +  + F  M S  L P V  Y  L+  H  KG   +A     EM  
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 367 EGLKPST 373
           +G+ P+ 
Sbjct: 613 KGILPNV 619



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 158/345 (45%), Gaps = 1/345 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++S+NTLI+   +       + ++  +     +P   T  TL+  LC+ G+L+    + 
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +  +P ++  T L+    +   +         ML + +  D+ AY+  +  ++K+
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +   A  + EEML +GF  +  +Y   +   C+ G +EEA+ L+Q+M + G+ P   T+
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I    +  R+ +      +M+S+ L PS   +  +I      G  ++A    +   +
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI G  K   + +    + EM  K I P   +YT LI+  C  G  +E
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           A   +K M    + P    + +L+   L K  K +A+   E ++ 
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLK-QLGKDCKLQAVRQLESLLD 716



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 119/241 (49%)

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
            L+++   K   +E  L V+++M+K   S +       +    +   + +A  + + M  
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+KP   T+N L++   K  ++++ L    +M  R   P+   +N +I  L + G  +Q
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A G++   L  G   +  TY+ LI GY  +G + E L L  EM  K  SPT+  Y S I 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+ G++ +A +    M +++L+P V  Y +L+  +   GN  KA  L +E+ S  L P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 372 S 372
           +
Sbjct: 408 T 408



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 20/234 (8%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC--------- 208
           GF  + FV+   +    +   +  A  +M+ + NA +       ++LI GC         
Sbjct: 110 GFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMH---RIVDVLIGGCVSSEVSVKI 166

Query: 209 --------AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
                   +K   +E+ LS  ++M+  +L P     N ++R L +     +A  +     
Sbjct: 167 LDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMG 226

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           + G  P  +TY+ L+  Y K G++Q+ L L  EM+ +  +P    Y  LI+ L + G+ E
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +A      M    L      Y  L+  +  KG  A+AL L EEMV +G  P+ +
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVA 340


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 179/372 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++AF++   +EQ      ++ +NT+I  + K    D    +++ M      PN  T  +L
Sbjct: 33  DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 92

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LC  G+      +L  +  ++ +P V   ++LI   ++E ++ E   L   M+++++
Sbjct: 93  ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 152

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               + YS ++        L+ A  ++E M+ +    +   Y T I  +C+Y ++EE   
Sbjct: 153 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 212

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + +EM   GL     T+N+LI+G  +A   + +    ++M+S  + P+   +N ++  LC
Sbjct: 213 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 272

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +          P   TY+ +I G  K G++++   L+  +  K + P + 
Sbjct: 273 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 332

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY ++IS  C+ G  EEAD  FK MK    +P    Y +L+   L  G++  +  L +EM
Sbjct: 333 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 392

Query: 365 VSEGLKPSTSYL 376
            S G     S +
Sbjct: 393 RSCGFAGDASTI 404



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 174/358 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    L+++  +++ + K    DL + +   M +    P      T+I  LCK   +  
Sbjct: 10  KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 69

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +++   +  K   P V+  +SLI  +    R  +   LL  M+ + +  D   +S ++ 
Sbjct: 70  ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 129

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A VK   L  A  +Y+EM+KR    +   Y++ I  +C + +++EA  + + M +    P
Sbjct: 130 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 189

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI+G  K KR+EE +    +M  R L+ +   +N +I+ L + G+   A  + 
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 249

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +  G  PN +TY+ L+ G  K G++++ + ++  ++   + PT+  Y  +I  +C+ 
Sbjct: 250 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 309

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           GK+E+    F  +    + P V  Y +++     KG+K +A  L +EM  +G  P++ 
Sbjct: 310 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 367



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 141/293 (48%)

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           ++DR+  K C P ++    ++  + +    +    LL +M +  +    + Y+ I+    
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K ++++ AL +++EM  +G   N   Y++ I   C YG+  +A+ L+ +M    + P   
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           TF+ LI+   K  ++ E+    ++M+ R + PS   ++ +I   C      +A  M    
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           + K   P+ +TY+ LI G+ K   ++E ++++ EM  + +      Y  LI  L Q G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + A + FK M S  + P +  Y +L+    + G   KA+ + E +    ++P+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 119/226 (52%)

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           + + + M+ +G   +   Y   +   C+ G  + A  L+ +ME   L+P    +N +I+G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K K ++++L+  ++M ++ + P+   ++ +I  LC  G    A+ +L+  +++  +P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
             T+S LI  + KEG++ E  KLY EM  +SI P++  Y+SLI+  C   +L+EA + F+
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            M S    P V  Y +L+    +     + + +  EM   GL  +T
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 119/260 (45%)

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           M L+ RM+ K    D + Y ++V    K  + + A  +  +M +        +Y T I  
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+Y  +++A  L +EME  G++P   T++ LI       R  ++      M+ RK+ P 
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              F+ +I    + G   +A  +    + +   P+ +TYS LI G+     + E  +++ 
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            M  K   P +  Y +LI   C+  ++EE  + F+ M    LV     Y  L+    + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 353 NKAKALHLCEEMVSEGLKPS 372
           +   A  + +EMVS+G+ P+
Sbjct: 241 DCDMAQEIFKEMVSDGVPPN 260



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 96/200 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   +V R + QRG   + +++N LI  + ++   D+   I++ M+ +   PN  T  TL
Sbjct: 208 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G+L+  + + + +   +  P +     +I  + +  ++E+G  L   +  K +
Sbjct: 268 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 327

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D +AY+ ++    +  + E A  +++EM + G   NS  Y T I A    G  E +  
Sbjct: 328 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 387

Query: 185 LMQEMENAGLKPYDETFNLL 204
           L++EM + G      T  L+
Sbjct: 388 LIKEMRSCGFAGDASTIGLV 407



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%)

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           + L   M  K   P L  Y  +++ LC+ G  + A      M+   L PGV IY +++  
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
             +  +   AL+L +EM ++G++P+     S  +C
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 95


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 169/350 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++NTLI  +    R D    +   ML     P+  T   L+ A CK    +  V +LD +
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K C+P ++    ++  I QE R+++ M  LK +       +T++Y++++         
Sbjct: 214 RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERW 273

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  +  EM ++G   N   +   I   C  G +E A  ++ ++   G  P   ++N +
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +    K K+++ ++++ E M+S    P   ++N ++  LC  G    A  +L    DKG 
Sbjct: 334 LHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P  I+Y+ +I G  K G+ +E L+L  EM  K + P +  Y+++ S LC+ G++EEA K
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIK 453

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            F  ++   + P   +Y +++    ++     A+ L   MVS G  P+ S
Sbjct: 454 AFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNES 503



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 142/288 (49%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  + L   G   + +S+N ++  +  ++R +   ++   M    R PN  T   LIS
Sbjct: 241 AMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLIS 300

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G ++  +++LD+I    C+P  +    ++    ++++++  M  ++ M+      
Sbjct: 301 FLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYP 360

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y+ ++ A  +   +++A+ +  ++  +G +     Y T I    + GK EEA  L+
Sbjct: 361 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELL 420

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   GL+P   T++ +  G  +  RIEE++    ++    + P+   +N ++  LC+ 
Sbjct: 421 NEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKR 480

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
                A  + T  +  G  PNE TY+ LI G A EG ++E  ++  E+
Sbjct: 481 RATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 114/228 (50%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A ++   + + G + + +S+N ++H   K  + D      + M+ +  YP+  +  
Sbjct: 307 LVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYN 366

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALC+GG++   V++L ++  K C+P++I   ++I  + +  + EE + LL  M+ K
Sbjct: 367 TLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTK 426

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS I     +   +E A+  + ++   G   N+ +Y   +   C+      A
Sbjct: 427 GLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSA 486

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             L   M + G  P + T+ +LIEG A    ++E+     ++ SR ++
Sbjct: 487 IDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   +  YC  G+++ A  L+  M    ++P   T+N LI G     R + +L+  + M+
Sbjct: 123 YNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDML 179

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
            R  +P    +  ++   C+    KQA  +L    DKG +P+ +TY+ ++ G  +EG + 
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVD 239

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + ++    +      P   +Y  ++  LC   + E+A+K    M      P V  +  L+
Sbjct: 240 DAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLI 299

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
                +G    A+ + +++   G  P++
Sbjct: 300 SFLCRRGLVEPAMEILDQIPKYGCTPNS 327


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 178/353 (50%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDM 80
           S++ FN L+  + K ++ DLV  + + M +N+R   +  +   LI+  C+  QL   + +
Sbjct: 63  SIVEFNKLLSAIAKMNKFDLVISLGERM-QNLRISYDLYSYNILINCFCRRSQLPLALAV 121

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++  +SL+      +RI E + L+ +M       +T+ ++ +++    
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A+ + + M+ RG   + F Y T +   C+ G I+ A  L+++ME   ++     
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +  +I+     K + ++L+   +M ++ + P+   +N +IR LC  G    A+ +L+  +
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  +PN +T+S LI  + KEG++ E  KLY EM  +SI P +  Y+SLI+  C   +L+
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA   F++M S    P V  Y +L+    +     + + L  EM   GL  +T
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 414



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 174/357 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG    L ++ T+++ + K    DL   + + M +     +     T+I ALC    +  
Sbjct: 198 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 257

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +++   +  K   P V+   SLI  +    R  +   LL  M+ + +  + + +S ++ 
Sbjct: 258 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 317

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A VK   L  A  +Y+EM+KR    + F Y++ I  +C + +++EA  + + M +    P
Sbjct: 318 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 377

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI+G  KAKR+EE +    +M  R L+ +   +N +I+ L + G+   A  + 
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +  G  P+ ITYS L+ G  K G++++ L ++  ++   + P +  Y  +I  +C+ 
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 497

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           GK+E+    F  +    + P V IY +++     KG K +A  L  EM  +G  P++
Sbjct: 498 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 554



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 169/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F++   +   ++    S  L S+N LI+   +  +  L   +   M++    P+  T
Sbjct: 77  MNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 136

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  +   +LI  +    +  E + L+ RM+
Sbjct: 137 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 196

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +    D   Y  +V    K  +++ AL + ++M K    A+  +YTT I A C Y  + 
Sbjct: 197 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 256

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  EM+N G++P   T+N LI       R  ++      M+ RK+ P+   F+ +I
Sbjct: 257 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 316

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TYS LI G+     + E   ++  M  K   
Sbjct: 317 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 376

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI   C+  ++EE  + F+ M    LV     Y +L+    + G+   A  +
Sbjct: 377 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 436

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P 
Sbjct: 437 FKKMVSDGVPPD 448



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 168/367 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+   +++ ++L++      R      +   M      PN  T  TLI
Sbjct: 117 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 176

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L    +    V ++DR+  + C P +    +++  + +   I+  + LLK+M +  + 
Sbjct: 177 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 236

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ I+ A    +N+  AL ++ EM  +G   N   Y + I   C YG+  +A+ L
Sbjct: 237 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 296

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M    + P   TF+ LI+   K  ++ E+    ++M+ R + P    ++ +I   C 
Sbjct: 297 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 356

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  M  L + K   PN +TY+ LI G+ K   ++E ++L+ EM  + +      
Sbjct: 357 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 416

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI  L Q G  + A K FK M S  + P +  Y  L+    + G   KAL + E + 
Sbjct: 417 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 476

Query: 366 SEGLKPS 372
              ++P 
Sbjct: 477 KSKMEPD 483



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 155/329 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   ++ +G   +++++N+LI  +    R     R+   M+E    PN  T   LI 
Sbjct: 258 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 317

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K G+L     + D +  +   P +   +SLI      +R++E   + + M+ K+   
Sbjct: 318 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 377

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K + +E  + ++ EM +RG   N+  Y T I    + G  + A  + 
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G+ P   T+++L++G  K  ++E++L   E +   K+ P    +N MI  +C+ 
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 497

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  +    +      KG  PN I Y+ +I G+ ++G  +E   L+ EM+     P    Y
Sbjct: 498 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 557

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            +LI +  + G    + +  K M+S   V
Sbjct: 558 NTLIRARLRDGDKAASAELIKEMRSCGFV 586



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 140/301 (46%), Gaps = 2/301 (0%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   VD+   +   R  P ++    L+  I +  + +  + L +RM    + +D  +Y+
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL V  +M+K G+  +    ++ +  YC   +I EA  L+ +M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   TFN LI G     +  E+++  ++M++R   P    +  ++  LC+ G+   A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             +L   ++KG    + + Y+ +I        + + L L+ EM+ K I P +  Y SLI 
Sbjct: 224 LSLLK-KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+  +A +    M    + P V  + +L+   +++G   +A  L +EM+   + P
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342

Query: 372 S 372
            
Sbjct: 343 D 343



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 123/271 (45%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           ++ + ++++ + L   M++   +   + ++ ++ A  KM   +  + + E M     S +
Sbjct: 39  VLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD 98

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
            + Y   I  +C   ++  A  ++ +M   G +P   T + L+ G    KRI E+++  +
Sbjct: 99  LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 158

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           QM   +  P+   FN +I  L     A +A  ++   + +G  P+  TY  ++ G  K G
Sbjct: 159 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 218

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +I   L L  +ME   I   +  YT++I +LC    + +A   F  M +  + P V  Y 
Sbjct: 219 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           SL+      G  + A  L  +M+   + P+ 
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNV 309



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 114/260 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R     + ++++LI+     DR D    +++ M+    +PN  T  TLI   CK  +++
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  +      +   +LI  + Q    +    + K+M+   +  D I YS+++
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 456

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   LE ALVV+E + K     + + Y   I   C+ GK+E+   L   +   G+K
Sbjct: 457 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 516

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  +I G  +    EE+ +   +M     LP+   +N +IR     G+   +  +
Sbjct: 517 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 576

Query: 256 LTLALDKGFSPNEITYSHLI 275
           +      GF  +  T S +I
Sbjct: 577 IKEMRSCGFVGDASTISMVI 596



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 35/239 (14%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   ++ R + QRG   + +++NTLI  + ++   D+  +I++ M+ +   P+  T   L
Sbjct: 396 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 455

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G+L                                   E+ +V+ + + +  M
Sbjct: 456 LDGLCKYGKL-----------------------------------EKALVVFEYLQKSKM 480

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y++++    K   +E    ++  +  +G   N  +YTT I  +C  G  EEA+ 
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 540

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           L +EM+  G  P   T+N LI    +      S    ++M S   +   S  + +I  L
Sbjct: 541 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 168/355 (47%), Gaps = 2/355 (0%)

Query: 1   MRLFEVAFDVCRYLE--QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNE 58
           +R  E+      YLE    G+   +  FN L+H   K+        ++  + +    P  
Sbjct: 224 LRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTV 283

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            +  TLIS  CK G ++    +   +  +   P V   ++LI  + +E R++EG +L   
Sbjct: 284 VSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDE 343

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M  + ++ + + ++ ++  + K   ++ AL  ++ ML +G   +   Y   I   C+ G 
Sbjct: 344 MCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 403

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++EA  L+ EM  +GLKP   TF  LI+GC K   +E +L    +M+   +     AF  
Sbjct: 404 LKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTA 463

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  LC  G    A  MLT  L  GF P++ TY+ +I  + K+G+++   KL  EM+   
Sbjct: 464 LISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDG 523

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
             P +  Y +L++ LC+ G+++ A      M +  + P    Y  L+  H + G+
Sbjct: 524 HVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGS 578



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 151/330 (45%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           W +Y  +L++   P       L+   CK G +     + D I  +   P V+   +LI  
Sbjct: 233 WALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISG 292

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
             +   +EEG  L   M  + +  D   +S ++    K   L+   ++++EM  RG   N
Sbjct: 293 CCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPN 352

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              +TT I   C+ GK++ A    Q M   G++P   T+N LI G  K   ++E+     
Sbjct: 353 GVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 412

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M +  L P    F  +I   C+ G+ + A  +    +++G   +++ ++ LI G  +EG
Sbjct: 413 EMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREG 472

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            + +  ++  +M      P  P YT +I   C+ G ++   K  K M+S   VPGV  Y 
Sbjct: 473 RVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYN 532

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+    ++G    A  L + M++ G+ P+
Sbjct: 533 ALMNGLCKQGQMKNAKMLLDAMLNVGVAPN 562



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 145/307 (47%), Gaps = 3/307 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E  F +   +E  G    + +F+ LI+ + K  R D    ++  M      PN  T  TL
Sbjct: 300 EEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTL 359

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CKGG++   +     +  +   P ++   +LI  + +   ++E   L+  M    +
Sbjct: 360 IDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGL 419

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I ++ ++    K  ++ESAL +   M++ G   +   +T  I   C  G++ +A  
Sbjct: 420 KPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGR 479

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++ +M +AG KP D T+ ++I+   K   ++      ++M S   +P    +N ++  LC
Sbjct: 480 MLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLC 539

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  K A  +L   L+ G +PN+ITY+ L+ G++K G   +V     E   K +     
Sbjct: 540 KQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSE---KGLVTDYA 596

Query: 305 AYTSLIS 311
           +YT+L++
Sbjct: 597 SYTALVN 603



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 2/234 (0%)

Query: 139 VKMR--NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           V++R   +E +  +Y E+L  G+    + +   +  +C+ G +  A  +  E+   GL+P
Sbjct: 222 VRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRP 281

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              +FN LI GC K+  +EE       M S  + P    F+ +I  LC+ G   + + + 
Sbjct: 282 TVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLF 341

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G  PN +T++ LI G  K G++   LK +  M  + + P L  Y +LI+ LC+ 
Sbjct: 342 DEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV 401

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           G L+EA +    M +  L P    + +L+    + G+   AL +   MV EG++
Sbjct: 402 GDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIE 455



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 101/195 (51%)

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +IE +  L  E+ ++G  P    FN+L+ G  KA  +  +    +++  R L P+  +FN
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I   C+ G+ ++   +  +   +G  P+  T+S LI G  KEG + E   L+ EM  +
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P    +T+LI   C+ GK++ A K F++M +  + P +  Y +L+    + G+  +A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 358 LHLCEEMVSEGLKPS 372
             L  EM + GLKP 
Sbjct: 408 RRLVNEMTASGLKPD 422


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 174/356 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF+++  SF ++I ++      D   R    ML     P    + TLIS LCK G+    
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++  +   K        + +L+  + +  +++E   + K +L +  + D ++Y+ ++  
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
               + L+ A +  +EM+KRG   +++ Y+  I       K+EEA     + +  G+ P 
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++++I+GC KA+R EE   + ++MMS+ + P+   +N +IR  C  G    A  +  
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG SPN  TY+ LI G +    ++E   L+ EM  + + P +  YT+LI    + G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++ + +   + M S ++ P    Y  ++G +   GN  +A  L  EM  +G+ P +
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 174/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +  +G SL+  ++NTLI    K+ + D   R+ + ML      N+ +  ++I 
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC      + +  +  +  +  SP   + T+LI  + +  +  + + L  + L K  + 
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT   + +++   +   L+ A  + +E+L RG   +   Y T I   C   K++EA   +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   GLKP + T+++LI G     ++EE++ + +      +LP    ++ MI   C+ 
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++        + K   PN + Y+HLI  Y + G +   L+L  +M++K ISP    Y
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI  +    ++EEA   F+ M+   L P V  Y +L+  + + G   K   L  EM S
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743

Query: 367 EGLKPS 372
           + + P+
Sbjct: 744 KNVHPN 749



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 141/309 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +GF +   + N L+H + ++ + D  +RI + +L      +  +  TLIS  C   +L 
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                LD +  +   P     + LI  +    ++EE +       R  M+ D   YS+++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K    E     ++EM+ +    N+ VY   I AYC  G++  A  L ++M++ G+ 
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  LI+G +   R+EE+    E+M    L P+   +  +I    + G   +   +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     K   PN+ITY+ +IGGYA++G + E  +L  EM  K I P    Y   I    +
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797

Query: 316 CGKLEEADK 324
            G + EA K
Sbjct: 798 QGGVLEAFK 806



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 169/371 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ AF     + +RG   +LI+++ L+  +T++ R    + + + M +    PN      
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +  + G L   +++ D +  K  S       +LI    +  + +    LLK ML   
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +  +++ ++         +SAL    EML R  S    + TT I   C++GK  +A 
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +  N G      T N L+ G  +A +++E+    ++++ R  +    ++N +I   
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A   L   + +G  P+  TYS LI G     +++E ++ + + +   + P +
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ +I   C+  + EE  ++F  M S ++ P   +Y  L+  +   G  + AL L E+
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670

Query: 364 MVSEGLKPSTS 374
           M  +G+ P+++
Sbjct: 671 MKHKGISPNSA 681



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 133/293 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + + +  RG  +  +S+NTLI       + D  +     M++    P+  T   LI 
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L    +++  +   D        P V   + +I    + ER EEG      M+ KN+  
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T+ Y+ ++ A  +   L  AL + E+M  +G S NS  YT+ I       ++EEA  L 
Sbjct: 644 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   GL+P    +  LI+G  K  ++ +      +M S+ + P+   +  MI      
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           GN  +A+ +L    +KG  P+ ITY   I GY K+G + E  K   E  Y +I
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAI 816



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 160/367 (43%), Gaps = 4/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFDV      +G S  +  F T I+   K  + +   +++  M E    PN  T  T+I 
Sbjct: 248 AFDVV----CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 303

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L   G+        +++  +   P +I  + L+  + + +RI +   +LK M +K    
Sbjct: 304 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y+ ++ + ++  +L  A+ + + M+ +G S  S  Y T I  YC+ G+ + A  L+
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM + G      +F  +I         + +L +  +M+ R + P       +I  LC+ 
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +    L+KGF  +  T + L+ G  + G++ E  ++  E+  +       +Y
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LIS  C   KL+EA  +   M    L P    Y  L+          +A+   ++   
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603

Query: 367 EGLKPST 373
            G+ P  
Sbjct: 604 NGMLPDV 610



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 5/188 (2%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE--QMMSRKLLPSCSAFNEMIRRLCEC 246
           + N G+ P   T N+L+    +A   ++    CE   ++ + + P    F   I   C+ 
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKC---CEAFDVVCKGVSPDVYLFTTAINAFCKG 273

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  + +   + G +PN +T++ +I G    G   E      +M  + + PTL  Y
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+  L +  ++ +A    K M      P V +Y +L+   +E G+  KA+ + + MVS
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393

Query: 367 EGLKPSTS 374
           +GL  ++S
Sbjct: 394 KGLSLTSS 401


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 178/376 (47%), Gaps = 14/376 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + + ++++    + +++  L+  + K+ R D    + + M+E    P   T   +I 
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 67  ALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK----R 118
            L K G+++     +VDML    G  C P   V T+LI  + +  + EE   L K    R
Sbjct: 121 GLSKAGRVEEARRIFVDML----GNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANAR 176

Query: 119 MLRKNMIHDTIAYSLIVYAKVKM-RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
                 + D + Y+ ++    K  R LE+  V  +E ++RGF  ++  YT+ I   C+ G
Sbjct: 177 KHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLG 236

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++EE      EM N G +P   T+  LI+G  KAK I ++     QM+    + S   +N
Sbjct: 237 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 296

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  LC+ G   +A        ++G     +TYS L+ G+  EG +   ++L+  M  +
Sbjct: 297 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 356

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAK 356
              P L +Y  +I  LC+ GKL +A  YF+ +    L P V  + + + G+       + 
Sbjct: 357 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSD 416

Query: 357 ALHLCEEMVSEGLKPS 372
            + L E MVS+G  P+
Sbjct: 417 GVELFESMVSQGTSPN 432



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 172/358 (48%), Gaps = 5/358 (1%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S  +++F  +I+ + +  R D  + + +  +     P+  T    I  LCK  ++     
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +L ++  K+C P  +  T+L+  +++  R++E M +L++M+ K        Y++++    
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM----ENAGLK 195
           K   +E A  ++ +ML  G   ++FVYT  I   C+ GK EEA  L +E      +A   
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 196 PYDETFNLLIEGCAKAKRIEESLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           P   T+  LI+G  KA RI E+   + ++ + R  +P    +  +I  LC+ G  ++   
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                 ++G+ P+ +TY+ LI G+ K   I +  ++Y +M       +   Y  ++  LC
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + G++ EA   F  M+    V  V  Y +L+     +GN + A+ L   M+  G +P+
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 177/410 (43%), Gaps = 41/410 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + ++G S +L ++  +I  ++K+ R +   RI+  ML N   P+      LI 
Sbjct: 96  AMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIK 155

Query: 67  ALCKGGQLQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEG-MVLLKRMLR 121
            LCK G+ +     Y +   R H     P V+  TSLI  + +  RI E   V     + 
Sbjct: 156 GLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVE 215

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +  I D + Y+ I+    K+  +E     + EM  RG+  ++  Y   I  + +   I +
Sbjct: 216 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 275

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A+ + ++M  +G      T+N++++G  KA R+ E+ +    M  R  + +   ++ ++ 
Sbjct: 276 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 335

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE------------------ 283
             C  GN   A  +    LD+G  PN ++Y+ +I G  + G+                  
Sbjct: 336 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 395

Query: 284 ------------------IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
                             + + ++L+  M  +  SP L +Y+ L+  +C+ G LE A + 
Sbjct: 396 DVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEI 455

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           F+ M S  + P V ++ +L+      G   +AL +  E+       + SY
Sbjct: 456 FREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSY 505



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 159/326 (48%), Gaps = 3/326 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQ-HMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
            ++++ +LI  + K+ R     +++    +E    P+  T  ++I  LCK G+++   + 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
              +  +   P  +   +LI   ++ + I +   + ++ML+   +  T+ Y++I+    K
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              +  A   +  M +RG  A    Y+  +  +C  G +  A  L + M + G +P   +
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE-CGNAKQANGMLTLA 259
           +N++I G  +A ++ ++  Y E+++ R+L P    FN  +  LC+          +    
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           + +G SPN  +YS L+ G  + G ++  L+++ EM  + ++P +  + +LI  LC  G++
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRV 484

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLV 345
           +EA + F+ ++  S  P    Y SL+
Sbjct: 485 DEALEVFRELERRS-APDAWSYWSLL 509



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 142/290 (48%), Gaps = 5/290 (1%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           CSP ++  T +I  + +E+R++E   +L+R +R     D + Y++ +    K   ++ A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            + ++M ++     +  YT  +    + G+++EA  ++++M   G  P  +T+ ++I+G 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS--- 265
           +KA R+EE+      M+     P    +  +I+ LC+ G  ++A  +   A  +      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 266 -PNEITYSHLIGGYAKEGEIQEVLKLY-YEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            P+ +TY+ LI G  K G I E  +++  E   +   P    YTS+I  LC+ G++EE  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + F  M++    P    Y +L+   ++     KA  +  +M+  G   ST
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST 292


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 189/382 (49%), Gaps = 11/382 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M +    PN  +  
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166

Query: 63  TLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            L+  LC   + Q  +++L  +   G  C P V+  T++I    +E  +++       ML
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + ++ + + YS I+ A  K + ++ A+ V   M+K G   N   Y + +  YC  G+ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA   +++M + G++P   T+N L++   K  R  E+    + M  R L P  + +  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +     G   + +G+L L +  G  PN   +S LI  YAK+G++ + + ++ +M  + ++
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGNKAK 356
           P    Y ++I  LC+ G++E+A +YF+ M    L PG  +Y SL  IH     +K +KAK
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL--IHSLCIFDKWDKAK 464

Query: 357 ALHLCEEMVSEGLKPSTSYLCS 378
            L L  EM+  G+   T +  S
Sbjct: 465 ELIL--EMLDRGICLDTIFFNS 484



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 167/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   ++++++++I  + K+   D    +   M++N   PN  T  +++   C  GQ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++H     P V+   SL+  + +  R  E   +   M ++ +  +   Y  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   N +V++  I AY + GK+++A  +  +M   GL 
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  +I    K+ R+E+++ Y EQM+  +L P    +N +I  LC      +A  +
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   + I ++ +I  + KEG + E  KL+  M    + P +  Y++LI   C 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA K    M S  + P    Y +L+  + +      AL L  EM S G+ P 
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 155/327 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+ LI    K  + D    ++  M +    P+  T  T+I  LCK G+++  +   +++ 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +R SP  IV  SLI  +   ++ ++   L+  ML + +  DTI ++ I+ +  K   + 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   +   Y+T I  YC  GK++EA  L+  M + G+KP   T+N LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+E++L    +M S  + P    +N +++ L +      A  +     + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKG 352
           F  + ++ LVP V  Y  +    +E+G
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 147/320 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G    ++++N+L+  + K+ R     +++  M +    P   T  TL+ 
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V + LI    ++ ++++ M++  +M ++ +  
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT+ Y  ++    K   +E A+  +E+M+    S  + VY + I + C + K ++A  L+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I+   K  R+ ES    + M+   + P    ++ +I   C  
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L   +  G  P+ +TY+ LI GY K   +++ L L+ EME   +SP +  Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 307 TSLISSLCQCGKLEEADKYF 326
             ++  L Q  +   A + +
Sbjct: 588 NIILQGLFQTRRTAAAKELY 607



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 158/359 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++ TL+           +  +   M+ N  +PN      LI A  K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +  ++  +  +P  +   ++I  + +  R+E+ M   ++M+ + +    I Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++++       + A  +  EML RG   ++  + + I ++C+ G++ E+  L   M   G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T++ LI+G   A +++E+      M+S  + P C  +N +I   C+    + A 
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G SP+ ITY+ ++ G  +        +LY  +        L  Y  ++  L
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+    +EA + F+ +    L      +  ++G  L+ G   +A  L   + + GL P 
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 10/331 (3%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  RY EQ      S   I +N+LIH +   D+ D    +   ML+     +     ++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P +I  ++LI       +++E   LL  M+  
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVK---PDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            M  D + Y+ ++    K+  +E ALV++ EM   G S +   Y   +    +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  P+  TYS +     ++G ++E+  L+  ME    +  
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 303 LPAYTSLISSLCQCGKLEEADKY-FKIMKSH 332
                S++  L Q G +  A  Y F I + H
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 174/356 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF+++  SF ++I ++      D   R    ML     P    + TLIS LCK G+    
Sbjct: 443 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++  +   K        + +L+  + +  +++E   + K +L +  + D ++Y+ ++  
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
               + L+ A +  +EM+KRG   +++ Y+  I       K+EEA     + +  G+ P 
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++++I+GC KA+R EE   + ++MMS+ + P+   +N +IR  C  G    A  +  
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG SPN  TY+ LI G +    ++E   L+ EM  + + P +  YT+LI    + G
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++ + +   + M S ++ P    Y  ++G +   GN  +A  L  EM  +G+ P +
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 174/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +  +G SL+  ++NTLI    K+ + D   R+ + ML      N+ +  ++I 
Sbjct: 397 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 456

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC      + +  +  +  +  SP   + T+LI  + +  +  + + L  + L K  + 
Sbjct: 457 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 516

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT   + +++   +   L+ A  + +E+L RG   +   Y T I   C   K++EA   +
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   GLKP + T+++LI G     ++EE++ + +      +LP    ++ MI   C+ 
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++        + K   PN + Y+HLI  Y + G +   L+L  +M++K ISP    Y
Sbjct: 637 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI  +    ++EEA   F+ M+   L P V  Y +L+  + + G   K   L  EM S
Sbjct: 697 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 756

Query: 367 EGLKPS 372
           + + P+
Sbjct: 757 KNVHPN 762



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 141/309 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +GF +   + N L+H + ++ + D  +RI + +L      +  +  TLIS  C   +L 
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                LD +  +   P     + LI  +    ++EE +       R  M+ D   YS+++
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K    E     ++EM+ +    N+ VY   I AYC  G++  A  L ++M++ G+ 
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  LI+G +   R+EE+    E+M    L P+   +  +I    + G   +   +
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 750

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     K   PN+ITY+ +IGGYA++G + E  +L  EM  K I P    Y   I    +
Sbjct: 751 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810

Query: 316 CGKLEEADK 324
            G + EA K
Sbjct: 811 QGGVLEAFK 819



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 169/371 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ AF     + +RG   +LI+++ L+  +T++ R    + + + M +    PN      
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 383

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +  + G L   +++ D +  K  S       +LI    +  + +    LLK ML   
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +  +++ ++         +SAL    EML R  S    + TT I   C++GK  +A 
Sbjct: 444 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 503

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +  N G      T N L+ G  +A +++E+    ++++ R  +    ++N +I   
Sbjct: 504 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 563

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A   L   + +G  P+  TYS LI G     +++E ++ + + +   + P +
Sbjct: 564 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 623

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ +I   C+  + EE  ++F  M S ++ P   +Y  L+  +   G  + AL L E+
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 683

Query: 364 MVSEGLKPSTS 374
           M  +G+ P+++
Sbjct: 684 MKHKGISPNSA 694



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 133/293 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + + +  RG  +  +S+NTLI       + D  +     M++    P+  T   LI 
Sbjct: 537 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 596

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L    +++  +   D        P V   + +I    + ER EEG      M+ KN+  
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T+ Y+ ++ A  +   L  AL + E+M  +G S NS  YT+ I       ++EEA  L 
Sbjct: 657 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 716

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   GL+P    +  LI+G  K  ++ +      +M S+ + P+   +  MI      
Sbjct: 717 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 776

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           GN  +A+ +L    +KG  P+ ITY   I GY K+G + E  K   E  Y +I
Sbjct: 777 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAI 829



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 160/367 (43%), Gaps = 4/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFDV      +G S  +  F T I+   K  + +   +++  M E    PN  T  T+I 
Sbjct: 261 AFDVV----CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 316

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L   G+        +++  +   P +I  + L+  + + +RI +   +LK M +K    
Sbjct: 317 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 376

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y+ ++ + ++  +L  A+ + + M+ +G S  S  Y T I  YC+ G+ + A  L+
Sbjct: 377 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 436

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM + G      +F  +I         + +L +  +M+ R + P       +I  LC+ 
Sbjct: 437 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 496

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +    L+KGF  +  T + L+ G  + G++ E  ++  E+  +       +Y
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 556

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LIS  C   KL+EA  +   M    L P    Y  L+          +A+   ++   
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616

Query: 367 EGLKPST 373
            G+ P  
Sbjct: 617 NGMLPDV 623



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 5/188 (2%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE--QMMSRKLLPSCSAFNEMIRRLCEC 246
           + N G+ P   T N+L+    +A   ++    CE   ++ + + P    F   I   C+ 
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKC---CEAFDVVCKGVSPDVYLFTTAINAFCKG 286

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  + +   + G +PN +T++ +I G    G   E      +M  + + PTL  Y
Sbjct: 287 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 346

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+  L +  ++ +A    K M      P V +Y +L+   +E G+  KA+ + + MVS
Sbjct: 347 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406

Query: 367 EGLKPSTS 374
           +GL  ++S
Sbjct: 407 KGLSLTSS 414


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 2/343 (0%)

Query: 5   EVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI-R 62
           + A D+ R + +RG  + +  ++ T+I    K  R D   +++  ML       EA +  
Sbjct: 536 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 595

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C  G+L T +   DR+  +  +  V     L+  +  + R  E   L++ M  K
Sbjct: 596 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 655

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++    K  N++ AL ++E M +RG  A    YT  I A  + G+++E 
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  E    G++P    +N LI   + +  I+ +     +M  +++ P    +N ++R 
Sbjct: 716 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 775

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G   +A  ++    ++G  P+ +TY+ LI GY+ +G++++ L++  EM  K  +PT
Sbjct: 776 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 835

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           L  Y +LI  LC+ G+ ++A+   K M  + + P    Y SL+
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 159/326 (48%), Gaps = 2/326 (0%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEE 107
           +L  +  PN  T  T+I+  C  G++Q  +D++  +  +   +P      ++I    +  
Sbjct: 510 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 569

Query: 108 RIEEGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           R++E + +   ML K  +  + + Y+ ++        L++AL+  + M++RG +     Y
Sbjct: 570 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 629

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              + A    G+  EA  L++EM   GL P   T+N+LI G  K   ++++L   E M  
Sbjct: 630 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           R +  +   +  +I  L + G  ++ + +   A+ +G  P+ + Y+ LI  ++  G I  
Sbjct: 690 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 749

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             ++  EME K I+P    Y +L+  LC  G+++EA K    M    + P +  Y +L+ 
Sbjct: 750 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 809

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  KG+   AL +  EM+++G  P+
Sbjct: 810 GYSMKGDVKDALRIRNEMMNKGFNPT 835



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 163/357 (45%), Gaps = 2/357 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLD 82
           +++NT+I       R      I + M E     PN+ T  T+IS  CK G++   V + D
Sbjct: 520 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 579

Query: 83  RIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +  K    P  ++  +LI     + +++  ++   RM+ + +      Y+L+V+A    
Sbjct: 580 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 639

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  + EEM  +G + + F Y   I  +C+ G +++A  + + M   G++    T+
Sbjct: 640 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 699

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI   +K  +++E+    ++ + R + P    +N +I      GN  +A  ++     
Sbjct: 700 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 759

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +P+++TY+ L+ G    G + E  KL  EM  + I P L  Y +LIS     G +++
Sbjct: 760 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 819

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A +    M +    P +  Y +L+    + G    A ++ +EMV  G+ P  S   S
Sbjct: 820 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 876



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 135/268 (50%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG ++++ ++N L+H +    R    + + + M      P+  T   LI+  CK G ++
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 678

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++ + +  +     V+  T+LI  + ++ +++E   L    +R+ +  D + Y+ ++
Sbjct: 679 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +     N++ A  +  EM K+  + +   Y T +   C  G+++EA  L+ EM   G++
Sbjct: 739 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G +    ++++L    +MM++   P+   +N +I+ LC+ G    A  M
Sbjct: 799 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 858

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGE 283
           +   ++ G +P++ TY  LI G   E E
Sbjct: 859 VKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 37/257 (14%)

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKA 211
           E+L++    N+  Y T I  +C  G+++ A  +M+EM E  G+ P   T+  +I G  K 
Sbjct: 509 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568

Query: 212 KRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQA------------------ 252
            R++E++   ++M+++ ++ P    +N +I   C+ G    A                  
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628

Query: 253 ----------NGMLTLALD-------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
                     +G  T A +       KG +P+  TY+ LI G+ KEG +++ L+++  M 
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + +  T+  YT+LI +L + G+++E DK F       + P + +Y +L+  H   GN  
Sbjct: 689 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 748

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  +  EM  + + P 
Sbjct: 749 RAFEIMGEMEKKRIAPD 765



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 106/237 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  +G +  + ++N LI+   K         I+++M          T   LI 
Sbjct: 645 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 704

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL K GQ+Q    + D    +   P +++  +LI        I+    ++  M +K +  
Sbjct: 705 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 764

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  ++ A  + +EM +RG   +   Y T I  Y   G +++A  + 
Sbjct: 765 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 824

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            EM N G  P   T+N LI+G  K  + +++ +  ++M+   + P  S +  +I  L
Sbjct: 825 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 225 MSRKLLPSCSA-FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M R  LP C+  FN M+R LC  G   +A  +L     +   PN +TY+ +I G+   G 
Sbjct: 479 MFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR----QMPRPNAVTYNTVIAGFCSRGR 534

Query: 284 IQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIY 341
           +Q  L +  EM E   I+P    Y ++IS  C+ G+++EA K F  M +   V P   +Y
Sbjct: 535 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 594

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +L+G + ++G    AL   + MV  G+
Sbjct: 595 NALIGGYCDQGKLDTALLYRDRMVERGV 622


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 189/382 (49%), Gaps = 11/382 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M +    PN  +  
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166

Query: 63  TLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            L+  LC   + Q  +++L  +   G  C P V+  T++I    +E  +++       ML
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + ++ + + YS I+ A  K + ++ A+ V   M+K G   N   Y + +  YC  G+ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA   +++M + G++P   T+N L++   K  R  E+    + M  R L P  + +  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +     G   + +G+L L +  G  PN   +S LI  YAK+G++ + + ++ +M  + ++
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGNKAK 356
           P    Y ++I  LC+ G++E+A +YF+ M    L PG  +Y SL  IH     +K +KAK
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL--IHSLCIFDKWDKAK 464

Query: 357 ALHLCEEMVSEGLKPSTSYLCS 378
            L L  EM+  G+   T +  S
Sbjct: 465 ELIL--EMLDRGICLDTIFFNS 484



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 167/356 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   ++++++++I  + K+   D    +   M++N   PN  T  +++   C  GQ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++H     P V+   SL+  + +  R  E   +   M ++ +  +   Y  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   N +V++  I AY + GK+++A  +  +M   GL 
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  +I    K+ R+E+++ Y EQM+  +L P    +N +I  LC      +A  +
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   + I ++ +I  + KEG + E  KL+  M    + P +  Y++LI   C 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            GK++EA K    M S  + P    Y +L+  + +      AL L  EM S G+ P
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 155/327 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+ LI    K  + D    ++  M +    P+  T  T+I  LCK G+++  +   +++ 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +R SP  IV  SLI  +   ++ ++   L+  ML + +  DTI ++ I+ +  K   + 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   +   Y+T I  YC  GK++EA  L+  M + G+KP   T+N LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+E++L    +M S  + P    +N +++ L +      A  +     + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKG 352
           F  + ++ LVP V  Y  +    +E+G
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 147/320 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G    ++++N+L+  + K+ R     +++  M +    P   T  TL+ 
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V + LI    ++ ++++ M++  +M ++ +  
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT+ Y  ++    K   +E A+  +E+M+    S  + VY + I + C + K ++A  L+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I+   K  R+ ES    + M+   + P    ++ +I   C  
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L   +  G  P+ +TY+ LI GY K   +++ L L+ EME   +SP +  Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 307 TSLISSLCQCGKLEEADKYF 326
             ++  L Q  +   A + +
Sbjct: 588 NIILQGLFQTRRTAAAKELY 607



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/358 (20%), Positives = 158/358 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++ TL+           +  +   M+ N  +PN      LI A  K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +  ++  +  +P  +   ++I  + +  R+E+ M   ++M+ + +    I Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++++       + A  +  EML RG   ++  + + I ++C+ G++ E+  L   M   G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T++ LI+G   A +++E+      M+S  + P C  +N +I   C+    + A 
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G SP+ ITY+ ++ G  +        +LY  +        L  Y  ++  L
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           C+    +EA + F+ +    L      +  ++G  L+ G   +A  L   + + GL P
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 687



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 10/331 (3%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  RY EQ      S   I +N+LIH +   D+ D    +   ML+     +     ++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P +I  ++LI       +++E   LL  M+  
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVK---PDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            M  D + Y+ ++    K+  +E ALV++ EM   G S +   Y   +    +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  P+  TYS +     ++G ++E+  L+  ME    +  
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 303 LPAYTSLISSLCQCGKLEEADKY-FKIMKSH 332
                S++  L Q G +  A  Y F I + H
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 182/401 (45%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   +  RG + S+   N L+  + ++D   L+W++ + M+     P+  T  TLI 
Sbjct: 193 AAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIE 252

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK  +  T   +L  +  + C    +    LI  + +   +EE     K M    ++ 
Sbjct: 253 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVP 312

Query: 127 DTIAY------------------------------SLIVYAKV-----KMRNLESALVVY 151
           D   Y                              +++VYA +     +  N + A  + 
Sbjct: 313 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 372

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           +EM+  G   N   Y   +   C+ G+++ A+ L+++M     +P   T+NL+IEG  + 
Sbjct: 373 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 432

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
              +++     +M +  + P+   ++ MI  LC+ G  ++A+ +L     KG  PN   Y
Sbjct: 433 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 492

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI GY +EG +    +++ +M   ++ P L  Y SLI  L + G++EE+ KYF  M+ 
Sbjct: 493 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 552

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L+P    Y  L+  +L+ G+   A  L + M+  GLKP+
Sbjct: 553 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 593



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 160/350 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++N +I    +       +R+   M      PN  T   +I  LC+ G+ +   D+L+ 
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K   P   V   LI    +E  +     +  +M + N++ D   Y+ +++   K+  
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E +   + +M +RG   N F Y+  I  Y + G +E A  L+Q M + GLKP D  +  
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+E   K+  IE+  S  + M+ + ++     +  +I  L   GN + A  +L+     G
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+   YS LI G  K  + ++   +  EM  K + P +  Y +LI  LC+ G +  A 
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             F  + +  LVP    Y SL+    + G+ + A +L  EM++ G+ P  
Sbjct: 720 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 769



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 160/351 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ +  LI    +    D  +++ + M+     PN+ T   L+  LCK GQ+     +L
Sbjct: 348 NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 407

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P  I    +I    +    ++   LL  M    +  +   YS++++   + 
Sbjct: 408 KQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 467

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E A  + EEM  +G   N+FVY   I  YC  G +  A  +  +M    + P    +
Sbjct: 468 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 527

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G +K  R+EES  Y  QM  R LLP+   ++ +I    + G+ + A  ++   LD
Sbjct: 528 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 587

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  PN++ Y  L+  Y K  +I++V   +  M  + +      Y  LI +L   G +E 
Sbjct: 588 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 647

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +    ++ +  VP V +Y SL+    +  ++ KA  + +EM  +G+ P+
Sbjct: 648 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 698



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 164/369 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +E  G S ++ +++ +IH + +S   +    + + M      PN      LIS
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 497

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G +    ++ D++      P +    SLI  + +  R+EE      +M  + ++ 
Sbjct: 498 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 557

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   YS +++  +K  +LESA  + + ML  G   N  +Y   + +Y +   IE+ +   
Sbjct: 558 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 617

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M + G+   +  + +LI   + +  +E +      +     +P    ++ +I  LC+ 
Sbjct: 618 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 677

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            + ++A G+L     KG  PN + Y+ LI G  K G+I     ++  +  K + P    Y
Sbjct: 678 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 737

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI   C+ G +  A   +  M +  + P   +Y  L       G+  +A+ L EEM  
Sbjct: 738 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL 797

Query: 367 EGLKPSTSY 375
            G    +S+
Sbjct: 798 RGHASISSF 806



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 191/477 (40%), Gaps = 105/477 (22%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R F+ A  V   + +RG  L+ +++N LI  + +S   +  +   + M +    P+  T
Sbjct: 257 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 316

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM------- 113
              LI+ LCK  +      +LD +      P V+V  +LI   ++E   +E         
Sbjct: 317 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 376

Query: 114 ----------------------------VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                                       +LLK+M+R +   DTI Y+LI+    +  + +
Sbjct: 377 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 436

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP--------- 196
            A  +  EM   G S N + Y+  I   C+ G+ E+A+ L++EM   GLKP         
Sbjct: 437 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 496

Query: 197 ---------------YDET-----------FNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
                          +D+            +N LI G +K  R+EES  Y  QM  R LL
Sbjct: 497 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 556

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P+   ++ +I    + G+ + A  ++   LD G  PN++ Y  L+  Y K  +I++V   
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 616

Query: 291 YYEM-----------------------------------EYKSISPTLPAYTSLISSLCQ 315
           +  M                                   E     P +  Y+SLIS LC+
Sbjct: 617 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 676

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               E+A      M    + P +  Y +L+    + G+ + A ++   ++++GL P+
Sbjct: 677 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPN 733



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 165/378 (43%), Gaps = 35/378 (9%)

Query: 29  LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR 88
           LI ++       +V       L +  + + A +  L+    K G++Q   +++  +  + 
Sbjct: 145 LIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRG 204

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
            +P +    +L+  +++ + +     + + M+   +  D   YS ++ A  K+R  ++A 
Sbjct: 205 MAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAK 264

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            V  EM +RG   N+  Y   I   C  G +EEA    ++ME+ GL P   T+  LI G 
Sbjct: 265 KVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGL 324

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K++R  E+ +  ++M   +L P+   +  +I      GNA +A  M+   +  G  PN+
Sbjct: 325 CKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNK 384

Query: 269 ITYSHLIGGYAKEGEI-----------------------------------QEVLKLYYE 293
           ITY +L+ G  K G++                                   ++  +L  E
Sbjct: 385 ITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSE 444

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           ME   ISP +  Y+ +I  LCQ G+ E+A    + M +  L P   +Y  L+  +  +GN
Sbjct: 445 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 504

Query: 354 KAKALHLCEEMVSEGLKP 371
            + A  + ++M    + P
Sbjct: 505 VSLACEIFDKMTKVNVLP 522



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 173/387 (44%), Gaps = 19/387 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  + + +   G   + + +  L+    KSD  + V   ++ ML+     +      
Sbjct: 575 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 634

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L   G ++    +L  I      P V V +SLI  + +    E+   +L  M +K 
Sbjct: 635 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 694

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ ++    K  ++  A  V+  +L +G   N   YT+ I   C+ G I  A 
Sbjct: 695 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 754

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM   G+ P    +++L  GC+ A  +E+++   E+M  R    S S+FN ++   
Sbjct: 755 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGF 813

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++   +L + + +G  PN +T  ++I G ++ G++ EV  ++ E++ K+     
Sbjct: 814 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA 873

Query: 304 PAYTSL------------------ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             ++SL                  I   C+ G L++A     ++ + S   G   Y ++V
Sbjct: 874 RHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIV 933

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
                KG  ++AL+L +EM   G+ PS
Sbjct: 934 DNLCRKGKLSEALNLLKEMDKRGICPS 960



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 154/368 (41%), Gaps = 21/368 (5%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E AF V   +E+ G    +  +++LI  + K+   +  + I   M +    PN      L
Sbjct: 646  EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 705

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            I  LCK G +    ++ + I  K   P  +  TSLI    +   I     L   ML   +
Sbjct: 706  IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 765

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              D   YS++        +LE A+ + EEM  RG ++ S  +   +  +C+ GK++E   
Sbjct: 766  TPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLK 824

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEES-------------------LSYCEQMM 225
            L+  +   GL P   T   +I G ++A ++ E                     S    M+
Sbjct: 825  LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMI 884

Query: 226  SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
            ++  +P     ++MIR  C+ GN  +A  +  + + K       +Y  ++    ++G++ 
Sbjct: 885  NQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLS 943

Query: 286  EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            E L L  EM+ + I P+      L+++L   G ++E +     M  H  +     + +  
Sbjct: 944  EALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKWLQKDSKFCNSA 1003

Query: 346  GIHLEKGN 353
            G +LE  N
Sbjct: 1004 GDNLESVN 1011



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 35/224 (15%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V E M+  G S + + Y+T I AYC+  + + A  ++ EM   G      T+N+LI G  
Sbjct: 231 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG-- 288

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
                                            LC  G  ++A G      D G  P+  
Sbjct: 289 ---------------------------------LCRSGAVEEAFGFKKDMEDYGLVPDGF 315

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY  LI G  K     E   L  EM    + P +  Y +LI    + G  +EA K  K M
Sbjct: 316 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 375

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  + P    Y++LV    + G   +A  L ++MV +  +P T
Sbjct: 376 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 167/382 (43%), Gaps = 40/382 (10%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N LI  + + +    V  +Y +M ++  +PN  T   L+ ALC+  ++     MLD + 
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            K C P  +   +++  + + +R++E   +L  M          +Y+ IV A  +   ++
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQ 245

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
               V  +M+ RG   N   YTT + A+C+ G++  A  ++  M   G  P   TF  L+
Sbjct: 246 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 305

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G     R+ ++L     M++    PS  ++N +IR LC  G+ K A+ +L      G  
Sbjct: 306 RGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCF 365

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT------------------ 307
           PN  TYS LI G++K G++   + ++ +M      P +  YT                  
Sbjct: 366 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSL 425

Query: 308 -----------------SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
                            +LI SLC C ++  A   F  M+ H  VP    Y  L+     
Sbjct: 426 IDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFR 485

Query: 351 KGNKAKALHLCEEMVSEGLKPS 372
           +GN   ALH+  EM S G++ S
Sbjct: 486 EGNCGDALHMVTEMQSHGIELS 507



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 154/328 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++  + +  R   V+ +   M+     PN  T  T++ A CK G+L+    +L R+
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 289

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C+P V+  T+L+  +  + R+ + + + + M+ +     T++Y++++     + +L
Sbjct: 290 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 349

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  +   M + G   N   Y+T I  + + G +  A  +  +M  +G KP    +  +
Sbjct: 350 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 409

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++   K     ++ S  ++M+     P+   FN +IR LC+C    +A G+       G 
Sbjct: 410 VDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC 469

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  TY+ LI G  +EG   + L +  EM+   I  +L  Y +++S LCQ     EA  
Sbjct: 470 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMV 529

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +   M    + P    + +++  + ++G
Sbjct: 530 FVGKMIVQGIQPNAFTFSAIIHAYCKEG 557



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/359 (20%), Positives = 156/359 (43%), Gaps = 5/359 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G     +++ T++ V+ K DR D    +   M      P  A+   ++ ALC+  +
Sbjct: 189 MARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFR 243

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q    ++  + G+   P VI  T+++    +   +     +L RM+      + + ++ 
Sbjct: 244 MQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTA 303

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V        +  AL ++  M+  G++ ++  Y   I   C  G ++ A+ ++  ME  G
Sbjct: 304 LVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHG 363

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T++ LI+G +KA  +  ++S    M      P+   +  M+   C+     QA 
Sbjct: 364 CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAK 423

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++   L +   PN +T++ LI        +   L +++EM      P    Y  LI  L
Sbjct: 424 SLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGL 483

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + G   +A      M+SH +   +  Y ++V    +     +A+    +M+ +G++P+
Sbjct: 484 FREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 542



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 5/310 (1%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI AL +   +   V + D +      P V     L+  + Q  R+     +L  M RK 
Sbjct: 134 LIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKG 193

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y+ IV    K+  L+ A  V   M     S N+ V      A C   +++E  
Sbjct: 194 CPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVL-----ALCREFRMQEVF 248

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ +M   GL+P   T+  +++   KA  +  + +   +M+     P+   F  ++R L
Sbjct: 249 SVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGL 308

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G    A  M    + +G++P+ ++Y+ LI G    G+++    +   ME     P +
Sbjct: 309 FDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNV 368

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y++LI    + G L  A   +  M      P V +Y ++V +  +K    +A  L ++
Sbjct: 369 RTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDK 428

Query: 364 MVSEGLKPST 373
           M+ E   P+T
Sbjct: 429 MLLENCPPNT 438



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 131/311 (42%), Gaps = 45/311 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ R++   G++ S +S+N LI  +           I   M ++  +PN  T  TLI 
Sbjct: 317 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 376

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G L   + + + +    C P V+V T+++    ++    +   L+ +ML +N   
Sbjct: 377 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 436

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC-- 184
           +T+ ++ ++ +    R +  AL V+ EM + G   N   Y   I     +G   E NC  
Sbjct: 437 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI-----HGLFREGNCGD 491

Query: 185 ---LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              ++ EM++ G++    T+N ++ G  + +   E++ +  +M+ + + P+   F+ +I 
Sbjct: 492 ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIH 551

Query: 242 RLCECGNAKQANGMLTLA-----------------------------------LDKGFSP 266
             C+ G  + A  ML                                      L +G  P
Sbjct: 552 AYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYP 611

Query: 267 NEITYSHLIGG 277
           N +T++ L+ G
Sbjct: 612 NTVTWNVLVRG 622



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 12/205 (5%)

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G+ P   T+NLL+    +  R+  +    ++M  +   P    +  ++  LC+ 
Sbjct: 152 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL 211

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +L         P   +Y+ ++    +E  +QEV  +  +M  + + P +  Y
Sbjct: 212 DRLDEATEVLA-----AMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITY 266

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+++ + C+ G+L  A      M      P V  + +LV    + G    AL +   MV+
Sbjct: 267 TTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVA 326

Query: 367 EGLKPST-SY------LCSASTCRG 384
           EG  PST SY      LCS    +G
Sbjct: 327 EGWAPSTVSYNILIRGLCSVGDLKG 351


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 173/372 (46%), Gaps = 35/372 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  + AF     ++++G    + + N ++ +  K +R ++ W +Y  M          T
Sbjct: 170 LRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYT 229

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +++ LCK G+L+   + +  + G    P V+                          
Sbjct: 230 FNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVV-------------------------- 263

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                    +Y+ I++      N+E A  + + M  +G   +S+ Y + I   C+ G++E
Sbjct: 264 ---------SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 314

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA+ L  +M   GL P   T+N LI+G      +E + SY ++M+ + ++PS S +N ++
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L   G   +A+ M+     KG  P+ ITY+ LI GY++ G  ++   L+ EM  K I 
Sbjct: 375 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 434

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           PT   YTSLI  L +  +++EAD  F+ +    + P V ++ ++V  H   GN  +A  L
Sbjct: 435 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 494

Query: 361 CEEMVSEGLKPS 372
            +EM  + + P 
Sbjct: 495 LKEMDRKSVPPD 506



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 174/362 (48%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++E  GF  +++S+NT+IH  +     +   RI   M      P+  T  +LIS +CK G
Sbjct: 252 FMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG 311

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L+    + D++      P  +   +LI     +  +E        M++K ++     Y+
Sbjct: 312 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 371

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           L+V+A      +  A  + +EM K+G   ++  Y   I  Y   G  ++A  L  EM + 
Sbjct: 372 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK 431

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G++P   T+  LI   ++  R++E+    E+++ + + P    FN M+   C  GN ++A
Sbjct: 432 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA 491

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L     K   P+E+T++ L+ G  +EG+++E   L  EM+ + I P   +Y +LIS 
Sbjct: 492 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 551

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + G +++A +    M S    P +  Y +L+    +      A  L +EMV++G+ P 
Sbjct: 552 YGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 611

Query: 373 TS 374
            S
Sbjct: 612 DS 613



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 156/329 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G      ++ +LI  + K  R +    ++  M+E    PN  T  TLI   C  G L+ 
Sbjct: 291 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 350

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
                D +  K   P V     L+  +  E R+ E   ++K M +K +I D I Y++++ 
Sbjct: 351 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +  N + A  ++ EML +G       YT+ I       +++EA+ L +++ + G+ P
Sbjct: 411 GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP 470

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               FN +++G      +E +    ++M  + + P    FN +++  C  G  ++A  +L
Sbjct: 471 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 530

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G  P+ I+Y+ LI GY + G+I++  ++  EM     +PTL  Y +LI  LC+ 
Sbjct: 531 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            + + A++  K M +  + P    Y SL+
Sbjct: 591 QEGDLAEELLKEMVNKGISPDDSTYLSLI 619



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 133/274 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF     + ++G   S+ ++N L+H +    R      + + M +    P+  T   
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 407

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+   + G  +   D+ + +  K   P  +  TSLI  + +  R++E   L +++L + 
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D I ++ +V       N+E A ++ +EM ++    +   + T +   C  GK+EEA 
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM+  G+KP   ++N LI G  +   I+++    ++M+S    P+   +N +I+ L
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 587

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           C+      A  +L   ++KG SP++ TY  LI G
Sbjct: 588 CKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 104/213 (48%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +S V+   +   CE  + +EA      M+  G+ P  ET N ++    K  R+E +    
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            +M   ++  +   FN M+  LC+ G  K+A   +      GF PN ++Y+ +I GY+  
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G I+   ++   M  K I P    Y SLIS +C+ G+LEEA   F  M    LVP    Y
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +L+  +  KG+  +A    +EMV +G+ PS S
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 368



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 102/211 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   +  +G   + +++ +LI+V+++ +R      +++ +L+    P+      ++ 
Sbjct: 421 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 480

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G ++    +L  +  K   P  +   +L+    +E ++EE  +LL  M R+ +  
Sbjct: 481 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 540

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I+Y+ ++    +  +++ A  V +EML  GF+     Y   I   C+  + + A  L+
Sbjct: 541 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 600

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           +EM N G+ P D T+  LIEG      + E 
Sbjct: 601 KEMVNKGISPDDSTYLSLIEGMGNVDTLVED 631


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 174/370 (47%), Gaps = 2/370 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + +RGF L++ +FN L+    +S  +     ++  M  N   P+  +  T+I+
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCKG +L    ++   + G  C P  +  ++LI    +   +EEG  LL+ M +  +  
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   YS ++       ++E    ++ EML++  + N   Y+  + A C+  K +EA  ++
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M    ++P    + +L +G +K  R  +++   + M+ R   P+   +N +I  LC+ 
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE 352

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS--ISPTLP 304
           G    A G+L     KG  P+ +TYS L+ G    G+I E + L   +  K   I P + 
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A+  +I  LC+  +L  A + +  M        +  Y  L+  +L  G   KAL L ++ 
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472

Query: 365 VSEGLKPSTS 374
           V  G+ P+ +
Sbjct: 473 VDSGISPNAA 482



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 173/350 (49%), Gaps = 2/350 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++  L   ++K+ R     ++   M++    PN  T   +I+ LCK G++   + +L
Sbjct: 303 DVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGIL 362

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK--NMIHDTIAYSLIVYAKV 139
           + +  K   P V+  ++L+  +    +I+E + LL  ++ K  ++  D  A++L++    
Sbjct: 363 ETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELC 422

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K R L  A  VY  M++RGF +N   Y   I  Y   GK+ +A  L ++  ++G+ P   
Sbjct: 423 KQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAA 482

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+ +LI G  K + +  +     +  +    P+ S +N ++  LC   + +QA  +    
Sbjct: 483 TYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEM 542

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
            +    P+ ++++ +I G  K G+++   +L  EM   ++ P    ++ LI+   + G+L
Sbjct: 543 RNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQL 602

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +EA   ++ M S   VP   +++SL+  +  KG   K + + ++M  + +
Sbjct: 603 DEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/406 (22%), Positives = 165/406 (40%), Gaps = 37/406 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E  F +   +E+ G    +  ++ LI         +    ++  ML     PN  T   L
Sbjct: 216 EEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCL 275

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++ALCK  + +    MLD + G +  P V+  T L   + +  R  + + +L  M+++  
Sbjct: 276 MNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE 335

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-- 182
             + + Y+ I+    K   ++ AL + E M K+G   +   Y+T +   C  GKI+EA  
Sbjct: 336 EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVD 395

Query: 183 -------------------NCLMQE----------------MENAGLKPYDETFNLLIEG 207
                              N ++QE                M   G      T+N+LI+G
Sbjct: 396 LLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDG 455

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
              A ++ ++L   +  +   + P+ + +  +I  LC+      A G+       G  P 
Sbjct: 456 YLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPT 515

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
              Y+ L+    +E  +++   L+ EM   +  P + ++  +I    + G +E A +   
Sbjct: 516 VSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLL 575

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            M + +LVP    +  L+   L+ G   +A  L E MVS G  P  
Sbjct: 576 EMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDA 621



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 158/366 (43%), Gaps = 37/366 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + +RG   + +++N +I+ + K  R D    I + M +  + P+  T  TL+ 
Sbjct: 323 AIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVK 382

Query: 67  ALCKGGQLQTYVDMLDRIHGK--RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            LC  G++   VD+L+ +  K     P V     +I  + ++ R+     +   M+ +  
Sbjct: 383 GLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGF 442

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC---------- 174
             + + Y++++   +    L  AL ++++ +  G S N+  YT  I   C          
Sbjct: 443 PSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKG 502

Query: 175 ---------------EYG----------KIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
                          EY            +E+A  L QEM NA   P   +FN++I+G  
Sbjct: 503 LFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTL 562

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           KA  +E +     +M++  L+P    F+ +I R  + G   +A  +    +  G  P+ +
Sbjct: 563 KAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAV 622

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            +  L+ GY+ +G+ ++V+ +  +M  K +       +++++ LC   K  + +K     
Sbjct: 623 LFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKF 682

Query: 330 KSHSLV 335
             H+ V
Sbjct: 683 SQHTSV 688



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 118/244 (48%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           + S ++ + V  +    A  V   ++KRGF  N + +   +  +C+ G   +A  L   M
Sbjct: 96  SLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMM 155

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           +   L P   ++N +I G  K KR+ E+    ++M   +  P+   F+ +I   C+ G+ 
Sbjct: 156 KRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDV 215

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++  G+L      G   +   YS LI G+  +G+I+   +L+ EM  K+++P +  Y+ L
Sbjct: 216 EEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCL 275

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +++LC+  K +EA +    M    + P V  Y  L     + G  + A+ + + MV  G 
Sbjct: 276 MNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE 335

Query: 370 KPST 373
           +P+ 
Sbjct: 336 EPNN 339



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 6/331 (1%)

Query: 46  YQHMLENIRYPNE----ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
           + H L++  YPN     ++  TLI  L K       + +  ++      P     ++LI 
Sbjct: 45  FHHTLQD--YPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIE 102

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
             +  ++      +L  ++++    +   ++L++    +  +   A+ ++  M +     
Sbjct: 103 SFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIP 162

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y T I   C+  ++ EA  L +EM+    KP   TF+ LI+G  K   +EE     
Sbjct: 163 DCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLL 222

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           E+M    L      ++ +I   C  G+ ++   +    L K  +PN +TYS L+    K+
Sbjct: 223 EEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKK 282

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
            + +E  ++   M    + P + AYT L   L + G+  +A K   +M      P    Y
Sbjct: 283 QKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTY 342

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +++    ++G    AL + E M  +G KP 
Sbjct: 343 NAIINGLCKEGRVDDALGILETMAKKGKKPD 373



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 1/191 (0%)

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M +  + P   + + LIE     ++   +      +M R    +   FN +++  C+ G
Sbjct: 84  KMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSG 143

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
           ++ +A  +  +       P+ ++Y+ +I G  K   + E  +L+ EM+     P    ++
Sbjct: 144 DSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFS 203

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +LI   C+ G +EE     + M+   L   V +Y +L+     KG+  +   L  EM+ +
Sbjct: 204 ALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK 263

Query: 368 GLKPS-TSYLC 377
            + P+  +Y C
Sbjct: 264 NVTPNVVTYSC 274


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 170/357 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S +++S+N +I    + D  +   ++Y+ ML+N   PN  T   L+    K G ++ 
Sbjct: 278 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 337

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +  R+      P       +I  + +  R  EG  L  + + +  +   + Y+ I+ 
Sbjct: 338 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 397

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
             +K  N+  A  VY EM + G + ++  YT+ I  +C+   I+ A  L+ +M+  GLK 
Sbjct: 398 GFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKM 457

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
             + +  LI+G  K + ++ +     ++    L P+   +N MI       N ++A  + 
Sbjct: 458 DIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLY 517

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +++G   +  TY+ LI G  K G +     ++ EM  K I P   A+T LI+ LC  
Sbjct: 518 KKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNK 577

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G+ E A K  + M   +++P V IY +L+  H ++GN  +A  L +EM+  GL P  
Sbjct: 578 GQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDN 634



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 166/365 (45%), Gaps = 36/365 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF+    ++ +G   S+ S N+++    K       + ++   LE+    N  T  TL
Sbjct: 197 EKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES-GLANVFTFNTL 255

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +S LCK G++    ++ D +  K  SP V                               
Sbjct: 256 LSWLCKEGKMNEACNLWDEVIAKGISPNV------------------------------- 284

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               ++Y+ I+    +  N+ +A  VY+EML  GF+ N+  +T  +  Y + G IE A  
Sbjct: 285 ----VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 340

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +   M++A + P D T  ++I+G  KA R  E      + +S+  +P+C  +N +I    
Sbjct: 341 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 400

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + GN   A+ +     + G +P+ +TY+ LI G+ K   I   LKL  +M+ K +   + 
Sbjct: 401 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 460

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY +LI   C+   ++ A +    ++   L P   IY S++       N  +A+ L ++M
Sbjct: 461 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520

Query: 365 VSEGL 369
           V+EG+
Sbjct: 521 VNEGI 525



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 167/359 (46%), Gaps = 1/359 (0%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           + RG  L   +++  +H++     +     + + M      P E T  ++I+A  K G +
Sbjct: 67  KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 126

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              + + D +     S  + V TSL+     +  +   +VL+  +    ++ + + YS++
Sbjct: 127 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 186

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K  N+E A   Y EM  +G  ++ +   + +  Y +    + A  +  +   +GL
Sbjct: 187 IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL 246

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                TFN L+    K  ++ E+ +  ++++++ + P+  ++N +I   C   N   A  
Sbjct: 247 ANV-FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 305

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +    LD GF+PN +T++ L+ GY K+G+I+    +++ M+  +I PT      +I  LC
Sbjct: 306 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 365

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + G+  E    F    S   VP    Y +++   +++GN   A ++  EM   G+ PST
Sbjct: 366 KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 424



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 159/344 (46%), Gaps = 1/344 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
             GF+ + ++F  L+    K    +  + I+  M +    P + T+  +I  LCK G+  
Sbjct: 312 DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 371

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              D+ ++   +   P  +   ++I   I+E  I     + + M    +   T+ Y+ ++
Sbjct: 372 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLI 431

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  N++ AL +  +M ++G   +   Y T I  +C+   ++ A+ L+ E+  AGL 
Sbjct: 432 DGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 491

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N +I G      +EE++   ++M++  +      +  +I  L + G    A+ +
Sbjct: 492 PNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDI 551

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            T  L KG  P++  ++ LI G   +G+ +   K+  +M  K++ P++  Y +LI+   +
Sbjct: 552 HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 611

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKAL 358
            G L+EA +    M    LVP    Y+ LV G     GN ++ L
Sbjct: 612 EGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFSRDL 655



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 164/401 (40%), Gaps = 36/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +   G+     +F ++I    K        R+   M+   +  N A   +L+ 
Sbjct: 94  ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 153

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G L++ + +++ I      P  +  + LI    +   IE+       M  K +  
Sbjct: 154 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 213

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              + + I+   +K ++ ++A  ++ + L+ G  AN F + T +   C+ GK+ EA  L 
Sbjct: 214 SVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLW 272

Query: 187 -----------------------------------QEMENAGLKPYDETFNLLIEGCAKA 211
                                              +EM + G  P   TF +L++G  K 
Sbjct: 273 DEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKK 332

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             IE + S   +M    +LP+ +    +I+ LC+ G + +   +    + +GF P  + Y
Sbjct: 333 GDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPY 392

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I G+ KEG I     +Y EM    I+P+   YTSLI   C+   ++ A K    MK 
Sbjct: 393 NTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 452

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L   +  Y +L+    ++ +   A  L  E+   GL P+
Sbjct: 453 KGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 493



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 1/264 (0%)

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           + LL+ M     I     ++ ++ A VK  N+  AL + ++M+  G S N  V T+ +  
Sbjct: 95  LSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKG 154

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           YC  G +  A  L+ E+  +GL P   T+++LI+GC K   IE++  +  +M ++ +  S
Sbjct: 155 YCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSS 214

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
             + N ++    +C + + A  M   AL+ G + N  T++ L+    KEG++ E   L+ 
Sbjct: 215 VYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWD 273

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           E+  K ISP + +Y ++I   C+   +  A K +K M  +   P    +  L+  + +KG
Sbjct: 274 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 333

Query: 353 NKAKALHLCEEMVSEGLKPSTSYL 376
           +   A  +   M    + P+ + L
Sbjct: 334 DIENAFSIFHRMKDANILPTDTTL 357



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 1/279 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R FE   D+      +GF  + + +NT+I    K    +L   +Y+ M E    P+  T 
Sbjct: 369 RSFE-GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 427

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI   CKG  +   + +L+ +  K     +    +LI    +   ++    LL  +  
Sbjct: 428 TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 487

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  +   Y+ ++     M N+E A+ +Y++M+  G   +   YT+ I    + G++  
Sbjct: 488 AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY 547

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A+ +  EM + G+ P D    +LI G     + E +    E M  + ++PS   +N +I 
Sbjct: 548 ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIA 607

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
              + GN ++A  +    LD+G  P+ ITY  L+ G  K
Sbjct: 608 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 1/283 (0%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           +P +     L+  ++++    E   L  +ML   +  D     +++ A +K  N+  A  
Sbjct: 2   TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
            + +   RG   +   Y+ F+   C       A  L++EM  AG  P + TF  +I  C 
Sbjct: 62  HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K   + E+L   + M++     + +    +++  C  GN + A  ++    + G  PN++
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKV 181

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TYS LI G  K G I++  + Y EM+ K I  ++ +  S++    +C   + A   F   
Sbjct: 182 TYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDA 241

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               L   V  + +L+    ++G   +A +L +E++++G+ P+
Sbjct: 242 LESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 283



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   E A D+ + +   G    L ++ +LI  + KS R      I+  ML     P++  
Sbjct: 507 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 566

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LC  GQ +    +L+ ++GK   P V++  +LI    +E  ++E   L   ML
Sbjct: 567 HTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML 626

Query: 121 RKNMIHDTIAYSLIVYAKVK 140
            + ++ D I Y ++V  K K
Sbjct: 627 DRGLVPDNITYDILVNGKFK 646



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 77/179 (43%)

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T ++++  C K   I E+  +  Q  +R +     A++  +  LC   N+  A  +L   
Sbjct: 42  TLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREM 101

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
              G+ P E T++ +I    KEG + E L+L  +M     S  L   TSL+   C  G L
Sbjct: 102 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 161

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             A      +    LVP    Y  L+    + GN  KA     EM ++G++ S   L S
Sbjct: 162 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 220


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 180/361 (49%), Gaps = 4/361 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q GF     +FNTL++ + K+        I   ML+    P+  T  ++IS LCK G+++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V++LD++  + CSP  +   +LI  + +E ++EE   L + +  K ++ D   ++ ++
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                 RN   A+ ++EEM  +G   + F Y   I + C  GK++EA  ++++ME +G  
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               T+N LI+G  KA +  E+    ++M    +  +   +N +I  LC+    + A  +
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   + +G  P++ TY+ L+  + + G+I++   +   M      P +  Y +LIS LC+
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 316 CGKLEEADKYFKI--MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G++E A K  +   MK  +L P    Y  ++     K    +A++L  EM+ +   P  
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645

Query: 374 S 374
           +
Sbjct: 646 A 646



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 164/372 (44%), Gaps = 2/372 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   + Q G+   + ++N++I  + K         +   M+     PN  T  TLIS
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  Q++   ++   +  K   P V    SLI  +         M L + M  K    
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++ +      L+ AL + ++M   G + +   Y T I  +C+  K  EA  + 
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EME  G+     T+N LI+G  K++R+E++    +QM+     P    +N ++   C  
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  ++      G  P+ +TY  LI G  K G ++   KL   ++ K I+ T  AY
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV--GIHLEKGNKAKALHLCEEM 364
             +I  L +  K  EA   F+ M   +  P   +   +V  G+    G   +A+    E+
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVEL 673

Query: 365 VSEGLKPSTSYL 376
           + +G  P  S L
Sbjct: 674 LEKGFVPEFSSL 685



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 162/350 (46%), Gaps = 10/350 (2%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDR 83
           +F  LI    + +  D +  +   M++     P+      +++ L  G  L+    +++ 
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK----LVEI 175

Query: 84  IHGKRC----SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
            H K       P V     LI  + +  ++   +++L+ M    ++ D   ++ ++   +
Sbjct: 176 SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA-GLKPYD 198
           +  +L+ AL + E+M++ G S ++      +  +C+ G++E+A   +QEM N  G  P  
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            TFN L+ G  KA  ++ ++   + M+     P    +N +I  LC+ G  K+A  +L  
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            + +  SPN +TY+ LI    KE +++E  +L   +  K I P +  + SLI  LC    
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
              A + F+ M+S    P    Y  L+     KG   +AL++ ++M   G
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 142/307 (46%), Gaps = 5/307 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ R L  +G    + +FN+LI  +  +  + +   +++ M      P+E T   L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +LC  G+L   ++ML ++    C+  VI   +LI    +  +  E   +   M    +
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +++ Y+ ++    K R +E A  + ++M+  G   + + Y + +  +C  G I++A  
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++Q M + G +P   T+  LI G  KA R+E +      +  + +  +  A+N +I+ L 
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621

Query: 245 ECGNAKQANGMLTLALDKGFS-PNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
                 +A  +    L++  + P+ ++Y  +  G     G I+E +    E+  K     
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF--- 678

Query: 303 LPAYTSL 309
           +P ++SL
Sbjct: 679 VPEFSSL 685



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/286 (19%), Positives = 128/286 (44%), Gaps = 2/286 (0%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           SP   +   ++LR+ +    ++   +L+ M        T  + +++ +  +    +  L 
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139

Query: 150 VYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           V + M+   G   ++  Y   +    +   ++       +M   G+KP   TFN+LI+  
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +A ++  ++   E M S  L+P    F  +++   E G+   A  +    ++ G S + 
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           ++ + ++ G+ KEG +++ L    EM  +    P    + +L++ LC+ G ++ A +   
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +M      P V  Y S++    + G   +A+ + ++M++    P+T
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 37/254 (14%)

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           K  FS    +Y   +      G  ++   ++++M+++  +    TF +LIE  A+ +  +
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135

Query: 216 ESLSYCEQMM-----------------------SRKLL-------------PSCSAFNEM 239
           E LS  + M+                       S KL+             P  S FN +
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I+ LC     + A  ML      G  P+E T++ ++ GY +EG++   L++  +M     
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS-LVPGVDIYESLVGIHLEKGNKAKAL 358
           S +  +   ++   C+ G++E+A  + + M +     P    + +LV    + G+   A+
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315

Query: 359 HLCEEMVSEGLKPS 372
            + + M+ EG  P 
Sbjct: 316 EIMDVMLQEGYDPD 329


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 173/372 (46%), Gaps = 35/372 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  + AF     ++++G    + + N ++ +  K +R ++ W +Y  M          T
Sbjct: 192 LRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYT 251

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +++ LCK G+L+   + +  + G    P V+                          
Sbjct: 252 FNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVV-------------------------- 285

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                    +Y+ I++      N+E A  + + M  +G   +S+ Y + I   C+ G++E
Sbjct: 286 ---------SYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 336

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA+ L  +M   GL P   T+N LI+G      +E + SY ++M+ + ++PS S +N ++
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L   G   +A+ M+     KG  P+ ITY+ LI GY++ G  ++   L+ EM  K I 
Sbjct: 397 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 456

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           PT   YTSLI  L +  +++EAD  F+ +    + P V ++ ++V  H   GN  +A  L
Sbjct: 457 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 516

Query: 361 CEEMVSEGLKPS 372
            +EM  + + P 
Sbjct: 517 LKEMDRKSVPPD 528



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 174/362 (48%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++E  GF  +++S+NT+IH  +     +   RI   M      P+  T  +LIS +CK G
Sbjct: 274 FMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG 333

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L+    + D++      P  +   +LI     +  +E        M++K ++     Y+
Sbjct: 334 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 393

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           L+V+A      +  A  + +EM K+G   ++  Y   I  Y   G  ++A  L  EM + 
Sbjct: 394 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK 453

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G++P   T+  LI   ++  R++E+    E+++ + + P    FN M+   C  GN ++A
Sbjct: 454 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA 513

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L     K   P+E+T++ L+ G  +EG+++E   L  EM+ + I P   +Y +LIS 
Sbjct: 514 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISG 573

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + G +++A +    M S    P +  Y +L+    +      A  L +EMV++G+ P 
Sbjct: 574 YGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 633

Query: 373 TS 374
            S
Sbjct: 634 DS 635



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 156/329 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G      ++ +LI  + K  R +    ++  M+E    PN  T  TLI   C  G L+ 
Sbjct: 313 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 372

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
                D +  K   P V     L+  +  E R+ E   ++K M +K +I D I Y++++ 
Sbjct: 373 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +  N + A  ++ EML +G       YT+ I       +++EA+ L +++ + G+ P
Sbjct: 433 GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP 492

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               FN +++G      +E +    ++M  + + P    FN +++  C  G  ++A  +L
Sbjct: 493 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G  P+ I+Y+ LI GY + G+I++  ++  EM     +PTL  Y +LI  LC+ 
Sbjct: 553 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            + + A++  K M +  + P    Y SL+
Sbjct: 613 QEGDLAEELLKEMVNKGISPDDSTYLSLI 641



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 133/274 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF     + ++G   S+ ++N L+H +    R      + + M +    P+  T   
Sbjct: 370 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 429

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+   + G  +   D+ + +  K   P  +  TSLI  + +  R++E   L +++L + 
Sbjct: 430 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D I ++ +V       N+E A ++ +EM ++    +   + T +   C  GK+EEA 
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 549

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM+  G+KP   ++N LI G  +   I+++    ++M+S    P+   +N +I+ L
Sbjct: 550 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 609

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           C+      A  +L   ++KG SP++ TY  LI G
Sbjct: 610 CKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 147/329 (44%), Gaps = 24/329 (7%)

Query: 48  HMLENIRYPN--EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           H +E +  PN   A I  ++  LC   QL +  D +  +H     P  +   S  L ++ 
Sbjct: 84  HFIEQVS-PNLTPALISNVLYNLCSKPQLVS--DFIHHLH-----PHCLDTKSYCLAVVL 135

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
             R+    + L+  L K ++   IA +         R L   L +  + L      +S V
Sbjct: 136 LARLPSPKLALQ--LLKQVMGTRIATN---------RELFDELTLSRDRLS---VKSSIV 181

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           +   +   CE  + +EA      M+  G+ P  ET N ++    K  R+E +     +M 
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
             ++  +   FN M+  LC+ G  K+A   +      GF PN ++Y+ +I GY+  G I+
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              ++   M  K I P    Y SLIS +C+ G+LEEA   F  M    LVP    Y +L+
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             +  KG+  +A    +EMV +G+ PS S
Sbjct: 362 DGYCNKGDLERAFSYRDEMVKKGIMPSVS 390



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 102/211 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   +  +G   + +++ +LI+V+++ +R      +++ +L+    P+      ++ 
Sbjct: 443 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 502

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G ++    +L  +  K   P  +   +L+    +E ++EE  +LL  M R+ +  
Sbjct: 503 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 562

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I+Y+ ++    +  +++ A  V +EML  GF+     Y   I   C+  + + A  L+
Sbjct: 563 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 622

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           +EM N G+ P D T+  LIEG      + E 
Sbjct: 623 KEMVNKGISPDDSTYLSLIEGMGNVDTLVED 653


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 189/382 (49%), Gaps = 11/382 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  ++  +    R +D +  + + M +    PN  +  
Sbjct: 107 LDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166

Query: 63  TLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            L+  LC   + Q  +++L  +   G  C P V+  T++I    +E  +++       ML
Sbjct: 167 ILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + ++ + + YS I+ A  K + ++ A+ V   M+K G   N   Y + +  YC  G+ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA   +++M + G++P   T+N L++   K  R  E+    + M  R L P  + +  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +     G   + +G+L L +  G  PN   +S LI  YAK+G++ + + ++ +M  + ++
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGNKAK 356
           P    Y ++I  LC+ G++E+A +YF+ M    L PG  +Y SL  IH     +K +KAK
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL--IHSLCIFDKWDKAK 464

Query: 357 ALHLCEEMVSEGLKPSTSYLCS 378
            L L  EM+  G+   T +  S
Sbjct: 465 ELIL--EMLDRGICLDTIFFNS 484



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 167/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   ++++++++I  + K+   D    +   M++N   PN  T  +++   C  GQ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++H     P V+   SL+  + +  R  E   +   M ++ +  +   Y  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   N +V++  I AY + GK+++A  +  +M   GL 
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  +I    K+ R+E+++ Y EQM+  +L P    +N +I  LC      +A  +
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   + I ++ +I  + KEG + E  KL+  M    + P +  Y++LI   C 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA K    M S  + P    Y +L+  + +      AL L  EM S G+ P 
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 155/327 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+ LI    K  + D    ++  M +    P+  T  T+I  LCK G+++  +   +++ 
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +R SP  IV  SLI  +   ++ ++   L+  ML + +  DTI ++ I+ +  K   + 
Sbjct: 437 DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   +   Y+T I  YC  GK++EA  L+  M + G+KP   T+N LI
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+E++L    +M S  + P    +N +++ L +      A  +     + G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 676

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKG 352
           F  + ++ LVP V  Y  +    +E+G
Sbjct: 677 FAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 147/320 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G    ++++N+L+  + K+ R     +++  M +    P   T  TL+ 
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V + LI    ++ ++++ M++  +M ++ +  
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT+ Y  ++    K   +E A+  +E+M+    S  + VY + I + C + K ++A  L+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I+   K  R+ ES    + M+   + P    ++ +I   C  
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L   +  G  P+ +TY+ LI GY K   +++ L L+ EME   +SP +  Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587

Query: 307 TSLISSLCQCGKLEEADKYF 326
             ++  L Q  +   A + +
Sbjct: 588 NIILQGLFQTRRTAAAKELY 607



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 158/359 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++ TL+           +  +   M+ N  +PN      LI A  K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +  ++  +  +P  +   ++I  + +  R+E+ M   ++M+ + +    I Y+ 
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++++       + A  +  EML RG   ++  + + I ++C+ G++ E+  L   M   G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T++ LI+G   A +++E+      M+S  + P C  +N +I   C+    + A 
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G SP+ ITY+ ++ G  +        +LY  +        L  Y  ++  L
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+    +EA + F+ +    L      +  ++G  L+ G   +A  L   + + GL P 
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 10/331 (3%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  RY EQ      S   I +N+LIH +   D+ D    +   ML+     +     ++I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P +I  ++LI       +++E   LL  M+  
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVK---PDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            M  D + Y+ ++    K+  +E ALV++ EM   G S +   Y   +    +  +   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  P+  TYS +     ++G ++E+  L+  ME    +  
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 303 LPAYTSLISSLCQCGKLEEADKY-FKIMKSH 332
                S++  L Q G +  A  Y F I + H
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 754



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 3/312 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  L  I FN++I    K  R     +++  M+     P+  T  TLI   C  G++ 
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 531

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L  +      P  +   +LI    +  R+E+ +VL + M    +  D I Y++I+
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               + R   +A  +Y  + + G       Y   +   C+    +EA  + Q +    L+
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               TFN++I    K  R +E+      + +  L+P    ++ M   L E G  ++ + +
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT-SLISSLC 314
                + G + N    + ++    + G+I       + ++ K  S  L A T SL   L 
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS--LEASTASLFLDLL 769

Query: 315 QCGKLEEADKYF 326
             GK +E  ++ 
Sbjct: 770 SGGKYQEYHRFL 781


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 4/369 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGG 72
           L + G     I  NT +  +  + R D    +  H + ++   PN  +  T+I +LC   
Sbjct: 182 LLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDS 241

Query: 73  QLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
           + Q  +DM+ R+   G RCSP V+   ++I    ++  + +   L+  M++K +  D + 
Sbjct: 242 RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVT 301

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ IV A  K R ++ A +V  +M+ +G   +   YT  I  Y   G  +E+  + ++M 
Sbjct: 302 YNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMT 361

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           + GL P   TFN  +    K  R +++    + M ++  +P   +++ ++      G   
Sbjct: 362 SKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFA 421

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             N +     DKG   N   ++ LI  +AK G + E + ++ EM+ + + P +  Y++LI
Sbjct: 422 DMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLI 481

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL- 369
           S+ C+ G+L +A + F  M S  L P   +Y SL+      G+  KA  L  EM+S+G+ 
Sbjct: 482 SAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIP 541

Query: 370 KPSTSYLCS 378
           +P+  +  S
Sbjct: 542 RPNIVFFSS 550



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 165/359 (45%), Gaps = 1/359 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q+G    ++++N+++  + K+   D    + + M++    P+  T   +I      G  +
Sbjct: 292 QKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWK 351

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M  ++  K   P ++   S +  + +  R ++   + + M  K  + D ++YS+++
Sbjct: 352 ESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILL 411

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +             ++  M  +G  AN   +   I A+ + G ++EA  +  EM+  G++
Sbjct: 412 HGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVR 471

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++ LI    +  R+ +++    QM+S  L P+   ++ +I   C  G+  +A  +
Sbjct: 472 PDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKEL 531

Query: 256 LTLALDKGFS-PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           ++  + KG   PN + +S +I     EG + +   ++  + +    PT+  + SLI   C
Sbjct: 532 VSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYC 591

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             GK+E+A      M S  + P V  Y +LV  + + G     L L  EM+ + +KP+T
Sbjct: 592 LVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 650



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 157/352 (44%), Gaps = 1/352 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI    K    D    ++  M      P+  T  TLISA C+ G+L   ++   ++ 
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-SLIVYAKVKMRNL 144
                P  +V  SLI        + +   L+  M+ K +    I + S I+++      +
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  V+  ++  G       + + I  YC  GK+E+A  ++  M + G++P   T+N L
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G  K+ +I++ L    +M+ +K+ P+   ++ ++  L   G    A  M    +D G 
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           + +  TY  L+ G  +     E + L++++        +    ++I++L +  + EEA+ 
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            F  + +  LVP V  Y  ++   L++G+  +A  +   M   G  PS+  L
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 793



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 134/311 (43%), Gaps = 5/311 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRTLISALCKGGQL 74
           G   + + +++LIH        DLV     + + M + I  PN     ++I +LC  G++
Sbjct: 504 GLEPNTVVYHSLIHGFCM--HGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
               D+ + +      P ++   SLI       ++E+   +L  M+   +  D + Y+ +
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           V    K   ++  L+++ EML +     +  Y+  +      G+   A  +  EM ++G 
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
               +T+ +L++G  +    +E+++   ++ +       +  N +I  L +    ++AN 
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +       G  PN  TY  +I    KEG ++E   ++  ME    +P+      +I  L 
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 801

Query: 315 QCGKLEEADKY 325
           Q G + +A  Y
Sbjct: 802 QKGDIVKAGYY 812



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 120/277 (43%), Gaps = 38/277 (13%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEM 189
           Y +++    + R  +     +  +L+ G    +    TF+   C   + +EA + L+  M
Sbjct: 159 YGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRM 218

Query: 190 ENAGLKP----YDE---------------------------------TFNLLIEGCAKAK 212
            + G  P    Y+                                  +FN +I G  K  
Sbjct: 219 SDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQG 278

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
            + ++ +   +M+ + + P    +N ++  LC+     +A  +L   +DKG  P+ +TY+
Sbjct: 279 EVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYT 338

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            +I GY+  G  +E  K++ +M  K + P +  + S +SSLC+ G+ ++A++ F+ M + 
Sbjct: 339 AIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTK 398

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             +P +  Y  L+  +  +G  A   +L   M  +G+
Sbjct: 399 GHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGI 435



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 134/307 (43%), Gaps = 4/307 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ F+++IH +    R      ++  ++     P   T  +LI   C  G+++    +L
Sbjct: 544 NIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 603

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +      P V+   +L+    +  +I++G++L + ML K +   T+ YS+++      
Sbjct: 604 DAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHA 663

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
               +A  ++ EM+  G + +   Y   +   C     +EA  L  ++     K      
Sbjct: 664 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITIL 723

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I    K +R EE+      + +  L+P+ S +  MI  L + G+ ++A+ M +    
Sbjct: 724 NTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEK 783

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS--LISSLCQCGKL 319
            G +P+    + +I    ++G+I  V   YY  +      +L A T+  L+S     GK 
Sbjct: 784 SGCAPSSRLLNDIIRMLLQKGDI--VKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKH 841

Query: 320 EEADKYF 326
            E  K+ 
Sbjct: 842 REQIKFL 848



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/277 (18%), Positives = 120/277 (43%), Gaps = 50/277 (18%)

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAY--------CEYGK---IEEANCLMQEMENAG 193
           + A  +++E+L++G   ++     F+ A         C  G    +   N + +E     
Sbjct: 91  DDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 150

Query: 194 LKPYD-ETFNLLIEGCAKAKRIEESLSYCEQMMSRKL----------------------- 229
           + P    T+ +L++ C +A+R +   ++  +++   L                       
Sbjct: 151 VAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA 210

Query: 230 -------------LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF--SPNEITYSHL 274
                        +P+  ++N +I+ LC    +++A  M+     +G   SP+ ++++ +
Sbjct: 211 VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 270

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G+ K+GE+ +   L  EM  K + P +  Y S++ +LC+   +++A+   + M    +
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            P    Y +++  +   G+  ++  +  +M S+GL P
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIP 367


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 170/349 (48%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            S+N +I  + +S +     +++  M++    PN+ T  T+I    KGG L+    + D+
Sbjct: 196 FSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQ 255

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P V+    L+  + +  R++E   L+  M   +M+ D   YS++     +  +
Sbjct: 256 MLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGD 315

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             + L ++ E LK+G    ++  +  +   C+ GK+ +A  +++ + + GL P    +N 
Sbjct: 316 SRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNT 375

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  + + ++ + S  EQM SR + P    +N +I  LC+     +A  ++      G
Sbjct: 376 LINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSG 435

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+  T++ LI  Y + G++++   +  +M+ K I   + ++ S++ + C+ GK+ EA 
Sbjct: 436 VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAV 495

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                M    +VP   +Y S++  ++E G   +A  L E+M S G+  S
Sbjct: 496 AILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSAS 544



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 185/401 (46%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +  RG + + I++NT+I    K    +  +R+   ML++ R PN  T   L+S
Sbjct: 214 ALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLS 273

Query: 67  ALCKGGQLQ-------------------TYVDMLD------------RIHGKRCSPMVIV 95
            LC+ G++                    TY  + D             + G+     VI+
Sbjct: 274 GLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII 333

Query: 96  NT---SLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                S++L  + ++ ++ +   +L+ ++   ++  T  Y+ ++    ++R+L+ A  ++
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF 393

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           E+M  R    +   Y   I   C+   I EA  L+ EME +G+ P  ETFN LI+   +A
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRA 453

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            ++E+  +    M  + +  +  +F  +++  C+ G   +A  +L   + K   PN   Y
Sbjct: 454 GQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVY 513

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I  Y + G  ++   L  +M+   +S ++  Y  L+  LC+  +++EA++    + +
Sbjct: 514 NSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTN 573

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L P V  Y +++     KG+  +AL L +EM    ++P+
Sbjct: 574 QGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPT 614



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 37/299 (12%)

Query: 109 IEEGMVLLKRMLRKNMIH--DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           ++E + +L+RM R       D  +Y++++    +      AL V++EM+ RG + N   Y
Sbjct: 174 LDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITY 233

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
            T I  + + G +E    L  +M   G KP   T+N+L+ G  +A R++E+ +  ++M S
Sbjct: 234 NTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTS 293

Query: 227 RKLLPS--------------------CSAFNEMIRR---------------LCECGNAKQ 251
             +LP                      S F E +++               LC+ G   +
Sbjct: 294 YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAK 353

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L + +  G  P    Y+ LI GY +  ++Q    ++ +M+ + I P    Y +LI+
Sbjct: 354 AEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALIN 413

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            LC+   + EA+     M+   + P V+ + +L+  +   G   K   +  +M  +G+K
Sbjct: 414 GLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIK 472



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 148/314 (47%), Gaps = 6/314 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P  A   TLI+  C+   LQ    + +++  +   P  I   +LI  + + E I E   L
Sbjct: 368 PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDL 427

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  M +  +      ++ ++ A  +   LE    V  +M  +G  +N   + + + A+C+
Sbjct: 428 VMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCK 487

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GKI EA  ++ +M +  + P  + +N +I+   ++   E++    E+M S  +  S   
Sbjct: 488 NGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFT 547

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +++ LC+     +A  ++    ++G  P+ ++Y+ +I     +G+    L+L  EM 
Sbjct: 548 YNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMH 607

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              I PTL  Y  L+S+L   G++ + +  ++ M   ++ P   IY    G   E  N++
Sbjct: 608 KYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY----GTRCE--NES 661

Query: 356 KALHLCEEMVSEGL 369
           K   L +EM  +G+
Sbjct: 662 KVASLKKEMSEKGI 675



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 3/189 (1%)

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF--NEMIRRLCECGNA 249
           AG +P    +N  ++ C  A  ++E+L+   +M   +  P   AF  N +I  L   G  
Sbjct: 152 AGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKG 211

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +    +D+G +PN+ITY+ +I G+ K G+++   +L  +M      P +  Y  L
Sbjct: 212 SDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVL 271

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +S LC+ G+++E       M S+S++P    Y  L       G+    L L  E + +G+
Sbjct: 272 LSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGV 331

Query: 370 KPSTSYLCS 378
               +Y CS
Sbjct: 332 IIG-AYTCS 339



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 106/236 (44%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M +   A D+   +E+ G   S+ +FNTLI    ++ + +  + +   M +     N  +
Sbjct: 418 MEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS 477

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +++ A CK G++   V +LD +  K   P   V  S+I   I+    E+  +L+++M 
Sbjct: 478 FGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK 537

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +      Y+L++    K   ++ A  +   +  +G   +   Y T I A C  G  +
Sbjct: 538 SSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTD 597

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
            A  L+QEM    ++P   T++ L+     A R+ +     + M+ + + PS S +
Sbjct: 598 RALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 170/357 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S +++S+N +I    + D  +   ++Y+ ML+N   PN  T   L+    K G ++ 
Sbjct: 396 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 455

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +  R+      P       +I  + +  R  EG  L  + + +  +   + Y+ I+ 
Sbjct: 456 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 515

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
             +K  N+  A  VY EM + G + ++  YT+ I  +C+   I+ A  L+ +M+  GLK 
Sbjct: 516 GFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKM 575

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
             + +  LI+G  K + ++ +     ++    L P+   +N MI       N ++A  + 
Sbjct: 576 DIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLY 635

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +++G   +  TY+ LI G  K G +     ++ EM  K I P   A+T LI+ LC  
Sbjct: 636 KKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNK 695

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G+ E A K  + M   +++P V IY +L+  H ++GN  +A  L +EM+  GL P  
Sbjct: 696 GQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDN 752



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 166/365 (45%), Gaps = 36/365 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF+    ++ +G   S+ S N+++    K       + ++   LE+    N  T  TL
Sbjct: 315 EKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES-GLANVFTFNTL 373

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +S LCK G++    ++ D +  K  SP V                               
Sbjct: 374 LSWLCKEGKMNEACNLWDEVIAKGISPNV------------------------------- 402

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               ++Y+ I+    +  N+ +A  VY+EML  GF+ N+  +T  +  Y + G IE A  
Sbjct: 403 ----VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 458

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +   M++A + P D T  ++I+G  KA R  E      + +S+  +P+C  +N +I    
Sbjct: 459 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 518

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + GN   A+ +     + G +P+ +TY+ LI G+ K   I   LKL  +M+ K +   + 
Sbjct: 519 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 578

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY +LI   C+   ++ A +    ++   L P   IY S++       N  +A+ L ++M
Sbjct: 579 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 638

Query: 365 VSEGL 369
           V+EG+
Sbjct: 639 VNEGI 643



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 167/359 (46%), Gaps = 1/359 (0%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           + RG  L   +++  +H++     +     + + M      P E T  ++I+A  K G +
Sbjct: 185 KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 244

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              + + D +     S  + V TSL+     +  +   +VL+  +    ++ + + YS++
Sbjct: 245 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 304

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K  N+E A   Y EM  +G  ++ +   + +  Y +    + A  +  +   +GL
Sbjct: 305 IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL 364

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                TFN L+    K  ++ E+ +  ++++++ + P+  ++N +I   C   N   A  
Sbjct: 365 ANV-FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 423

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +    LD GF+PN +T++ L+ GY K+G+I+    +++ M+  +I PT      +I  LC
Sbjct: 424 VYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 483

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + G+  E    F    S   VP    Y +++   +++GN   A ++  EM   G+ PST
Sbjct: 484 KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 542



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 159/344 (46%), Gaps = 1/344 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
             GF+ + ++F  L+    K    +  + I+  M +    P + T+  +I  LCK G+  
Sbjct: 430 DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 489

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              D+ ++   +   P  +   ++I   I+E  I     + + M    +   T+ Y+ ++
Sbjct: 490 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLI 549

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  N++ AL +  +M ++G   +   Y T I  +C+   ++ A+ L+ E+  AGL 
Sbjct: 550 DGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 609

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N +I G      +EE++   ++M++  +      +  +I  L + G    A+ +
Sbjct: 610 PNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDI 669

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            T  L KG  P++  ++ LI G   +G+ +   K+  +M  K++ P++  Y +LI+   +
Sbjct: 670 HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 729

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKAL 358
            G L+EA +    M    LVP    Y+ LV G     GN ++ L
Sbjct: 730 EGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFSRDL 773



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 166/401 (41%), Gaps = 36/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +   G+     +F ++I    K        R+   M+   +  N A   +L+ 
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 271

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G L++ + +++ I      P  +  + LI    +   IE+       M  K +  
Sbjct: 272 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 331

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA---- 182
              + + I+   +K ++ ++A  ++ + L+ G  AN F + T +   C+ GK+ EA    
Sbjct: 332 SVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLW 390

Query: 183 ---------------------NC----------LMQEMENAGLKPYDETFNLLIEGCAKA 211
                                +C          + +EM + G  P   TF +L++G  K 
Sbjct: 391 DEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKK 450

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             IE + S   +M    +LP+ +    +I+ LC+ G + +   +    + +GF P  + Y
Sbjct: 451 GDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPY 510

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I G+ KEG I     +Y EM    I+P+   YTSLI   C+   ++ A K    MK 
Sbjct: 511 NTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 570

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L   +  Y +L+    ++ +   A  L  E+   GL P+
Sbjct: 571 KGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPN 611



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 130/265 (49%), Gaps = 1/265 (0%)

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
            + LL+ M     I     ++ ++ A VK  N+  AL + ++M+  G S N  V T+ + 
Sbjct: 212 ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMK 271

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
            YC  G +  A  L+ E+  +GL P   T+++LI+GC K   IE++  +  +M ++ +  
Sbjct: 272 GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 331

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           S  + N ++    +C + + A  M   AL+ G + N  T++ L+    KEG++ E   L+
Sbjct: 332 SVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLW 390

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            E+  K ISP + +Y ++I   C+   +  A K +K M  +   P    +  L+  + +K
Sbjct: 391 DEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKK 450

Query: 352 GNKAKALHLCEEMVSEGLKPSTSYL 376
           G+   A  +   M    + P+ + L
Sbjct: 451 GDIENAFSIFHRMKDANILPTDTTL 475



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 1/279 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R FE   D+      +GF  + + +NT+I    K    +L   +Y+ M E    P+  T 
Sbjct: 487 RSFE-GRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 545

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI   CKG  +   + +L+ +  K     +    +LI    +   ++    LL  +  
Sbjct: 546 TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 605

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  +   Y+ ++     M N+E A+ +Y++M+  G   +   YT+ I    + G++  
Sbjct: 606 AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY 665

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A+ +  EM + G+ P D    +LI G     + E +    E M  + ++PS   +N +I 
Sbjct: 666 ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIA 725

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
              + GN ++A  +    LD+G  P+ ITY  L+ G  K
Sbjct: 726 GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 764



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   E A D+ + +   G    L ++ +LI  + KS R      I+  ML     P++  
Sbjct: 625 MNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRA 684

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LC  GQ +    +L+ ++GK   P V++  +LI    +E  ++E   L   ML
Sbjct: 685 HTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML 744

Query: 121 RKNMIHDTIAYSLIVYAKVK 140
            + ++ D I Y ++V  K K
Sbjct: 745 DRGLVPDNITYDILVNGKFK 764



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 62/144 (43%)

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           A++  +  LC   N+  A  +L      G+ P E T++ +I    KEG + E L+L  +M
Sbjct: 195 AYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDM 254

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                S  L   TSL+   C  G L  A      +    LVP    Y  L+    + GN 
Sbjct: 255 VNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNI 314

Query: 355 AKALHLCEEMVSEGLKPSTSYLCS 378
            KA     EM ++G++ S   L S
Sbjct: 315 EKAFEFYSEMKTKGIRSSVYSLNS 338


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 180/396 (45%), Gaps = 35/396 (8%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + GF  + +++  ++ V+ KS +  L   + + M E     +      +I  LCK G L 
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              ++ + +  K     +I+ T+LI       R ++G  LL+ M+++ +  D +A+S ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              VK   L  A  +++EM++RG S ++  YT+ I  +C+  ++++AN ++  M + G  
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN+LI G  KA  I++ L    +M  R ++     +N +I+  CE G  + A  +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
               + +   P+ ++Y  L+ G    GE ++ L+++ ++E                    
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
                           K + P +  Y  +I  LC+ G L EAD  F+ M+     P    
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           Y  L+  HL +G+  K+  L EE+   G     S L
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTL 600



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 177/363 (48%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R   +AF     + + G+    ++F+TLI+ +    R      +   M+E    P   T+
Sbjct: 121 RKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITL 180

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L++ LC  G++   V ++DR+      P  +    ++  + +  +    M LL++M  
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  D + YS+I+    K  +L++A  ++ EM  +GF A+  +YTT I  +C  G+ ++
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              L+++M    + P    F+ LI+   K  ++ E+    ++M+ R + P    +  +I 
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+     +AN ML L + KG  PN  T++ LI GY K   I + L+L+ +M  + +  
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y +LI   C+ GKLE A + F+ M S  + P +  Y+ L+    + G   KAL + 
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480

Query: 362 EEM 364
           E++
Sbjct: 481 EKI 483



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 172/369 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++  D+C+ +E +G + +L + + +I+   +  +  L +     +++    P+  T  T
Sbjct: 88  YDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFST 147

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G++   ++++DR+      P +I   +L+  +    ++ + ++L+ RM+   
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y  ++    K      A+ +  +M +R    ++  Y+  I   C+ G ++ A 
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EME  G K     +  LI G   A R ++       M+ RK+ P   AF+ +I   
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A  +    + +G SP+ +TY+ LI G+ KE ++ +   +   M  K   P +
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  LI+  C+   +++  + F+ M    +V     Y +L+    E G    A  L +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 364 MVSEGLKPS 372
           MVS  ++P 
Sbjct: 448 MVSRRVRPD 456



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/385 (21%), Positives = 174/385 (45%), Gaps = 24/385 (6%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R  +  +++F+ LI    K  +      +++ M++    P+  T  +LI   CK 
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            QL     MLD +  K C P +     LI    +   I++G+ L ++M  + ++ DT+ Y
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    ++  LE A  +++EM+ R    +   Y   +   C+ G+ E+A  + +++E 
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + ++     +N++I G   A +++++      +  + + P    +N MI  LC+ G+  +
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS----------- 300
           A+ +     + G SPN  TY+ LI  +  EG+  +  KL  E++    S           
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALS 605

Query: 301 -----------PTLPAYTSLISSLC--QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
                      P +  +T+L+   C  +   + +A   FK MK+    P V  Y +++  
Sbjct: 606 TLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKG 665

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPS 372
            L     ++   + ++M   G +P+
Sbjct: 666 LLNGNMISQVPGVLDQMFERGCQPN 690



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 144/306 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +E +GF   +I + TLI     + R D   ++ + M++    P+      LI 
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G+L+   ++   +  +  SP  +  TSLI    +E ++++   +L  M+ K    
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   +++++    K   ++  L ++ +M  RG  A++  Y T I  +CE GK+E A  L 
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM +  ++P   ++ +L++G       E++L   E++   K+      +N +I  +C  
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                A  +      KG  P+  TY+ +IGG  K+G + E   L+ +ME    SP    Y
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565

Query: 307 TSLISS 312
             LI +
Sbjct: 566 NILIRA 571



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 138/296 (46%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           VD+   +   R  P +I  + L   + + ++ +  + L K+M  K + H+    S+++  
Sbjct: 57  VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             + R L  A     +++K G+  ++  ++T I   C  G++ EA  L+  M   G KP 
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T N L+ G     ++ +++   ++M+     P+   +  +++ +C+ G    A  +L 
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              ++    + + YS +I G  K+G +     L+ EME K     +  YT+LI   C  G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + ++  K  + M    + P V  + +L+   +++G   +A  L +EM+  G+ P T
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 161/352 (45%), Gaps = 2/352 (0%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           LI F+ L  VV ++ + DLV  + + M L+ I + N  T+  +I+  C+  +L      +
Sbjct: 72  LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMINCCCRCRKLSLAFSAM 130

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P  +  ++LI  +  E R+ E + L+ RM+        I  + +V      
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A+++ + M++ GF  N   Y   +   C+ G+   A  L+++ME   +K     +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           +++I+G  K   ++ + +   +M  +        +  +IR  C  G       +L   + 
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +  +P+ + +S LI  + KEG+++E  +L+ EM  + ISP    YTSLI   C+  +L++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A+    +M S    P +  +  L+  + +       L L  +M   G+   T
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 138/323 (42%), Gaps = 24/323 (7%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   ++ +FN LI+   K++  D    +++ M       +  T  TLI   C+ G+L+ 
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             ++   +  +R  P ++    L+  +      E+ + + +++ +  M  D   Y++I++
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  ++ A  ++  +  +G   +   Y   IG  C+ G + EA+ L ++ME  G  P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560

Query: 197 YDETFNLLI-----EGCA--KAKRIEE---------------SLSYCEQMMSRKLLPSCS 234
              T+N+LI     EG A   AK IEE               +LS   +M+     P   
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVF 620

Query: 235 AFNEMIRRLC--ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
            F  ++R  C  E  +   A  +       G+ PN +TY+ +I G      I +V  +  
Sbjct: 621 TFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLD 680

Query: 293 EMEYKSISPTLPAYTSLISSLCQ 315
           +M  +   P     ++ IS LC+
Sbjct: 681 QMFERGCQPNAVTKSTFISGLCK 703



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 15/243 (6%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   +E+    L +  +N +IH +  + + D  W ++  +      P+  T   +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK G L     +  ++     SP       LI   + E    +   L++ + R   
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR--- 590

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC--EYGKIEEA 182
                 +S      V    L  AL     MLK G   + F +TT +  +C  E   + +A
Sbjct: 591 ----CGFS------VDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDA 640

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L + M+  G KP   T+N +I+G      I +     +QM  R   P+    +  I  
Sbjct: 641 PTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISG 700

Query: 243 LCE 245
           LC+
Sbjct: 701 LCK 703


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 174/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A ++   +  RG    + ++ T+I+ + K         + + M E    P+  T  T
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYST 236

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +LCK   +   +D+   +  K  SP V+  TSLI  +    R +E   +L  M   N
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D + +SL++    K  N+  A  V + M + G   N   Y + +  Y    ++ EA 
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEAR 356

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M   G KP   ++++LI G    KRI+E+     +M+ + L P+  ++  +I   
Sbjct: 357 KLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAF 416

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  +       G+ P+  TYS L+ G+ K+G + +  +L+  M+   + P L
Sbjct: 417 CQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNL 476

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT LI S+C+ G L  A K F  +  H L P V IY +++    ++G   +AL    +
Sbjct: 477 VMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRK 536

Query: 364 MVSEGLKPS 372
           M  +G  P+
Sbjct: 537 MEEDGCPPN 545



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 173/369 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++    + + +E  G S +  + N LI+        DL + +   +++    P   T  T
Sbjct: 107 YDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTT 166

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LCK G+    +++ D +  + C P V   T++I  + +         L+K+M    
Sbjct: 167 LINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVG 226

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + YS ++ +  K R +  AL ++  M  +G S     YT+ I   C + + +EA+
Sbjct: 227 CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEAS 286

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ EM +  + P   TF+LLI+   K   + E+    + M    + P+   +N ++   
Sbjct: 287 AMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY 346

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
                  +A  +  + + +G  P+  +YS LI GY     I E  +L+ EM ++ ++P  
Sbjct: 347 SLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNT 406

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT+LI + CQ GKL EA + FK M ++  +P +  Y  L+    ++G   KA  L   
Sbjct: 407 VSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRA 466

Query: 364 MVSEGLKPS 372
           M    LKP+
Sbjct: 467 MQGTYLKPN 475



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 151/334 (45%), Gaps = 11/334 (3%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR------IHGKRCSPMVIVNTSL 99
           + HML     P       L+SA+ +  Q    V  L +      +    C+  +++N   
Sbjct: 78  FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           ++     + ++ G  +L ++++  +    I ++ ++    K      AL ++++M+ RG 
Sbjct: 138 LM-----QHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGC 192

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + YTT I   C+ G+   A  L+++M   G +P   T++ LI+   K + + E+L 
Sbjct: 193 QPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALD 252

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
               M ++ + P+  ++  +I+ LC     K+A+ ML         P+ +T+S LI  + 
Sbjct: 253 IFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFC 312

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG + E   +   M    + P +  Y SL+       ++ EA K F +M +    P V 
Sbjct: 313 KEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVF 372

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Y  L+  +       +A  L  EM+ +GL P+T
Sbjct: 373 SYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNT 406



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/343 (20%), Positives = 134/343 (39%), Gaps = 78/343 (22%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPN 57
           RL   A D+  Y++ +G S +++S+ +LI  +    R    W+    ML  +      P+
Sbjct: 245 RLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR----WKEASAMLNEMTSLNIMPD 300

Query: 58  EATIRTLISALCKGGQ-------LQTYVDM----------------------------LD 82
             T   LI   CK G        L+T  +M                             D
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFD 360

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +  + C P V   + LI      +RI+E   L   M+ + +  +T++Y+ +++A  ++ 
Sbjct: 361 VMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLG 420

Query: 143 NLESALVVYEEM-------------------LKRGFSANSF----------------VYT 167
            L  A  ++++M                    K+G+   +F                +YT
Sbjct: 421 KLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYT 480

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I + C+ G +  A  L  E+   GL+P  + +  +I G  K   ++E+L    +M   
Sbjct: 481 ILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEED 540

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              P+  ++N +IR   +  +  +A  ++    DKGF  +E T
Sbjct: 541 GCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 182/361 (50%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F +  D C+ LE  G + ++ + N +I+   +  +    + +   +++    P+  T  T
Sbjct: 104 FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 163

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L   G++   V ++DR+    C P V+   S++  I +       + LL++M  +N
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS I+ +  +   +++A+ +++EM  +G  ++   Y + +   C+ GK  +  
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M +  + P   TFN+L++   K  +++E+    ++M++R + P+   +N ++   
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +AN ML L +    SP+ +T++ LI GY     + + +K++  +  + +    
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ L+   CQ GK++ A++ F+ M SH ++P V  Y  L+    + G   KAL + E+
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463

Query: 364 M 364
           +
Sbjct: 464 L 464



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 177/357 (49%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G    ++++N++++ + +S    L   + + M E     +  T  T+I +LC+ G + 
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +   +  K     V+   SL+  + +  +  +G +LLK M+ + ++ + I +++++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              VK   L+ A  +Y+EM+ RG S N   Y T +  YC   ++ EAN ++  M      
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TF  LI+G    KR+++ +     +  R L+ +   ++ +++  C+ G  K A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  P+ +TY  L+ G    G++++ L+++ +++   +   +  YT++I  +C+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK+E+A   F  +    + P V  Y  ++    +KG+ ++A  L  +M  +G  P+
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 164/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SL+ F+     + ++ + +LV    + +  N    N  T+  +I+  C+  +      +L
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P      +LI  +  E ++ E +VL+ RM+      D + Y+ IV    + 
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +   AL +  +M +R   A+ F Y+T I + C  G I+ A  L +EME  G+K    T+
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L+ G  KA +  +     + M+SR+++P+   FN ++    + G  ++AN +    + 
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G SPN ITY+ L+ GY  +  + E   +   M     SP +  +TSLI   C   ++++
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             K F+ +    LV     Y  LV    + G    A  L +EMVS G+ P 
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 158/327 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  + + +E +G   S++++N+L+  + K+ + +    + + M+     PN  T   L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +    K G+LQ   ++   +  +  SP +I   +L+     + R+ E   +L  M+R   
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + ++ ++     ++ ++  + V+  + KRG  AN+  Y+  +  +C+ GKI+ A  
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L QEM + G+ P   T+ +L++G     ++E++L   E +   K+      +  +I  +C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  + A  +      KG  PN +TY+ +I G  K+G + E   L  +ME    +P   
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKS 331
            Y +LI +  + G L  + K  + MKS
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKS 571



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 153/310 (49%), Gaps = 4/310 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I+FN L+ V  K  +      +Y+ M+     PN  T  TL+   C   +L    +ML
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +   +CSP ++  TSLI      +R+++GM + + + ++ ++ + + YS++V    + 
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A  +++EM+  G   +   Y   +   C+ GK+E+A  + ++++ + +      +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +IEG  K  ++E++ +    +  + + P+   +  MI  LC+ G+  +AN +L    +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G +PN+ TY+ LI  + ++G++    KL  EM+    S    +   +I  L       E
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS----GE 592

Query: 322 ADKYFKIMKS 331
            DK F  M S
Sbjct: 593 LDKSFLDMLS 602



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 125/269 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           I + + ++ + L + M+R   +   + +S    A  + +     L   +++   G + N 
Sbjct: 64  IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           +     I  +C   K   A  ++ ++   G +P   TFN LI+G     ++ E++   ++
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P    +N ++  +C  G+   A  +L    ++    +  TYS +I    ++G 
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           I   + L+ EME K I  ++  Y SL+  LC+ GK  +     K M S  +VP V  +  
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+ + +++G   +A  L +EM++ G+ P+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPN 332


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 181/353 (51%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++FNTLI  + ++   + V  +   M+E+   P+     T+I  +CK G L+   ++L
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 320

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+      P V+   +L+  +   ER EE   LL  M  K+   D + ++++V    + 
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++  + + E+ML+RG   +   YTT I  +C+ G I+EA  L++ M   G KP   ++
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++++G   A+R  ++     QM+ +    +   FN +I  LC+ G  +QA  +L   L 
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ I+YS +I G  K G+  E L+L   M  K +SP    Y+S+ S+L + G++ +
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + F  ++  ++     +Y +++    ++G   +A+     MVS G  P+ S
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 37/353 (10%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE-RIEEGMV 114
           P       ++ A C+GG  ++ V +L+ +H + C+ + + N +L+L  I ++  ++E + 
Sbjct: 155 PIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCA-LDVGNCNLVLNAICDQGSVDEALH 213

Query: 115 LLKRMLRKNMIHDTIAYSLIVYA----------------KVKM----------------- 141
           LL+ +       D ++Y+ ++                   V+M                 
Sbjct: 214 LLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC 273

Query: 142 RN--LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           RN   E    V  +M++ G + +  +Y T I   C+ G +E A+ ++  M + GLKP   
Sbjct: 274 RNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVV 333

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            +N L++G   A+R EE+     +M  +        FN ++   C+ G   +   +L   
Sbjct: 334 CYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 393

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L++G  P+ ITY+ +I G+ KEG I E + L   M      P   +YT ++  LC   + 
Sbjct: 394 LERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +A+     M           + +L+    +KG   +A+ L ++M+  G  P 
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 5/312 (1%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +++  C+ GQL++   +   +      P       ++  +    RI + + +L  M R+
Sbjct: 95  AMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 151

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y +I+ A  +     SA+ V E++  RG + +       + A C+ G ++EA
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 211

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++++ + G +P   ++N +++G   AKR        E+M+     P+   FN +I  
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G  ++ + +L   ++ G +P+   Y+ +I G  KEG ++   ++   M    + P 
Sbjct: 272 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 331

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI-YESLVGIHLEKGNKAKALHLC 361
           +  Y +L+  LC   + EE ++    M      P  D+ +  LV    + G   + + L 
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDKD-CPLDDVTFNILVDFFCQNGLVDRVIELL 390

Query: 362 EEMVSEGLKPST 373
           E+M+  G  P  
Sbjct: 391 EQMLERGCMPDV 402



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 3/243 (1%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ +V    +   LESA  +   +       N++ Y   + A C  G+I +A  ++ EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P    +++++E   +      ++   E + +R         N ++  +C+ G+  
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L      G  P+ ++Y+ ++ G         V +L  EM   +  P +  + +LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S LC+ G  E   +    M  H   P + +Y +++    ++G+   A  +   M S GLK
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 371 PST 373
           P+ 
Sbjct: 330 PNV 332



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 104/213 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   + IS+  ++  +  ++R      +   M++     N  T  TLI+ LCK G ++  
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L ++    CSP +I  +++I  + +  + +E + LL  M+ K M  +TI YS I  A
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +   +   + +++ +      +++ +Y   I + C+ G+ E A   +  M ++G  P 
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           + T+ +LI G A    ++E+     ++ S+  L
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 178/370 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++AF++   +EQ      ++ +NT+I  + K    D    +++ M      PN  T  +L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LC  G+      +L  +  ++ +P V   ++LI   ++E ++ E   L   M+++++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               + YS ++        L+ A  ++E M+ +    +   Y T I  +C+Y ++EE   
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + +EM   GL     T+N+LI+G  +A   + +    ++M+S  + P+   +N ++  LC
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +          P   TY+ +I G  K G++++   L+  +  K + P + 
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY ++IS  C+ G  EEAD  FK MK    +P    Y +L+   L  G++  +  L +EM
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597

Query: 365 VSEGLKPSTS 374
            S G     S
Sbjct: 598 RSCGFAGDAS 607



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 174/358 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    L+++  +++ + K    DL + +   M +    P      T+I  LCK   +  
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +++   +  K   P V+  +SLI  +    R  +   LL  M+ + +  D   +S ++ 
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A VK   L  A  +Y+EM+KR    +   Y++ I  +C + +++EA  + + M +    P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI+G  K KR+EE +    +M  R L+ +   +N +I+ L + G+   A  + 
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +  G  PN +TY+ L+ G  K G++++ + ++  ++   + PT+  Y  +I  +C+ 
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           GK+E+    F  +    + P V  Y +++     KG+K +A  L +EM  +G  P++ 
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 179/353 (50%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLISALCKGGQLQTYVDM 80
           S+I F+ L+  + K ++ D+V  + + M +N+  P N  T   LI+  C+  QL   + +
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYSILINCFCRRSQLPLALAV 138

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++  +SL+      +RI E + L+ +M       +T+ ++ +++    
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A+ + + M+ +G   +   Y   +   C+ G  + A  L+ +ME   L+P    
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N +I+G  K K ++++L+  ++M ++ + P+   ++ +I  LC  G    A+ +L+  +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  +P+  T+S LI  + KEG++ E  KLY EM  +SI P++  Y+SLI+  C   +L+
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA + F+ M S    P V  Y +L+    +     + + +  EM   GL  +T
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 166/372 (44%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F+V   +   ++  G   +  +++ LI+   +  +  L   +   M++    PN  T
Sbjct: 94  MNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 153

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C   ++   V ++D++      P  +   +LI  +    +  E M L+ RM+
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    D + Y ++V    K  + + A  +  +M +        +Y T I   C+Y  ++
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L +EME  G++P   T++ LI       R  ++      M+ RK+ P    F+ +I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+ +TYS LI G+     + E  +++  M  K   
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI   C+  ++EE  + F+ M    LV     Y  L+    + G+   A  +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453

Query: 361 CEEMVSEGLKPS 372
            +EMVS+G+ P+
Sbjct: 454 FKEMVSDGVPPN 465



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 165/356 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  + ++FNTLIH +   ++      +   M+     P+  T   +++ LCK G     
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++L+++   +  P V++  ++I  + + + +++ + L K M  K +  + + YS ++  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                    A  +  +M++R  + + F ++  I A+ + GK+ EA  L  EM    + P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ LI G     R++E+    E M+S+   P    +N +I+  C+    ++   +  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +G   N +TY+ LI G  + G+     +++ EM    + P +  Y +L+  LC+ G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           KLE+A   F+ ++   + P +  Y  ++    + G       L   +  +G+KP  
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 170/367 (46%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+  ++++ ++L++    S R      +   M      PN  T  TLI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L    +    + ++DR+  K C P ++    ++  + +    +    LL +M +  + 
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + Y+ I+    K ++++ AL +++EM  +G   N   Y++ I   C YG+  +A+ L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M    + P   TF+ LI+   K  ++ E+    ++M+ R + PS   ++ +I   C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  M    + K   P+ +TY+ LI G+ K   ++E ++++ EM  + +      
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  LI  L Q G  + A + FK M S  + P +  Y +L+    + G   KA+ + E + 
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493

Query: 366 SEGLKPS 372
              ++P+
Sbjct: 494 RSKMEPT 500



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 141/300 (47%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   V +   +   R  P +I  + L+  I +  + +  + L ++M    + H+   YS
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL V  +M+K G+  N    ++ +  YC   +I EA  L+ +M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   TFN LI G     +  E+++  ++M+++   P    +  ++  LC+ G+   A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L         P  + Y+ +I G  K   + + L L+ EME K I P +  Y+SLIS 
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  G+  +A +    M    + P V  + +L+   +++G   +A  L +EMV   + PS
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 124/270 (45%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + E ++++ + L   M++       I +S ++ A  KM   +  + + E+M   G   N 
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y+  I  +C   ++  A  ++ +M   G +P   T + L+ G   +KRI E+++  +Q
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M      P+   FN +I  L     A +A  ++   + KG  P+ +TY  ++ G  K G+
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
                 L  +ME   + P +  Y ++I  LC+   +++A   FK M++  + P V  Y S
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L+      G  + A  L  +M+   + P  
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDV 326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 144/307 (46%), Gaps = 36/307 (11%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R    S++++++LI+     DR D   ++++ M+    +P+  T  TLI   CK     
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK----- 408

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                                          +R+EEGM + + M ++ ++ +T+ Y++++
Sbjct: 409 ------------------------------YKRVEEGMEVFREMSQRGLVGNTVTYNILI 438

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +  + + A  +++EM+  G   N   Y T +   C+ GK+E+A  + + ++ + ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N++IEG  KA ++E+       +  + + P   A+N MI   C  G+ ++A+ +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                + G  PN   Y+ LI    ++G+ +   +L  EM     +    +   L++++  
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-ASTIGLVTNMLH 617

Query: 316 CGKLEEA 322
            G+L+++
Sbjct: 618 DGRLDKS 624



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 96/200 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   +V R + QRG   + +++N LI  + ++   D+   I++ M+ +   PN  T  TL
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G+L+  + + + +   +  P +     +I  + +  ++E+G  L   +  K +
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D +AY+ ++    +  + E A  +++EM + G   NS  Y T I A    G  E +  
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592

Query: 185 LMQEMENAGLKPYDETFNLL 204
           L++EM + G      T  L+
Sbjct: 593 LIKEMRSCGFAGDASTIGLV 612


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 179/372 (48%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            ++AF++   +EQ      ++ +NT+I  + K    D    +++ M      PN  T  +L
Sbjct: 852  DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 911

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            IS LC  G+      +L  +  ++ +P V   ++LI   ++E ++ E   L   M+++++
Sbjct: 912  ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
                + YS ++        L+ A  ++E M+ +    +   Y T I  +C+Y ++EE   
Sbjct: 972  DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            + +EM   GL     T+N+LI+G  +A   + +    ++M+S  + P+   +N ++  LC
Sbjct: 1032 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 1091

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
            + G  ++A  +          P   TY+ +I G  K G++++   L+  +  K + P + 
Sbjct: 1092 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 1151

Query: 305  AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            AY ++IS  C+ G  EEAD  FK MK    +P    Y +L+   L  G++  +  L +EM
Sbjct: 1152 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211

Query: 365  VSEGLKPSTSYL 376
             S G     S +
Sbjct: 1212 RSCGFAGDASTI 1223



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 174/357 (48%)

Query: 17   RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
            +G    L+++  +++ + K    DL + +   M +    P      T+I  LCK   +  
Sbjct: 829  KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 888

Query: 77   YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             +++   +  K   P V+  +SLI  +    R  +   LL  M+ + +  D   +S ++ 
Sbjct: 889  ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 948

Query: 137  AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
            A VK   L  A  +Y+EM+KR    +   Y++ I  +C + +++EA  + + M +    P
Sbjct: 949  AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 1008

Query: 197  YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               T+N LI+G  K KR+EE +    +M  R L+ +   +N +I+ L + G+   A  + 
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 1068

Query: 257  TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               +  G  PN +TY+ L+ G  K G++++ + ++  ++   + PT+  Y  +I  +C+ 
Sbjct: 1069 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 1128

Query: 317  GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK+E+    F  +    + P V  Y +++     KG+K +A  L +EM  +G  P++
Sbjct: 1129 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 1185



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 179/353 (50%), Gaps = 2/353 (0%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLISALCKGGQLQTYVDM 80
            S+I F+ L+  + K ++ D+V  + + M +N+  P N  T   LI+  C+  QL   + +
Sbjct: 694  SIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYSILINCFCRRSQLPLALAV 752

Query: 81   LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
            L ++      P ++  +SL+      +RI E + L+ +M       +T+ ++ +++    
Sbjct: 753  LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812

Query: 141  MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                  A+ + + M+ +G   +   Y   +   C+ G  + A  L+ +ME   L+P    
Sbjct: 813  HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 872

Query: 201  FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            +N +I+G  K K ++++L+  ++M ++ + P+   ++ +I  LC  G    A+ +L+  +
Sbjct: 873  YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932

Query: 261  DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            ++  +P+  T+S LI  + KEG++ E  KLY EM  +SI P++  Y+SLI+  C   +L+
Sbjct: 933  ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992

Query: 321  EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            EA + F+ M S    P V  Y +L+    +     + + +  EM   GL  +T
Sbjct: 993  EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 168/352 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+    ++  +L++   + +R      +   M+E    P+      +I +LCK  ++   
Sbjct: 253 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 312

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D    I  K   P V+  T+L+  +    R  +   LL  M++K +  + I YS ++ A
Sbjct: 313 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 372

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK   +  A  ++EEM++     +   Y++ I   C + +I+EAN +   M + G    
Sbjct: 373 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 432

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N LI G  KAKR+E+ +    +M  R L+ +   +N +I+   + G+  +A    +
Sbjct: 433 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 492

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G SP+  TY+ L+GG    GE+++ L ++ +M+ + +   +  YT++I  +C+ G
Sbjct: 493 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           K+EEA   F  +    L P +  Y +++     KG   +   L  +M  EGL
Sbjct: 553 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 174/372 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ ++V   + + +E  G    L +FN +I+      +  L   I   ML+    P+  T
Sbjct: 201 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 260

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           I +L++  C+  ++   V ++D++      P ++   ++I  + + +R+ +     K + 
Sbjct: 261 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 320

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           RK +  + + Y+ +V           A  +  +M+K+  + N   Y+  + A+ + GK+ 
Sbjct: 321 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 380

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L +EM    + P   T++ LI G     RI+E+    + M+S+  L    ++N +I
Sbjct: 381 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 440

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+    +    +      +G   N +TY+ LI G+ + G++ +  + + +M++  IS
Sbjct: 441 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 500

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y  L+  LC  G+LE+A   F+ M+   +   +  Y +++    + G   +A  L
Sbjct: 501 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 560

Query: 361 CEEMVSEGLKPS 372
              +  +GLKP 
Sbjct: 561 FCSLSLKGLKPD 572



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 166/372 (44%)

Query: 1    MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
            M  F+V   +   ++  G   +  +++ LI+   +  +  L   +   M++    PN  T
Sbjct: 708  MNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 767

Query: 61   IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            + +L++  C   ++   V ++D++      P  +   +LI  +    +  E M L+ RM+
Sbjct: 768  LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 827

Query: 121  RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             K    D + Y ++V    K  + + A  +  +M +        +Y T I   C+Y  ++
Sbjct: 828  AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 887

Query: 181  EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            +A  L +EME  G++P   T++ LI       R  ++      M+ RK+ P    F+ +I
Sbjct: 888  DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 947

Query: 241  RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                + G   +A  +    + +   P+ +TYS LI G+     + E  +++  M  K   
Sbjct: 948  DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 1007

Query: 301  PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            P +  Y +LI   C+  ++EE  + F+ M    LV     Y  L+    + G+   A  +
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067

Query: 361  CEEMVSEGLKPS 372
             +EMVS+G+ P+
Sbjct: 1068 FKEMVSDGVPPN 1079



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 165/355 (46%)

Query: 18   GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
            G+  + ++FNTLIH +   ++      +   M+     P+  T   +++ LCK G     
Sbjct: 795  GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 78   VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++L+++   +  P V++  ++I  + + + +++ + L K M  K +  + + YS ++  
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 138  KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                     A  +  +M++R  + + F ++  I A+ + GK+ EA  L  EM    + P 
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 198  DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              T++ LI G     R++E+    E M+S+   P    +N +I+  C+    ++   +  
Sbjct: 975  IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034

Query: 258  LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                +G   N +TY+ LI G  + G+     +++ EM    + P +  Y +L+  LC+ G
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094

Query: 318  KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            KLE+A   F+ ++   + P +  Y  ++    + G       L   +  +G+KP 
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 170/367 (46%)

Query: 6    VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            +A  V   + + G+  ++++ ++L++    S R      +   M      PN  T  TLI
Sbjct: 748  LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 807

Query: 66   SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              L    +    + ++DR+  K C P ++    ++  + +    +    LL +M +  + 
Sbjct: 808  HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 867

Query: 126  HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
               + Y+ I+    K ++++ AL +++EM  +G   N   Y++ I   C YG+  +A+ L
Sbjct: 868  PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 927

Query: 186  MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            + +M    + P   TF+ LI+   K  ++ E+    ++M+ R + PS   ++ +I   C 
Sbjct: 928  LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 987

Query: 246  CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 +A  M    + K   P+ +TY+ LI G+ K   ++E ++++ EM  + +      
Sbjct: 988  HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047

Query: 306  YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            Y  LI  L Q G  + A + FK M S  + P +  Y +L+    + G   KA+ + E + 
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 1107

Query: 366  SEGLKPS 372
               ++P+
Sbjct: 1108 RSKMEPT 1114



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 141/300 (47%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   V +   +   R  P +I  + L+  I +  + +  + L ++M    + H+   YS
Sbjct: 675 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL V  +M+K G+  N    ++ +  YC   +I EA  L+ +M   
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   TFN LI G     +  E+++  ++M+++   P    +  ++  LC+ G+   A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L         P  + Y+ +I G  K   + + L L+ EME K I P +  Y+SLIS 
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  G+  +A +    M    + P V  + +L+   +++G   +A  L +EMV   + PS
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 145/301 (48%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   +D+   +   R  P ++    L+  I++ ++ +  + L K+M    + +D   ++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++        +  AL +  +MLK G+  +     + +  +C   ++ +A  L+ +M   
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G KP    +N +I+   K KR+ ++  + +++  + + P+   +  ++  LC       A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L+  + K  +PN ITYS L+  + K G++ E  +L+ EM   SI P +  Y+SLI+ 
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC   +++EA++ F +M S   +  V  Y +L+    +       + L  EM   GL  +
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467

Query: 373 T 373
           T
Sbjct: 468 T 468



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 124/269 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + E ++++ + L   M++       I +S ++ A  KM   +  + + E+M   G   N 
Sbjct: 671 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 730

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y+  I  +C   ++  A  ++ +M   G +P   T + L+ G   +KRI E+++  +Q
Sbjct: 731 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 790

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M      P+   FN +I  L     A +A  ++   + KG  P+ +TY  ++ G  K G+
Sbjct: 791 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 850

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
                 L  +ME   + P +  Y ++I  LC+   +++A   FK M++  + P V  Y S
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 910

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+      G  + A  L  +M+   + P 
Sbjct: 911 LISCLCNYGRWSDASRLLSDMIERKINPD 939



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/401 (20%), Positives = 165/401 (41%), Gaps = 53/401 (13%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD  + +E++G   +++++  L++ +  S R     R+   M++    PN  T   L+ 
Sbjct: 312 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 371

Query: 67  ALCKGGQ-------------------------------LQTYVD----MLDRIHGKRCSP 91
           A  K G+                               L   +D    M D +  K C  
Sbjct: 372 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 431

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
            V+   +LI    + +R+E+GM L + M ++ ++ +T+ Y+ ++    +  +++ A   +
Sbjct: 432 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 491

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            +M   G S + + Y   +G  C+ G++E+A  + ++M+   +     T+  +I G  K 
Sbjct: 492 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 551

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            ++EE+ S    +  + L P    +  M+  LC  G   +   + T    +G   N+ T 
Sbjct: 552 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 611

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           S        +G+I    +L  +M     +P+L     + S +C+        K   ++++
Sbjct: 612 S--------DGDITLSAELIKKMLSCGYAPSL--LKDIKSGVCK--------KALSLLRA 653

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            S     D  E L    L +     A+ L  EMV     PS
Sbjct: 654 FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPS 694



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 123/265 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           +++ ++ + + L   M++       + ++ ++ A VK++  +  + + ++M   G   + 
Sbjct: 164 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 223

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + +   I  +C   ++  A  ++ +M   G +P   T   L+ G  +  R+ +++S  ++
Sbjct: 224 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P   A+N +I  LC+      A         KG  PN +TY+ L+ G      
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
             +  +L  +M  K I+P +  Y++L+ +  + GK+ EA + F+ M   S+ P +  Y S
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEG 368
           L+          +A  + + MVS+G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKG 428



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 96/200 (48%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E   +V R + QRG   + +++N LI  + ++   D+   I++ M+ +   PN  T  TL
Sbjct: 1027 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 1086

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            +  LCK G+L+  + + + +   +  P +     +I  + +  ++E+G  L   +  K +
Sbjct: 1087 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 1146

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              D +AY+ ++    +  + E A  +++EM + G   NS  Y T I A    G  E +  
Sbjct: 1147 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 1206

Query: 185  LMQEMENAGLKPYDETFNLL 204
            L++EM + G      T  L+
Sbjct: 1207 LIKEMRSCGFAGDASTIGLV 1226



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/377 (21%), Positives = 153/377 (40%), Gaps = 23/377 (6%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    ++S+NTLI+   K+ R +   ++++ M +     N  T  TLI    + G +  
Sbjct: 427 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 486

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             +   ++     SP +     L+  +     +E+ +V+ + M ++ M  D + Y+ ++ 
Sbjct: 487 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 546

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +E A  ++  +  +G   +   YTT +   C  G + E   L  +M+  GL  
Sbjct: 547 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 606

Query: 197 YDETFNLLIEG--CAKAKRIEESLS--YCEQMMSRKLLPSCSAFNEMIRRLC-----ECG 247
            D T   L +G     A+ I++ LS  Y   ++       C     ++R        +  
Sbjct: 607 NDCT---LSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYR 663

Query: 248 NAKQANGMLTLALDKGFS-----------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
                NG+  L LD   +           P+ I +S L+   AK  +   V+ L  +M+ 
Sbjct: 664 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 723

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             I      Y+ LI+  C+  +L  A      M      P +    SL+  +      ++
Sbjct: 724 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 783

Query: 357 ALHLCEEMVSEGLKPST 373
           A+ L ++M   G +P+T
Sbjct: 784 AVALVDQMFVTGYQPNT 800


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 177/363 (48%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R   +AF     + + G+    ++F+TLI+ +    R      +   M+E    P   T+
Sbjct: 121 RKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITL 180

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L++ LC  G++   V ++DR+      P  +    ++  + +  +    M LL++M  
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  D + YS+I+    K  +L++A  ++ EM  +GF A+  +YTT I  +C  G+ ++
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              L+++M    + P    F+ LI+   K  ++ E+    ++M+ R + P    +  +I 
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+     +AN ML L + KG  PN  T++ LI GY K   I + L+L+ +M  + +  
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y +LI   C+ GKLE A + F+ M S  + P +  Y+ L+    + G   KAL + 
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480

Query: 362 EEM 364
           E++
Sbjct: 481 EKI 483



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 178/357 (49%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + GF  + +++  ++ V+ KS +  L   + + M E     +      +I  LCK G L 
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              ++ + +  K     +I+ T+LI       R ++G  LL+ M+++ +  D +A+S ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              VK   L  A  +++EM++RG S ++  YT+ I  +C+  ++++AN ++  M + G  
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN+LI G  KA  I++ L    +M  R ++     +N +I+  CE G  + A  +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               + +   P+ ++Y  L+ G    GE ++ L+++ ++E   +   +  Y  +I  +C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             K+++A   F  +    + P V  Y  ++G   +KG+ ++A  L  +M  +G  P+
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 172/369 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++  D+C+ +E +G + +L + + +I+   +  +  L +     +++    P+  T  T
Sbjct: 88  YDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFST 147

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G++   ++++DR+      P +I   +L+  +    ++ + ++L+ RM+   
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y  ++    K      A+ +  +M +R    ++  Y+  I   C+ G ++ A 
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EME  G K     +  LI G   A R ++       M+ RK+ P   AF+ +I   
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A  +    + +G SP+ +TY+ LI G+ KE ++ +   +   M  K   P +
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  LI+  C+   +++  + F+ M    +V     Y +L+    E G    A  L +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447

Query: 364 MVSEGLKPS 372
           MVS  ++P 
Sbjct: 448 MVSRRVRPD 456



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 144/306 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +E +GF   +I + TLI     + R D   ++ + M++    P+      LI 
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G+L+   ++   +  +  SP  +  TSLI    +E ++++   +L  M+ K    
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   +++++    K   ++  L ++ +M  RG  A++  Y T I  +CE GK+E A  L 
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM +  ++P   ++ +L++G       E++L   E++   K+      +N +I  +C  
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                A  +      KG  P+  TY+ +IGG  K+G + E   L+ +ME    SP    Y
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565

Query: 307 TSLISS 312
             LI +
Sbjct: 566 NILIRA 571



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 138/296 (46%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           VD+   +   R  P +I  + L   + + ++ +  + L K+M  K + H+    S+++  
Sbjct: 57  VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             + R L  A     +++K G+  ++  ++T I   C  G++ EA  L+  M   G KP 
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T N L+ G     ++ +++   ++M+     P+   +  +++ +C+ G    A  +L 
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              ++    + + YS +I G  K+G +     L+ EME K     +  YT+LI   C  G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + ++  K  + M    + P V  + +L+   +++G   +A  L +EM+  G+ P T
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 161/352 (45%), Gaps = 2/352 (0%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           LI F+ L  VV ++ + DLV  + + M L+ I + N  T+  +I+  C+  +L      +
Sbjct: 72  LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMINCCCRCRKLSLAFSAM 130

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P  +  ++LI  +  E R+ E + L+ RM+        I  + +V      
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A+++ + M++ GF  N   Y   +   C+ G+   A  L+++ME   +K     +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           +++I+G  K   ++ + +   +M  +        +  +IR  C  G       +L   + 
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +  +P+ + +S LI  + KEG+++E  +L+ EM  + ISP    YTSLI   C+  +L++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A+    +M S    P +  +  L+  + +       L L  +M   G+   T
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/319 (21%), Positives = 129/319 (40%), Gaps = 70/319 (21%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R  +  +++F+ LI    K  +      +++ M++    P+  T  +LI   CK 
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            QL     MLD +  K C P +     LI    +   I++G+ L ++M  + ++ DT+ Y
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA--------- 182
           + ++    ++  LE A  +++EM+ R    +   Y   +   C+ G+ E+A         
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485

Query: 183 ----------NCLMQEMENA----------------GLKPYDETFNLLIEGCAKAKRIEE 216
                     N ++  M NA                G+KP  +T+N++I G         
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG--------- 536

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
                                     LC+ G+  +A+ +     + G SPN  TY+ LI 
Sbjct: 537 --------------------------LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570

Query: 277 GYAKEGEIQEVLKLYYEME 295
            +  EG+  +  KL  E++
Sbjct: 571 AHLGEGDATKSAKLIEEIK 589


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 178/372 (47%), Gaps = 1/372 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   + +RG   ++ ++  +I+ + K  + +   RI   M+E    P+  T   LI 
Sbjct: 93  AINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALID 152

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G ++   ++LD +H   C+P       LI    +++ +   M LL +ML   +  
Sbjct: 153 GYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTP 212

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ +++ + K+  L+SA  +   M + G   + + Y+ FI   C+ G+IEEAN L 
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLF 272

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             ++  G+K  +  +  LI+G  KA +++++ S  ++M++   LP+ S +N +I  LC+ 
Sbjct: 273 NSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKE 332

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A  ++   + KG      TY+ LI    KEG+     ++  +M      P +  Y
Sbjct: 333 RKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIY 392

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+ I + C  G ++EA+    +M    ++P    Y  ++  +   G    A  + + M  
Sbjct: 393 TAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFD 452

Query: 367 EGLKPS-TSYLC 377
            G  PS  +Y C
Sbjct: 453 TGCDPSHHTYSC 464



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 168/367 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + ++G   + +S+  LIH + +  R D    I++ M E+  YP   T   ++ 
Sbjct: 23  AFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVH 82

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL + G+    +++   +  + C P +   T +I  + +E ++EEG  +L  M+ K ++ 
Sbjct: 83  ALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVP 142

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ ++    K   +E+A  + + M     + N   Y   I  +C    +  A  L+
Sbjct: 143 SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL 202

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M  + L P   T+N LI G  K   ++ +      M    ++P    ++  I  LC+ 
Sbjct: 203 SKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKK 262

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++AN +     +KG   NE+ Y+ LI GY K G++ +   L   M  +   P    Y
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTY 322

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LI  LC+  K++EA    + M    L   V  Y  L+   L++G+   A  + ++MVS
Sbjct: 323 NALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVS 382

Query: 367 EGLKPST 373
            G +P  
Sbjct: 383 SGYQPDV 389



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 151/320 (47%), Gaps = 9/320 (2%)

Query: 64  LISALCKGGQL---------QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           +++  CK G L          +   + + +  K C    +  T+LI  + +  R++EG+ 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           + K+M   +       Y++IV+A  +      A+ ++ EM +RG   N   YT  I A C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           +  K+EE   ++ EM   GL P   T+N LI+G  K   +E +    + M S    P+  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +NE+I   C   N  +A  +L+  L+   +P+ +TY+ LI G  K G +    +L   M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
               + P    Y+  I +LC+ G++EEA+  F  +K   +     IY +L+  + + G  
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 355 AKALHLCEEMVSEGLKPSTS 374
             A  L + M++E   P++S
Sbjct: 301 DDANSLLDRMLTEDCLPNSS 320



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 8/369 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A+ +   + + G      +++  I  + K  R +    ++  + E     NE     
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK G++     +LDR+  + C P      +LI  + +E +++E ++L++ M++K 
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +      Y++++ A +K  + + A  + ++M+  G+  + ++YT FI A+C  G I+EA 
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +M  M   G+ P   T+ L+I+       +  +    ++M      PS   ++ +I+ L
Sbjct: 410 DMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL 469

Query: 244 C-ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             E    K  N  L  ++   F  +       +    K  + +  L+L+ +M     SP 
Sbjct: 470 LKEELTKKYKNVALCDSIPNVFFAD-------VADVWKMMKFETALELFEKMLEHGCSPN 522

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y  LI  LC+ G+L  A K F  M    + P   IY SL+    E G    A+ L  
Sbjct: 523 INTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVG 582

Query: 363 EMVSEGLKP 371
            M+  G  P
Sbjct: 583 AMMEHGHLP 591



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 75/382 (19%), Positives = 138/382 (36%), Gaps = 64/382 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+++G   + + +  LI    K+ + D    +   ML     PN +T   LI  LCK  +
Sbjct: 275 LKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERK 334

Query: 74  LQ-------------------TYV----------------DMLDRIHGKRCSPMVIVNTS 98
           +Q                   TY                  +LD++      P V + T+
Sbjct: 335 VQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTA 394

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
            I        I+E   ++  M  + ++ D + Y+L++ A   +  L  A  V + M   G
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTG 454

Query: 159 FSANSFVYTTFIG--------------AYCE---------------YGKIEEANCLMQEM 189
              +   Y+  I               A C+                 K E A  L ++M
Sbjct: 455 CDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKM 514

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G  P   T+  LI G  K  R+  +    + M  R + PS + +N ++   CE G  
Sbjct: 515 LEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIY 574

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  ++   ++ G  P   + + L  G  +EG  ++   ++  +     +    A+  L
Sbjct: 575 GDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKIL 634

Query: 310 ISSLCQCGKLEEADKYFKIMKS 331
           I  L + G  +   +   +M++
Sbjct: 635 IDGLLKNGLSDGCSELLGVMEA 656


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 169/343 (49%), Gaps = 2/343 (0%)

Query: 5   EVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI-R 62
           + A D+ R + +RG  + +  ++ T+I    K  R D   +++  ML       EA +  
Sbjct: 202 QAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYN 261

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C  G+L T +   DR+  +  +  V     L+  +  + R  E   L++ M  K
Sbjct: 262 ALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK 321

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++    K  N++ AL ++E M +RG  A    YT+ I A  + G+++E 
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  E    G++P    +N LI   + +  I+ +     +M  +++ P    +N ++R 
Sbjct: 382 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 441

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G   +A  ++     +G  P+ +TY+ LI GY+ +G++++ L++  EM  K  +PT
Sbjct: 442 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           L  Y +LI  LC+ G+ ++A+   K M  + + P    Y SL+
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 158/326 (48%), Gaps = 2/326 (0%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEE 107
           +L  +  PN  T  T+I+  C  G++Q  +D++  +  +   +P      ++I    +  
Sbjct: 176 LLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 235

Query: 108 RIEEGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           R++E + +   ML K  +  + + Y+ ++        L++AL+  + M++RG +     Y
Sbjct: 236 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 295

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              + A    G+  EA  L++EM   GL     T+N+LI G  K   ++++L   E M  
Sbjct: 296 NLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR 355

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           R +  +   +  +I  L + G  ++ + +   A+ +G  P+ + Y+ LI  ++  G I  
Sbjct: 356 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 415

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             ++  EME K I+P    Y +L+  LC  G+++EA K    M    + P +  Y +L+ 
Sbjct: 416 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 475

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  KG+   AL +  EM+++G  P+
Sbjct: 476 GYSMKGDVKDALRIRNEMMNKGFNPT 501



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 163/357 (45%), Gaps = 2/357 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLD 82
           +++NT+I       R      I + M E     PN+ T  T+IS  CK G++   V + D
Sbjct: 186 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 245

Query: 83  RIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +  K    P  ++  +LI     + +++  ++   RM+ + +      Y+L+V+A    
Sbjct: 246 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 305

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  + EEM  +G + + F Y   I  +C+ G +++A  + + M   G++    T+
Sbjct: 306 GRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 365

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI   +K  +++E+    ++ + R + P    +N +I      GN  +A  ++     
Sbjct: 366 TSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 425

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +P+++TY+ L+ G    G + E  KL  EM  + I P L  Y +LIS     G +++
Sbjct: 426 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 485

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A +    M +    P +  Y +L+    + G    A ++ +EMV  G+ P  S   S
Sbjct: 486 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 542



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 134/268 (50%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG ++++ ++N L+H +    R    + + + M       +  T   LI+  CK G ++
Sbjct: 285 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVK 344

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++ + +  +     V+  TSLI  + ++ +++E   L    +R+ +  D + Y+ ++
Sbjct: 345 KALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 404

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +     N++ A  +  EM K+  + +   Y T +   C  G+++EA  L+ EM   G++
Sbjct: 405 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 464

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G +    ++++L    +MM++   P+   +N +I+ LC+ G    A  M
Sbjct: 465 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 524

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGE 283
           +   ++ G +P++ TY  LI G   E E
Sbjct: 525 VKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 37/257 (14%)

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKA 211
           E+L++    N+  Y T I  +C  G+++ A  +M+EM E  G+ P   T+  +I G  K 
Sbjct: 175 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 234

Query: 212 KRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQA------------------ 252
            R++E++   ++M+++ ++ P    +N +I   C+ G    A                  
Sbjct: 235 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 294

Query: 253 ----------NGMLTLALD-------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
                     +G  T A +       KG + +  TY+ LI G+ KEG +++ L+++  M 
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + +  T+  YTSLI +L + G+++E DK F       + P + +Y +L+  H   GN  
Sbjct: 355 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 414

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  +  EM  + + P 
Sbjct: 415 RAFEIMGEMEKKRIAPD 431



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 108/238 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  +G +L + ++N LI+   K         I+++M          T  +LI 
Sbjct: 311 AYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 370

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL K GQ+Q    + D    +   P +++  +LI        I+    ++  M +K +  
Sbjct: 371 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 430

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  ++ A  + +EM KRG   +   Y T I  Y   G +++A  + 
Sbjct: 431 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 490

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            EM N G  P   T+N LI+G  K  + +++ +  ++M+   + P  S +  +I  L 
Sbjct: 491 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 225 MSRKLLPSCSA-FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M R  LP C+  FN M+R LC  G   +A  +L     +   PN +TY+ +I G+   G 
Sbjct: 145 MFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR----QMPRPNAVTYNTVIAGFCSRGR 200

Query: 284 IQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIY 341
           +Q  L +  EM E   I+P    Y ++IS  C+ G+++EA K F  M +   V P   +Y
Sbjct: 201 VQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMY 260

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +L+G + ++G    AL   + MV  G+
Sbjct: 261 NALIGGYCDQGKLDTALLYRDRMVERGV 288


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 183/370 (49%), Gaps = 8/370 (2%)

Query: 9   DVCRYLEQ----RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +  R++E+     GF     +FN L++ ++K+        +   ML     P+  T  +L
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LCK G++   V +L+++  + CSP  +   ++I  + +E ++EE   L   +  K +
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D   Y+ ++      RN   A+ +Y+EM  +G   + F Y   I + C  GK++EA  
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++EME +G      T+N LI+G  K KRI E+    +QM  + +  +   +N +I  LC
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +    ++A+ ++   + +G  P++ TY+ L+  + K G+I++   +   M      P + 
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582

Query: 305 AYTSLISSLCQCGKLEEADKYFKI--MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
            Y +LI+ LC+ G++E A K  +   MK  +L P    Y  ++     +    +A+ L  
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHA--YNPVIQALFRRKRSKEAVRLFR 640

Query: 363 EMVSEGLKPS 372
           EM+ +   P 
Sbjct: 641 EMIEKAEAPD 650



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 1/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + GF   + ++N+LI  + K    D   ++   M+E    PN  T  T+IS
Sbjct: 320 ALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIS 379

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  Q++    +   + GK   P V    SLI  +         M L K M  K    
Sbjct: 380 TLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHP 439

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++ +      L+ AL + +EM   G + N   Y T I  +C+  +I EA  + 
Sbjct: 440 DEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIF 499

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +ME  G+     T+N LI+G  K++R+EE+    +QM+   L P    +N ++   C+ 
Sbjct: 500 DQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKA 559

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  ++      G  P+ +TY  LI G  K G ++   KL   ++ K I+ T  AY
Sbjct: 560 GDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAY 619

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMV 365
             +I +L +  + +EA + F+ M   +  P    Y+ +  G+    G   +A+    EM+
Sbjct: 620 NPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEML 679

Query: 366 SEGLKPSTS 374
             G  P  S
Sbjct: 680 ERGYVPEFS 688



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 176/397 (44%), Gaps = 68/397 (17%)

Query: 29  LIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
           L+H + + + +  V  ++    +   + P+ +  + ++  L K G+     D+L  +   
Sbjct: 59  LLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM--- 115

Query: 88  RCSPMVIVNTSL---------------ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           + S  VI N SL               IL+ +    +E G+V            +T  Y+
Sbjct: 116 KISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVA-----------NTHFYN 164

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++   V    L+   + +  M+ RG   +   +   I A C   +I  A  LM+EME+ 
Sbjct: 165 FLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDF 224

Query: 193 GLKPYDETFNLLIEG---------------------CA--------------KAKRIEES 217
           GL P ++TF  +++G                     C               K  RIEE+
Sbjct: 225 GLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEA 284

Query: 218 LSYCEQMMSRK-LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           L + E+M  R+   P    FN ++  L + G+ K A  ++ + L +GF P+  TY+ LI 
Sbjct: 285 LRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLIS 344

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G  K GE+ E +K+  +M  +  SP    Y ++IS+LC+  ++EEA K   ++    ++P
Sbjct: 345 GLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILP 404

Query: 337 GVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPS 372
            V  Y SL+ G+ L + N   A+ L +EM ++G  P 
Sbjct: 405 DVCTYNSLIQGLCLSR-NHTVAMELYKEMKTKGCHPD 440



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 146/310 (47%), Gaps = 1/310 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   L  +G    + ++N+LI  +  S  + +   +Y+ M     +P+E T   L
Sbjct: 388 EEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNML 447

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +LC  G+LQ  +++L  +    C+  VI   +LI    + +RI E   +  +M  + +
Sbjct: 448 IDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGV 507

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +++ Y+ ++    K   +E A  + ++M+  G   + F Y + +  +C+ G I++A  
Sbjct: 508 SRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAAD 567

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++Q M + G +P   T+  LI G  KA R+E +      +  + +  +  A+N +I+ L 
Sbjct: 568 IVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALF 627

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPTL 303
               +K+A  +    ++K  +P+ +TY  +  G  +  G I E +    EM  +   P  
Sbjct: 628 RRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEF 687

Query: 304 PAYTSLISSL 313
            ++  L   L
Sbjct: 688 SSFYMLAEGL 697



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 1/217 (0%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G  AN+  Y   +    +  K++        M + G++P   TFN+LI+   +A +I  +
Sbjct: 155 GVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPA 214

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   E+M    LLP    F  +++   E GN   A  +    ++ G     +T + L+ G
Sbjct: 215 ILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNG 274

Query: 278 YAKEGEIQEVLKLYYEMEYK-SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           + KEG I+E L+   EM  +    P    +  L++ L + G ++ A +   +M      P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  Y SL+    + G   +A+ +  +M+     P+T
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNT 371


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 172/359 (47%), Gaps = 7/359 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  ++ ++N L+  +T+  R+D    ++Q M++    P+  T   L+  LC+  QL+  
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L R+    C P   +  +LI    + +   +    L  M++ + +   + Y+ IV  
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K      A+ + +EM  +G S N + Y   +   CE  K++EA  +++EM   G  P 
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N  I+G  K  R++E+  +  +M    + P   ++  +I  LC+ G+   A+ ML 
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              ++G +P+ +TYS LI G+ K GE++  + L   M      P + AY SL+ +L + G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            + +A+     M+     P V  Y + +      E+  KAKA+   + MV  G  P+ S
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVF--DRMVERGCTPNAS 355



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 160/353 (45%), Gaps = 14/353 (3%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N LI   +K+      ++    M++N   P   T   ++  LCK  + +  V +LD + 
Sbjct: 80  YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMR 139

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            K CSP +     ++  + +E +++E   +L+ M  +    D + Y+  +    K   ++
Sbjct: 140 DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD 199

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A      M     + +   YTT I   C+ G ++ A+ ++  M N G  P   T++ LI
Sbjct: 200 EARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLI 256

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G  K   +E ++   + M+     P+  A+N ++  L   G+  +A  ML     +GF+
Sbjct: 257 DGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFT 316

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA----------YTSLISSLCQ 315
           P+ ++Y+  I G  K   +++   ++  M  +  +P   +          YT L+  LC+
Sbjct: 317 PDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCK 376

Query: 316 CGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            G+ +EA   F K++      P V  Y  ++  H ++    KAL + ++M+ +
Sbjct: 377 GGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK 429



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 170/371 (45%), Gaps = 15/371 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S ++ ++N ++  + +  + D   ++ + M     +P+  T  + I  LCK  +
Sbjct: 138 MRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 197

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +      L R+     +P V+  T++I  + +   ++    +L  M  +    D + YS 
Sbjct: 198 VDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSS 254

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E A+ + + MLK G   N   Y + +GA    G I +A  ++ EME  G
Sbjct: 255 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 314

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI----------RRL 243
             P   ++N  I+G  KA+R++++ +  ++M+ R   P+ S+++ +I            L
Sbjct: 315 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGL 374

Query: 244 CECGNAKQANGMLTLALDKGF-SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           C+ G   +A  + +  LD+    P+   Y+ ++  + K  +I + L+++ +M  K+    
Sbjct: 375 CKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNV 434

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  +  L+  LC   +L +A+     M     +P    Y +LV    + G  A AL L E
Sbjct: 435 V-TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 493

Query: 363 EMVSEGLKPST 373
           E V  G  P  
Sbjct: 494 EAVKGGCVPDV 504



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 158/336 (47%), Gaps = 12/336 (3%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++L +   +  ++S+ T+I+ + KS   D   R+  HM      P+  T  +LI   CKG
Sbjct: 203 KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKG 262

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+++  + +LD +    C P ++   SL+  + +   I +   +L  M R+    D ++Y
Sbjct: 263 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 322

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANS----------FVYTTFIGAYCEYGKIEE 181
           +  +    K   ++ A  V++ M++RG + N+           +YT  +   C+ G+ +E
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDE 382

Query: 182 ANCLMQEMENAGLKPYDETF-NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           A  L  ++ +  +   D  F N++++   K ++I+++L   +QM+ +    +   +N ++
Sbjct: 383 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILV 441

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC       A  ML   +D+GF P+ +TY  L+    K G+    L+L+ E       
Sbjct: 442 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 501

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           P +  Y++LI+ L      EEA   F  +     VP
Sbjct: 502 PDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVP 537



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 157/340 (46%), Gaps = 15/340 (4%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG+   ++++N+ I  + K DR D   +    M      P+  +  T+I+ LCK G L +
Sbjct: 176 RGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDS 232

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              MLD +  + C+P V+  +SLI    +   +E  M LL  ML+     + +AY+ ++ 
Sbjct: 233 ASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG 292

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  ++ ++  A  +  EM +RGF+ +   Y   I   C+  ++++A  +   M   G  P
Sbjct: 293 ALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 352

Query: 197 YDETFNLLI----------EGCAKAKRIEESLSYCEQMMSRKLL-PSCSAFNEMIRRLCE 245
              ++++LI          +G  K  R +E+ +   +++  K+  P    +N M+   C+
Sbjct: 353 NASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 412

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  +    L+K    N +T++ L+ G   +  + +   +   M  +   P    
Sbjct: 413 RRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 471

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           Y +L+ ++C+CGK   A + F+       VP V  Y +L+
Sbjct: 472 YGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALI 511



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 12/248 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI- 65
           A D+   +E+RGF+  ++S+N  I  + K++R      ++  M+E    PN ++   LI 
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV 362

Query: 66  ---------SALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVL 115
                      LCKGG+      +  ++  ++ C P V     ++    +  +I++ + +
Sbjct: 363 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 422

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            K+ML KN  +  + ++++V+       L  A  +   M+  GF  +   Y T + A C+
Sbjct: 423 HKQMLEKNCCN-VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCK 481

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK   A  L +E    G  P   T++ LI G       EE+     +++ R+ +P    
Sbjct: 482 CGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541

Query: 236 FNEMIRRL 243
              + R+L
Sbjct: 542 LGLLHRKL 549



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++N L+H +   DR      +   M++    P+  T  TL+ A+CK G+    +++ 
Sbjct: 433 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 492

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +      C P V+  ++LI  ++ E   EE  +L  +++ +  + D     L+ + K+K+
Sbjct: 493 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL-HRKLKL 551

Query: 142 RN 143
            N
Sbjct: 552 LN 553


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 178/369 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+   + + +E  G   ++ +F   I V+ ++ + D  + I++ M +    P+  T   L
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVL 303

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I ALC  GQL+   ++  ++      P  ++  +L+ +      ++       +M     
Sbjct: 304 IDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGY 363

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D + ++++V    K R+ + A   ++ M K+G   N   Y T I      G+IE+A  
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+  ME+ G++P   T+   I+   K+    +++   E+M ++ ++P+  A N  +  L 
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLA 483

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E G  ++A  M     + G +P+ +TY+ ++  Y+K G++ E + L  EM      P + 
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVI 543

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
              SLI SL + G+++EA + F  MK   L P V  Y +L+    ++G   KA+ L E M
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESM 603

Query: 365 VSEGLKPST 373
           + +   P+T
Sbjct: 604 IXKKCSPNT 612



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 167/364 (45%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V   + + GF L+  S+N LIH++ +S        +Y+ M+     P+  T   L+ AL 
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALG 238

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K    +  + +L  +      P V   T  I  + +  +I+E   + +RM  +    D +
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y++++ A      LE+A  ++ +M   G   +  +Y T +  + ++G ++       +M
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E  G  P   TF +L++   KA+  +E+ +  + M  + +LP+   +N +I  L   G  
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           + A  +L      G  P   TY   I  + K GE  + ++ + +M+ K I P + A  + 
Sbjct: 419 EDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + SL + G+L EA   F  ++ + L P    Y  ++  + + G   +A++L  EM+  G 
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538

Query: 370 KPST 373
           +P  
Sbjct: 539 EPDV 542



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 154/345 (44%), Gaps = 1/345 (0%)

Query: 29   LIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
            L+ V+ K  R    ++I+    + +   P  A+   LI  L +    +   D+   +   
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 88   RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
             C+P       L+    +  +I E   L K M+ +    D I Y++++ +  K  NL+ A
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 148  LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
            L  + +++   F      Y   I    + G++EEA  L +EM + G KP    FN+LI G
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937

Query: 208  CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
              K    E +    ++M++  + P   ++  ++  LC  G   +A          G  P+
Sbjct: 938  YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997

Query: 268  EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
             I Y+ +I G  K   ++E L LY EM  + I P L  Y SL+ +L   G +E+A + ++
Sbjct: 998  FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057

Query: 328  IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++   L P V  Y +L+  +    N   A  + + M+ +G  P+
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 175/398 (43%), Gaps = 35/398 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G+   +++F  L+ V+ K+   D  +  +  M +    PN  T  TLI  L + G+
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +LD +      P      + I    +     + +   ++M  K ++ + +A + 
Sbjct: 418 IEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +Y+  +M  L  A  ++  + + G + +S  Y   +  Y + G+++EA  L+ EM   G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P     N LI+   KA R++E+    ++M   KL P+   +N ++  L + G  ++A 
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    + K  SPN I+++ L+  + K  E++  LK++ +M      P +  Y ++I  L
Sbjct: 598 ELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657

Query: 314 CQCGKLEEADKYFKIMKSH---------SLVPGV-------------------------- 338
            +  K+  A  +F  +K           +L+PG+                          
Sbjct: 658 IKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
             +E L+G  L +    KA+   EE+V  G+    S+L
Sbjct: 718 SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFL 755



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 140/305 (45%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E A+D+ + ++  G +    +FN L+ V  KS +   ++ +Y+ M+     P+  T   +
Sbjct: 805  EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            IS+L K   L   +D    +      P       LI  + +  R+EE M L + M     
Sbjct: 865  ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +   +++++    K+ + E+A  +++ M+  G   +   YT  +   C  G+++EA  
Sbjct: 925  KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               E+++ GL P    +N +I G  K++R+EE+L+   +M +R ++P    +N ++  L 
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              G  +QA  M       G  P+  TY+ LI GY+     +    +Y  M     +P + 
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104

Query: 305  AYTSL 309
             Y  L
Sbjct: 1105 TYAQL 1109



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 130/321 (40%), Gaps = 39/321 (12%)

Query: 91  PMVIVNT---SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN-LES 146
           P V+  T   + +L  ++     E M  +   ++K +I   +   L ++  + +R  L  
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
              V  +M K GF  N++ Y   I    + G   EA  + + M + GLKP  +T++ L+ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              K +  E  +   ++M    L P+   F   IR L   G   +A  +     D+G  P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYY---------------------------------- 292
           + +TY+ LI      G+++   +L+                                   
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 293 -EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +ME     P +  +T L+  LC+    +EA   F +M+   ++P +  Y +L+   L  
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
           G    AL L + M S G++P+
Sbjct: 416 GRIEDALKLLDTMESVGVQPT 436


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 11/359 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ ++ +I  + K  R+     ++  M +   +PN  T   +I   C  G+      +L
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ SP V+   +LI   ++E +  E   L   ML + +I +TI Y+ ++    K 
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++  M  +G S + F +TT I  YC   +I++   L+ EM   GL     T+
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML----- 256
           N LI G      +  +L   +QM+S  + P     N ++  LC+ G  K A  M      
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 257 -TLALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             + LD      G  P+ +TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             LC+  +L+EA + F  M S S  P V  + +L+  + + G     L L  EM   G+
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 171/360 (47%), Gaps = 11/360 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S +++++N LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              DM   +  K CSP V   T+LI      +RI++GM LL  M R+ ++ +T+ Y+ ++
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + ++M+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P   T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI    + G +  A   F+ M S  + P      +++     K    +A+ + E++
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 11/371 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   +++++N +I     S R     R+ Q MLE    PN  T   LI+A  K G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                ++ D +  +   P  I   S+I    +++R++    +   M  K    D   ++ 
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++      + ++  + +  EM +RG  AN+  Y T I  +C  G +  A  L Q+M ++G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL-----------PSCSAFNEMIRR 242
           + P   T N L++G     +++++L   + M   K+            P    +N +I  
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L   G   +A  +      +G  P+ ITYS +I G  K+  + E  +++  M  KS SP 
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  + +LI+  C+ G++++  + F  M    +V    IY +L+    + GN   AL + +
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 638

Query: 363 EMVSEGLKPST 373
           EM+S G+ P T
Sbjct: 639 EMISSGVYPDT 649



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 5/353 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+I FN L+  V + +R DLV  +YQ M       +  +   LI   C   +L   +   
Sbjct: 80  SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P V+  T+L+  +  + R+ E + L  ++ R     D + ++ ++    + 
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRP----DVLTFTTLMNGLCRE 195

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN-AGLKPYDET 200
             +  A+ + + M++ G   +   Y TF+   C+ G    A  L+++ME  + +KP    
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVI 255

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I+G  K  R  +S +   +M  + + P+   +N MI   C  G    A  +L   L
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  SPN +TY+ LI  + KEG+  E  +LY EM  + I P    Y S+I   C+  +L+
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            A+  F +M +    P V  + +L+  +         + L  EM   GL  +T
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E+ + L   MLR   +   I ++ ++ A V+M   +  + +Y++M ++    + + +T 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C   K+  A     ++   GL P   TF  L+ G     R+ E+L    Q+    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P    F  ++  LC  G   +A  +L   ++ G  P++ITY   + G  K G+    L
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 289 KLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            L  +ME  S I P +  Y+++I  LC+ G+  ++   F  M+   + P +  Y  ++G 
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
               G  + A  L +EM+   + P+ 
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNV 323



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 11/303 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A D+   +  +G S  + +F TLI     + R D    +   M       N  T  T
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C  G L   +D+  ++      P ++   +L+  +    ++++ + + K M +  
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 124 MI-----------HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           M             D + Y++++   +       A  +YEEM  RG   ++  Y++ I  
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+  +++EA  +   M +    P   TFN LI G  KA R+++ L    +M  R ++  
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I    + GN   A  +    +  G  P+ IT  +++ G+  + E++  + +  
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673

Query: 293 EME 295
           +++
Sbjct: 674 DLQ 676



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 39/196 (19%)

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE------------------------- 238
           L  G  + K +E+++     M+  + LPS   FN+                         
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 239 ----------MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
                     +I+  C C     A          G  P+ +T++ L+ G   +  + E L
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            L++++      P +  +T+L++ LC+ G++ EA      M  + L P    Y + V   
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 349 LEKGNKAKALHLCEEM 364
            + G+   AL+L  +M
Sbjct: 228 CKMGDTVSALNLLRKM 243


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 174/362 (48%), Gaps = 3/362 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   S++S+N +I    +    D    ++  MLE    PN  T   L+    K G  +
Sbjct: 461 RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTE 520

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + DR+ G+  +P       +I  + +  R  E    LK+++++  I   + Y+ I+
Sbjct: 521 YAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCII 580

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              VK  ++ SAL VY EM K G S N F YT  I  +C+   ++ A  +M EM+N G++
Sbjct: 581 DGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIE 640

Query: 196 PYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                +  LI+G C K   +  S     ++    L P+   ++ MI    +  N + A  
Sbjct: 641 LDVTVYCALIDGFCRKGDMVNAS-QLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALH 699

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +    +++G   +   Y+ LI G  KEG++    +LY EM  K I P L  Y+ LI  LC
Sbjct: 700 LHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLC 759

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP-ST 373
             G+LE A K  + M    + P V IY +L+  H ++GN  +A  L  EM+ +GL P  T
Sbjct: 760 NKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDT 819

Query: 374 SY 375
           +Y
Sbjct: 820 TY 821



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 1/355 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++++   TL+    K    D    ++  M EN   PN  T   +I   CK G +   
Sbjct: 324 GKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKA 383

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++ +++  K  SP V    SLI   ++    EE   L    +    I +   Y+ ++  
Sbjct: 384 YEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTYNSLLSW 442

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +  A  ++E+M+++G   +   Y   I  +C+ G ++ AN +  EM   GLKP 
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++L++G  K    E +    ++M    + PS    N +I  LC+ G   ++   L 
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLK 562

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +GF P  +TY+ +I G+ KEG +   L +Y EM    +SP +  YT+LI+  C+  
Sbjct: 563 KLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++ A K    MK+  +   V +Y +L+     KG+   A  L  E+   GL P+
Sbjct: 623 NMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPN 677



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 163/339 (48%), Gaps = 2/339 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATIRTLISALCKGGQL 74
           ++G   +LI+++ L+    K    +  + +Y  M  ENI  P++ T   +I+ LCK G+ 
Sbjct: 496 EKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIA-PSDFTCNIIINGLCKAGRT 554

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
               D L ++  +   P  +    +I   ++E  +   + +   M +  +  +   Y+ +
Sbjct: 555 SESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNL 614

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K  N++ AL V +EM  +G   +  VY   I  +C  G +  A+ L+ E++  GL
Sbjct: 615 INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P    ++ +I G  K + +E +L   ++M++  +      +  +I  L + G    A+ 
Sbjct: 675 SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASE 734

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +    L KG  P+ ITYS LI G   +G+++   K+  +M+ K ++PT+  Y +LI+   
Sbjct: 735 LYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHF 794

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           + G L+EA +    M    LVP    Y+ LV   ++ GN
Sbjct: 795 KEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 161/363 (44%), Gaps = 36/363 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   ++ +  S ++ + N+LI    K+   +   +++   +      N  T  +L+S
Sbjct: 383 AYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVA-CGIANVFTYNSLLS 441

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G++                                    E   + ++M+RK +  
Sbjct: 442 WLCKEGKMS-----------------------------------EACSIWEKMVRKGVRP 466

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             ++Y+ ++    +  +++SA  V+ EML++G   N   Y+  +  Y + G  E A  L 
Sbjct: 467 SVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLY 526

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M    + P D T N++I G  KA R  ES    ++++    +P+C  +N +I    + 
Sbjct: 527 DRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE 586

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+   A  + T     G SPN  TY++LI G+ K   +   LK+  EM+ K I   +  Y
Sbjct: 587 GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVY 646

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LI   C+ G +  A +    ++   L P   +Y S++    +  N   ALHL + M++
Sbjct: 647 CALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMIN 706

Query: 367 EGL 369
           EG+
Sbjct: 707 EGI 709



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 169/383 (44%), Gaps = 38/383 (9%)

Query: 26  FNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           FN L++   K+ R ND V   +  ++E    P    +   +S L K   ++   D+ +++
Sbjct: 157 FNYLLNSYVKTKRINDAV-DCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K         + +I   ++E ++EE     +    K +  D  AYS+++ A  K  + 
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIG--------------------------------- 171
            +AL +  EM  +G+  +  ++T  IG                                 
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335

Query: 172 --AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
              YC+ G ++ A  L  +M   G+ P + T+ ++IE C K   ++++     QM ++ +
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDI 395

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P+    N +IR   +  + ++A+ +   A+  G + N  TY+ L+    KEG++ E   
Sbjct: 396 SPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACS 454

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           ++ +M  K + P++ +Y ++I   CQ G ++ A+  F  M    L P +  Y  L+  + 
Sbjct: 455 IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYF 514

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           +KG+   A  L + M  E + PS
Sbjct: 515 KKGDTEYAFGLYDRMRGENIAPS 537



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 129/276 (46%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  + L Q GF  + +++N +I    K    +    +Y  M +    PN  T   LI+  
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK   +   + ++D +  K     V V  +LI    ++  +     LL  +    +  + 
Sbjct: 619 CKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNK 678

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + YS ++    K++N+E+AL +++ M+  G   +  +YTT I    + GK+  A+ L  E
Sbjct: 679 VVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAE 738

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G+ P   T+++LI G     ++E +    E M  + + P+   +N +I    + GN
Sbjct: 739 MLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGN 798

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
            ++A  +    LDKG  P++ TY  L+ G  K+G +
Sbjct: 799 LQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 123/272 (45%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           ++ +RI + +     ++ K+++      ++ +   VK   +  A  VY +M  +G   + 
Sbjct: 165 VKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDC 224

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
              +  I A    GK+EEA    +E +N G++     ++++IE   K      +L    +
Sbjct: 225 ATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLRE 284

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M  +  +P    F  +I    + G   +A  +    L  G   N +  + L+ GY K+G+
Sbjct: 285 MRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGD 344

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           +   L+L+ +M    I P    Y  +I   C+ G +++A + +  MK+  + P V    S
Sbjct: 345 LDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNS 404

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           L+  +L+  +  +A  L +E V+ G+    +Y
Sbjct: 405 LIRGYLKARSPEEASKLFDEAVACGIANVFTY 436



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/294 (20%), Positives = 136/294 (46%), Gaps = 15/294 (5%)

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           ++L+R       P   V + ++ R+I+  R            R +   D+  ++ ++ + 
Sbjct: 120 NLLNRFASDDWGP---VPSVVVARLIESSR------------RLDFESDSRVFNYLLNSY 164

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           VK + +  A+  +  ++++       V   F+    +   I EA  +  +M + G+K   
Sbjct: 165 VKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDC 224

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T +++I    +  ++EE+  +  +  ++ +     A++ +I  +C+  ++  A G+L  
Sbjct: 225 ATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLRE 284

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
             DKG+ P+E+ ++ +IG   K+G++ E +K+  EM        +   T+L+   C+ G 
Sbjct: 285 MRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGD 344

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+ A + F  M  + + P    Y  ++    + GN  KA  +  +M ++ + P+
Sbjct: 345 LDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPT 398



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 63/143 (44%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + + +   G    L  + TLI  + K  +      +Y  ML     P+  T   L
Sbjct: 695 EAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVL 754

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  GQL+    +L+ +  K  +P V +  +LI    +E  ++E   L   ML K +
Sbjct: 755 IHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGL 814

Query: 125 IHDTIAYSLIVYAKVKMRNLESA 147
           + D   Y ++V  KVK  NL S 
Sbjct: 815 VPDDTTYDILVNGKVKDGNLFSG 837


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 11/359 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ ++ +I  + K  R+     ++  M +   +PN  T   +I   C  G+      +L
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ SP V+   +LI   ++E +  E   L   ML + +I +TI Y+ ++    K 
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++  M  +G S + F +TT I  YC   +I++   L+ EM   GL     T+
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML----- 256
           N LI G      +  +L   +QM+S  + P     N ++  LC+ G  K A  M      
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 257 -TLALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             + LD      G  P+ +TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             LC+  +L+EA + F  M S S  P V  + +L+  + + G     L L  EM   G+
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 171/360 (47%), Gaps = 11/360 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S +++++N LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              DM   +  K CSP V   T+LI      +RI++GM LL  M R+ ++ +T+ Y+ ++
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + ++M+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P   T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI    + G +  A   F+ M S  + P      +++     K    +A+ + E++
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 11/371 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   +++++N +I     S R     R+ Q MLE    PN  T   LI+A  K G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                ++ D +  +   P  I   S+I    +++R++    +   M  K    D   ++ 
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++      + ++  + +  EM +RG  AN+  Y T I  +C  G +  A  L Q+M ++G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL-----------PSCSAFNEMIRR 242
           + P   T N L++G     +++++L   + M   K+            P    +N +I  
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L   G   +A  +      +G  P+ ITYS +I G  K+  + E  +++  M  KS SP 
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  + +LI+  C+ G++++  + F  M    +V    IY +L+    + GN   AL + +
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 638

Query: 363 EMVSEGLKPST 373
           EM+S G+ P T
Sbjct: 639 EMISSGVYPDT 649



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 5/353 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+I FN L+  V + +R DLV  +YQ M       +  +   LI   C   +L   +   
Sbjct: 80  SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P V+  T+L+  +  + R+ E + L  ++ R     D + ++ ++    + 
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRP----DVLTFTTLMNGLCRE 195

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN-AGLKPYDET 200
             +  A+ + + M++ G   +   Y TF+   C+ G    A  L+++ME  + +KP    
Sbjct: 196 GRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVI 255

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I+G  K  R  +S +   +M  + + P+   +N MI   C  G    A  +L   L
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEML 315

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  SPN +TY+ LI  + KEG+  E  +LY EM  + I P    Y S+I   C+  +L+
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 375

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            A+  F +M +    P V  + +L+  +         + L  EM   GL  +T
Sbjct: 376 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E+ + L   MLR   +   I ++ ++ A V+M   +  + +Y++M ++    + + +T 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C   K+  A     ++   GL P   TF  L+ G     R+ E+L    Q+    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P    F  ++  LC  G   +A  +L   ++ G  P++ITY   + G  K G+    L
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 289 KLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            L  +ME  S I P +  Y+++I  LC+ G+  ++   F  M+   + P +  Y  ++G 
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
               G  + A  L +EM+   + P+ 
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNV 323



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 11/303 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A D+   +  +G S  + +F TLI     + R D    +   M       N  T  T
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C  G L   +D+  ++      P ++   +L+  +    ++++ + + K M +  
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 124 MI-----------HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           M             D + Y++++   +       A  +YEEM  RG   ++  Y++ I  
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+  +++EA  +   M +    P   TFN LI G  KA R+++ L    +M  R ++  
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I    + GN   A  +    +  G  P+ IT  +++ G+  + E++  + +  
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673

Query: 293 EME 295
           +++
Sbjct: 674 DLQ 676



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 39/196 (19%)

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE------------------------- 238
           L  G  + K +E+++     M+  + LPS   FN+                         
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 239 ----------MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
                     +I+  C C     A          G  P+ +T++ L+ G   +  + E L
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            L++++      P +  +T+L++ LC+ G++ EA      M  + L P    Y + V   
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 349 LEKGNKAKALHLCEEM 364
            + G+   AL+L  +M
Sbjct: 228 CKMGDTVSALNLLRKM 243


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 182/361 (50%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F +  D C+ LE  G + ++ + N +I+   +  +    + +   +++    P+  T  T
Sbjct: 104 FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 163

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L   G++   V ++DR+    C P V+   S++  I +       + LL++M  +N
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS I+ +  +   +++A+ +++EM  +G  ++   Y + +   C+ GK  +  
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M +  + P   TFN+L++   K  +++E+    ++M++R + P+   +N ++   
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +AN ML L +    SP+ +T++ LI GY     + + +K++  +  + +    
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ L+   CQ GK++ A++ F+ M SH ++P V  Y  L+    + G   KAL + E+
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463

Query: 364 M 364
           +
Sbjct: 464 L 464



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 177/357 (49%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G    ++++N++++ + +S    L   + + M E     +  T  T+I +LC+ G + 
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +   +  K     V+   SL+  + +  +  +G +LLK M+ + ++ + I +++++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              VK   L+ A  +Y+EM+ RG S N   Y T +  YC   ++ EAN ++  M      
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TF  LI+G    KR+++ +     +  R L+ +   ++ +++  C+ G  K A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  P+ +TY  L+ G    G++++ L+++ +++   +   +  YT++I  +C+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK+E+A   F  +    + P V  Y  ++    +KG+ ++A  L  +M  +G  P+
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 164/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SL+ F+     + ++ + +LV    + +  N    N  T+  +I+  C+  +      +L
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P      +LI  +  E ++ E +VL+ RM+      D + Y+ IV    + 
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +   AL +  +M +R   A+ F Y+T I + C  G I+ A  L +EME  G+K    T+
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L+ G  KA +  +     + M+SR+++P+   FN ++    + G  ++AN +    + 
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G SPN ITY+ L+ GY  +  + E   +   M     SP +  +TSLI   C   ++++
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             K F+ +    LV     Y  LV    + G    A  L +EMVS G+ P 
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 158/328 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  + + +E +G   S++++N+L+  + K+ + +    + + M+     PN  T   
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+    K G+LQ   ++   +  +  SP +I   +L+     + R+ E   +L  M+R  
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + ++ ++     ++ ++  + V+  + KRG  AN+  Y+  +  +C+ GKI+ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L QEM + G+ P   T+ +L++G     ++E++L   E +   K+      +  +I  +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  + A  +      KG  PN +TY+ +I G  K+G + E   L  +ME    +P  
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKS 331
             Y +LI +  + G L  + K  + MKS
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKS 571



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 125/269 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           I + + ++ + L + M+R   +   + +S    A  + +     L   +++   G + N 
Sbjct: 64  IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           +     I  +C   K   A  ++ ++   G +P   TFN LI+G     ++ E++   ++
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P    +N ++  +C  G+   A  +L    ++    +  TYS +I    ++G 
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           I   + L+ EME K I  ++  Y SL+  LC+ GK  +     K M S  +VP V  +  
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+ + +++G   +A  L +EM++ G+ P+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPN 332



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 46/273 (16%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R + +RG   + ++++ L+    +S +  L   ++Q M+ +   P+  T   L+  LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G+L+  ++                    I   +Q+ +++ G+V+              
Sbjct: 450 DNGKLEKALE--------------------IFEDLQKSKMDLGIVM-------------- 475

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ I+    K   +E A  ++  +  +G   N   YT  I   C+ G + EAN L+++M
Sbjct: 476 -YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534

Query: 190 ENAGLKPYDETFNLLIEG-------CAKAKRIEE--SLSYCEQMMSRKLLPS--CSAFNE 238
           E  G  P D T+N LI          A AK IEE  S  +     S K++     SA   
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           +  R C    +K    +L L+  +    + +T+
Sbjct: 595 LTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTF 627


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 166/349 (47%), Gaps = 1/349 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+A DV    ++ GF  ++ +++ ++    +S R     +++Q M +    PN  T  T+
Sbjct: 216 EIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTI 275

Query: 65  ISALCKGG-QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           I A  KGG  L+  +D+ + +  +   P  I   SLI    +    E+   +   M R+ 
Sbjct: 276 IDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRG 335

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   Y+ ++ A  K   +E A  +   M  +  S N   Y+T I  Y + G  EEA 
Sbjct: 336 IEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAI 395

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M+ +G++P   ++N LI+  AK  R +++L+ C+ M    L      +N +I   
Sbjct: 396 GLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAY 455

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  K A G+      +G  PN +TYS LI  Y+K G  Q+   ++ E +   + P +
Sbjct: 456 GKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDV 515

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
             Y+SLI S C+CG +E+A    + M    + P +  Y SL+  +   G
Sbjct: 516 VLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNG 564



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 7/302 (2%)

Query: 74  LQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           LQ Y  M+ + H +   S +  +  S + R+    ++E  + +  R  +    ++  AYS
Sbjct: 182 LQGYEWMVQQGHLRSEWSKLASIMISTLGRL---GKVEIALDVFNRAQKAGFGNNVYAYS 238

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE--EANCLMQEME 190
            +V A  +      AL V++ M K G   N   Y T I A C  G ++  +A  + +EM+
Sbjct: 239 AMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDA-CGKGGVDLKKALDIFEEMQ 297

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G++P   TFN LI  C++    E+S     +M  R +      +N +I  +C+ G  +
Sbjct: 298 KEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQME 357

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +++    K  SPN +TYS +I GY K G  +E + LY++M+   + P   +Y +LI
Sbjct: 358 LAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLI 417

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
               + G+ ++A    K M+   L   V  Y +L+  + ++G    A  L ++M +EGL 
Sbjct: 418 DIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLV 477

Query: 371 PS 372
           P+
Sbjct: 478 PN 479



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 156/331 (47%), Gaps = 6/331 (1%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           W + Q  L +  +   A+I  +IS L + G+++  +D+ +R         V   ++++  
Sbjct: 187 WMVQQGHLRS-EWSKLASI--MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSA 243

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR-NLESALVVYEEMLKRGFSA 161
             +  R  E + + + M +     + I Y+ I+ A  K   +L+ AL ++EEM K G   
Sbjct: 244 YGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEP 303

Query: 162 NSFVYTTFIGAYCEYGKI-EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
           +   + + I A C  G + E++  +  EM+  G++    T+N LI+   K  ++E + S 
Sbjct: 304 DRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASI 362

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
              M  + + P+   ++ MI    + G  ++A G+     + G  P+ ++Y+ LI  YAK
Sbjct: 363 MSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAK 422

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G   + L    +ME   +   +  Y +LI +  + GK ++A   F  MK+  LVP V  
Sbjct: 423 LGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLT 482

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           Y +L+  + + G    A  +  E    GLKP
Sbjct: 483 YSALIDAYSKAGMHQDATSIFVEFKRAGLKP 513



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 151/336 (44%), Gaps = 9/336 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATI 61
           L+E +  V   +++RG    + ++NTLI  V K  + +L   I   M L+NI  PN  T 
Sbjct: 320 LWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNIS-PNVVTY 378

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I    K G  +  + +   +      P  +   +LI    +  R ++ +   K M R
Sbjct: 379 STMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMER 438

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  D + Y+ ++ A  K    + A  ++++M   G   N   Y+  I AY + G  ++
Sbjct: 439 VGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQD 498

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  E + AGLKP    ++ LI+ C K   +E+++   ++M    + P+   +N +I 
Sbjct: 499 ATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLID 558

Query: 242 ---RLCECGNAKQANGMLTLAL--DKGFSPNEITYSHLIGGYAKEGE--IQEVLKLYYEM 294
              R  +  N + A G + + +    G    EI    L           +   + +++EM
Sbjct: 559 AYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEM 618

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           +   + P +  +++++++  +C  L+EA    + M+
Sbjct: 619 QQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMR 654



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/367 (20%), Positives = 145/367 (39%), Gaps = 77/367 (20%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +++ G     I+FN+LI V ++    +   R++  M       +  T  TLI 
Sbjct: 289 ALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLID 348

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI-----LRIIQEE-------------- 107
           A+CKGGQ++    ++  +  K  SP V+  +++I     L   +E               
Sbjct: 349 AVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRP 408

Query: 108 ----------------RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                           R ++ +   K M R  +  D + Y+ ++ A  K    + A  ++
Sbjct: 409 DRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLF 468

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           ++M   G   N   Y+  I AY + G  ++A  +  E + AGLKP    ++ LI+ C K 
Sbjct: 469 DKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKC 528

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIR---RLCECGNAKQANGMLTLAL-----DK- 262
             +E+++   ++M    + P+   +N +I    R  +  N + A G + + +     D+ 
Sbjct: 529 GLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRS 588

Query: 263 ---------------------------------GFSPNEITYSHLIGGYAKEGEIQEVLK 289
                                            G  PN +T+S ++   ++   +QE   
Sbjct: 589 TEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASV 648

Query: 290 LYYEMEY 296
           L  +M +
Sbjct: 649 LLEQMRF 655


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 185/392 (47%), Gaps = 22/392 (5%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M LFE        L +RG    ++++NTLI  + K+   +   R++  M      PN  T
Sbjct: 101 MELFE-------ELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVT 153

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCS--PMVIVNTSLILRIIQEERIEEGMVLLKR 118
              LI+ LCK G++    +++  +  K C   P +I   S +  + ++    E   L+ R
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-R 212

Query: 119 MLRKNMIH---DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            LR   +    DT+ +S ++    K    + A    ++M+  G+  N   Y   +   C+
Sbjct: 213 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCK 270

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K+E A+ +++ M + G+ P   T+++L++   KA R++E+L     M SR   P+   
Sbjct: 271 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN +I  LC+   + +A  +     ++   P+++T++ LI G  K G  ++   L+ EM 
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K++ P +  + +LI  LC+ G++E A     +M +  + P V  Y  LV    + G   
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450

Query: 356 KALHLCEEMVSEGLKP-STSY------LCSAS 380
           +     EEMVS G  P S +Y      LC AS
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRAS 482



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 155/318 (48%), Gaps = 2/318 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T  TLI  LCK GQ     +  D I G    P V+   +L+  + + +++E    +
Sbjct: 223 PDTVTFSTLIDGLCKCGQTDEACND-DMIAGGYV-PNVVTYNALVNGLCKADKMERAHAM 280

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           ++ M+ K +  D I YS++V A  K   ++ AL +   M  RG + N   + + I   C+
Sbjct: 281 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 340

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             +  EA  +  ++ N  L P   TFN+LI G  KA   E++ +  E+M+++ + P    
Sbjct: 341 SDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMT 400

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           F  +I  LC+ G  + A  +L L  + G  PN +TY+ L+ G  K G I+E  +   EM 
Sbjct: 401 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMV 460

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
                P    Y SL+ +LC+  + ++A +    +KS    P    Y  LV    + G   
Sbjct: 461 SSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTE 520

Query: 356 KALHLCEEMVSEGLKPST 373
           +A+ + EEMV +G +P +
Sbjct: 521 QAITVLEEMVGKGHQPDS 538



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/328 (21%), Positives = 161/328 (49%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  +++++N L++ + K+D+ +    + + M++    P+  T   L+ A CK  ++   
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L  +  + C+P V+   S+I  + + +R  E   +  ++  + ++ D + +++++  
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAG 372

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  N E A  ++EEM+ +    +   +   I   C+ G++E A  ++  M N G+ P 
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 432

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N+L+ G  K+ RIEE   + E+M+S   +P    +  ++  LC       A  +++
Sbjct: 433 VVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVS 492

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G+ P+ +TY+ L+ G  K G+ ++ + +  EM  K   P    + +    L + G
Sbjct: 493 KLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSG 552

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLV 345
            L    +  +++ +  ++P      S++
Sbjct: 553 NLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 11/263 (4%)

Query: 119 MLRKNMIHDTIAYSLIVYAKV-----KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           + R  M  D +A +++ Y  +     K   L + + ++EE++KRG   +   Y T I + 
Sbjct: 67  IFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSL 126

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR--KLLP 231
           C+ G +EEA  L   M + G  P   T+++LI G  K  RI+E+    ++M  +   +LP
Sbjct: 127 CKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 186

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGF--SPNEITYSHLIGGYAKEGEIQEVLK 289
           +   +N  +  LC+     +A  ++    D     SP+ +T+S LI G  K G+  E   
Sbjct: 187 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN 246

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
              +M      P +  Y +L++ LC+  K+E A    + M    + P V  Y  LV    
Sbjct: 247 --DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 304

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           +     +AL L   M S G  P+
Sbjct: 305 KASRVDEALELLHGMASRGCTPN 327



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 129/269 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +  RG + ++++FN++I  + KSDR+   ++I   +   +  P++ T   LI+
Sbjct: 312 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIA 371

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G  +    + + +  K   P V+   +LI  + +  ++E    +L  M    +  
Sbjct: 372 GACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 431

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+++V+   K   +E      EEM+  G    S  Y + + A C   + ++A  L+
Sbjct: 432 NVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLV 491

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            ++++ G  P   T+N+L++G  K+ + E++++  E+M+ +   P    F      L   
Sbjct: 492 SKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRS 551

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLI 275
           GN      +L + L KG  P+  T S ++
Sbjct: 552 GNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 117/292 (40%), Gaps = 45/292 (15%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESA-LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           N  H T A +L+V       N +   L   +    R  S +   Y   + + C  G+   
Sbjct: 4   NPHHHTAAANLLVPITTATINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETAR 63

Query: 182 A-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           A      EM   G+ P   T+N +I G  K+  +   +   E+++ R   P    +N +I
Sbjct: 64  ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLI 123

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-- 298
             LC+ G+ ++A  +      +G  PN +TYS LI G  K G I E  +L  EM  KS  
Sbjct: 124 DSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 183

Query: 299 -------------------------------------ISPTLPAYTSLISSLCQCGKLEE 321
                                                +SP    +++LI  LC+CG+ +E
Sbjct: 184 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 243

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH-LCEEMVSEGLKPS 372
           A      M +   VP V  Y +LV   L K +K +  H + E MV +G+ P 
Sbjct: 244 ACN--DDMIAGGYVPNVVTYNALVN-GLCKADKMERAHAMIESMVDKGVTPD 292



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 89/203 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  +   +  +     +++F  LI  + K+ + +    I   M      PN  T   
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LCK G+++   + L+ +    C P  +   SL+  + +  R ++ + L+ ++    
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              DT+ Y+++V    K    E A+ V EEM+ +G   +SF +    G     G +    
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTM 558

Query: 184 CLMQEMENAGLKPYDETFNLLIE 206
            L++ +   G+ P   T + +++
Sbjct: 559 ELLRVVLAKGMLPDATTCSSILD 581


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 168/356 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF+ SLI++ T+I  + K        ++ + M E    P+     T+I +LCK  +    
Sbjct: 171 GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEA 230

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +     +  +   P V+  +S++       ++ E   L K+M+ +N++ +T+ ++++V  
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +  A  V+E M + G   +++ Y+  +  YC   +++EA  L   M   G  P 
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N+LI G  K++R+ E+ +   +M  R L P    ++ +++  C+ G  + A  +  
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  P+ ITYS L+ G  K G + E  +L   M+   I P +  Y  LI  +C  G
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           KLE A + F  +    + P V  Y  ++   L++G   +A  +  +MV  G  P++
Sbjct: 471 KLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNS 526



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 169/370 (45%), Gaps = 2/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDL--VWRIYQHMLENIRYPNEATI 61
           +     +C+ ++      ++ +   LI+ +  S+R+ +   +     M +    P   T 
Sbjct: 85  YSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTF 144

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL++ LC   ++   V + D I     +P +I  T++I  + +       + LLK+M  
Sbjct: 145 GTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEE 204

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K    D +AY+ ++ +  K R    A+  + EM+ +G   N   Y++ +  +C  G++ E
Sbjct: 205 KGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNE 264

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L ++M    + P   TF +L++G  K   I E+    E M    + P    ++ ++ 
Sbjct: 265 ATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMD 324

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C      +A  +  + + KGF+P+   Y+ LI G+ K   + E   L  EM  + ++P
Sbjct: 325 GYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTP 384

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y++L+   CQ G+ + A K FK M S+ L+P    Y  L+    + G+  +A  L 
Sbjct: 385 DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLL 444

Query: 362 EEMVSEGLKP 371
           + M    ++P
Sbjct: 445 KAMQESKIEP 454



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 162/354 (45%), Gaps = 4/354 (1%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYV--D 79
           ++ FN L+  + K      V  + + M L NIR PN  T+  LI+ LC   +   +    
Sbjct: 69  VVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIR-PNVYTLTILINCLCHSNRDHVHFAFS 127

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
            L ++      P  +   +L+  +  + +I + + L   + +       I Y+ I+    
Sbjct: 128 ALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLC 187

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K+ +  +AL + ++M ++G   +   Y T I + C+  +  EA     EM + G+ P   
Sbjct: 188 KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVV 247

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T++ ++ G     ++ E+ S  +QM+ R ++P+   F  ++  LC+ G   +A  +  + 
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
            + G  P+  TYS L+ GY  + ++ E  KL+  M  K  +P++  Y  LI+  C+  +L
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            EA      M    L P    Y +L+    + G    A  L +EM S GL P +
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDS 421



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/403 (20%), Positives = 157/403 (38%), Gaps = 70/403 (17%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + +E++G    ++++NT+I  + K  R +     +  M++    PN  T  +++ 
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQE-------------------- 106
             C  GQL     +  ++ G+   P  +  T L+  + +E                    
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314

Query: 107 ---------------ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                           +++E   L   M+ K        Y++++    K R L  A  + 
Sbjct: 315 DAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLL 374

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM  R  + ++  Y+T +  +C+ G+ + A  L +EM + GL P   T+++L++G  K 
Sbjct: 375 SEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKH 434

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             ++E+    + M   K+ P    +N +I+ +C  G  + A  + +    KG  P+ +TY
Sbjct: 435 GHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTY 494

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I G  KEG   E  +++ +M      P    Y   I                     
Sbjct: 495 TVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF------------------ 536

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
                            L  G+ + A+ L EEMV  G    +S
Sbjct: 537 -----------------LRNGDPSNAVRLIEEMVGRGFSADSS 562



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 131/287 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++F  L+  + K        R+++ M EN   P+  T   L+   C   Q+     + D 
Sbjct: 282 VTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDI 341

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + GK  +P V V   LI    +  R+ E   LL  M  +++  DT+ YS ++    +   
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            + A  +++EM   G   +S  Y+  +   C++G ++EA  L++ M+ + ++P+   +N+
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G     ++E +      +  + + PS   +  MI  L + G + +A  M    +  G
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             PN  TY+  I G+ + G+    ++L  EM  +  S     +  L+
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 4/184 (2%)

Query: 193 GLKPYDET--FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG--N 248
           G++P      FN L+    K K     +S C+QM    + P+      +I  LC     +
Sbjct: 62  GIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDH 121

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A   L      G  P  +T+  L+ G   + +I + +KL+ E+     +P+L  YT+
Sbjct: 122 VHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTT 181

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I  LC+ G    A +  K M+     P V  Y +++    +     +A++   EMV +G
Sbjct: 182 IIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG 241

Query: 369 LKPS 372
           + P+
Sbjct: 242 IPPN 245


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 172/357 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S ++ ++N+ I+ + K  R     +    ML N   P+  +  TLI   C+ G L  
Sbjct: 333 KGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMK 392

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + D +      P ++   +L+  + ++  +E    L   M+ + +  D + Y+++V 
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              KM +L  A   ++EML  G   +S+ Y T I    + G    A  L +EM   G  P
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +N++++G  K   +EE+    ++M+S  ++P    +  +I    E G  ++   + 
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L KG +P+ +TY+ LI G+A +G ++     + EM+ K I P +  Y SLI+ LC+ 
Sbjct: 573 YEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKV 632

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++++A  +F  M    + P    Y  L+  +   GN  +AL L ++M+  G++P +
Sbjct: 633 RRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 168/381 (44%), Gaps = 35/381 (9%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N ++ ++   D       +Y+ M E    P   T  TL+ + CKGG++Q  +D+L  +  
Sbjct: 203 NRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQR 262

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           + C+P  +    LI  + ++   E+   L+  ML+  +      Y+ ++Y       L  
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL + EEM+ +G S     Y +FI   C+ G++ +A   + +M    L P   ++N LI 
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  +   + ++    +++ S  L P+   +N ++  LC  G  + A  +    +++G +P
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442

Query: 267 NEITYSHLIGG--------------------------YA---------KEGEIQEVLKLY 291
           + +TY+ L+ G                          YA         K G+      L 
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQ 502

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            EM  K   P L  Y  ++  LC+ G LEEA +  + M S  ++P    Y S++  HLE 
Sbjct: 503 EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLEN 562

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
           G   K   +  EM+S+GL PS
Sbjct: 563 GRLRKGREIFYEMLSKGLTPS 583



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 167/366 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
             D+   +++RG + + +++N LI+ ++K    +    +   ML+     +  T   LI 
Sbjct: 253 GLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIY 312

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L   + + + +  K  SP V    S I  + +  R+ + M  L  ML  N++ 
Sbjct: 313 GYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y+ ++Y   ++ NL  A ++++E+           Y T +   C  G++E A  L 
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM N G+ P   T+ +L+ G  K   +  +  + ++M+   L     A+   I    + 
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +    L KGF P+ I Y+ ++ G  K G ++E  +L  +M    + P    Y
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TS+I +  + G+L +  + F  M S  L P V  Y  L+  H  KG   +A     EM  
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 367 EGLKPS 372
           +G+ P+
Sbjct: 613 KGILPN 618



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 1/343 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++S+NTLI+   +       + ++  +     +P   T  TL+  LC+ G+L+    + 
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +  +P ++  T L+    +   +         ML + +  D+ AY+  +  ++K+
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +   A  + EEML +GF  +  +Y   +   C+ G +EEA+ L+Q+M + G+ P   T+
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I    +  R+ +      +M+S+ L PS   +  +I      G  ++A    +   +
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI G  K   + +    + EM  K I P   +YT LI+  C  G  +E
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A   +K M    + P    + +L+   L K  K +A+H    M
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLK-QLGKDCKLQAVHGTSTM 714



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 119/241 (49%)

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
            L+++   K   +E  L V+++M+K   S +       +    +   + +A  + + M  
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+KP   T+N L++   K  ++++ L    +M  R   P+   +N +I  L + G  +Q
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A G++   L  G   +  TY+ LI GY  +G + E L L  EM  K  SPT+  Y S I 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+ G++ +A +    M +++L+P V  Y +L+  +   GN  KA  L +E+ S  L P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 372 S 372
           +
Sbjct: 408 T 408



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 153/337 (45%), Gaps = 39/337 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++NTL+  + +    ++  ++   M+     P+  T   L++  CK G L    +  
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467

Query: 82  D----------------RIHG-------------------KRCSPMVIVNTSLILRIIQE 106
           D                RI G                   K   P +I+   ++  + + 
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
             +EE   LL++M+   +I D + Y+ I++A ++   L     ++ EML +G + +   Y
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTY 587

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           T  I  +   G++E A     EM+  G+ P   T+N LI G  K +R++++ ++  +M+ 
Sbjct: 588 TVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVE 647

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           + + P+  ++  +I   C  GN ++A  +    LD+G  P+  T+S L+    K+ ++Q 
Sbjct: 648 KGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQA 707

Query: 287 V--LKLYYEMEYKSISPTLPAYTSL--ISSLCQCGKL 319
           V         +   +S T+ A T+L  +SS+ + G +
Sbjct: 708 VHGTSTMPTAKVDLLSQTVGAATALTSVSSIAENGHI 744



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 20/234 (8%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC--------- 208
           GF  + FV+   +    +   +  A  +M+ + NA +       ++LI GC         
Sbjct: 110 GFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMH---RIVDVLIGGCVSSEVSVKI 166

Query: 209 --------AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
                   +K   +E+ LS  ++M+  +L P     N ++R L +     +A  +     
Sbjct: 167 LDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMG 226

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           + G  P  +TY+ L+  Y K G++Q+ L L  EM+ +  +P    Y  LI+ L + G+ E
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +A      M    L      Y  L+  +  KG  A+AL L EEMV +G  P+ +
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVA 340


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 176/363 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++  + L QRG   +   FN +I    +  +      ++  M +    P+  +   L+ 
Sbjct: 265 AWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVD 324

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G + T  D+L  +     +P ++  +SL+  + +  ++E    L +R+  +   H
Sbjct: 325 GLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKH 384

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS+I+    +  N+E    ++ +M+   F  +++ YT+ I A+C +  + +A  + 
Sbjct: 385 DHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVF 444

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M ++G+ P   T  +L++G  K + I+E+  +  ++    ++P+   +  +I  LC+ 
Sbjct: 445 ELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKV 504

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
             +    G+    + +G+ P+ + YS +I  + K  ++ E  +L+++M  +   P +  Y
Sbjct: 505 NKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTY 564

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI+ LC   +L E    FK M    L P   +Y SL+  + ++ N   AL +   M  
Sbjct: 565 TSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGK 624

Query: 367 EGL 369
            GL
Sbjct: 625 LGL 627



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 160/364 (43%), Gaps = 6/364 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLV--WRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++  G S ++ S++ L+   T  DR  L   + +   M      PN AT  T +  L + 
Sbjct: 200 MKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRT 259

Query: 72  GQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
            Q+ +  + L  +   G  C+       ++I    +E +++E + +   M +  ++ DT 
Sbjct: 260 RQVASAWNFLQMLCQRGNPCNTYCF--NAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTH 317

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +YS++V    K  ++ +   +  EM + G +     Y++ +   C  GK+E A  L + +
Sbjct: 318 SYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRL 377

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E  G K     +++++ GC +   IE        M+    +P    +  +I   C   N 
Sbjct: 378 EEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNL 437

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A G+  L LD G SPN +T + L+ G+ KE  I E     +++    I P L  Y  +
Sbjct: 438 TDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVI 497

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I+ LC+  K +     F  M     VP   +Y  ++   ++     +A  L  +M+ EG 
Sbjct: 498 INGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGT 557

Query: 370 KPST 373
           KP+ 
Sbjct: 558 KPNV 561



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 157/332 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF++ R LE++GF    I ++ +++   +    ++V  ++  M+ +   P+     +L
Sbjct: 368 ELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSL 427

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A C+   L   + + + +     SP V+  T L+    +E  I+E  + L ++ +  +
Sbjct: 428 IYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGI 487

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + +   Y +I+    K+   +    ++ +M+KRG+  ++ VY+  I ++ +  K+ EA  
Sbjct: 488 VPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFR 547

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M + G KP   T+  LI G     R+ E ++  + M+   L P    +  +I   C
Sbjct: 548 LFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYC 607

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  N K A  +       G S +   Y+ LIGG++K   +     L  EM  K ++P++ 
Sbjct: 608 KRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVV 667

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            YT+LI    + G   +A+  +  M    + P
Sbjct: 668 TYTNLIIGYFKIGDERKANMTYNSMLQAGITP 699



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 155/367 (42%), Gaps = 35/367 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            +D+   + + G + +L+S+++L+H                                   
Sbjct: 335 GYDLLVEMARNGIAPTLVSYSSLLH----------------------------------- 359

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G+++   ++  R+  +      IV + ++    Q   IE    L   M+  N + 
Sbjct: 360 GLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVP 419

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ ++YA  + RNL  AL V+E ML  G S N    T  +  + +   I+EA   +
Sbjct: 420 DAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFL 479

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            ++   G+ P    + ++I G  K  + +        M+ R  +P    ++ +I    + 
Sbjct: 480 HKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKA 539

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +    LD+G  PN  TY+ LI G   +  + EV+ L+  M ++ ++P    Y
Sbjct: 540 LKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILY 599

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI   C+   ++ A + F+ M    L     +Y  L+G   +      A  L EEM +
Sbjct: 600 TSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTN 659

Query: 367 EGLKPST 373
           +GL PS 
Sbjct: 660 KGLTPSV 666



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 106/206 (51%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ + AF     + Q G   +L  +  +I+ + K +++D VW I+  M++    P+    
Sbjct: 470 RMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVY 529

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I +  K  +L     +  ++  +   P V   TSLI  +  ++R+ E + L K M+ 
Sbjct: 530 SIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIW 589

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  D I Y+ ++    K  N+++AL ++  M K G SA++F+YT  IG + +   ++ 
Sbjct: 590 EGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDG 649

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEG 207
           A CLM+EM N GL P   T+  LI G
Sbjct: 650 AQCLMEEMTNKGLTPSVVTYTNLIIG 675



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/157 (18%), Positives = 68/157 (43%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +   G   ++ ++ +LI+ +   DR   V  +++HM+     P+     +LI 
Sbjct: 545 AFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIV 604

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK   ++  +++   +     S    + T LI    +   ++    L++ M  K +  
Sbjct: 605 CYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTP 664

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
             + Y+ ++    K+ +   A + Y  ML+ G + ++
Sbjct: 665 SVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDA 701


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 171/352 (48%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L + N ++  + K+ R    W ++  ML     P+  T  TLI+A    G +    ++ 
Sbjct: 150 ALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVW 209

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D++  ++  P V+  T++I  + +E  I +   L   M    M  +   Y++++    + 
Sbjct: 210 DQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQR 269

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            ++ SA+V+Y+E+LK G + N+ ++TT I  +C+  +  EA  +  EM   G+ P    +
Sbjct: 270 DDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVY 329

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L++G  ++   +E+L+  ++M    L P     + ++R LC+ G    A+  L    +
Sbjct: 330 NSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQE 389

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G + N   Y+ LI  Y + G ++E L     M    I P + +Y+SLI    + GK++ 
Sbjct: 390 DGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQI 449

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A   +  M +  + P V  Y +L+  H + G    A  L +EM+  G+ P+ 
Sbjct: 450 AMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNA 501



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 88/174 (50%), Gaps = 3/174 (1%)

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
              +L+   ++   ++E+L    ++ +   LP+C+A  + + +    G A +   +    
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWE---LFDEM 177

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L +G  P+ +TY+ LI     +G + +  +++ +M  + I P +  YT++I +LC+ G +
Sbjct: 178 LRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCI 237

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +A++ F  MK   + P    Y  L+  H ++ +   A+ L +E++  GL P+ 
Sbjct: 238 GDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNA 291



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 18/192 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  +   +  +G   +++++  LIH   K+   D  +R+++ M+EN   PN  T+  L
Sbjct: 448 QIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVL 507

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LC+  ++Q  V  +    G +CS         I  +     IEE          + +
Sbjct: 508 VDGLCRENRVQEAVRFVMEYSGLKCSD--------IHSVFSNFTIEE----------ECL 549

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I +++ Y  ++Y          A  ++  M K G   +SF YT  I   C  G +  A  
Sbjct: 550 IPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMM 609

Query: 185 LMQEMENAGLKP 196
           L  +M   G+KP
Sbjct: 610 LYADMMKIGVKP 621


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 185/403 (45%), Gaps = 54/403 (13%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT---------LIS 66
            +GF      FN L+  V  S   +  WR +          NE+ I+          +I 
Sbjct: 122 DKGFVPGSNCFNNLLTFVVGSSSFNQWWRFF----------NESKIKVDLDVYSFGIVIK 171

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+++   D+L  +     SP V++ T+LI    +   IE+   L   M +  ++ 
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVA 231

Query: 127 DTIAYSLIVYA----KVKMRNLE-------------------------------SALVVY 151
           +   Y+++++      +K +  E                                A  ++
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLF 291

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           +EM +RG S N   Y T IG  C   K  EAN +M +M++ G+ P   T+N LI+G    
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            ++ ++LS C  + SR L PS   +N ++   C+ G+   A  ++    ++G  P++ITY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITY 411

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI  +A+   +++ ++L   ME   ++P +  Y+ LI   C  G++ EA + FK+M +
Sbjct: 412 TILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVA 471

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             L P   IY ++V  + ++G+  +AL L  EM  + L P+ +
Sbjct: 472 KKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 165/343 (48%), Gaps = 4/343 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A D+   + + G   +  ++  LIH + K+      + +Y+ M E+  +PN  T   +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++  CK G+ +    + D +  +  S  ++   +LI  + +E +  E   ++ +M    +
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + I Y+ ++     +  L  AL +  ++  RG S +   Y   +  +C+ G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++EME  G+KP   T+ +LI+  A+   +E+++     M    L P    ++ +I   C
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFC 454

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A+ +  L + K   PN++ Y+ ++ GY KEG     L+L+ EME K + P + 
Sbjct: 455 IKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           +Y  +I  LC+  K +EA+   + M    +  G+D  +S++ +
Sbjct: 515 SYRYMIEVLCKERKSKEAEGLVEKM----IDTGIDPSDSILNL 553



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 169/372 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E +FD+   L + GFS +++ + TLI    K    +    ++  M +     NE T   L
Sbjct: 180 EKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVL 239

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K G  +   +M +++      P +     ++ +  ++ R ++   L   M  + +
Sbjct: 240 IHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGV 299

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ ++    +      A  V ++M   G + N   Y T I  +C  GK+ +A  
Sbjct: 300 SCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++++ GL P   T+N+L+ G  K      +    ++M  R + PS   +  +I    
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFA 419

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              N ++A  + +   + G +P+  TYS LI G+  +G++ E  +L+  M  K + P   
Sbjct: 420 RMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKV 479

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +++   C+ G    A + F+ M+   L P V  Y  ++ +  ++    +A  L E+M
Sbjct: 480 IYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539

Query: 365 VSEGLKPSTSYL 376
           +  G+ PS S L
Sbjct: 540 IDTGIDPSDSIL 551



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 34/276 (12%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANS--------------------------- 163
           Y +++ A V+ ++L+S++  + EM+ +GF   S                           
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 164 -------FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
                  + +   I   CE G+IE++  L+ E+   G  P    +  LI+GC K   IE+
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +     +M    L+ +   +  +I  L + G  KQ   M     + G  PN  TY+ ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            + K+G  ++  KL+ EM  + +S  +  Y +LI  LC+  K  EA+K    MKS  + P
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  Y +L+      G   KAL LC ++ S GL PS
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 1/207 (0%)

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           S +Y   I AY +   ++ +     EM + G  P    FN L+     +    +   +  
Sbjct: 94  SRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN 153

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +   +  L    +F  +I+  CE G  +++  +L    + GFSPN + Y+ LI G  K G
Sbjct: 154 ESKIKVDL-DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           EI++   L++EM    +      YT LI  L + G  ++  + ++ M+   + P +  Y 
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGL 369
            ++  H + G    A  L +EM   G+
Sbjct: 273 CVMNQHCKDGRTKDAFKLFDEMRERGV 299



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 35/270 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + +RG S +++++NTLI  + +  + +   ++   M  +   PN  T  TLI 
Sbjct: 287 AFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLID 346

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+L   + +   +  +  SP ++    L+    ++        ++K M  + +  
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406

Query: 127 DTIAYSLIVYAKVKMRNLESALVV-----------------------------------Y 151
             I Y++++    +M N+E A+ +                                   +
Sbjct: 407 SKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           + M+ +    N  +Y T +  YC+ G    A  L +EME   L P   ++  +IE   K 
Sbjct: 467 KLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKE 526

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           ++ +E+    E+M+   + PS S  N + R
Sbjct: 527 RKSKEAEGLVEKMIDTGIDPSDSILNLISR 556


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDR----NDLVWRIYQHMLENIRYPNEATIRTL 64
           D  R L  +  + + + +NTLI     S R     DL   +Y +M+     P+  T   +
Sbjct: 327 DEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDL---LYNNMVIAGYEPDAYTFNIM 383

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K G L + +++L+ +  KR  P VI  T LI    ++ R+EE   ++  M  K +
Sbjct: 384 IDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGL 443

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +T+ Y+ ++ A  K  N+E AL ++ EM  +G   + + + + I   C+  K+EEA  
Sbjct: 444 SLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALS 503

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M   G+     T+N L+        I+++    ++M+ R        +N +I+ LC
Sbjct: 504 LYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALC 563

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++  G+    L KG  P  I+ + LI G  + G++ + LK   +M ++ ++P + 
Sbjct: 564 KTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIV 623

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y SLI+ LC+ G ++EA   F  ++S  + P    Y +L+  H  +G    A  L  + 
Sbjct: 624 TYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKG 683

Query: 365 VSEGLKPS 372
           V  G  P+
Sbjct: 684 VDSGFIPN 691



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 175/364 (48%), Gaps = 5/364 (1%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA +V   +  RG S ++ +F  ++  +      D    + + M ++   PN    +TLI
Sbjct: 188 VAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLI 247

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            ALC+  ++   + +L+ +    C P V     +I  + +  RI E   LL RML +   
Sbjct: 248 HALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFS 307

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NC 184
            D + Y  +++   +M  ++ A      +L +  + N+ +Y T I  Y   G+ EEA + 
Sbjct: 308 TDALTYGYLMHGLCRMGQVDEA----RALLNKIPNPNTVLYNTLISGYVASGRFEEAKDL 363

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   M  AG +P   TFN++I+G  K   +  +L    +M++++  P+   +  +I   C
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFC 423

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  ++     KG S N + Y+ LI    K+G I+E L+L+ EM  K   P + 
Sbjct: 424 KQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIY 483

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + SLI+ LC+  K+EEA   +  M    ++     Y +LV   L + +  +A  L +EM
Sbjct: 484 TFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543

Query: 365 VSEG 368
           +  G
Sbjct: 544 LFRG 547



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 147/305 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +  + F  ++I++  LI+   K  R +    I   M       N      LI 
Sbjct: 396 ALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLIC 455

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G ++  + +   + GK C P +    SLI  + +  ++EE + L   M  + +I 
Sbjct: 456 ALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIA 515

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T+ Y+ +V+A +   +++ A  + +EML RG   ++  Y   I A C+ G +E+   L 
Sbjct: 516 NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLF 575

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G+ P   + N+LI G  +  ++ ++L + + M+ R L P    +N +I  LC+ 
Sbjct: 576 EEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKM 635

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ ++A+ +      +G  P+ ITY+ LI  +  EG   +   L Y+       P    +
Sbjct: 636 GHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTW 695

Query: 307 TSLIS 311
           + LI+
Sbjct: 696 SILIN 700



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 160/351 (45%), Gaps = 7/351 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++ ++   D   +   ++  ML     P   T   ++ ALC   ++ +   +L  +
Sbjct: 172 SYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDM 231

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C P  ++  +LI  + +  R+ E + LL+ M       D   ++ +++   +   +
Sbjct: 232 AKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRI 291

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  + + ML RGFS ++  Y   +   C  G+++EA  L+ ++ N    P    +N L
Sbjct: 292 HEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTL 347

Query: 205 IEGCAKAKRIEES--LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           I G   + R EE+  L Y   M+     P    FN MI  L + G    A  +L   + K
Sbjct: 348 ISGYVASGRFEEAKDLLY-NNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
            F PN ITY+ LI G+ K+G ++E  ++   M  K +S     Y  LI +LC+ G +EEA
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + F  M      P +  + SL+    +     +AL L  +M  EG+  +T
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANT 517


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 159/341 (46%), Gaps = 1/341 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  +   ++       ++ +N  I    K+ + D+ W+ +  M  +   P++ T  ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK  +L   V++ +++   R  P      ++I+      + +E   LL+R   K  
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I   IAY+ I+    K R +E AL ++EEM KR    N   Y   I   C  GK+  A  
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALE 425

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  +ME AGL P   T N++I+   KA+++EE+ S  E M  +   P+   F+ +I  L 
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +CG    A  +    LD G  P  I Y+ LI  + K G  ++  K+Y EM +   SP L 
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 545

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              + +  + + G+ E+    F+ + +H  +P    Y  L+
Sbjct: 546 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 586



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 182/370 (49%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +    + +G   S+I++N ++  + K  R +   RI++ M  +   PN  T   
Sbjct: 351 FDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNI 409

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC+ G+L   +++ D +      P V+    +I R+ + +++EE   + + M  K 
Sbjct: 410 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + +S ++    K   ++ A  +YE+ML  G    + VYT+ I ++ + G+ E+ +
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM + G  P     N  ++   KA   E+  +   ++ +   +P   +++ +I  L
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 589

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A +   +     ++G   +   Y+ +I G+ K G++ +  +L  EM+ K   PT+
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS+ +   V +Y SL+    + G   +A  + EE
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709

Query: 364 MVSEGLKPST 373
           ++ +GL P+ 
Sbjct: 710 LMQKGLTPNV 719



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 171/384 (44%), Gaps = 7/384 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R    AFD+ + + +  F  +  ++  LI  +++    D +  ++  M E     N    
Sbjct: 174 RKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLF 233

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI    + G++   + +LD +        +++    I    +  +++        M  
Sbjct: 234 TTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKS 293

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D + Y+ ++    K   L+ A+ ++E++ +      ++ Y T I  Y   GK +E
Sbjct: 294 HGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDE 353

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++  +  G  P    +N ++    K +R+EE+L   E+ M R  +P+   +N +I 
Sbjct: 354 AYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEE-MKRDAVPNVPTYNILID 412

Query: 242 RLCECGNAKQANGMLTLALD---KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            LC  G   + N  L +  D    G  PN +T + +I    K  +++E   ++  M+ K 
Sbjct: 413 MLCREG---KLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 469

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            +P    ++SLI  L +CG++++A   ++ M     VPG  +Y SL+    + G K    
Sbjct: 470 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 529

Query: 359 HLCEEMVSEGLKPSTSYLCSASTC 382
            + +EMV  G  P  + + +   C
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYMDC 553



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 164/352 (46%), Gaps = 2/352 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++F++LI  + K  R D  + +Y+ ML+    P      +LI +  K G+ +    +   
Sbjct: 475 VTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 534

Query: 84  IHGKRCSP-MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           +    CSP + ++NT +   + +    E+G  L + +     I D  +YS++++  VK  
Sbjct: 535 MVHTGCSPDLTLINTYMDC-VFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 593

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
                  ++  M ++G   ++  Y   I  +C+ GK+ +A  L++EM+  G  P   T+ 
Sbjct: 594 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYG 653

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +I+G AK  R++E+    E+  S  +  +   ++ +I    + G   +A  ++   + K
Sbjct: 654 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 713

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G +PN  T++ L+    K  EI E L  +  M+     P    Y+ LI+ LC+  K  +A
Sbjct: 714 GLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKA 773

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             +++ M+   L P    Y +++    + GN  +A  L     + G  P ++
Sbjct: 774 FVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 825



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 146/321 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N LI ++ +  + +    I   M     +PN  T+  +I  LCK  +L+    + + +
Sbjct: 406 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 465

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K C+P  +  +SLI  + +  R+++   L ++ML    +   I Y+ ++ +  K    
Sbjct: 466 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRK 525

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E    +Y+EM+  G S +  +  T++    + G+ E+   L +E+   G  P   ++++L
Sbjct: 526 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 585

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  KA    E+      M  +  +    A+N +I   C+ G   +A  +L     KG 
Sbjct: 586 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 645

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  +TY  +I G AK   + E   L+ E +   I   +  Y+SLI    + G+++EA  
Sbjct: 646 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 705

Query: 325 YFKIMKSHSLVPGVDIYESLV 345
             + +    L P V  +  L+
Sbjct: 706 IMEELMQKGLTPNVYTWNCLL 726



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 149/314 (47%), Gaps = 1/314 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N+L+ V+ ++   D + RI + M  +   P+      L++   K  +L+   D++  +
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +  P     T LI  + +    +  ++L  +M       +   ++ ++    +   +
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           ++AL + +EM      A+  +Y   I  + + GK++ +     EM++ GL P D T+  +
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    KA R++E++   EQ+   + +P   A+N MI      G   +A G+L     KG 
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ I Y+ ++    K+  ++E L+++ EM+  ++ P +P Y  LI  LC+ GKL  A +
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALE 425

Query: 325 YFKIMKSHSLVPGV 338
               M+   L P V
Sbjct: 426 IRDDMERAGLFPNV 439



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 143/311 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +   GF     S++ LIH + K+   +  + ++  M E     +      +I   CK 
Sbjct: 568 REINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKS 627

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++     +L+ +  K   P V+   S+I  + + +R++E  +L +      +  + + Y
Sbjct: 628 GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVY 687

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S ++    K+  ++ A ++ EE++++G + N + +   + A  +  +I EA    Q M++
Sbjct: 688 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 747

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
               P   T+++LI G  + ++  ++  + ++M    L P+   +  MI  L + GN  +
Sbjct: 748 LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 807

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A+G+ +     G  P+  +Y+ +I G +   +  +   L+ E   K  +        L+ 
Sbjct: 808 ASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLD 867

Query: 312 SLCQCGKLEEA 322
           +L +   LE+A
Sbjct: 868 ALHKAECLEQA 878



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 102/217 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++ +G   +++++ ++I  + K DR D  + +++    N    N     +LI 
Sbjct: 633 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 692

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +++ +  K  +P V     L+  +++ E I E ++  + M       
Sbjct: 693 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 752

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS+++    ++R    A V ++EM K G   N+  YTT I    + G I EA+ L 
Sbjct: 753 NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 812

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
              +  G  P   ++N +IEG + A +  ++ +  E+
Sbjct: 813 SRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 107/260 (41%)

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           +H   AY+ ++    +    +    + EEM   GF  +S +    +    +  K+ EA  
Sbjct: 122 VHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFD 181

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++Q M     +P    + +LI   ++ +  +  L    QM       +   F  +IR   
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFA 241

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A  +L          + + Y+  I  + K G++    K ++EM+   + P   
Sbjct: 242 REGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV 301

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YTS+I  LC+  +L+EA + F+ ++ +  VP    Y +++  +   G   +A  L E  
Sbjct: 302 TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361

Query: 365 VSEGLKPSTSYLCSASTCRG 384
            ++G  PS        TC G
Sbjct: 362 KAKGSIPSVIAYNCILTCLG 381


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 3/368 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGG 72
           L + G     I  NT +  +  + R D    +  H +  +   P+  +  T+I +LC G 
Sbjct: 191 LLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGS 250

Query: 73  QLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           + Q  +DML R+  G  CSP V+  T +I  +  E  I +   L   M++K ++ + + Y
Sbjct: 251 RSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTY 310

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + IV+A  K R ++ A +V  +M       +   YT  I  Y   G+ +EA  + +EM  
Sbjct: 311 NSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTR 370

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL P   TFN L++   K KR +E+      + ++   P   +++ ++      G    
Sbjct: 371 EGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVD 430

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            N +     D G   +   ++ LI  +AK G + E L ++ EM  + +SP +  Y ++I+
Sbjct: 431 MNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIA 490

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL-K 370
           +LC+ G+L +A +    M S  L P   +Y SL+      G+  KA  L  EM+ +G+ +
Sbjct: 491 ALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPR 550

Query: 371 PSTSYLCS 378
           P+ ++  S
Sbjct: 551 PNITFFSS 558



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 158/352 (44%), Gaps = 1/352 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++  +IH  +   R     ++++ M      P+  T  +L+ +LCK  + +   ++   
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHS 402

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           I  K   P +I  + L+     E R  +   L   M    ++ D+  +++++ A  K   
Sbjct: 403 IATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGM 462

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ AL+++ EM  +G S N   Y T I A C  G++ +A   + +M + GLKP    ++ 
Sbjct: 463 MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS 522

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKL-LPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           LI+G      + ++     +MM + +  P+ + F+ +I  LC  G    A  +  L +  
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHI 582

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P+  T++ LI GY   G++ +   +   M      P +  Y++LI+   + G++++ 
Sbjct: 583 GDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              F+ M    + P    Y  ++      G  + A  +  EM+  G   S S
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 163/352 (46%), Gaps = 1/352 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI+   K    D    I+  M      PN  T  T+I+ALC+ G+L   ++ L ++ 
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-SLIVYAKVKMRNL 144
                P  +V  SLI        + +   L+  M+ + +    I + S I+++      +
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            +A  V+  ++  G   + F + + I  YC  GK+++A  ++  M +AG +P   T++ L
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  K+ RI++ L    +M+ +++ P+   ++ ++  L   G    A  M    ++ G 
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT 689

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           + +  TY+ ++ G  +     E + L++++   ++   +    ++I +L +  + EEA  
Sbjct: 690 AMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHD 749

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            F  + +  LVP    Y  ++   L++G+  +A  +   M   G  PS+  L
Sbjct: 750 LFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLL 801



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 4/303 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+++IH +    R      ++  ++     P+  T  +LI   C  G++     +LD + 
Sbjct: 556 FSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMV 615

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                P V+  ++LI    +  RI++G++L + ML K +   T+ YSL++    +     
Sbjct: 616 SAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTS 675

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A  ++ EM++ G + +   YT  +   C     +EA  L  ++    LK      N +I
Sbjct: 676 AAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMI 735

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
               K KR EE+      + +  L+P+ S +  MI  L + G+ ++A+ M +     G +
Sbjct: 736 HALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCA 795

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS--LISSLCQCGKLEEAD 323
           P+    + +I    ++GEI  V   YY  +      +L A T+  LIS     G+  E  
Sbjct: 796 PSSRLLNDIIRMLLQKGEI--VKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQI 853

Query: 324 KYF 326
           K+ 
Sbjct: 854 KFL 856



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/281 (20%), Positives = 120/281 (42%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           + + M + I  PN     ++I +LC  G++    D+ + +      P +    SLI    
Sbjct: 540 VSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYC 599

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
              ++++   +L  M+      D + YS ++    K   ++  L+++ EML +     + 
Sbjct: 600 LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTV 659

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            Y+  +      G+   A  +  EM  +G      T+ ++++G  +    +E+++   ++
Sbjct: 660 TYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKL 719

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
            +  L    +  N MI  L +    ++A+ +       G  PN  TY  +I    KEG +
Sbjct: 720 GAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSV 779

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           +E   ++  ME    +P+      +I  L Q G++ +A  Y
Sbjct: 780 EEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYY 820



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 37/276 (13%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEM 189
           Y +++    + R  +     +  +L+ G   +  V  TF+   C   + +EA + L+  M
Sbjct: 168 YGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRM 227

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM---------------------MSRK 228
              G  P   ++N +I+      R +E+L    +M                     M  +
Sbjct: 228 SELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGE 287

Query: 229 LLPSCSAFNEMIRR---------------LCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           +  +C+ FNEM+++               LC+     +A  +L    D    P+E+TY+ 
Sbjct: 288 ISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTA 347

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           +I GY+  G  +E  K++ EM  + + P +  + SL+ SLC+  + +EA + F  + +  
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             P +  Y  L+  +  +G      +L   M   G+
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 37/211 (17%)

Query: 199 ETFNLLIEGCAK-----------------------------------AKRIEESLSYCEQ 223
            T+ +L++ C +                                   AKR +E+LS    
Sbjct: 166 HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLH 225

Query: 224 MMSR-KLLPSCSAFNEMIRRLCECGNAKQANGM-LTLALDKGFSPNEITYSHLIGGYAKE 281
            MS    +P   ++N +I+ LC    +++A  M L +    G SP+ ++Y+ +I G   E
Sbjct: 226 RMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFME 285

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           GEI +   L+ EM  K + P +  Y S++ +LC+   +++A+   + M  +S+ P    Y
Sbjct: 286 GEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTY 345

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +++  +   G   +A  + +EM  EGL P 
Sbjct: 346 TAMIHGYSCLGRWKEAAKMFKEMTREGLIPD 376



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/199 (15%), Positives = 88/199 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           + ++++ ++  + ++ R     +++  M+E+    + +T   ++  LC+       + + 
Sbjct: 657 TTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLF 716

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++        + +  ++I  + + +R EE   L   +    ++ +   Y +++   +K 
Sbjct: 717 HKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKE 776

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            ++E A +++  M K G + +S +    I    + G+I +A   M +++   +     T 
Sbjct: 777 GSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTT 836

Query: 202 NLLIEGCAKAKRIEESLSY 220
           +LLI   A   R  E + +
Sbjct: 837 SLLISLFASKGRYREQIKF 855


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 179/353 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++FNTLI  + ++   + V  +   M E+   P+     T+I  +CK G L+   ++L
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+      P V+   +++  +   ER +E   LL  M +K+   D + ++++V    + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++  + + E+ML  G   +   YTT I  +C+ G I+EA  L++ M + G KP   ++
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++++G   A R  ++     QM+ +   P+   FN +I  LC+ G  +QA  +L   L 
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ I+YS +I G  K G+ +E L+L   M  K ISP    Y+S+  +L + G++ +
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + F  +K  ++     +Y +++    ++    +A+     MVS G  P+ S
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 142/309 (45%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++A+C+ G +   V +L ++    C   ++   +++  +   +R  +   L+  M+R +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + ++ ++    +    E    V  +M + G + +  +Y T I   C+ G +E AN
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M + GLKP    +N +++G   A+R +E+     +M  +        FN ++   
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +   +L   L  G  P+ ITY+ +I G+ KEG I E + L   M      P  
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT ++  LC  G+  +A++    M      P    + +L+    +KG   +A+ L ++
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 364 MVSEGLKPS 372
           M+  G  P 
Sbjct: 487 MLVNGCSPD 495



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 160/367 (43%), Gaps = 35/367 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R L   G    ++S+N ++  +  + R   V  +   M+     PN  T  TLI 
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G  +   ++L ++    C+P + +  ++I  I +E  +E    +L RM    +  
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKP 319

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++         + A  +  EM ++    +   +   +  +C+ G ++    L+
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G  P   T+  +I G  K   I+E++   + M S    P+  ++  +++ LC  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +++  + +G  PN +T++ LI    K+G +++ ++L  +M     SP L +Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +++I  L + GK EEA                                   L L   MV+
Sbjct: 500 STVIDGLGKAGKTEEA-----------------------------------LELLNVMVN 524

Query: 367 EGLKPST 373
           +G+ P+T
Sbjct: 525 KGISPNT 531



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 144/318 (45%), Gaps = 2/318 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER-IEEGMV 114
           P       ++ A C+ G  +  V +L+ +H K C+ +   N +L+L  I E+  ++E + 
Sbjct: 144 PIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCT-LDTGNCNLVLNAICEQGCVDEAVG 202

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL+++       D ++Y+ ++      +       + +EM++   + N   + T IG  C
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G  E  + ++ +M   G  P    +  +I+G  K   +E +     +M S  L P+  
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +++ LC     K+A  +L+    K    +++T++ L+  + + G +  V++L  +M
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                 P +  YT++I+  C+ G ++EA    K M S    P    Y  ++      G  
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442

Query: 355 AKALHLCEEMVSEGLKPS 372
             A  L  +M+ +G  P+
Sbjct: 443 VDAEELMSQMIQQGCPPN 460



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 142/335 (42%), Gaps = 13/335 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   ++  LC  G++   +++LD +  K C+P+  +   ++    +       + +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC- 174
           L+ M  K    DT   +L++ A  +   ++ A+ +  ++   G  A+   Y   +   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 175 --EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
              +G +EE   LM EM      P   TFN LI    +    E       QM      P 
Sbjct: 229 AKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I  +C+ G+ + AN +L      G  PN + Y+ ++ G       +E  +L  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM  K        +  L+   CQ G ++   +  + M SH  +P V  Y +++    ++G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 353 NKAKALHLCEEMVSEGLKPST-SY------LCSAS 380
              +A+ L + M S G KP+T SY      LCSA 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 13/274 (4%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A  + + +   G   + +S+  ++  +  + R      +   M++    PN  T  
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G ++  +++L ++    CSP +I  +++I  + +  + EE + LL  M+ K
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +TI YS I  A  +   +   + +++ +      +++ +Y   I + C+  + + A
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                 M + G  P + T+ +LI+G A     +E+     ++ SR       A  + + R
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSR------GALRKHLMR 639

Query: 243 LCECGNAKQANGM------LTLALDKGFS-PNEI 269
                N  Q NG       LT A+D  +  P EI
Sbjct: 640 HFGISNCTQENGKQKCEENLTSAVDNNYKLPIEI 673


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 172/353 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +  S   I++ TLI    +  +      ++  M+     P+E T  TLI   CK G++  
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + + +     +P ++   +LI  + +   ++    LL  M +K +  +   Y+ +V 
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K  N+E A+ + +EM   G   ++  YTT I AYC  G I++A+ L+QEM + GL+P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TFN+L+ G      +E+       M+ + ++P    +N ++++ C   +      + 
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               ++G +P+  TY+ LI G+ K   ++E   LY EM  K   PT+ +Y +LI    + 
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            K  EA + F+ M+ H LV   +IY   V +  E+G+    L+LC+E + + L
Sbjct: 692 RKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCL 744



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 173/369 (46%), Gaps = 5/369 (1%)

Query: 5   EVAFDV-CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           E+A  V C Y    G S +  S+N +I+ + +  +     R+   M      P+  +  T
Sbjct: 243 EMAIKVFCEY----GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C  G+L+  + ++D +  K   P      S+IL + +  +  E   +L+ M+ + 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +I D + Y+ +++   K+ ++ +A   ++EML +  S +   YTT I  + + GK+ E  
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM + GLKP + T+  LI+   KA  +  + S   +M+   + P+   +  +I  L
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G    AN +L     KG   N   Y+ ++ G  K G I++ +KL  EME   I P  
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT++I + C+ G +++A K  + M    L P V  +  L+      G       L   
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 364 MVSEGLKPS 372
           M+ +G+ P 
Sbjct: 599 MLEKGIVPD 607



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 174/363 (47%), Gaps = 1/363 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   +  ++N++I ++ K  ++    ++ + M+     P+     TLI    K G 
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++T     D +  K+ SP  I  T+LI    Q  ++ E   L   M+ + +  D + Y+ 
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   + +A  ++ EM++ G + N   Y   I   C++G+++ AN L+ EM   G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+     +N ++ G  KA  IE+++   ++M    + P    +  +I   C  G+  +A+
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   LD+G  P  +T++ L+ G+   G +++  +L   M  K I P    Y +L+   
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
           C    +    K +K M++  + P  + Y  L+  H +  N  +A  L +EM+ +G  P+ 
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 373 TSY 375
           TSY
Sbjct: 679 TSY 681



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 157/346 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           + + TLIH   K        + +  ML     P+  T  TLI    +GG++    ++   
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +   P  +  T+LI    +   +     L   M++  M  + + Y  ++    K   
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L++A  + +EM K+G   N  +Y + +   C+ G IE+A  LM+EME AG+ P   T+  
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+   +   I+++    ++M+ R L P+   FN ++   C  G  +  + +L   L+KG
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ ITY+ L+  +     +    K+Y  M  + ++P    Y  LI   C+   L+EA 
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             +K M     VP V  Y +L+    +K    +A  L EEM   GL
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGL 709



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 3/229 (1%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E A+ V+ E    G S N+  Y   I + C  GK++EA+ L+ +M+     P   +++ 
Sbjct: 242 IEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G      ++++L   + M  + L P+   +N +I  LC+ G + +A  +L   + + 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ + Y+ LI G+ K G ++   K + EM  K ISP    YT+LI    Q GK+ E  
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F  M S  L P    Y +L+ ++ + G    A  L  EMV  G+ P+
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPN 467



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 102/226 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + + +E  G     I++ T+I    +    D   ++ Q ML+    P   T   L
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++  C  G L+    +L  +  K   P  I   +L+ +      +     + KRM  + +
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D+  Y++++    K RNL+ A  +Y+EM+++G+      Y   I  + +  K  EA  
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARE 699

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           L +EM   GL    E +N  ++ C +   +E +L+ C++ + + LL
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLL 745


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 179/353 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++FNTLI  + ++   + V  +   M E+   P+     T+I  +CK G L+   ++L
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+      P V+   +++  +   ER +E   LL  M +K+   D + ++++V    + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++  + + E+ML  G   +   YTT I  +C+ G I+EA  L++ M + G KP   ++
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++++G   A R  ++     QM+ +   P+   FN +I  LC+ G  +QA  +L   L 
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ I+YS +I G  K G+ +E L+L   M  K ISP    Y+S+  +L + G++ +
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + F  +K  ++     +Y +++    ++    +A+     MVS G  P+ S
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 142/309 (45%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++A+C+ G +   V +L ++    C   ++   +++  +   +R  +   L+  M+R +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + ++ ++    +    E    V  +M + G + +  +Y T I   C+ G +E AN
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M + GLKP    +N +++G   A+R +E+     +M  +        FN ++   
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +   +L   L  G  P+ ITY+ +I G+ KEG I E + L   M      P  
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT ++  LC  G+  +A++    M      P    + +L+    +KG   +A+ L ++
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 364 MVSEGLKPS 372
           M+  G  P 
Sbjct: 487 MLVNGCSPD 495



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 160/367 (43%), Gaps = 35/367 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R L   G    ++S+N ++  +  + R   V  +   M+     PN  T  TLI 
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G  +   ++L ++    C+P + +  ++I  I +E  +E    +L RM    +  
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKP 319

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++         + A  +  EM ++    +   +   +  +C+ G ++    L+
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G  P   T+  +I G  K   I+E++   + M S    P+  ++  +++ LC  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +++  + +G  PN +T++ LI    K+G +++ ++L  +M     SP L +Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +++I  L + GK EEA                                   L L   MV+
Sbjct: 500 STVIDGLGKAGKTEEA-----------------------------------LELLNVMVN 524

Query: 367 EGLKPST 373
           +G+ P+T
Sbjct: 525 KGISPNT 531



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 144/318 (45%), Gaps = 2/318 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER-IEEGMV 114
           P       ++ A C+ G  +  V +L+ +H K C+ +   N +L+L  I E+  ++E + 
Sbjct: 144 PIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCT-LDTGNCNLVLNAICEQGCVDEAVG 202

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL+++       D ++Y+ ++      +       + +EM++   + N   + T IG  C
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G  E  + ++ +M   G  P    +  +I+G  K   +E +     +M S  L P+  
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +++ LC     K+A  +L+    K    +++T++ L+  + + G +  V++L  +M
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                 P +  YT++I+  C+ G ++EA    K M S    P    Y  ++      G  
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442

Query: 355 AKALHLCEEMVSEGLKPS 372
             A  L  +M+ +G  P+
Sbjct: 443 VDAEELMSQMIQQGCPPN 460



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 142/335 (42%), Gaps = 13/335 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   ++  LC  G++   +++LD +  K C+P+  +   ++    +       + +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC- 174
           L+ M  K    DT   +L++ A  +   ++ A+ +  ++   G  A+   Y   +   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 175 --EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
              +G +EE   LM EM      P   TFN LI    +    E       QM      P 
Sbjct: 229 AKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I  +C+ G+ + AN +L      G  PN + Y+ ++ G       +E  +L  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM  K        +  L+   CQ G ++   +  + M SH  +P V  Y +++    ++G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 353 NKAKALHLCEEMVSEGLKPST-SY------LCSAS 380
              +A+ L + M S G KP+T SY      LCSA 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 13/274 (4%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A  + + +   G   + +S+  ++  +  + R      +   M++    PN  T  
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G ++  +++L ++    CSP +I  +++I  + +  + EE + LL  M+ K
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +TI YS I  A  +   +   + +++ +      +++ +Y   I + C+  + + A
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                 M + G  P + T+ +LI+G A     +E+     ++ SR       A  + + R
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSR------GALRKHLMR 639

Query: 243 LCECGNAKQANGM------LTLALDKGFS-PNEI 269
                N  Q NG       LT A+D  +  P EI
Sbjct: 640 HFGISNCTQENGKQKCEENLTSAVDNNYKLPIEI 673


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 174/358 (48%), Gaps = 4/358 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF    IS+ TLIH + K         + Q +  N+  PN     T+I ++CK   +   
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+   +  K  SP V+  ++LI       ++ + + L  +M+ +N+  D   ++++V A
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++    V++ M+K+G   N   Y + +  YC   ++ +A  +   M   G+ P 
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            ++++++I G  K K+ +E+++  ++M  + ++P    ++ +I  L + G    A  ++ 
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+G  P   TY+ ++    K  ++ + + L  +++ K I P +  Y+ LI  LCQ G
Sbjct: 425 QMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSG 484

Query: 318 KLEEADKYFK--IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           KLE+A K F+  ++K H+L   VD Y  ++     +G   +AL L  +M   G  P  
Sbjct: 485 KLEDARKVFEGLLVKGHNL--NVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 168/359 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E RG   +L++ N LI+   +       + ++  +L+    P+  T  TLI  LC  GQ
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q      D++         I   +LI  + +       + LL+R+    +  + + Y+ 
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +  K++ +  A  ++ EM+ +G S +   Y+  I  +C  GK+ +A  L  +M    
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   TFN+L+    K  +++E  +  + MM + + P+   +N ++   C      +A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G +P+  +YS +I G+ K  +  E + L+ EM  K+I P +  Y+SLI  L
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + G++  A +    M    + P +  Y S++    +     KA+ L  ++  +G++P+
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 163/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L +R  +     FN ++  + KS     V  + Q M      PN      LI+  C+ G 
Sbjct: 76  LLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGL 135

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +  +I      P  I  T+LI  +  + +I++  +   +++      D I+Y  
Sbjct: 136 IPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGT 195

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   K+    +AL + + +       N  +Y T I + C+   + EA  L  EM + G
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG 255

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ LI G     ++ +++    +M+   + P    FN ++   C+ G  K+  
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +  + + +G  PN +TY+ L+ GY    E+ +   ++  M    ++P + +Y+ +I+  
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+  K +EA   FK M   +++P V  Y SL+    + G  + AL L ++M   G+ P+
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/270 (19%), Positives = 119/270 (44%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+  +  FD+   + ++G   + +++N+L+         +    I+  M +    P+  +
Sbjct: 311 MKEGKTVFDM---MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I+  CK  +    +++   +H K   P V+  +SLI  + +  RI   + L+ +M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +      Y+ I+ A  K+  ++ A+ +  ++  +G   N + Y+  I   C+ GK+E
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLE 487

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  + + +   G     +T+ ++I+G        E+L+   +M     +P    +  +I
Sbjct: 488 DARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
             L +      A  +L   + +G  P +I 
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGVRPRQIA 577


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 179/353 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++FNTLI  + ++   + V  +   M E+   P+     T+I  +CK G L+   ++L
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+      P V+   +++  +   ER +E   LL  M +K+   D + ++++V    + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++  + + E+ML  G   +   YTT I  +C+ G I+EA  L++ M + G KP   ++
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++++G   A R  ++     QM+ +   P+   FN +I  LC+ G  +QA  +L   L 
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ I+YS +I G  K G+ +E L+L   M  K ISP    Y+S+  +L + G++ +
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + F  +K  ++     +Y +++    ++    +A+     MVS G  P+ S
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 142/309 (45%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++A+C+ G +   V +L ++    C   ++   +++  +   +R  +   L+  M+R +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + ++ ++    +    E    V  +M + G + +  +Y T I   C+ G +E AN
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M + GLKP    +N +++G   A+R +E+     +M  +        FN ++   
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +   +L   L  G  P+ ITY+ +I G+ KEG I E + L   M      P  
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT ++  LC  G+  +A++    M      P    + +L+    +KG   +A+ L ++
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 364 MVSEGLKPS 372
           M+  G  P 
Sbjct: 487 MLVNGCSPD 495



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 160/367 (43%), Gaps = 35/367 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R L   G    ++S+N ++  +  + R   V  +   M+     PN  T  TLI 
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G  +   ++L ++    C+P + +  ++I  I +E  +E    +L RM    +  
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKP 319

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++         + A  +  EM ++    +   +   +  +C+ G ++    L+
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G  P   T+  +I G  K   I+E++   + M S    P+  ++  +++ LC  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +++  + +G  PN +T++ LI    K+G +++ ++L  +M     SP L +Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +++I  L + GK EEA                                   L L   MV+
Sbjct: 500 STVIDGLGKAGKTEEA-----------------------------------LELLNVMVN 524

Query: 367 EGLKPST 373
           +G+ P+T
Sbjct: 525 KGISPNT 531



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 144/318 (45%), Gaps = 2/318 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER-IEEGMV 114
           P       ++ A C+ G  +  V +L+ +H K C+ +   N +L+L  I E+  ++E + 
Sbjct: 144 PIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCT-LDTGNCNLVLNAICEQGCVDEAVG 202

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL+++       D ++Y+ ++      +       + +EM++   + N   + T IG  C
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G  E  + ++ +M   G  P    +  +I+G  K   +E +     +M S  L P+  
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +++ LC     K+A  +L+    K    +++T++ L+  + + G +  V++L  +M
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                 P +  YT++I+  C+ G ++EA    K M S    P    Y  ++      G  
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442

Query: 355 AKALHLCEEMVSEGLKPS 372
             A  L  +M+ +G  P+
Sbjct: 443 VDAEELMSQMIQQGCPPN 460



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 142/335 (42%), Gaps = 13/335 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   ++  LC  G++   +++LD +  K C+P+  +   ++    +       + +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC- 174
           L+ M  K    DT   +L++ A  +   ++ A+ +  ++   G  A+   Y   +   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 175 --EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
              +G +EE   LM EM      P   TFN LI    +    E       QM      P 
Sbjct: 229 AKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I  +C+ G+ + AN +L      G  PN + Y+ ++ G       +E  +L  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM  K        +  L+   CQ G ++   +  + M SH  +P V  Y +++    ++G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 353 NKAKALHLCEEMVSEGLKPST-SY------LCSAS 380
              +A+ L + M S G KP+T SY      LCSA 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 107/228 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A  + + +   G   + +S+  ++  +  + R      +   M++    PN  T  
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G ++  +++L ++    CSP +I  +++I  + +  + EE + LL  M+ K
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +TI YS I  A  +   +   + +++ +      +++ +Y   I + C+  + + A
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
                 M + G  P + T+ +LI+G A     +E+     ++ SR  L
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 179/353 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++FNTLI  + ++   + V  +   M E+   P+     T+I  +CK G L+   ++L
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+      P V+   +++  +   ER +E   LL  M +K+   D + ++++V    + 
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++  + + E+ML  G   +   YTT I  +C+ G I+EA  L++ M + G KP   ++
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++++G   A R  ++     QM+ +   P+   FN +I  LC+ G  +QA  +L   L 
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ I+YS +I G  K G+ +E L+L   M  K ISP    Y+S+  +L + G++ +
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + F  +K  ++     +Y +++    ++    +A+     MVS G  P+ S
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 602



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 142/309 (45%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++A+C+ G +   V +L ++    C   ++   +++  +   +R  +   L+  M+R +
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + ++ ++    +    E    V  +M + G + +  +Y T I   C+ G +E AN
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M + GLKP    +N +++G   A+R +E+     +M  +        FN ++   
Sbjct: 307 EILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFF 366

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +   +L   L  G  P+ ITY+ +I G+ KEG I E + L   M      P  
Sbjct: 367 CQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNT 426

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT ++  LC  G+  +A++    M      P    + +L+    +KG   +A+ L ++
Sbjct: 427 VSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 486

Query: 364 MVSEGLKPS 372
           M+  G  P 
Sbjct: 487 MLVNGCSPD 495



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 160/367 (43%), Gaps = 35/367 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R L   G    ++S+N ++  +  + R   V  +   M+     PN  T  TLI 
Sbjct: 200 AVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIG 259

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G  +   ++L ++    C+P + +  ++I  I +E  +E    +L RM    +  
Sbjct: 260 YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKP 319

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++         + A  +  EM ++    +   +   +  +C+ G ++    L+
Sbjct: 320 NVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELL 379

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G  P   T+  +I G  K   I+E++   + M S    P+  ++  +++ LC  
Sbjct: 380 EQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +++  + +G  PN +T++ LI    K+G +++ ++L  +M     SP L +Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +++I  L + GK EEA                                   L L   MV+
Sbjct: 500 STVIDGLGKAGKTEEA-----------------------------------LELLNVMVN 524

Query: 367 EGLKPST 373
           +G+ P+T
Sbjct: 525 KGISPNT 531



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 144/318 (45%), Gaps = 2/318 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER-IEEGMV 114
           P       ++ A C+ G  +  V +L+ +H K C+ +   N +L+L  I E+  ++E + 
Sbjct: 144 PIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCT-LDTGNCNLVLNAICEQGCVDEAVG 202

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL+++       D ++Y+ ++      +       + +EM++   + N   + T IG  C
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLC 262

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G  E  + ++ +M   G  P    +  +I+G  K   +E +     +M S  L P+  
Sbjct: 263 RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVV 322

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +++ LC     K+A  +L+    K    +++T++ L+  + + G +  V++L  +M
Sbjct: 323 CYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                 P +  YT++I+  C+ G ++EA    K M S    P    Y  ++      G  
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442

Query: 355 AKALHLCEEMVSEGLKPS 372
             A  L  +M+ +G  P+
Sbjct: 443 VDAEELMSQMIQQGCPPN 460



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 142/335 (42%), Gaps = 13/335 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   ++  LC  G++   +++LD +  K C+P+  +   ++    +       + +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC- 174
           L+ M  K    DT   +L++ A  +   ++ A+ +  ++   G  A+   Y   +   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 175 --EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
              +G +EE   LM EM      P   TFN LI    +    E       QM      P 
Sbjct: 229 AKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I  +C+ G+ + AN +L      G  PN + Y+ ++ G       +E  +L  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM  K        +  L+   CQ G ++   +  + M SH  +P V  Y +++    ++G
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 353 NKAKALHLCEEMVSEGLKPST-SY------LCSAS 380
              +A+ L + M S G KP+T SY      LCSA 
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 107/228 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A  + + +   G   + +S+  ++  +  + R      +   M++    PN  T  
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G ++  +++L ++    CSP +I  +++I  + +  + EE + LL  M+ K
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +TI YS I  A  +   +   + +++ +      +++ +Y   I + C+  + + A
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRA 585

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
                 M + G  P + T+ +LI+G A     +E+     ++ SR  L
Sbjct: 586 IDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 178/398 (44%), Gaps = 46/398 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ ++ +I  + K  R+     ++  M E   +P+  T  ++I   C  G+      +L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ SP V+   +LI   ++E +  E   L   ML + +I +TI Y+ ++    K 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++  M  +G S + F +TT I  YC   +I++   L+ EM   GL     T+
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 433

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT---- 257
           N LI G      +  +L   +QM+S  + P     N ++  LC+ G  K A  M      
Sbjct: 434 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493

Query: 258 --LALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             + LD      G  P+ +TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 494 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-----------GIHL---------- 349
             LC+  +L+EA + F  M S S  P V  + +L+           G+ L          
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 350 --------------EKGNKAKALHLCEEMVSEGLKPST 373
                         + GN   AL + +EM+S G+ P T
Sbjct: 614 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 170/360 (47%), Gaps = 11/360 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S  ++++N LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 377

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              DM   +  K CSP V   T+LI      +RI++GM LL  M R+ ++ +T+ Y+ ++
Sbjct: 378 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + ++M+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 497

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P   T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 498 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 558 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 617

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI    + G +  A   F+ M S  + P      +++     K    +A+ + E++
Sbjct: 618 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 158/348 (45%), Gaps = 1/348 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +++F TL+H +   DR       +  M E    PN  T  TL++ LC+ G++   
Sbjct: 144 GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYSLIVY 136
           V +LDR+      P  I   +++  + ++      + LL++M    ++I + + YS I+ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           +  K      A  ++ EM ++G   + F Y + I  +C  G+  +A  L+QEM    + P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI    K  +  E+    ++M+ R ++P+   +N MI   C+      A  M 
Sbjct: 324 DVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMF 383

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            L   KG SP+  T++ LI GY     I + ++L +EM  + +      Y +LI   C  
Sbjct: 384 YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLV 443

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           G L  A    + M S  + P +    +L+    + G    AL + + M
Sbjct: 444 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 175/416 (42%), Gaps = 50/416 (12%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEA 59
           R+ E    + R +E  G   + I++ T++  + K         + + M E + +  PN  
Sbjct: 199 RIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVV 256

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I +LCK G+     ++   +  K   P +    S+I+      R  +   LL+ M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + Y+ ++ A VK      A  +Y+EML RG   N+  Y + I  +C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           + A  +   M   G  P   TF  LI+G   AKRI++ +    +M  R L+ +   +N +
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436

Query: 240 IRRLCECGNAKQA----------------------------NGMLTLALD---------- 261
           I   C  G+   A                            NG L  AL+          
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496

Query: 262 --------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                    G  P+ +TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I  L
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+  +L+EA + F  M S S  P V  + +L+  + + G     L L  EM   G+
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 612



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 1/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F  L+ VV + +R DLV  +YQ M       +  +   LI   C   +L   +   
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTF 137

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P V+  T+L+  +  E+R+ E +    +M       + + ++ ++    + 
Sbjct: 138 GKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-LKPYDET 200
             +  A+ + + M++ G       Y T +   C+ G    A  L+++ME    + P    
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I+   K  R  ++ +   +M  + + P    +N MI   C  G    A  +L   L
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  SP+ +TY+ LI  + KEG+  E  +LY EM  + I P    Y S+I   C+  +L+
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 377

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            A+  F +M +    P V  + +L+  +         + L  EM   GL  +T
Sbjct: 378 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 1/301 (0%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  +D+   +   R  P V+    L+  +++ ER +  + L ++M RK +  D  ++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        L  AL  + ++ K G   +   +TT +   C   ++ EA     +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   TF  L+ G  +  RI E+++  ++MM   L P+   +  ++  +C+ G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +L  +       PN + YS +I    K+G   +   L+ EM+ K I P L  Y S+I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G+  +A++  + M    + P V  Y +L+   +++G   +A  L +EM+  G+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359

Query: 373 T 373
           T
Sbjct: 360 T 360



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/303 (20%), Positives = 128/303 (42%), Gaps = 11/303 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A D+   +  +G S  + +F TLI     + R D    +   M       N  T  T
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C  G L   +D+  ++      P ++   +L+  +    ++++ + + K M +  
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 124 MI-----------HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           M             D + Y++++   +       A  +YEEM  RG   ++  Y++ I  
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+  +++EA  +   M +    P   TFN LI G  KA R+++ L    +M  R ++  
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I    + GN   A  +    +  G  P+ IT  +++ G+  + E++  + +  
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 675

Query: 293 EME 295
           +++
Sbjct: 676 DLQ 678


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 173/352 (49%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F+ L+  + K ++ DLV  + + M       N  T   LI+  C+  QL   + +L
Sbjct: 80  SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++   SL+       RI + + L+ +M+      D+  ++ +++   + 
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + + M+ +G   +   Y   +   C+ G I+ A  L+++ME   ++P    +
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+     K + ++L+   +M ++ + P+   +N +IR LC  G    A+ +L+  ++
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +  +PN +T+S LI  + KEG++ E  KLY EM  +SI P +  Y+SLI+  C   +L+E
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A   F++M S    P V  Y +L+    +     + + L  EM   GL  +T
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 170/362 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  + + +EQ      ++ +NT+I  +      +    ++  M      PN  T  +L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G+      +L  +  ++ +P V+  ++LI   ++E ++ E   L   M+++++
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   YS ++        L+ A  ++E M+ +    N   Y T I  +C+  +++E   
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM   GL     T+  LI G  +A+  + +    +QM+S  +LP    ++ ++  LC
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A  +          P+  TY+ +I G  K G++++   L+  +  K + P + 
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT+++S  C+ G  EEAD  F+ MK    +P    Y +L+  HL  G+KA +  L  EM
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597

Query: 365 VS 366
            S
Sbjct: 598 RS 599



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 168/367 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+   +++ N+L++     +R      +   M+E    P+  T  TLI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L +  +    V ++DR+  K C P ++    ++  + +   I+  + LLK+M +  + 
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + Y+ I+ A    +N+  AL ++ EM  +G   N   Y + I   C YG+  +A+ L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M    + P   TF+ LI+   K  ++ E+    ++M+ R + P    ++ +I   C 
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  M  L + K   PN +TY+ LI G+ K   + E ++L+ EM  + +      
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT+LI    Q  + + A   FK M S  ++P +  Y  L+      G    AL + E + 
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493

Query: 366 SEGLKPS 372
              ++P 
Sbjct: 494 RSKMEPD 500



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 167/372 (44%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F++   +   ++  G S +L +++ LI+   +  +  L   +   M++    P+  T
Sbjct: 94  MNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 153

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++ ++      P      +LI  + +  R  E + L+ RM+
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    D + Y ++V    K  +++ AL + ++M +        +Y T I A C Y  + 
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  EM+N G++P   T+N LI       R  ++      M+ RK+ P+   F+ +I
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TYS LI G+     + E   ++  M  K   
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI   C+  +++E  + F+ M    LV     Y +L+    +      A  +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P 
Sbjct: 454 FKQMVSDGVLPD 465



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 136/300 (45%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   V++   +   R  P ++  + L+  I +  + +  + L ++M    + H+   YS
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL V  +M+K G+  +     + +  +C   +I +A  L+ +M   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   TFN LI G  +  R  E+++  ++M+ +   P    +  ++  LC+ G+   A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L         P  + Y+ +I        + + L L+ EM+ K I P +  Y SLI  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  G+  +A +    M    + P V  + +L+   +++G   +A  L +EM+   + P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 122/270 (45%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + + ++++ + L   M++       + +S ++ A  KM   +  + + E+M   G S N 
Sbjct: 57  LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y+  I  +C   ++  A  ++ +M   G +P   T N L+ G     RI +++S   Q
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P    FN +I  L     A +A  ++   + KG  P+ +TY  ++ G  K G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           I   L L  +ME   I P +  Y ++I +LC    + +A   F  M +  + P V  Y S
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L+      G  + A  L  +M+   + P+ 
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNV 326


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 163/333 (48%), Gaps = 1/333 (0%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           R+ + M++     +EA   T++S  C  G L +     D +  K  +   +  T++I  +
Sbjct: 347 RVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGL 406

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +   +EE   LL+ M  + +  D + Y++++    K   +  A  ++  M++RG + N 
Sbjct: 407 CRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNV 466

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             YT      C+ G ++ AN L+ EM N GL+    T+N LI G  KA  +E+++     
Sbjct: 467 VTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMAD 526

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M +  L P    +  +I  LC+ G+  +A+ +L   LDKG  P  +TY+ L+ G+   G 
Sbjct: 527 MDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGR 586

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           ++   KL   M  K+I P    Y SL+   C    ++   + +K M+S  + P  + Y  
Sbjct: 587 VEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNI 646

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLK-PSTSY 375
           L+  H +  N  +AL+  +EM+ +G +  +TSY
Sbjct: 647 LIKGHCKARNMKEALYFHDEMIQKGFRLTATSY 679



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 170/352 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++G +   +++ T+I+ + ++   +   ++ Q M       +E T   LI   CK G+
Sbjct: 387 MQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGK 446

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     M + +  +  +P V+  T+L   + ++  ++    LL  M  K +  +   Y+ 
Sbjct: 447 MAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 506

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   LE A+    +M       + + YTT I A C+ G ++ A+ L+QEM + G
Sbjct: 507 LINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG 566

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+N+L+ G   + R+E      + M+ + + P+ + +N ++++ C   N K   
Sbjct: 567 IKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTT 626

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +   PNE TY+ LI G+ K   ++E L  + EM  K    T  +Y++LI  L
Sbjct: 627 EIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLL 686

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            +  K  EA + F  M+   L    D+Y+  + ++  + N    L LC+E+V
Sbjct: 687 NKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELV 738



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 3/350 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N L+  +  + R     +++  M      P+  T   LI   C  G+L+  V +LD +
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEM 317

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P   V TS++  +  +  I + + +++ M+++ +I D   Y+ ++       +L
Sbjct: 318 VAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDL 377

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            SA   ++EM ++G + +   YTT I   C   ++EEA  L+QEM    L   + T+ +L
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVL 437

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K  ++ E+      M+ R + P+   +  +   LC+ G+ + AN +L    +KG 
Sbjct: 438 IDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL 497

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             N  TY+ LI G  K G +++ ++   +M+   + P +  YT+LI +LC+ G L+ A  
Sbjct: 498 ELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + M    + P +  Y  L+      G       L + M+ + + P+ +
Sbjct: 558 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAA 607



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 37/264 (14%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A ++   +  +G  L+  ++N+LI+ + K+   +   R    M      P+  T  TL
Sbjct: 483 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTL 542

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I ALCK G L     +L  +  K   P ++    L+       R+E G  LL  ML KN 
Sbjct: 543 IDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKN- 601

Query: 125 IHDTIA------------------------------------YSLIVYAKVKMRNLESAL 148
           IH   A                                    Y++++    K RN++ AL
Sbjct: 602 IHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEAL 661

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
             ++EM+++GF   +  Y+  I    +  K  EA  L  +M   GL    + ++  I+  
Sbjct: 662 YFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLN 721

Query: 209 AKAKRIEESLSYCEQMMSRKLLPS 232
                +E +L+ C++++   ++ S
Sbjct: 722 FNEDNLESTLALCDELVEASIVKS 745


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 166/341 (48%), Gaps = 2/341 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLI 65
           A ++ R ++ +G      +F+ LI     + + D   ++Y+ +L +  + P+  T   LI
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALI 191

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK G L+  + ML  + G++C P V+  +SL+  + +   +++ + L +RM  K  +
Sbjct: 192 DGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV 251

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + + Y+ +++       +++A ++ +EM       ++  Y   +  YC  G+IEEA  L
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRLC 244
            +EM      P   T+  L+ G   A R+EE+    E M  +  + P    ++ ++    
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 371

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                 +A   +   + +  +PN +TYS LI G  K G +   +++   M  K + P++ 
Sbjct: 372 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVG 431

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            + S+I +LC+ G ++EA K    M +H L PG+  Y +L+
Sbjct: 432 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 472



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 172/374 (45%), Gaps = 8/374 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +E R    +++++++L+H + K+   D    +++ M      PN  T  T
Sbjct: 200 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 259

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC   ++     ++D +    C P  +   +L+    +  RIEE   L K M  K+
Sbjct: 260 LIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            + D I Y+ +V        LE A  + E M    G   +   Y+  +  Y    +  EA
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
              +QEM    + P   T++ LI+G  KA R++ ++   + M+++++ PS   FN +I  
Sbjct: 380 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGA 439

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G+  +A  +L      G  P  +TY+ L+ G+++ G ++   +L+  M  K+   +
Sbjct: 440 LCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSS 499

Query: 303 -----LP--AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
                +P  A+++LI  LC+  ++++A    + ++S    P  +   ++V   L  G   
Sbjct: 500 SAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTE 559

Query: 356 KALHLCEEMVSEGL 369
           +A  L   +   GL
Sbjct: 560 EAGKLINSISKVGL 573



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 5/326 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T   +I   CK  QL+  +   +++  +  +P       ++  + +     +   +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 116 LKRMLR-KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAY 173
           LK M   K++  D + YS ++    K   ++ A  +  EM+ R G + +   YT+ +   
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS-YCEQMMSRKLLPS 232
           C  GK++ A  +++EM+  G++P   TF+ LI G   A++++E+L  Y E + S    P 
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I   C+ GN ++A  ML +   +   PN +TYS L+ G  K G++ + L L+ 
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            M  K   P +  YT+LI  LC   K++ A      M +    P    Y +L+  +   G
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303

Query: 353 NKAKALHLCEEMVSEGLKPS-TSYLC 377
              +A  L +EM ++   P   +Y C
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTC 329



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 95/181 (52%), Gaps = 4/181 (2%)

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   T+ ++I+G  KA +++++L+ C + M   + P+   +N ++  LC+     +A  
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALA-CFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 255 MLTLALD-KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLISS 312
           +L    D K  +P+ +TYS +I G+ K+GE+    ++  EM  +  I+P +  YTS++  
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE-MVSEGLKP 371
           LC+ GK++ A +  + MK   + P    + +L+          +AL L +E + S   KP
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 372 S 372
            
Sbjct: 183 D 183



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 101/223 (45%), Gaps = 7/223 (3%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E  F +       G    +++++ ++   +++ R        Q M+     PN  T 
Sbjct: 339 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 398

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI  LCK G++   +++L  +  KR  P V    S+I  + +   ++E   LL  M  
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 458

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF-------VYTTFIGAYC 174
             +    + Y+ ++    +   +E A  ++E M K+   ++S         ++  I   C
Sbjct: 459 HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLC 518

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           +  +I++A  +++E+ +   +P +E    +++G  +A R EE+
Sbjct: 519 KAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 561


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 173/353 (49%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +  S   I++ TLI    +  +      ++  M+     P+E T  TLI   CK G++  
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + + +     +P ++   +LI  + +   ++    LL  M +K +  +   Y+ +V 
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K  N+E A+ + +EM   G   ++  YTT I AYC  G I++A+ L+QEM + GL+P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TFN+L+ G      +E+       M+ + ++P    +N ++++ C   +      + 
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               ++G +P+  TY+ LI G+ K   ++E   LY EM  K   PT+ +Y +LI    + 
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            K+ EA + F+ M+ H LV   +IY   V +  E+G+    L+LC+E + + L
Sbjct: 692 KKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCL 744



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 173/369 (46%), Gaps = 5/369 (1%)

Query: 5   EVAFDV-CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           E+A  V C Y    G S +  S+N +I+ + +  +     R+   M      P+  +  T
Sbjct: 243 EMAIKVFCEY----GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C  G+L+  + ++D +  K   P      S+IL + +  +  E   +L+ M+ + 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +I D + Y+ +++   K+ ++ +A   ++EML +  S +   YTT I  + + GK+ E  
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM + GLKP + T+  LI+   KA  +  + S   +M+   + P+   +  +I  L
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G    AN +L     KG   N   Y+ ++ G  K G I++ +KL  EME   I P  
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDA 538

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT++I + C+ G +++A K  + M    L P V  +  L+      G       L   
Sbjct: 539 ITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598

Query: 364 MVSEGLKPS 372
           M+ +G+ P 
Sbjct: 599 MLEKGIVPD 607



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 174/363 (47%), Gaps = 1/363 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   +  ++N++I ++ K  ++    ++ + M+     P+     TLI    K G 
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++T     D +  K+ SP  I  T+LI    Q  ++ E   L   M+ + +  D + Y+ 
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   + +A  ++ EM++ G + N   Y   I   C++G+++ AN L+ EM   G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+     +N ++ G  KA  IE+++   ++M    + P    +  +I   C  G+  +A+
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   LD+G  P  +T++ L+ G+   G +++  +L   M  K I P    Y +L+   
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
           C    +    K +K M++  + P  + Y  L+  H +  N  +A  L +EM+ +G  P+ 
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678

Query: 373 TSY 375
           TSY
Sbjct: 679 TSY 681



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 157/346 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           + + TLIH   K        + +  ML     P+  T  TLI    +GG++    ++   
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +   P  +  T+LI    +   +     L   M++  M  + + Y  ++    K   
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L++A  + +EM K+G   N  +Y + +   C+ G IE+A  LM+EME AG+ P   T+  
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+   +   I+++    ++M+ R L P+   FN ++   C  G  +  + +L   L+KG
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ ITY+ L+  +     +    K+Y  M  + ++P    Y  LI   C+   L+EA 
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             +K M     VP V  Y +L+    +K    +A  L EEM   GL
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGL 709



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 3/229 (1%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E A+ V+ E    G S N+  Y   I + C  GK++EA+ L+ +M+     P   +++ 
Sbjct: 242 IEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G      ++++L   + M  + L P+   +N +I  LC+ G + +A  +L   + + 
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ + Y+ LI G+ K G ++   K + EM  K ISP    YT+LI    Q GK+ E  
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F  M S  L P    Y +L+ ++ + G    A  L  EMV  G+ P+
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPN 467



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 103/226 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + + +E  G     I++ T+I    +    D   ++ Q ML+    P   T   L
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++  C  G L+    +L  +  K   P  I   +L+ +      +     + KRM  + +
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D+  Y++++    K RNL+ A  +Y+EM+++G+      Y   I  + +  KI EA  
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARE 699

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           L +EM   GL    E +N  ++ C +   +E +L+ C++ + + LL
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLL 745


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 182/361 (50%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F +  D C+ LE  G + ++ + N +I+   +  +    + +   +++    P+  T  T
Sbjct: 94  FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 153

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L   G++   V ++DR+    C P V+   S++  I +       + LL++M  +N
Sbjct: 154 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 213

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS I+ +  +   +++A+ +++EM  +G  ++   Y + +   C+ GK  +  
Sbjct: 214 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 273

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M +  + P   TFN+L++   K  +++E+    ++M++R + P+   +N ++   
Sbjct: 274 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 333

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +AN ML L +    SP+ +T++ LI GY     + + +K++  +  + +    
Sbjct: 334 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 393

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ L+   CQ GK++ A++ F+ M SH ++P V  Y  L+    + G   KAL + E+
Sbjct: 394 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 453

Query: 364 M 364
           +
Sbjct: 454 L 454



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 177/357 (49%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G    ++++N++++ + +S    L   + + M E     +  T  T+I +LC+ G + 
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +   +  K     V+   SL+  + +  +  +G +LLK M+ + ++ + I +++++
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              VK   L+ A  +Y+EM+ RG S N   Y T +  YC   ++ EAN ++  M      
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TF  LI+G    KR+++ +     +  R L+ +   ++ +++  C+ G  K A  +
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  P+ +TY  L+ G    G++++ L+++ +++   +   +  YT++I  +C+
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 475

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK+E+A   F  +    + P V  Y  ++    +KG+ ++A  L  +M  +G  P+
Sbjct: 476 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 532



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 164/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SL+ F+     + ++ + +LV    + +  N    N  T+  +I+  C+  +      +L
Sbjct: 77  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 136

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P      +LI  +  E ++ E +VL+ RM+      D + Y+ IV    + 
Sbjct: 137 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 196

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +   AL +  +M +R   A+ F Y+T I + C  G I+ A  L +EME  G+K    T+
Sbjct: 197 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 256

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L+ G  KA +  +     + M+SR+++P+   FN ++    + G  ++AN +    + 
Sbjct: 257 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 316

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G SPN ITY+ L+ GY  +  + E   +   M     SP +  +TSLI   C   ++++
Sbjct: 317 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 376

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             K F+ +    LV     Y  LV    + G    A  L +EMVS G+ P 
Sbjct: 377 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 427



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 158/328 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  + + +E +G   S++++N+L+  + K+ + +    + + M+     PN  T   
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+    K G+LQ   ++   +  +  SP +I   +L+     + R+ E   +L  M+R  
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + ++ ++     ++ ++  + V+  + KRG  AN+  Y+  +  +C+ GKI+ A 
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L QEM + G+ P   T+ +L++G     ++E++L   E +   K+      +  +I  +
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  + A  +      KG  PN +TY+ +I G  K+G + E   L  +ME    +P  
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 533

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKS 331
             Y +LI +  + G L  + K  + MKS
Sbjct: 534 CTYNTLIRAHLRDGDLTASAKLIEEMKS 561



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 122/263 (46%)

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           ++ + L + M+R   +   + +S    A  + +     L   +++   G + N +     
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  +C   K   A  ++ ++   G +P   TFN LI+G     ++ E++   ++M+    
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P    +N ++  +C  G+   A  +L    ++    +  TYS +I    ++G I   + 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L+ EME K I  ++  Y SL+  LC+ GK  +     K M S  +VP V  +  L+ + +
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           ++G   +A  L +EM++ G+ P+
Sbjct: 300 KEGKLQEANELYKEMITRGISPN 322



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 86/195 (44%)

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           K ++A  L QEM  +   P    F+      A+ K+    L +C+Q+    +  +    N
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            MI   C C     A  +L   +  G+ P+  T++ LI G   EG++ E + L   M   
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
              P +  Y S+++ +C+ G    A    + M+  ++   V  Y +++      G    A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 358 LHLCEEMVSEGLKPS 372
           + L +EM ++G+K S
Sbjct: 238 ISLFKEMETKGIKSS 252



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 46/273 (16%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R + +RG   + ++++ L+    +S +  L   ++Q M+ +   P+  T   L+  LC
Sbjct: 380 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 439

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G+L+  ++                    I   +Q+ +++ G+V+              
Sbjct: 440 DNGKLEKALE--------------------IFEDLQKSKMDLGIVM-------------- 465

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ I+    K   +E A  ++  +  +G   N   YT  I   C+ G + EAN L+++M
Sbjct: 466 -YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524

Query: 190 ENAGLKPYDETFNLLIEG-------CAKAKRIEE--SLSYCEQMMSRKLLPS--CSAFNE 238
           E  G  P D T+N LI          A AK IEE  S  +     S K++     SA   
Sbjct: 525 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 584

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           +  R C    +K    +L L+  +    + +T+
Sbjct: 585 LTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTF 617



 Score = 42.0 bits (97), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 4/64 (6%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +++EM++RG + N+  Y++ I  +C+  +++EAN ++  M   G    D     L+ G  
Sbjct: 721 LHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG----DSDIRYLLAGLM 776

Query: 210 KAKR 213
           + KR
Sbjct: 777 RKKR 780


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 179/394 (45%), Gaps = 37/394 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG ++ L+ + T++  + K  + +    + +H L +   PN  T   L+ A C+ G + 
Sbjct: 357 SRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNID 416

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               ML ++  K  SP V+  +S++  +++   I +    +++M    +  + + Y  ++
Sbjct: 417 GAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLI 476

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K +  E+AL VY +ML  G  AN+F+  + +    + G IEEA  L ++M   GL 
Sbjct: 477 DGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLL 536

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +  L++G  K   +  +L   +++M R L P    +N  I  LC  G   +A   
Sbjct: 537 LDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSF 596

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L    + G  P++ TY+ +I    +EG   + LKL  EM++ SI P L  YT+L+  L +
Sbjct: 597 LKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLE 656

Query: 316 CGKLEEADKY------------------------------FKIMKSHSLVPG------VD 339
            G +E+A KY                              + I++ H L+ G      + 
Sbjct: 657 AGVVEKA-KYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADIT 715

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +Y +LV +    G   KA  + +EM+  G+ P T
Sbjct: 716 VYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDT 749



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 171/374 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V + L +R  S   + +N  I+ + +  +        + M      P++AT  T+IS
Sbjct: 558 ALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMIS 617

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C+ G     + +L+ +      P +I  T+L++ +++   +E+   LL  M       
Sbjct: 618 AQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTP 677

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y  ++ A    R+    L V+E M+  G  A+  VY T +   C +G   +A  ++
Sbjct: 678 TPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVL 737

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+ P   TFN LI G  K+  ++ + +   QM+ + L P+ + FN ++  L   
Sbjct: 738 DEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESA 797

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A+ ++      G  PN +TY  L+ GYAK+    E L+LY EM  K   P    Y
Sbjct: 798 GRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 857

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLIS   + G + +A + F  MK   ++     Y+ L+    +  N  +   L ++M  
Sbjct: 858 NSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKE 917

Query: 367 EGLKPSTSYLCSAS 380
            G KPS   + S S
Sbjct: 918 LGFKPSKGTISSMS 931



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 168/370 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A DV R +   G   +    ++L++ + K+   +    +++ M E     +     TL
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  L K G +   + +   +  +  SP  +V    I  + +  +  E    LK M    +
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ ++ A+ +  N   AL +  EM       N   YTT +    E G +E+A  
Sbjct: 606 EPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKY 665

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM +AG  P   T+  +++ C+ ++     L   E MM   L    + +N ++  LC
Sbjct: 666 LLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLC 725

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  ++A  +L   L +G +P+ IT++ LI G+ K   +      Y +M ++ +SP + 
Sbjct: 726 CHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIA 785

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + +L+  L   G++ EAD     MK   L P    Y+ LV  + +K NK +AL L  EM
Sbjct: 786 TFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 845

Query: 365 VSEGLKPSTS 374
           VS+G  P  S
Sbjct: 846 VSKGFIPKAS 855



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 190/403 (47%), Gaps = 35/403 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A++V   ++  G   S+++  TLI    K  R +  + +Y+ M+ +   P+  T+  L
Sbjct: 241 DAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSAL 300

Query: 65  ISALCKGGQLQ----------------------TYVDMLDRIH---------GKRCSPMV 93
           +  LC+ G+                        T++D L ++          G+  S  V
Sbjct: 301 VDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGV 360

Query: 94  IVN----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
            ++    T+++ R+ +E +IEE   +L+  L  N+  + + Y+++V A  +  N++ A  
Sbjct: 361 AMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQ 420

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +  +M ++  S N   +++ +    + G I +A   M++M+++G+ P   T+  LI+G  
Sbjct: 421 MLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFF 480

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K +  E +L     M+   +  +    + ++  L + GN ++A  +     ++G   + +
Sbjct: 481 KCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHV 540

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+ L+ G  K G +   LK+  E+  +++SP    Y   I+ LC+ GK  EA  + K M
Sbjct: 541 NYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEM 600

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++  L P    Y +++     +GN +KAL L  EM    +KP+
Sbjct: 601 RNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 172/365 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +  +G SL ++ +NTL+     S   D  W + + M  +   P+  T  TLI 
Sbjct: 208 ALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK  +++    + + +      P V+  ++L+  + ++ R  E   L + M +  +  
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y   + +  K++ +  +L +  EM+ RG + +  +YTT +    + GKIEEA  ++
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +   +  + P   T+ +L++   +A  I+ +     QM  + + P+   F+ ++  L + 
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A G +    D G +PN +TY  LI G+ K    +  L +Y +M ++ +       
Sbjct: 448 GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIV 507

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SL++ L + G +EEA+  FK M    L+     Y +L+    + GN   AL + +E++ 
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELME 567

Query: 367 EGLKP 371
             L P
Sbjct: 568 RNLSP 572



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 149/307 (48%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK   +   + +++R+  +  S  V+   +L+         +    + +RM    
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + ++ ++    KM+ +E A  +YE M++ G   +    +  +   C  G+  EA 
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L +EM+  G+ P   T+   I+  AK +R+ ESL    +M+SR +      +  ++ RL
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A  +L  AL    +PN +TY+ L+  + + G I    ++  +ME KS+SP +
Sbjct: 375 GKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNV 434

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             ++S+++ L + G + +A  Y + MK   + P V  Y +L+    +   +  AL +  +
Sbjct: 435 VTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRD 494

Query: 364 MVSEGLK 370
           M+ EG++
Sbjct: 495 MLHEGVE 501



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 152/363 (41%), Gaps = 39/363 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A    + +   G      ++NT+I    +        ++   M  +   PN  T  T
Sbjct: 590 FSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTT 649

Query: 64  LISALCKGGQLQ-------------------TYVDMLDRIHGKRCSPMVI---------- 94
           L+  L + G ++                   TY  +L    G R SP VI          
Sbjct: 650 LVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSR-SPYVILEVHELMMGA 708

Query: 95  -------VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
                  V  +L+  +       +  ++L  ML + +  DTI ++ ++    K  +L++A
Sbjct: 709 GLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNA 768

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
              Y +ML +G S N   + T +G     G+I EA+ ++ EM+  GL+P + T+++L+ G
Sbjct: 769 FATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTG 828

Query: 208 CAKAKRIEESLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
            AK     E+L  YCE M+S+  +P  S +N +I    + G   QA  + +    +G   
Sbjct: 829 YAKKSNKVEALRLYCE-MVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLH 887

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
              TY  L+ G++K     EV  L  +M+     P+    +S+  +  + G   EA +  
Sbjct: 888 TSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLL 947

Query: 327 KIM 329
           K +
Sbjct: 948 KTL 950



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 138/328 (42%), Gaps = 11/328 (3%)

Query: 47  QHMLENIRYPNEATI-RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
            H++ ++  P  A + R LI AL   G     V    R       P+ +   S+IL    
Sbjct: 39  SHVVSSLPAPPPARLLRRLIPALASSG----LVAAASRFRPVPGDPLTL--NSIILSYCS 92

Query: 106 EERIEEGMVLLKRM--LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
              +   + LL+     +  +  DT++Y++ +    +  +   A  V  EM KRG   + 
Sbjct: 93  LHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDG 152

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDET-FNLLIEGCAKAKRIEESLSYC 221
              +T +      G + EA  L + +    G+       +N LI+G  K + +  +L+  
Sbjct: 153 VTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVV 212

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           E+M ++ L      +N ++      G+A  A  +       G  P+ +T++ LIG Y K 
Sbjct: 213 ERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKM 272

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             I+E   LY  M    + P +   ++L+  LC+ G+  EA   F+ M    + P    Y
Sbjct: 273 KRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTY 332

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            + +    +     ++L L  EMVS G+
Sbjct: 333 CTFIDSLAKVQRVNESLGLLGEMVSRGV 360


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 164/366 (44%), Gaps = 35/366 (9%)

Query: 42  VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
            WR++  M      PN  T   LIS LC  G L+  + +  R+      P  +   +LI 
Sbjct: 509 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            +++  RI+   V+L  M R  +  + + Y+ ++     + + + A++V   ML+RG SA
Sbjct: 569 ILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 628

Query: 162 NSFVYTTFIGAYCEYG-----------------------------------KIEEANCLM 186
           N   Y T I  YC+ G                                   K+E A  L 
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + GL P + T+  LI+G  K ++++ + S  E M      P+   +N +I  L + 
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N   A  +  + +++G  PN +TY+ +I G  K G     L+++ +M  +   P L  Y
Sbjct: 749 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +SLI +L Q GK+EEA+  F  ++ H L+P    Y  ++  ++  G    A +    M+ 
Sbjct: 809 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 868

Query: 367 EGLKPS 372
            G +P+
Sbjct: 869 AGCQPT 874



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 156/343 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L +VA  +   + + G   + +++N LI+++ ++ R    + +   M  N  + N  T  
Sbjct: 540 LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYN 599

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +I   C  G  +  + +++ +  +  S  ++   ++I            + +L  M   
Sbjct: 600 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 659

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D  +Y+ ++    K+  +ESA  ++ EM+  G   N   YT  I  YC+  K++ A
Sbjct: 660 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 719

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++ M+ +G +P  +T+N+LI G  K      +   C+ M+   + P+   +  MI  
Sbjct: 720 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 779

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+   A  M    +++G  PN +TYS LI    +EG+++E   L+ E+E   + P 
Sbjct: 780 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 839

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              Y  +I +    GK+E A  +   M      P +  Y  L+
Sbjct: 840 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 153/355 (43%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +L+ +N +I+ + K         I + + E+   P+  T  ++I   C+   L + 
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + +++  + C P  +  ++LI  +    R+ E   L++ M+   ++      +  + A
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              M   E A  ++ +M  +G   N + YT  I   C  G ++ A  L   M   G+ P 
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI    + +RI+ +      M    L  +   +NEMI+  C  G+ K+A  ++ 
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L +G S N +TY+ +I GY   G     L++   M      P   +YT LI   C+  
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K+E A   F  M    L P    Y +L+  + +      A  L E M   G +P+
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 107/246 (43%)

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           +E +   M  L  + +  +     AYS ++    ++    + +  Y  ML  G   N  +
Sbjct: 328 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 387

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   I A C+ G + +A  +M+++  + + P   T+  +I G  +   ++ +L    QM 
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 447

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                P+   ++ +I  LC+ G   +A  ++   +  G  P   T +  I      G  +
Sbjct: 448 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 507

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +  +L+ +M+ K   P +  YT+LIS LC  G L+ A   F  M    + P    Y +L+
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567

Query: 346 GIHLEK 351
            I +E 
Sbjct: 568 NILVEN 573



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/332 (18%), Positives = 132/332 (39%), Gaps = 28/332 (8%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            F  A ++C+ + + G   +++++  +I  + K+    L   ++  M+E    PN  T  +
Sbjct: 751  FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 810

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            LI AL + G+++   ++   +      P  I    +I   I   ++E     L RM++  
Sbjct: 811  LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 870

Query: 124  MIHDTIAYSLIVYA--------------------------KVKMRNLESALVVYEEMLKR 157
                   Y +++                            +   ++  S +      L  
Sbjct: 871  CQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDP 930

Query: 158  GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
            G S    V    +      G+  EAN L+  M + GL P  E +N L+    + + ++ +
Sbjct: 931  GLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 988

Query: 218  LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
            +   + M ++      + + E+I  LC+    K+A       L + ++P+++  + LI G
Sbjct: 989  MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 1048

Query: 278  YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
              ++G     ++  + ME +   P+   YT L
Sbjct: 1049 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 6/181 (3%)

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+ C   + +  ++S+ + +    L     A++ ++  L   G            L +G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN + Y+ +I    K+G + +   +  ++    +SP    YTS+I   C+   L+ A 
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCR 383
           + F  M      P    Y +L+    + G   +A  L  EM+  G+ P      +A TC 
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILP------TAHTCT 494

Query: 384 G 384
           G
Sbjct: 495 G 495



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 69/149 (46%)

Query: 93   VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
            V V  +L+  +    R  E   LL  M+ + +  D  AY+ ++ + +++RN++ A+ V++
Sbjct: 934  VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 993

Query: 153  EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
             M  +G   +   Y   I A C+  + +EA    + M      P D    +LI+G  +  
Sbjct: 994  HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053

Query: 213  RIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              +  + +   M +R+ +PS   +  + R
Sbjct: 1054 YKDLCMEFLHIMETRRYMPSFHIYTILAR 1082


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 173/349 (49%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            S+N +I  + K+  +    +++  M E    PN  T  T+I    K G L++   +  +
Sbjct: 189 FSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQ 248

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P VI    L+  + +  R+ E   +L  M  + M+ D   YS++     +  +
Sbjct: 249 MLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGD 308

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            ++ L ++EE +K+G    ++  +  +   C+ GKI +A  ++Q + N+GL      +N 
Sbjct: 309 SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  +   +E + S  +QM SR + P    +N +I  L +     +A+ ++      G
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +P+  T++ LI  Y + G++++   +  +M+ K + P + +Y S++++ C+ GK+ EA 
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                M    ++PG  +Y +++  ++E G+  +A  L E+M S G+ PS
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPS 537



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 171/384 (44%), Gaps = 35/384 (9%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++NT+I    K    +  +R++  ML +   PN  T   L+S LC+ G++     +LD 
Sbjct: 224 ITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDE 283

Query: 84  IHGKRCSPMVIV------------NTSLILRIIQEE-----------------------R 108
           +  ++  P                ++  +L + +E                        +
Sbjct: 284 MASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGK 343

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I +   +L+ ++   ++  T+ Y+ ++    ++ +LE A  ++++M  R    +   Y  
Sbjct: 344 ISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNA 403

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I    +  +I EA+ L+ EME  G+ P  ETFN LI+   +A ++E+       M  + 
Sbjct: 404 LINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKG 463

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           L P+  ++  ++   C+ G   +A  +L     K   P    Y+ +I  Y + G   +  
Sbjct: 464 LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAF 523

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            L  +M+   + P++  Y  LI  LC+  ++ EA++    ++++ L P V  Y +L+   
Sbjct: 524 MLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISAC 583

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
             + N  +AL L +EM   G+KPS
Sbjct: 584 CYRSNTDRALELEKEMWKCGIKPS 607



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 165/355 (46%), Gaps = 2/355 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G  +   + + L++ + K  +      + Q ++ +          TLI+  C+ G L+
Sbjct: 321 KKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLE 380

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AYSLI 134
               +  ++  +   P  I   +LI  + + ERI E   L+  M  KN ++ ++  ++ +
Sbjct: 381 GAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM-EKNGVNPSVETFNTL 439

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           + A  +   LE   ++  +M ++G   N   Y + + A+C+ GKI EA  ++ +M    +
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDV 499

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P  + +N +I+   +    +++    E+M S  + PS   +N +I+ LC+     +A  
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L    + G +P+ I+Y+ LI            L+L  EM    I P+   Y  L SSL 
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLG 619

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             G++ E +  ++ M    +VP   IY  +V  + + G ++K   L +EM  +G+
Sbjct: 620 GAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 152/336 (45%), Gaps = 10/336 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V + L   G   + + +NTLI+   +    +  + I+Q M   +  P+  T   LI+
Sbjct: 347 AEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALIN 406

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  ++    D++  +     +P V    +LI    +  ++E+  ++L  M  K +  
Sbjct: 407 GLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKP 466

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + ++Y  IV A  K   +  A+ + ++M  +     + VY   I AY E G  ++A  L 
Sbjct: 467 NVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLA 526

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M+++G+ P   T+NLLI+G  K  +I E+    + + +  L P   ++N +I   C  
Sbjct: 527 EKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYR 586

Query: 247 GNAKQANGMLTLALDK-----GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            N  +A     L L+K     G  P+  TY  L       G + E+  LY +M  K + P
Sbjct: 587 SNTDRA-----LELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVP 641

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
               Y  ++ +  +CG+  + +   K M    +  G
Sbjct: 642 CSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVG 677



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 137/308 (44%), Gaps = 2/308 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF + + ++ R      I++N LI+ + K +R      +   M +N   P+  T  T
Sbjct: 379 LEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNT 438

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A  + GQL+    +L  +  K   P V+   S++    +  +I E + +L  M  K+
Sbjct: 439 LIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKD 498

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++     Y+ I+ A ++  + + A ++ E+M   G   +   Y   I   C+  +I EA 
Sbjct: 499 VLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAE 558

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  + N GL P   ++N LI  C      + +L   ++M    + PS   +  +   L
Sbjct: 559 ELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSL 618

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G   +   +    LDK   P    Y+ ++  YAK GE  +V  L  EM  K I+  +
Sbjct: 619 GGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA--V 676

Query: 304 PAYTSLIS 311
             YTS+ +
Sbjct: 677 GDYTSMTN 684



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 1/128 (0%)

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK-SISPTLPA 305
           G      G   L +     P+  T++  +      G++ E + +   M    + +P   +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  +I+ L + G   +A K F  M   ++VP    Y +++  H++KG+      L  +M+
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 366 SEGLKPST 373
             GLKP+ 
Sbjct: 251 RHGLKPNV 258


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 178/353 (50%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLISALCKGGQLQTYVDM 80
           S+I F+ L+  + K ++ D+V  + + M +N+  P N  T   LI+  C+  QL   + +
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGMPHNHYTYSILINCFCRRSQLPLALAV 138

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++  +SL+      +RI E + L+ +M       +T+ ++ +++    
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A+ + + M+ +G   +   Y   +   C+ G  + A  L+ +ME   L+P    
Sbjct: 199 HNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLI 258

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +  +I+G  K K ++++L+  ++M ++ + P+   ++ +I  LC  G    A+ +L+  +
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  +P+  T+S LI  + KEG++ E  KLY EM  +SI P++  Y+SLI+  C   +L+
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA + F+ M S    P V  Y +L+    +     + + L  EM   GL  +T
Sbjct: 379 EAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 174/357 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    L+++  +++ + K    DL + +   M +    P      T+I  LCK   +  
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDD 274

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +++   +  K   P V+  +SLI  +    R  +   LL  M+ + +  D   +S ++ 
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A VK   L  A  +Y+EM+KR    +   Y++ I  +C + +++EA  + + M +    P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              +++ LI+G  KAKR++E +    +M  R L+ +   +  +I+ L + G+   A  + 
Sbjct: 395 DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIF 454

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +  G  PN +TY+ L+ G  K G++++ + ++  ++   + PT+  Y  +I  +C+ 
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           GK+E+    F  +    + P V  Y +++     KG+K +A  L +EM  +G  P++
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 172/367 (46%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+  ++++ ++L++    S R      +   M      PN  T  TLI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L    +    V ++DR+  K C P ++    ++  + +    +   +LL +M +  + 
Sbjct: 194 HGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE 253

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + Y+ I+    K ++++ AL +++EM  +G   N   Y++ I   C YG+  +A+ L
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M    + P   TF+ LI+   K  ++ E+    ++M+ R + PS   ++ +I   C 
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  M    + K   P+ ++YS LI G+ K   + E ++L+ EM  + +      
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT+LI  L Q G  + A + FK M S  + P +  Y +L+    + G   KA+ + E + 
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493

Query: 366 SEGLKPS 372
              ++P+
Sbjct: 494 RSKMEPT 500



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 170/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F+V   +   ++  G   +  +++ LI+   +  +  L   +   M++    PN  T
Sbjct: 94  MNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 153

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C   ++   V ++D++      P  +   +LI  +    +  E + L+ RM+
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 213

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    D + Y ++V    K  + + A ++  +M +        +YTT I   C+   ++
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMD 273

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L +EME  G++P   T++ LI       R  ++      M+ RK+ P    F+ +I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+ +TYS LI G+     + E  +++  M  K   
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P + +Y++LI   C+  +++E  + F+ M    LV     Y +L+    + G+   A  +
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 453

Query: 361 CEEMVSEGLKPS 372
            +EMVS+G+ P+
Sbjct: 454 FKEMVSDGVPPN 465



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 165/355 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  + ++FNTLIH +   ++      +   M+     P+  T   +++ LCK G     
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L+++   +  P V++ T++I  + + + +++ + L K M  K +  + + YS ++  
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                    A  +  +M++R  + + F ++  I A+ + GK+ EA  L  EM    + P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ LI G     R++E+    E M+S+   P   +++ +I+  C+     +   +  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +G   N +TY+ LI G  + G+     +++ EM    + P +  Y +L+  LC+ G
Sbjct: 421 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           KLE+A   F+ ++   + P +  Y  ++    + G       L   +  +G+KP 
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 141/300 (47%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   V +   +   R  P +I  + L+  I +  + +  + L ++M    M H+   YS
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL V  +M+K G+  N    ++ +  YC   +I EA  L+ +M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   TFN LI G     +  E+++  ++M+++   P    +  ++  LC+ G+   A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L         P  + Y+ +I G  K   + + L L+ EME K I P +  Y+SLIS 
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  G+  +A +    M    + P V  + +L+   +++G   +A  L +EMV   + PS
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 125/269 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + E ++++ + L   M++       I +S ++ A  KM   +  + + E+M   G   N 
Sbjct: 57  LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNH 116

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y+  I  +C   ++  A  ++ +M   G +P   T + L+ G   +KRI E+++  +Q
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M      P+   FN +I  L     A +A  ++   + KG  P+ +TY  ++ G  K G+
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
                 L  +ME   + P +  YT++I  LC+   +++A   FK M++  + P V  Y S
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSS 296

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+      G  + A  L  +M+   + P 
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPD 325



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 115/255 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R    S++++++LI+     DR D   ++++ M+    +P+  +  TLI   CK  ++ 
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  +      +  T+LI  + Q    +    + K M+   +  + + Y+ ++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   LE A+VV+E + +       + Y   I   C+ GK+E+   L   +   G+K
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N +I G  +    EE+ +  ++M     LP+   +N +IR     G+ + +  +
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593

Query: 256 LTLALDKGFSPNEIT 270
           +      GF+ +  T
Sbjct: 594 IKEMRSCGFAGDAST 608



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 93/193 (48%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + QRG   + +++ TLI  + ++   D+   I++ M+ +   PN  T  TL+  LCK 
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+L+  + + + +   +  P +     +I  + +  ++E+G  L   +  K +  D +AY
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    +  + E A  +++EM + G   NS  Y T I A    G  E +  L++EM +
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599

Query: 192 AGLKPYDETFNLL 204
            G      T  L+
Sbjct: 600 CGFAGDASTIGLV 612


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 174/370 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+ + +  ++E  G    + +++T +    K+   D   ++++ M       NE T   +
Sbjct: 227 ELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVM 286

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LC+ G ++      + +     SP      +L+  + +  R++E   LL  M    +
Sbjct: 287 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGL 346

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ +V   +K      A  +  EM+  G   N  +Y   I   C+ G++  A+ 
Sbjct: 347 KPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 406

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM   G +P   T++ L++G  +    + +     +M +  +LP+   +  MI  LC
Sbjct: 407 LLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLC 466

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G +K+A  +L   + +G  PN   Y+ LI G++KEG I    +    M   ++ P L 
Sbjct: 467 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLF 526

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y SLI  L   G++EEA++Y+  ++   LVP    Y  L+  + +  N  KA  L ++M
Sbjct: 527 CYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQM 586

Query: 365 VSEGLKPSTS 374
           ++ GLKP+  
Sbjct: 587 LNSGLKPNAD 596



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 157/334 (47%)

Query: 40  DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           D  + +   M  +   PN  T   +I+ LC+ G+ +   ++L+ +  +   P   +   L
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           I+   +E  I      L+ M + N++ D   Y+ ++     +  +E A   Y ++ KRG 
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGL 556

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + F Y+  I  YC+   +E+A+ L+Q+M N+GLKP  +T+  L+EG  K+   E+  S
Sbjct: 557 VPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSS 616

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             + M+     P    +  +IR L    N + A  +LT     G  P+   YS LI G  
Sbjct: 617 ILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 676

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K  ++++ + L  EM  + + P +  Y +LI   C+ G +  A   F  + +  L+P   
Sbjct: 677 KMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCV 736

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Y +L+  + + G+   A  L ++M+  G+ P  
Sbjct: 737 TYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDA 770



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 164/362 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +   G   +  ++  +I+ + ++  +     + + M+     PN      LI 
Sbjct: 439 AFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLII 498

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G +    + L+ +      P +    SLI  +    RIEE      ++ ++ ++ 
Sbjct: 499 GHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVP 558

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   YS +++   K RNLE A  + ++ML  G   N+  YT  +  Y +    E+ + ++
Sbjct: 559 DEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSIL 618

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           Q M  +G KP +  + ++I   ++++ +E +     ++    L+P    ++ +I  LC+ 
Sbjct: 619 QSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKM 678

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            + ++A G+L     +G  P  + Y+ LI G+ + G+I     ++  +  K + P    Y
Sbjct: 679 ADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTY 738

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+LI   C+ G + +A   +K M    + P   +Y  L     +  +  +AL L EEM +
Sbjct: 739 TALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFN 798

Query: 367 EG 368
            G
Sbjct: 799 RG 800



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 186/441 (42%), Gaps = 70/441 (15%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R F+ A  V   + +R  +++ +++N +I  + +S   +  +   + M++    P+  T 
Sbjct: 259 RDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTY 318

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L++ LCKGG+L+    +LD +      P V+V  +L+   ++E +  E   +L  M+ 
Sbjct: 319 GALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMIS 378

Query: 122 ----------KNMIH-------------------------DTIAYSLIVYAKVKMRNLES 146
                      N+I                          DT  Y  ++    +  + + 
Sbjct: 379 AGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDG 438

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP----YDET-- 200
           A  +  EM   G   N++ Y   I   C+ G+ +EA  L++EM + GLKP    Y     
Sbjct: 439 AFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLII 498

Query: 201 -----------------------------FNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
                                        +N LI+G +   RIEE+  Y  Q+  R L+P
Sbjct: 499 GHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVP 558

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
               ++ +I   C+  N ++A+ +L   L+ G  PN  TY+ L+ GY K  + ++V  + 
Sbjct: 559 DEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSIL 618

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
             M      P    Y  +I +L +   +E A      ++ + LVP + IY SL+    + 
Sbjct: 619 QSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKM 678

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
            +  KA+ L +EM  EGL+P 
Sbjct: 679 ADMEKAVGLLDEMAKEGLEPG 699



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 158/341 (46%), Gaps = 7/341 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            L  +N+LI  ++   R +     Y  + +    P+E T   LI   CK   L+    +L
Sbjct: 524 DLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLL 583

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P     T L+    +    E+   +L+ ML      D   Y +++    + 
Sbjct: 584 QQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 643

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+E A +V  E+ K G   +  +Y++ I   C+   +E+A  L+ EM   GL+P    +
Sbjct: 644 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCY 703

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G  ++  I  + +  + ++++ LLP+C  +  +I   C+ G+   A  +    LD
Sbjct: 704 NALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLD 763

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G +P+   Y+ L  G +   ++++ L L  EM  +  +  +  +++L+   C+ G+L+E
Sbjct: 764 RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQE 822

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
            +K   +M    +VP     E+++    E G   KA  LCE
Sbjct: 823 TEKLLHVMMDREIVPNAQTVENVI---TEFG---KAGKLCE 857



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 152/358 (42%), Gaps = 37/358 (10%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N L+  + ++D  +LVW++   M      P+  T  T + A CK                
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKA--------------- 258

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
                                  +    + + M R++   + + Y++++    +   +E 
Sbjct: 259 --------------------RDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A    EEM+  G S ++F Y   +   C+ G+++EA  L+ EM  +GLKP    +  L++
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K  +  E+     +M+S  + P+   ++ +IR LC+ G   +A+ +L   +  G  P
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +  TY  L+ G+ +  +     +L  EM    I P    Y  +I+ LCQ G+ +EA    
Sbjct: 419 DTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLL 478

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
           + M S  L P   +Y  L+  H ++G+ + A    E M    + P     C  S  +G
Sbjct: 479 EEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLP--DLFCYNSLIKG 534



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 1/313 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG      +++ LIH   K+   +   ++ Q ML +   PN  T   L+    K   
Sbjct: 551 VQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSND 610

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +    +L  + G    P   +   +I  + + E +E   ++L  + +  ++ D   YS 
Sbjct: 611 HEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 670

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    KM ++E A+ + +EM K G       Y   I  +C  G I  A  +   +   G
Sbjct: 671 LISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG 730

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+  LI+G  K   I ++    + M+ R + P    +N +     +  + +QA 
Sbjct: 731 LLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQAL 790

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G++   + +S L+ G+ K G +QE  KL + M  + I P      ++I+  
Sbjct: 791 FLTEEMFNRGYAHVSL-FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEF 849

Query: 314 CQCGKLEEADKYF 326
            + GKL EA + F
Sbjct: 850 GKAGKLCEAHRVF 862



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 142/299 (47%), Gaps = 1/299 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A  + + +   G   +  ++  L+    KS+ ++ V  I Q ML +   P+    
Sbjct: 574 RNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I  L +   ++    +L  +      P + + +SLI  + +   +E+ + LL  M +
Sbjct: 634 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAK 693

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +    + Y+ ++    +  ++  A  V++ +L +G   N   YT  I   C+ G I +
Sbjct: 694 EGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITD 753

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L ++M + G+ P    +N+L  GC+ A  +E++L   E+M +R      S F+ ++R
Sbjct: 754 AFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YAHVSLFSTLVR 812

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             C+ G  ++   +L + +D+   PN  T  ++I  + K G++ E  +++ E++ K  S
Sbjct: 813 GFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKAS 871



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 52/127 (40%)

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ + A  ++ +  D G +P     + L+    +   ++ V KL   ME   I P +  Y
Sbjct: 189 GSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTY 248

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           ++ + + C+    + A K F+ M+          Y  ++      G   +A    EEMV 
Sbjct: 249 STFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVD 308

Query: 367 EGLKPST 373
            GL P  
Sbjct: 309 YGLSPDA 315


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 168/346 (48%), Gaps = 4/346 (1%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N +I  + ++ R      +Y+ M  +   P+  T   L+  L K  +L+  V +L  +  
Sbjct: 9   NVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVS 67

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
            R  P     T ++  +   +R+++   L++ ML + M  + I YS +V    K   L+ 
Sbjct: 68  ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 127

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A+ + E M +RG +     Y + I  +C   +++EA+  M++M   G  P   T+  LI 
Sbjct: 128 AVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIG 187

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K++ +   L    ++  R   P    ++ +I  LC+ G  + A  +     +   +P
Sbjct: 188 GFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSCAP 244

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
             ITY+ LIGGY + G++ E ++L  +M     +P +  YT+L+S+ C+ G+L++A + F
Sbjct: 245 TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELF 304

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + M ++ L P V  + SLV     +G    AL L EE+   G  P+
Sbjct: 305 QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 350



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 170/352 (48%), Gaps = 3/352 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
             +++  L+H ++K+ R     ++ Q M+     P+  T+  ++ +LC G ++    +++
Sbjct: 38  DFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 97

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  +  +   I  ++L+  + + ER++E + L++ M  +      + Y+ I+    + 
Sbjct: 98  EEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRA 157

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           R ++ A    E+M+  G   +   YT  IG +C+   +     L+ E+   G  P   T+
Sbjct: 158 RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTY 217

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + +I+G  KA R+ +++   E+M      P+   +N +I   C  G+  +A  +L   +D
Sbjct: 218 STVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
              +P+ +TY+ L+  + K G + +  +L+ +M    +SP +  +TSL+  LC  G++E+
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A +  + +      P +  Y  +V  + +     KA  L  +  S G  P+T
Sbjct: 335 ALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNT 386



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/361 (22%), Positives = 164/361 (45%), Gaps = 5/361 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG + + I+++ L+  + K +R D    + + M E    P   T  ++I+  C+  ++ 
Sbjct: 102 HRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVD 161

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                ++++  + C P +I  T+LI    +   +  G+ LL  + R+    D + YS ++
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   L  A+ ++EEM     +  +  Y + IG YC  G ++EA  L+ +M +    
Sbjct: 222 DGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCA 278

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  L+    K  R++++    +QM++ KL P    F  ++  LC  G  + A  +
Sbjct: 279 PDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 338

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     +G  P   TY+ ++ GY K  ++++  +L  +   +   P    Y  L++  C+
Sbjct: 339 LEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398

Query: 316 CGKLEEADKYFKIMKSHS--LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G+ ++A +Y   + S        V +Y  ++      G    A+   EEM+  G  P+ 
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 458

Query: 374 S 374
           +
Sbjct: 459 A 459



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 170/360 (47%), Gaps = 14/360 (3%)

Query: 13  YLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR---YPNEATIRTLIS 66
           ++EQ    G    +I++  LI    KS R+  V R  + + E  R    P+  T  T+I 
Sbjct: 166 FMEQMVAEGCHPDIITYTALIGGFCKS-RD--VGRGLELLGEVTRRGFTPDIVTYSTVID 222

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L+  VD+ + +    C+P  I   SLI    +   ++E + LL +M+      
Sbjct: 223 GLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAP 279

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++ A  KM  L+ A  ++++M+    S +   +T+ +   C  G++E+A  L+
Sbjct: 280 DVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 339

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E+   G  P   T+N +++G  KA ++ ++        SR  +P+   +N ++   C  
Sbjct: 340 EEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRA 399

Query: 247 GNAKQANGMLT-LALDKGFSPNEIT-YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           G   QA   L  L  + G  P  +  Y+ ++    ++G   + ++ Y EM  +   P   
Sbjct: 400 GRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA 459

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + +++ +LC+  + ++A +  + M  +   PG    +++V  +   G   KA  L  E+
Sbjct: 460 TFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 146/285 (51%), Gaps = 8/285 (2%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH--DTIAYSLIVYAKVKMRNLESA 147
           +P  +++  +I  + +  R+   + + ++M   N  H  D + Y+ +V+   K R L  A
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQM---NDAHPPDFLTYTKLVHGLSKARRLRDA 58

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           + V +EM+      ++   T  + + C   ++++A  L++EM + G+     T++ L++G
Sbjct: 59  VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K +R++E+++  E M  R   P+   +N +I   C      +A+G +   + +G  P+
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            ITY+ LIGG+ K  ++   L+L  E+  +  +P +  Y+++I  LC+ G+L +A   F+
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M   S  P    Y SL+G +   G+  +A+ L  +MV +   P 
Sbjct: 239 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 157/324 (48%), Gaps = 11/324 (3%)

Query: 9   DVCRYLE------QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           DV R LE      +RGF+  +++++T+I  + K+ R      I++ M      P   T  
Sbjct: 194 DVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYN 250

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +LI   C+ G +   + +L ++   +C+P V+  T+L+    +  R+++   L ++M+  
Sbjct: 251 SLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVAN 310

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + ++ +V        +E AL + EE+ +RG     + Y   +  YC+  ++ +A
Sbjct: 311 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKA 370

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR--KLLPSCSAFNEMI 240
             L+ +  + G  P   T+N+L+ GC +A R +++L Y +Q+ S       S + +  ++
Sbjct: 371 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 430

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G    A       + +G+ P   T++ ++    K  + Q+  +L  EM     +
Sbjct: 431 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 490

Query: 301 PTLPAYTSLISSLCQCGKLEEADK 324
           P      +++S+ C+ G +++AD+
Sbjct: 491 PGPGTCDAVVSAYCRAGMIQKADE 514


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 176/352 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ FN L+  V K ++ +LV  + + M       +  T    I+  C+  QL   + +L
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++  +SL+      +RI + + L+ +M+      DT  ++ +++     
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + ++M++RG   +   Y T +   C+ G I+ A  L+++ME   ++     +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+G  K K ++++L+   +M ++ + P    ++ +I  LC  G    A+ +L+  ++
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +  +PN +T+S LI  + KEG++ E  KLY EM  +SI P +  Y+SLI+  C   +L+E
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A   F++M S    P V  Y +L+    +     + + L  EM   GL  +T
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 177/372 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  + + +E+      ++ +NT+I  + K    D    ++  M      P+  T  +L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LC  G+      +L  +  ++ +P V+  ++LI   ++E ++ E   L   M+++++
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   YS ++        L+ A  ++E M+ +    N   Y+T I  +C+  ++EE   
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM   GL     T+  LI G  +A+  + +    +QM+S  + P+   +N ++  LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   +A  +          P+  TY+ +I G  K G++++  +L+  +  K +SP + 
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY ++IS  C+ G  EEAD   K MK    +P    Y +L+   L  G++  +  L +EM
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599

Query: 365 VSEGLKPSTSYL 376
            S G     S +
Sbjct: 600 RSCGFAGDASTI 611



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 174/367 (47%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+   +++ ++L++    S R      +   M+E    P+  T  TLI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L    +    V ++D++  + C P ++   +++  + +   I+  + LLK+M +  + 
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ I+    K ++++ AL ++ EM  +G   + F Y++ I   C YG+  +A+ L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M    + P   TF+ LI+   K  ++ E+    ++M+ R + P    ++ +I   C 
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  M  L + K   PN +TYS LI G+ K   ++E ++L+ EM  + +      
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT+LI    Q    + A   FK M S  + P +  Y  L+    + G  AKA+ + E + 
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495

Query: 366 SEGLKPS 372
              ++P 
Sbjct: 496 RSTMEPD 502



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 170/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  FE+   +   ++  G S  L +++  I+   +  +  L   +   M++    P+  T
Sbjct: 96  MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C   ++   V ++D++      P     T+LI  +    +  E + L+ +M+
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    D + Y  +V    K  +++ AL + ++M K    A+  +Y T I   C+Y  ++
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  EM+N G++P   T++ LI       R  ++      M+ RK+ P+   F+ +I
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TYS LI G+     + E   ++  M  K   
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y++LI   C+  ++EE  + F+ M    LV     Y +L+    +  +   A  +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455

Query: 361 CEEMVSEGLKPS 372
            ++MVS G+ P+
Sbjct: 456 FKQMVSVGVHPN 467



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 141/301 (46%), Gaps = 2/301 (0%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++   VD+   +   R  P ++    L+  + +  + E  + L ++M    + HD   YS
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           + +    +   L  AL V  +M+K G+  +    ++ +  YC   +I +A  L+ +M   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G KP   TF  LI G     +  E+++  +QM+ R   P    +  ++  LC+ G+   A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             +L   ++KG    + + Y+ +I G  K   + + L L+ EM+ K I P +  Y+SLIS
Sbjct: 243 LSLLK-KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+  +A +    M    + P V  + +L+   +++G   +A  L +EM+   + P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361

Query: 372 S 372
            
Sbjct: 362 D 362



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/275 (21%), Positives = 117/275 (42%), Gaps = 35/275 (12%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           ++++ + L   M++       + ++ ++ A  KM   E  + + E+M   G S + + Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
            FI  +C   ++  A  ++ +M   G +P   T + L+ G   +KRI ++++  +QM+  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
              P    F  +I  L     A +A  ++   + +G  P+ +TY  ++ G  K G+I   
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           L L  +ME   I   +  Y ++I  LC+   +++A                         
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA------------------------- 277

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
                     L+L  EM ++G++P      S  +C
Sbjct: 278 ----------LNLFTEMDNKGIRPDVFTYSSLISC 302


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 168/338 (49%), Gaps = 5/338 (1%)

Query: 38  RNDLVWRIY----QHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMV 93
           R+   W I+      ++  +  P   T  TL++ L K G ++  + +L+ +     SP V
Sbjct: 449 RSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDV 508

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
           I   S++  + +E+RI +   + KR L +    + + YS ++    KM  ++ AL +  +
Sbjct: 509 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 568

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M++ G  AN+  Y+T +    + G++E+A  ++++M +AG  P   T+N LI+G  K +R
Sbjct: 569 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 628

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           + E++    +M+     PS   +  +   LC  G   +A  +L     +G +PN ITYS 
Sbjct: 629 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 688

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
           ++ G  K G + E L  + +M     ++P + AY++LI  LC+ G+++EA ++ + M   
Sbjct: 689 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             +P V  +  L+    + G     L L   M   G K
Sbjct: 749 GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCK 786



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 174/353 (49%), Gaps = 1/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L+++NTL+  ++KS        + + M+E+   P+  T  +++  LCK  ++    ++ 
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            R   + C P V+  ++LI  + +  +++E + LL +M+      +T+ YS +V   +K+
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +E A+VV  +M   G   ++  Y T I  + +  ++ EA  L++EM  AG  P   T+
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-TLAL 260
             L  G  ++ R +E++   + M +R   P+   ++ ++  LC+ G   +A G    +A 
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           D+  +P+ I YS LI G  K G I E  +    M      P +  ++ LI+ LC  G+++
Sbjct: 712 DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 771

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              + F  M        +  Y +++  +  KG  + A  L EEM + G+  +T
Sbjct: 772 TGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNT 824



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 177/372 (47%), Gaps = 12/372 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R + + GF  S++++ TL H + +S R D    I  +M      PN  T  +++ 
Sbjct: 632 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 691

Query: 67  ALCKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            LCK G++   +   +++   +  +P VI  ++LI  + +  RI+E    L+RM+R   I
Sbjct: 692 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI 751

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + +S+++        +++ L ++  M +RG  A+ + Y   I AYC  G+   A  L
Sbjct: 752 PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYAL 811

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS---AFNEMIRR 242
           ++EM+  G+     T  ++I+      RI+E++SY   +        C    ++N +I  
Sbjct: 812 LEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE-----DCRDEISYNTLITS 866

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L     ++QA  +L   +  G SP+   Y  ++ G  K G  +   KL  EM  +  SP 
Sbjct: 867 LVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPD 926

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           L  YT +IS L +  +L  A  YF+ M   +L P   +Y SL+    +      A  L  
Sbjct: 927 LRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL-- 984

Query: 363 EMVSEGLKPSTS 374
            + S G++P+ +
Sbjct: 985 -LRSSGIEPTIT 995



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 159/323 (49%), Gaps = 6/323 (1%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           ++++N LI+ + K+ R    +  ++  ++    P   T  T+I  LC+  ++     +L+
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            + G+ C+P  +   +L+  ++ + R +E   LL+RM       + I + LI+    K  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            +E+A  V +EM+ RGF  +  ++T  + A CE G+++EA    Q++   G  P   T+N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +++G  KA R+E +    + +      P+   F   +  L + GN   A          
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G SPN +TY  LI G  K G++   L L  +   K+    + A++SL+  LCQ  +LEEA
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 323 DKYFKIMKSHSLVPGVDIYESLV 345
               +++K+   VP V  + SL+
Sbjct: 298 ---IQLLKAMPCVPNVVCFNSLM 317



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 163/329 (49%), Gaps = 1/329 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +  ++ + G S  +I+FN+++  + K  R      +++  LE    PN  T  TLI 
Sbjct: 492 ALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 551

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  ++   + +L ++    C    +  ++++  +++  R+E+ +V+L++M     + 
Sbjct: 552 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 611

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++    K + L  A+ +  EML+ GF  +   YTT     C  G+ +EA  ++
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL-PSCSAFNEMIRRLCE 245
             M   G  P   T++ +++G  KA R+ E+L Y E+M   +++ P   A++ +I  LC+
Sbjct: 672 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCK 731

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G   +A   L   +  G  P+ +T+S LI G    G I   L+L+  M  +     + A
Sbjct: 732 AGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYA 791

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           Y ++I++ C  G+   A    + MK+H +
Sbjct: 792 YNAMINAYCLKGEFSAAYALLEEMKTHGI 820



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 163/339 (48%), Gaps = 6/339 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF   R   Q GF  ++++++T+I  + + +  D   ++ + M      PN  T  TL++
Sbjct: 20  AFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVN 79

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL   G+ +    +L+R+    C P +I    +I  + +E  IE    ++  M+ +  + 
Sbjct: 80  ALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVP 139

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   ++++++A  ++  ++ A   ++++L  GF+ ++  Y T +    + G++E A  ++
Sbjct: 140 DVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVL 199

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           Q +  +   P   TF + ++G +KA  +  +  + + M    + P+   ++ +I  LC+ 
Sbjct: 200 QLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKA 259

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A G+L    DK        +S L+ G  +   ++E ++L   M      P +  +
Sbjct: 260 GKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCF 313

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            SL++ LCQ  +++EA + F +MK       V  Y  L+
Sbjct: 314 NSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILL 352



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 168/384 (43%), Gaps = 30/384 (7%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  +     + +F++L+H + ++ R +   ++ + M      PN     +L++ LC+  +
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARR 325

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYS 132
           +    ++ D +    CS  VI    L+  + +  RI E    ++ M R +    + + +S
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFS 385

Query: 133 LIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYG---KIEEANCLMQE 188
            ++        +  A  VYE M+   G S N F Y   +   C+ G   ++E+  C  Q 
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQ--CFEQM 443

Query: 189 MENAG--------------------LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           +E                        +P   T+N L+ G +K+  + ++L   E M+   
Sbjct: 444 LEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESG 503

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           L P    FN ++  LC+      A+ +   AL++G  PN +TYS LI G +K  ++ E L
Sbjct: 504 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 563

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +L  +M           Y++++  L + G++E+A    + M+    +P    Y +L+   
Sbjct: 564 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 623

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++    +A+ L  EM+  G  PS
Sbjct: 624 FKRQRLREAVGLLREMLEAGFHPS 647



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 168/395 (42%), Gaps = 37/395 (9%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN-IRYPNEATIR 62
            F+ A ++  Y+  RG + + I++++++  + K+ R       ++ M  + +  P+     
Sbjct: 664  FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 723

Query: 63   TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             LI  LCK G++    + L+R+      P V+  + LI  +    RI+ G+ L   M  +
Sbjct: 724  ALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783

Query: 123  NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                D  AY+ ++ A        +A  + EEM   G + N+  +   I A C   +I+EA
Sbjct: 784  GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843

Query: 183  ---------NC------------------------LMQEMENAGLKPYDETFNLLIEGCA 209
                     +C                        L++ M   G  P    +  +++G  
Sbjct: 844  VSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF 903

Query: 210  KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
            KA   E +    ++M SR   P    +  MI  L +      A       L K   P+ I
Sbjct: 904  KAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAI 963

Query: 270  TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
             YS LI  + K  ++ +  KL   +    I PT+  Y++++ SLC+    ++A +  + M
Sbjct: 964  VYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREM 1020

Query: 330  KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            KS +  PG+ I+ SL   ++ +G   +A+ L  ++
Sbjct: 1021 KSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/393 (22%), Positives = 172/393 (43%), Gaps = 29/393 (7%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  V + L +   S ++ +F   +  ++K+      +  +  M +    PN  T   
Sbjct: 192 LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDA 251

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LCK G+L   + +L     K     +   +SL+  + Q  R+EE + LLK M    
Sbjct: 252 LIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---P 305

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + + + ++ ++    + R ++ A  +++ M + G SA+   Y   +   C+  +I EA 
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365

Query: 184 CLMQEMENA-GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS-RKLLPSCSAFNEMIR 241
             ++ M    G  P   TF+ LI+G   A R+ ++    E+M++   + P+   +  ++ 
Sbjct: 366 RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425

Query: 242 RLCECGNAKQANGMLTLALDKGFS---------------------PNEITYSHLIGGYAK 280
            LC+ G++++        L++ +                      P  +TY+ L+ G +K
Sbjct: 426 GLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSK 485

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G +++ L L   M    +SP +  + S++  LC+  ++ +A   FK        P V  
Sbjct: 486 SGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVT 545

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           Y +L+    +     +AL L  +MV  G + +T
Sbjct: 546 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 578



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 161/393 (40%), Gaps = 33/393 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF V   +  RGF   +     L+H + +  R D  W  +Q +L     P+  T  T+
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  L K G+L+    +L  +     SP V   T  +  + +   +         M +  +
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +T+ Y  ++    K   L+ AL +  +   +   A  F +++ +   C+  ++EEA  
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++ M      P    FN L+ G  +A+R++E+    + M           +N +++ LC
Sbjct: 300 LLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356

Query: 245 ECGNAKQANGMLTLA-LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPT 302
           +     +A   + L    +G SPN +T+S LI G    G + +  ++Y  M   + ISP 
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM-----------KSHSLVPGVDI----------- 340
              Y  L+  LC+ G     ++ F+ M             HS  P VD            
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHS--PEVDFLMVQVCRPTLV 474

Query: 341 -YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +LV    + G    AL L E M+  GL P 
Sbjct: 475 TYNTLVTGLSKSGMVRDALGLLEFMIESGLSPD 507



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 107/245 (43%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y++++    K   +  A   + + ++ GF      Y+T I   C   ++++   L++E
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G  P   T+N L+       R +E+ S  E+M +    P    F  +I+ LC+ G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  ++   +D+GF P+   ++ L+    + G + E    + ++     +P    Y +
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           ++  L + G+LE A    +++      P V  +   V    + GN   A    + M   G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 369 LKPST 373
           + P+T
Sbjct: 242 VSPNT 246



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 133/338 (39%), Gaps = 65/338 (19%)

Query: 23   LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
            +I+++ LI  + K+ R D  +   + M+   R P+  T   LI+ LC  G++ T +++  
Sbjct: 719  VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFC 778

Query: 83   RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM----LRKNMI------------- 125
             +  + C   +    ++I     +        LL+ M    + KN +             
Sbjct: 779  GMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGND 838

Query: 126  ----------------HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
                             D I+Y+ ++ + V  R  E AL +   M+  G S ++  Y T 
Sbjct: 839  RIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTV 898

Query: 170  IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
            +    + G  E A  L+QEM + G  P   T+ ++I G +KAK++  +  Y E+M+ + L
Sbjct: 899  MDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNL 958

Query: 230  LPSCSAFNEMIRRLCECGNAKQANGML-----------------TLALDKGFS------- 265
             P    ++ +I   C+      A  +L                 +L  ++G         
Sbjct: 959  KPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018

Query: 266  --------PNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
                    P    ++ L   Y  EG + E +KL  +++
Sbjct: 1019 EMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 5/190 (2%)

Query: 2    RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
            R  E A ++ R +   G S    ++ T++  + K+   ++  ++ Q M      P+  T 
Sbjct: 871  RRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTY 930

Query: 62   RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              +IS L K  QL    D  + +  K   P  IV +SLI    + +++++      ++LR
Sbjct: 931  TIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAW----KLLR 986

Query: 122  KNMIHDTIA-YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             + I  TI  YS +V +  K R  + AL V  EM  +       ++T+   AY   G+++
Sbjct: 987  SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVD 1046

Query: 181  EANCLMQEME 190
            EA  L+ +++
Sbjct: 1047 EAVKLVNDLQ 1056


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 180/394 (45%), Gaps = 37/394 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  + L+++  L+  + K  + D V    +  L +    N  T   LI ALCK   + 
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLI 134
               +L  +  K  SP V+  +S+I   ++   +++     KRM+++  I+ + + Y  +
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEYKRMMKERGINPNVVTYGTL 455

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K +  ++AL VY +ML  G   N F+  + +    + GKIEEA  L ++   +GL
Sbjct: 456 IDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGL 515

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                 +  LI+G  KA  +  +  + +++M R +LP    +N  I  LC  G  K+A  
Sbjct: 516 SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKS 575

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +LT   + G  P++ TY+ +I  + ++GE  + LKL +EM+  SI P L  Y +L++ L 
Sbjct: 576 ILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF 635

Query: 315 QCGKLEEADKYFKIMKSHSLVPG--------------------VDIYESLV--GIHLE-- 350
             G +E+A      M S    P                     +DI+E ++  G+H +  
Sbjct: 636 GTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 351 -----------KGNKAKALHLCEEMVSEGLKPST 373
                       G   KA  + EEM+  G+ P T
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 157/332 (47%), Gaps = 3/332 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+++T  T+I + C+ G+    + +L  +      P +I   +L+  +     +E+   L
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M+       ++ +  ++ A  + R L+  L ++E M+  G  A+  VY T +   C 
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +G   +A  +++EM  +G+ P   TFN LI G  K+  ++ + +   QM+ + + P+ + 
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN ++  L   G   +A  +L      G  PN +TY  L+ G+ K+    E ++LY EM 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMV 826

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K   P +  Y +LIS   + G + +A + FK M+   + P    Y+ LV       N  
Sbjct: 827 GKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGT 886

Query: 356 KALHLCEEMVSEGLKPST---SYLCSASTCRG 384
           +     ++M  +G  PS    S++C A +  G
Sbjct: 887 EVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 182/407 (44%), Gaps = 35/407 (8%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A +  R +++RG + +++++ TLI    K    D    +Y  ML      N+  + 
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVD 488

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +L++ L + G+++  + +     G   S   +  T+LI  + +   +       + ++ +
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 123 NMIHDTIAYS-----LIVYAKVK--------MRNL----------------------ESA 147
           NM+ D + Y+     L +  K K        MRN+                        A
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L +  EM       N   Y T +      G +E+A  L+ EM +AG  P   T   +++ 
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
           C++++R++  L   E MM+  L    + +N +++ LC  G  ++A  +L   L  G +P+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            IT++ LI G+ K   +      Y +M +++ISP +  + +L+  L   G++ EA     
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            M+   L P    Y+ LV  H ++ NK +A+ L  EMV +G  P  S
Sbjct: 789 EMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 166/360 (46%), Gaps = 11/360 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQ-----HMLENIRYPNEATIRTLISALCK 70
           +RG     ++ NTL+  + ++ + D    +       H L+ I +       TLI+  C+
Sbjct: 128 KRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGW------NTLIAGYCR 181

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G     + + DR+  +     V+   +L+    +  +++    +L  M    +  +   
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+  +    + + +E A  +YE M++ G   +    +  +   C  G+  EA  L +EM+
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P   T+  LI+  AKA R +E LS   +M+SR ++     +  ++  L + G   
Sbjct: 302 KVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +    L  AL    S N +TY+ LI    K   + E  ++  EME KSISP +  ++S+I
Sbjct: 362 EVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +   + G L++A +Y ++MK   + P V  Y +L+    +   +  AL +  +M+ EG++
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVE 481



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 174/368 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AFD+   + + G  L +++ + L+  + +  R    + +++ M +    PN  T  TL
Sbjct: 256 EEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTL 315

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +L K G+ +  + +L  +  +     ++  T+L+  + ++ + +E    L+  L  N+
Sbjct: 316 IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL 375

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y++++ A  K  N++ A  V  EM ++  S N   +++ I  + + G +++A  
Sbjct: 376 SLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             + M+  G+ P   T+  LI+G  K +  + +L     M+   +  +    + ++  L 
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLR 495

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +   A   G S + + Y+ LI G  K G++    K   E+  +++ P   
Sbjct: 496 QNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAV 555

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y   I+ LC  GK +EA      M++  L P    Y +++  H  KG  AKAL L  EM
Sbjct: 556 VYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615

Query: 365 VSEGLKPS 372
               +KP+
Sbjct: 616 KMSSIKPN 623



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 8/365 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK-GG 72
           +E++  S ++++F+++I+   K    D      + M E    PN  T  TLI    K  G
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 73  Q---LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           Q   L+ Y DML    G   +  ++   SL+  + Q  +IEE M L K      +  D +
Sbjct: 465 QDAALEVYHDML--CEGVEVNKFIV--DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++    K  ++ +A    +E++ R    ++ VY  FI   C  GK +EA  ++ EM
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEM 580

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            N GLKP   T+N +I    +     ++L    +M    + P+   +N ++  L   G  
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +L   +  GFSP+ +T+  ++   ++   +  +L ++  M    +   +  Y +L
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC  G   +A    + M    + P    + +L+  H +  +   A     +M+ + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 370 KPSTS 374
            P+ +
Sbjct: 761 SPNIA 765



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 144/307 (46%), Gaps = 2/307 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +LI++NTL+  +  +   +    +   M+     P+  T R ++ A  +  +L   +D+ 
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +        + V  +L+  +       +  V+L+ ML   +  DTI ++ ++    K 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L++A   Y +ML +  S N   + T +G     G+I EA  ++ EME +GL+P + T+
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 202 NLLIEGCAK-AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++L+ G  K + ++E    YCE M+ +  +P  S +N +I    + G   QA  +     
Sbjct: 803 DILVTGHGKQSNKVEAMRLYCE-MVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQ 861

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G  P   TY  L+ G+++     EV K   +M+ K  SP+    + +  +  + G   
Sbjct: 862 KRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 321 EADKYFK 327
           +A +  K
Sbjct: 922 QAQRLLK 928



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 152/364 (41%), Gaps = 3/364 (0%)

Query: 9   DVCRYLEQRG---FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D    L  RG    +L +I +NTLI    +         +   M       +     TL+
Sbjct: 152 DAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           +  C+ GQ+     +LD +      P V   T  I+   + + +EE   L + M+R  ++
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D +  S +V    +      A  ++ EM K G   N   Y T I +  + G+ +E   L
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM + G+     T+  L++   K  + +E        +S  L  +   +  +I  LC+
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCK 391

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             N  +A  +L    +K  SPN +T+S +I G+ K G + +  +    M+ + I+P +  
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI    +    + A + +  M    +     I +SLV    + G   +A+ L ++  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 366 SEGL 369
             GL
Sbjct: 512 GSGL 515



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 128/321 (39%), Gaps = 40/321 (12%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T+ TL++ LC+ GQ+     + DR  G                                 
Sbjct: 137 TVNTLLAGLCRNGQVDAAAALADRGGG--------------------------------- 163

Query: 120 LRKNMIH--DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
                IH  D I ++ ++    ++ +  +AL V + M  +G   +   Y T +  +C  G
Sbjct: 164 -----IHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAG 218

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +++ A  ++  M+ AG+ P   T+   I    + K +EE+    E M+   +L      +
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  LC  G   +A  +       G  PN +TY  LI   AK G  +E+L L  EM  +
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            +   L  YT+L+  L + GK +E     +   S +L      Y  L+    +  N  +A
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEA 398

Query: 358 LHLCEEMVSEGLKPSTSYLCS 378
             +  EM  + + P+     S
Sbjct: 399 EQVLLEMEEKSISPNVVTFSS 419



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 8/259 (3%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  +V  D+  ++   G    +  +NTL+ V+           + + ML +   P+  T 
Sbjct: 673 RRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITF 732

Query: 62  RTLISALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             LI   CK   L     TY  ML     +  SP +    +L+  +    RI E   +L 
Sbjct: 733 NALILGHCKSSHLDNAFATYAQMLH----QNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M +  +  + + Y ++V    K  N   A+ +Y EM+ +GF      Y   I  + + G
Sbjct: 789 EMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            + +A  L ++M+  G+ P   T+++L+ G ++ +   E     + M  +   PS    +
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 238 EMIRRLCECGNAKQANGML 256
            + R   + G   QA  +L
Sbjct: 909 FICRAFSKPGMTWQAQRLL 927



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/253 (20%), Positives = 105/253 (41%), Gaps = 11/253 (4%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  + + ++Y+  ++R L  A+      L R     +  Y   + A  ++     A  ++
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIA-----LLRSSRPTTVAYNILLAALSDHA---HAPAVL 123

Query: 187 QEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM   G+ P+D  T N L+ G  +  +++ + +  ++      L     +N +I   C 
Sbjct: 124 AEMCKRGV-PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTLIAGYCR 181

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+   A  +      +G   + + Y+ L+ G+ + G++     +   M+   + P +  
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT  I   C+   +EEA   ++ M  + ++  V    +LV      G  ++A  L  EM 
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 366 SEGLKPSTSYLCS 378
             G  P+    C+
Sbjct: 302 KVGAVPNHVTYCT 314


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 170/353 (48%), Gaps = 4/353 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FNT++  + +    D   ++  HM E+   P+  T  +++  LC  G++   V++L R
Sbjct: 303 VTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSR 362

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C P  I  T+++  +   E+ E    L+  M+  +   D + ++ ++ +  +   
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A+ V E+M + G + +   Y + I   C    I++A  L+  +++ G KP   TFN 
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L++G     R E++      MM     P  + FN +I  LC+ G   QA   L +  + G
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN+ TY+ ++    K G+ QE LKL   M     +P L  Y ++IS++ + GK+EEA 
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEAL 600

Query: 324 KYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
              ++M S+ L P    Y SL  GI  E G       LC  +   GL P  ++
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLC-RLQDMGLSPDATF 652



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/364 (21%), Positives = 160/364 (43%), Gaps = 3/364 (0%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R     G S +++++NT+++   ++ R +   R+   M      P+  T   LI AL
Sbjct: 116 DAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRAL 172

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C  G++   + + D +  + CSP V+  + L+    +     + MVLL  M  K    D 
Sbjct: 173 CVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDI 232

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y++++ A     +++ AL +  ++   G   ++  YT  + + C   + +E   L  E
Sbjct: 233 VTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAE 292

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M +    P + TFN ++    +   ++ ++   + M     +P    ++ ++  LC+ G 
Sbjct: 293 MASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A  +L+     G  P+ I Y+ ++ G     + +   +L  EM      P    + +
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+SLCQ G ++ A K  + M  +   P +  Y S++     +     A+ L   + S G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 369 LKPS 372
            KP 
Sbjct: 473 CKPD 476



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/354 (21%), Positives = 152/354 (42%), Gaps = 6/354 (1%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
             L ++  N LI  +    R     R++  +  +       T  T+++  C+ G+++   
Sbjct: 94  LPLPVVPCNILIKRLCSGGRVADAERVFATLGASATV---VTYNTMVNGYCRAGRIE--- 147

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           D    I G    P       LI  +    R+ + + +   ML +      + YS+++ A 
Sbjct: 148 DARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDAT 207

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K      A+V+ +EM  +G   +   Y   I A C  G ++EA  ++ ++ + G KP  
Sbjct: 208 CKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDA 267

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+  +++    ++R +E      +M S K  P    FN ++  LC+ G   +A  ++  
Sbjct: 268 VTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDH 327

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
             + G  P+ +TYS ++ G    G + + ++L   ++     P   AYT+++  LC   +
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            E A++    M      P    + +++    +KG   +A+ + E+M   G  P 
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPD 441



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/363 (20%), Positives = 164/363 (45%), Gaps = 8/363 (2%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY----PNEATIRTLISALCKG 71
            RG S S+++++ L+    K+      +R    +L+ +R     P+  T   LI+A+C  
Sbjct: 190 HRGCSPSVVTYSILLDATCKASG----YRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNE 245

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +   +++L  +    C P  +  T ++  +   ER +E   L   M       D + +
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTF 305

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + IV +  +   ++ A+ V + M + G   +   Y++ +   C+ G++++A  L+  +++
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G KP    +  +++G    ++ E +     +M+     P    FN +I  LC+ G   +
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ++    + G +P+ +TY+ +I G   E  I + ++L   ++     P +  + +L+ 
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLK 485

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC   + E+A++    M      P    + +++    +KG   +A+   + M   G  P
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIP 545

Query: 372 STS 374
           + S
Sbjct: 546 NQS 548



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/353 (20%), Positives = 151/353 (42%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G    ++++N LI+ +      D    I   +  +   P+  T   ++ +LC   +
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +   ++   +   +C+P  +   +++  + Q+  ++  + ++  M     I D + YS 
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSS 342

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+     +  ++ A+ +   +   G   ++  YTT +   C   + E A  LM EM  + 
Sbjct: 343 ILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD 402

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P + TFN +I    +   ++ ++   EQM      P    +N +I  LC       A 
Sbjct: 403 CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L+     G  P+ +T++ L+ G       ++  +L   M +    P    + ++I+SL
Sbjct: 463 ELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           CQ G L +A +  KIM  +  +P    Y  +V   L+ G   +AL L   M +
Sbjct: 523 CQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN 575



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/337 (18%), Positives = 145/337 (43%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R +    F     +FN LI  +    R      ++  ML     P+  T   L+ A 
Sbjct: 148 DARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDAT 207

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK    +  + +LD +  K C P ++    LI  +  E  ++E + +L  +       D 
Sbjct: 208 CKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDA 267

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y+ ++ +       +    ++ EM     + +   + T + + C+ G ++ A  ++  
Sbjct: 268 VTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDH 327

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G  P   T++ +++G     R+++++    ++ S    P   A+  +++ LC    
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  ++   +     P+E+T++ +I    ++G +   +K+  +M     +P +  Y S
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +I  LC    +++A +    ++S+   P +  + +L+
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLL 484



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/335 (20%), Positives = 150/335 (44%), Gaps = 2/335 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   L+  G     I++ T++  +   ++ +    +   M+ +   P+E T  T+I+
Sbjct: 356 AVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIA 415

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LC+ G +   + +++++    C+P ++   S+I  +  E  I++ M LL  +       
Sbjct: 416 SLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKP 475

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++     +   E A  +   M+      ++  + T I + C+ G + +A   +
Sbjct: 476 DIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETL 535

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G  P   T+N++++   KA + +E+L     M +    P    +N +I  + + 
Sbjct: 536 KIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT--PDLITYNTVISNITKA 593

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +L + +  G SP+ ITY  L  G  +E      +++   ++   +SP    Y
Sbjct: 594 GKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFY 653

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             ++   CQ  + + A   F  M S   +P    Y
Sbjct: 654 NDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTY 688



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 131/287 (45%), Gaps = 7/287 (2%)

Query: 88  RCSPMVIVNTS-LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           +C P+ +V  + LI R+    R+ +   +   +     +   + Y+ +V    +   +E 
Sbjct: 92  KCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASATV---VTYNTMVNGYCRAGRIED 148

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A  +   M    F  ++F +   I A C  G++ +A  +  +M + G  P   T+++L++
Sbjct: 149 ARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLD 205

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              KA    +++   ++M ++   P    +N +I  +C  G+  +A  +L+     G  P
Sbjct: 206 ATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKP 265

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + +TY+ ++         +EV +L+ EM     +P    + ++++SLCQ G ++ A K  
Sbjct: 266 DAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVV 325

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             M  H  +P +  Y S++    + G    A+ L   + S G KP T
Sbjct: 326 DHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDT 372



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 2/303 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FNT+I  + +    D   ++ + M EN   P+  T  ++I  LC    +   +++L  
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C P ++   +L+  +   +R E+   L+  M+  +   D   ++ ++ +  +   
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L  A+   + M + G   N   Y   + A  + GK +EA  L+  M N    P   T+N 
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I    KA ++EE+L     M+S  L P    +  +   +C      +A  ML    D G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+   Y+ ++ G+ +       +  +  M      P    Y  L+ +L     L+EA 
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAK 705

Query: 324 KYF 326
           +  
Sbjct: 706 QLL 708



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/235 (21%), Positives = 106/235 (45%), Gaps = 2/235 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++   L+  G    +++FNTL+  +   DR +   ++  +M+ +   P+  T 
Sbjct: 456 RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTF 515

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I++LC+ G L   ++ L  +    C P       ++  +++  + +E + LL  M  
Sbjct: 516 NTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM-- 573

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
            N   D I Y+ ++    K   +E AL +   M+  G S ++  Y +     C     + 
Sbjct: 574 TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           A  ++  +++ GL P    +N ++ G  +  R + ++     M+S   +P  S +
Sbjct: 634 AIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTY 688



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/292 (20%), Positives = 120/292 (41%), Gaps = 2/292 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A  V   + + G +  ++++N++I  +      D    +  ++      P+  T  
Sbjct: 422 LVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFN 481

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL+  LC   + +    ++  +    C P      ++I  + Q+  + + +  LK M   
Sbjct: 482 TLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAEN 541

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             I +   Y+++V A +K    + AL +   M     + +   Y T I    + GK+EEA
Sbjct: 542 GCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEA 599

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++ M + GL P   T+  L  G  +    + ++    ++    L P  + +N+++  
Sbjct: 600 LDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLG 659

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            C+      A       +  G  P+E TY  L+   A E  + E  +L   +
Sbjct: 660 FCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 177/369 (47%), Gaps = 42/369 (11%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF   ++++N LI+   K+D+ D   RI Q M+     P+  T  +L++ LCK G++ 
Sbjct: 73  KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER-IEEGMVLLKRMLRKNMIHDTIAYSLI 134
               ML  I  K  SP VI  ++LI  + +E R + E + L   +L++    +   Y+++
Sbjct: 133 E-ARML--IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNIL 189

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +   +K   +  A  ++  ++K G   ++  YT FI   C+ G++E+A  ++++M+  G 
Sbjct: 190 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 249

Query: 195 KPYDETFNLLIEGCAKAKRIEES-----------------------------------LS 219
            P   + N +I G  K KR++E+                                   ++
Sbjct: 250 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 309

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCEC---GNAKQANGMLTLALDKGFSPNEITYSHLIG 276
             ++M+ R + P+   +N ++  LC+    G  K+A  +    ++KG  P+ +TYS LI 
Sbjct: 310 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 369

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G  K G++ +  +L   ME K   P +  Y SLIS LC   K++EA + F  M     VP
Sbjct: 370 GLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVP 429

Query: 337 GVDIYESLV 345
               Y +++
Sbjct: 430 DTITYGTII 438



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 174/364 (47%), Gaps = 7/364 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + GF  + I++N L+  +    R      +Y+ M++    P+  T  TL+   CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   + + D    +   P V+   +LI    + ++++E   +L+RM+ +N++ D + Y+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENA 192
           +V    K   ++ A ++   ++ +GFS N   Y+T I   C E   + EA  L   +   
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   T+N+LI+G  K  R+ E+      ++   L P    +   I  LC+ G  + A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ML    +KG  P+ ++++ +I G  KE  + E   L   ME K  SP   ++ +LI  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GI--HLEKGNKAKALHLCEEMVSEGL 369
            C+ GK ++A   FK M    + P V  Y  LV G+    ++G   +A+ L + M+ +G 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 370 KPST 373
            P  
Sbjct: 358 VPDV 361



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 173/362 (47%), Gaps = 7/362 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G+S  ++++NTL+H   K    D   +I+   ++    P+  T   LI+  CK  +L 
Sbjct: 38  KAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLD 97

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L R+  +   P V+   SL+  + +  R++E  +L+   + K    + I YS ++
Sbjct: 98  EAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLI 154

Query: 136 YAKVK-MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
               + +R +  AL ++  +LK+G+      Y   I    +  ++ EA  L   +   GL
Sbjct: 155 SGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGL 214

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   T+ + I+G  KA R+E++L   + M  +  +P   + N +I  LC+     +A  
Sbjct: 215 EPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEV 274

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L+    KG SPN I+++ LI G  + G+ ++ +  + EM  + + PT+  Y  L+  LC
Sbjct: 275 LLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLC 334

Query: 315 ---QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              Q G+++EA   F  M     VP V  Y +L+    + G    A  L   M ++G  P
Sbjct: 335 KARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIP 394

Query: 372 ST 373
           + 
Sbjct: 395 NV 396



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 147/301 (48%), Gaps = 4/301 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
            +GFS ++I+++TLI  + +  R      +++  +L+    P   T   LI  L K  ++
Sbjct: 140 DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRV 199

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
               ++   +      P  I  T  I  + +  R+E+ +++LK M  K  + D ++++ +
Sbjct: 200 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 259

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K + ++ A V+   M  +G S N+  + T I   C  GK ++A    +EM   G+
Sbjct: 260 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 319

Query: 195 KPYDETFNLLIEGCAKAK---RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           KP   T+N+L++G  KA+   RI+E+++  + M+ +  +P    ++ +I  L + G    
Sbjct: 320 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 379

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L     KG  PN  TY+ LI G     ++ E L+L+  M  K   P    Y ++IS
Sbjct: 380 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439

Query: 312 S 312
           +
Sbjct: 440 A 440



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 111/237 (46%), Gaps = 3/237 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   L + G     I++   I  + K+ R +    + + M E    P+  +   +I+
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  ++     +L  +  K CSP  I   +LI    +  + ++ M   K ML++ +  
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321

Query: 127 DTIAYSLIVYAKVKMRN---LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
             + Y+++V    K R    ++ A+ +++ M+++G   +   Y+  I    + GK+++A 
Sbjct: 322 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 381

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            L+  ME  G  P   T+N LI G    ++++E+L     M+ +  +P    +  +I
Sbjct: 382 RLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 170/383 (44%), Gaps = 36/383 (9%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FNT+     K+ R + V  +YQ M+E       +    LIS LCK G       +L  +
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             KR     I  +++I  + +  R+EE   L+++M R     D + Y  IV    K + +
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-YAPPDALTYGPIVERLCKTKRI 130

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + AL   EEM  RG   ++F+Y   +   C+  K+EEA  L ++M    + P   T+N L
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTL 190

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE------------------- 245
           I G  KA RIE +    ++M  +  +P+  ++N +I   C+                   
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250

Query: 246 ----------------CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
                            G  + A  +L   + KG +PN  TYS LI G+ K   + E  K
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHK 310

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L  +M  + I+PT+  Y  L++SLC+  KLE+A K F+ M      P V  Y +L+    
Sbjct: 311 LLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC 370

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
                  A  L  EM+++G  P 
Sbjct: 371 HHKQLDGAHRLYAEMIAKGCPPD 393



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/363 (20%), Positives = 177/363 (48%), Gaps = 5/363 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEATI 61
           F+ A+ +   +  + F    I+++T+I+ + K +R +    + + M    RY  P+  T 
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM---ARYAPPDALTY 117

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             ++  LCK  ++   +  ++ +  +   P   +   ++  + QEE++EE  +L ++M++
Sbjct: 118 GPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVK 177

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  + + Y+ ++    K   +E+A  +++EM  +G+      Y T I  +C+   +  
Sbjct: 178 QRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVA 237

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  +M  +   P   T+  LI+G +K+ +++ +    + M+ + + P+ + ++ +I 
Sbjct: 238 AKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID 297

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+     +A+ +L   + +G +P  +TY+ L+    +  ++++  KL+  M  +   P
Sbjct: 298 GFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           T+  Y +L+ +LC   +L+ A + +  M +    P    Y++L       G   +A  L 
Sbjct: 358 TVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELM 417

Query: 362 EEM 364
           E+M
Sbjct: 418 EKM 420



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 143/288 (49%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG       +N ++  + + ++ +    +++ M++    PN  T  TLI+ LCK  +
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++T  ++   + GK   P  +   +LI    +++ +     +  +M+R N + + + Y+ 
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +++A  V + M+K+G + N   Y+  I  +C+  +++EA+ L+++M   G
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 319

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N+L+    +A ++E++      M  R+  P+   +N ++R LC       A+
Sbjct: 320 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 379

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +    + KG  P+ ITY  L  G  + G++ E  +L  +M+    +P
Sbjct: 380 RLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 152/321 (47%), Gaps = 9/321 (2%)

Query: 56  PNEATIRTLISALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE 111
           P  AT  T+     K G+L+     Y  M++  +  R S   I    LI  + +    +E
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGI----LISCLCKVGNFDE 63

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
              LL  M  K      IAYS I+    K+  +E A  + E+M  R    ++  Y   + 
Sbjct: 64  AYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVE 122

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             C+  +I++A   ++EM   G+KP    +N ++ G  + +++EE+    E+M+ +++ P
Sbjct: 123 RLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINP 182

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +   +N +I  LC+    + A  +      KG+ P E++Y+ LI G+ K+ ++     ++
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +M   +  P +  YT+LI  L + GK++ A +    M    + P V  Y  L+    + 
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
               +A  L E+MV++G+ P+
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPT 323



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 145/307 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++  ++  + K+ R D      + M      P+      ++S LC+  +++    + ++
Sbjct: 115 LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 174

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +R +P V+   +LI  + +  RIE    L K M  K  +   ++Y+ ++    K ++
Sbjct: 175 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 234

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L +A  V+++M++     N   YTT I    + GK++ A  ++  M   G+ P   T++ 
Sbjct: 235 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 294

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  K +R++E+    EQM+++ + P+   +N ++  LC     + A  +      + 
Sbjct: 295 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P  +TY+ L+       ++    +LY EM  K   P    Y +L   L + GK+ EA 
Sbjct: 355 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 414

Query: 324 KYFKIMK 330
           +  + MK
Sbjct: 415 ELMEKMK 421



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 39/296 (13%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-------------------- 158
           M  + +I     ++ +     K   LE    VY+ M++ G                    
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 159 ---------------FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE-TFN 202
                          F   +  Y+T I   C+  ++EEA  L+++M  A   P D  T+ 
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM--ARYAPPDALTYG 118

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++E   K KRI+++L+  E+M +R + P    +N ++  LC+    ++A  +    + +
Sbjct: 119 PIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ 178

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
             +PN +TY+ LI G  K   I+   +L+ EM  K   PT  +Y +LI   C+   L  A
Sbjct: 179 RINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYLC 377
              F  M   + VP V  Y +L+    + G    A  + + MV +G+ P+  +Y C
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 294



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 39/234 (16%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVW--RIYQHMLENIRYPNEATI 61
            E A+++ + +  +G+  + +S+NTLI    K  + DLV    ++  M+ +   PN  T 
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCK--KKDLVAAKDVFDKMVRSNCVPNVVTY 257

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI  L K G++Q   ++LD +  K  +P V   + LI    +  R++E   LL++M+ 
Sbjct: 258 TTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 317

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVV------------------------------- 150
           + +    + Y++++ +  +   LE A  +                               
Sbjct: 318 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDG 377

Query: 151 ----YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
               Y EM+ +G   ++  Y T        GK+ EA  LM++M+     P+  +
Sbjct: 378 AHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPFGRS 431


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 178/398 (44%), Gaps = 38/398 (9%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V   LEQ G    +I++N LI    KS   D   ++   M  N+  P+  T  T++  LC
Sbjct: 114 VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM--NV-APDVVTYNTILRTLC 170

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G+L+  +++LDR   K C P VI  T LI    +E  + + M LL  M  K    D +
Sbjct: 171 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVV 230

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y++++    K   L+ A+     M   G   N   +   + + C  G+  +A  L+ +M
Sbjct: 231 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 290

Query: 190 ENAGLKPYDETFNLLIE---------------------GCA--------------KAKRI 214
              G  P   TFN+LI                      GC               K K++
Sbjct: 291 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 350

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           + ++ Y + M+SR   P    +N ++  LC+ G    A  +L     KG SP  ITY+ +
Sbjct: 351 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 410

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G +K G+ +  +KL  EM  K + P +  Y+SL+S L + GK++EA K+F  ++   +
Sbjct: 411 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 470

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            P    Y S++    +     +A+     M+S+  KP+
Sbjct: 471 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 508



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 172/369 (46%), Gaps = 3/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F     +  RG    +I   +LI    +  +      + + + ++   P+  T   
Sbjct: 73  LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 132

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LIS  CK G++   + +LDR++    +P V+   +++  +    ++++ M +L R L+K 
Sbjct: 133 LISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 189

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++++ A  K   +  A+ + +EM  +G   +   Y   I   C+ G+++EA 
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 249

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             +  M + G +P   T N+++       R  ++      M+ +   PS   FN +I  L
Sbjct: 250 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 309

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A  +L      G +PN ++Y+ L+ G+ KE ++   ++    M  +   P +
Sbjct: 310 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 369

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +L+++LC+ GK++ A +    + S    P +  Y +++    + G   +A+ L +E
Sbjct: 370 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 429

Query: 364 MVSEGLKPS 372
           M  +GLKP 
Sbjct: 430 MRRKGLKPD 438



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 38/339 (11%)

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           L + G+L+     L+ +  +   P +I  TSLI    +  + ++   +++ + +   + D
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE------- 180
            I Y++++    K   +++AL V + M     + +   Y T +   C+ GK++       
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 181 ------------------EANC----------LMQEMENAGLKPYDETFNLLIEGCAKAK 212
                             EA C          L+ EM N G KP   T+N+LI G  K  
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           R++E++ +   M S    P+    N ++R +C  G    A  +L+  L KG SP+ +T++
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            LI    ++G +   + +  +M     +P   +Y  L+   C+  K++ A +Y  IM S 
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              P +  Y +L+    + G    A+ +  ++ S+G  P
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 402



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 132/277 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++I+ N ++  +  + R     ++   ML     P+  T   LI+ LC+ G L   
Sbjct: 259 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 318

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L+++    C+P  +    L+    +E++++  +  L  M+ +    D + Y+ ++ A
Sbjct: 319 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 378

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A+ +  ++  +G S     Y T I    + GK E A  L+ EM   GLKP 
Sbjct: 379 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 438

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ L+ G ++  +++E++ +   +    + P+   +N ++  LC+     +A   L 
Sbjct: 439 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 498

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             + K   P E TY+ LI G A EG  +E L L  E+
Sbjct: 499 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           R+++   +E+G   L+ M+ +  I D I  + ++    ++   + A  V E + + G   
Sbjct: 66  RLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVP 125

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y   I  YC+ G+I+ A   +Q ++   + P   T+N ++     + ++++++   
Sbjct: 126 DVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++ + ++  P    +  +I   C+     QA  +L    +KG  P+ +TY+ LI G  KE
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E +K    M      P +  +  ++ S+C  G+  +A+K    M      P V  +
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     +G   +A+ + E+M   G  P++
Sbjct: 303 NILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 114/233 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A D+   +   G + + +S+N L+H   K  + D        M+    YP+  T  
Sbjct: 314 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 373

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALCK G++   V++L+++  K CSP++I   ++I  + +  + E  + LL  M RK
Sbjct: 374 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 433

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS +V    +   ++ A+  + ++   G   N+  Y + +   C+  + + A
Sbjct: 434 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 493

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              +  M +   KP + T+ +LIEG A     +E+L    ++ SR L+   SA
Sbjct: 494 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 546



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRT 63
           E A  +   + ++G    +I++++L+  +++  + D   + + H LE +   PN  T  +
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF-HDLEGLGIRPNAITYNS 479

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++  LCK  Q    +D L  +  KRC P     T LI  I  E   +E + LL  +  + 
Sbjct: 480 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539

Query: 124 MIHDTIAYSLIV 135
           ++  + A  + V
Sbjct: 540 LVKKSSAEQVAV 551


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 183/372 (49%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   ++A++V   + + G  L++ + N +++ + K  + D V      M +   + +  T
Sbjct: 163 MGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVT 222

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI+A C+ G L    ++++ + GK   P +    ++I  + ++ R      +   ML
Sbjct: 223 YNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEML 282

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  DT  Y+ ++    +  N   A  ++ +ML RG S +   +++ IG     G ++
Sbjct: 283 SIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLD 342

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A    ++M+ +GL P +  + +LI G  +   + E+L   ++M+ +       A+N ++
Sbjct: 343 QALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTIL 402

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+      AN +    +++G  P+  T++ LI G+ KEG + + L L+  M  K+I 
Sbjct: 403 NGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIK 462

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y  LI   C+  ++E+A++ +  M S  + P    Y  LV  +   G  ++A  L
Sbjct: 463 PDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRL 522

Query: 361 CEEMVSEGLKPS 372
            +EM+ +G+KP+
Sbjct: 523 WDEMIRKGIKPT 534



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 172/366 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+V   +  +G   +L ++N +I+ + K  R      ++  ML     P+  T  TL+ 
Sbjct: 239 AFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLV 298

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+        D+   +  +  SP +I  +SLI    +   +++ ++  + M    ++ 
Sbjct: 299 ESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVP 358

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y++++    +   +  AL + ++ML++G + +   Y T +   C+   + +AN L 
Sbjct: 359 DNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALF 418

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+ P   TF  LI G  K   + ++LS    M  + + P    +N +I   C+ 
Sbjct: 419 DEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKT 478

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++AN +    + +   PN I+Y+ L+ GY   G + E  +L+ EM  K I PTL   
Sbjct: 479 TEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTC 538

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            ++I   C+ G L +AD++   M S  + P    Y +L+   ++     KA  L  +M +
Sbjct: 539 NTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMET 598

Query: 367 EGLKPS 372
           +GL+P 
Sbjct: 599 KGLQPD 604



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 180/372 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A D+   +  RG S  LISF++LI V +++   D     ++ M  +   P+      
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  C+ G +   +++ D++  + C+  V+   +++  + +++ + +   L   M+ + 
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D   ++ +++   K  N+  AL ++  M ++    +   Y   I  +C+  ++E+AN
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKAN 485

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM +  + P   ++ +L+ G      + E+    ++M+ + + P+    N +I+  
Sbjct: 486 ELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGY 545

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G+  +A+  L   + +G  P+ ITY+ LI G+ K   + +   L  +ME K + P +
Sbjct: 546 CRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDV 605

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +++  C+ G+++EA+   + M    + P    Y +L+  ++ + N  +A    +E
Sbjct: 606 VTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDE 665

Query: 364 MVSEGLKPSTSY 375
           M+  G  P   +
Sbjct: 666 MLQRGFVPDDDF 677



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 131/270 (48%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI   +Q  ++ EG    K + RK  +    A + ++   VKM  ++ A  VY E+ + G
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSG 180

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              N +     + A C+  KI++    + +ME  G+     T+N LI    +   + E+ 
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                M  + L P+   +N +I  LC+ G   +A G+    L  G SP+  TY+ L+   
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVES 300

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            +     E   ++ +M ++ +SP L +++SLI    + G L++A  YF+ MK+  LVP  
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDN 360

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            IY  L+  +   G  ++AL + ++M+ +G
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQG 390



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/329 (21%), Positives = 140/329 (42%), Gaps = 8/329 (2%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           Y H LEN + PN+       SA      ++  +  L R+  KR S       +LILR+I+
Sbjct: 39  YLHTLENCQNPNQEPTS---SAPPDSFLVEKILLNLRRVRSKRLSDA----QTLILRMIR 91

Query: 106 EERIEEGMVLLKRM-LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
              +    ++   + +      D + + L++ + V+ R L      ++ + ++GF  +  
Sbjct: 92  RSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSIN 151

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
              + +G   + G ++ A  +  E+  +G++    T N+++    K  +I++   +   M
Sbjct: 152 ACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDM 211

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
             + +      +N +I   C  G   +A  ++     KG  P   TY+ +I G  K+G  
Sbjct: 212 EQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRY 271

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
                ++ EM    +SP    Y +L+   C+     EA   F  M    + P +  + SL
Sbjct: 272 VRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSL 331

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +G+    G+  +AL    +M + GL P  
Sbjct: 332 IGVSSRNGHLDQALMYFRDMKTSGLVPDN 360



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%)

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           F+LLI    +A+++ E     + +  +  L S +A N ++  L + G    A  +     
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G   N  T + ++    K+ +I +V     +ME K I   +  Y +LI++ C+ G L 
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLG 237

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           EA +    M    L P +  Y +++    +KG   +A  +  EM+S GL P T+
Sbjct: 238 EAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTT 291


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 163/349 (46%), Gaps = 5/349 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN +I  + K DR +   ++   ML     P++ T   L++ LCK G++    D+  RI
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRN 143
                 P +++  +LI   +   R+++   +L  M+    ++ D   Y+ ++Y   K   
Sbjct: 349 P----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  AL V  +M  +G   N + YT  +  +C+ GKI+EA  ++ EM   GLKP    FN 
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI    K  RI E++    +M  +   P    FN +I  LCE    K A  +L   + +G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              N +TY+ LI  + + GEI+E  KL  EM ++        Y SLI  LC+ G++++A 
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F+ M      P       L+      G   +A+   +EMV  G  P 
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 166/351 (47%), Gaps = 1/351 (0%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDML 81
           ++ FNTLIH      R D    +   M+ +    P+  T  +LI    K G +   +++L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K C P V   T L+    +  +I+E   +L  M    +  +T+ ++ ++ A  K 
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A+ ++ EM ++G   + + + + I   CE  +I+ A  L+++M + G+     T+
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI    +   I+E+     +M+ +        +N +I+ LC  G   +A  +    L 
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G +P+ I+ + LI G  + G ++E ++   EM  +  +P +  + SLI+ LC+ G++E+
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               F+ +++  + P    + +L+    + G    A  L +E + +G  P+
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 150/306 (49%), Gaps = 2/306 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    + ++N+LI+   K     L   +   M      PN  +   L+   CK G++   
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++L+ +      P  +    LI    +E RI E + + + M RK    D   ++ ++  
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++  ++ AL +  +M+  G  AN+  Y T I A+   G+I+EA  L+ EM   G  P 
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPL 562

Query: 198 DE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
           DE T+N LI+G  +A  ++++ S  E+M+     PS  + N +I  LC  G  ++A    
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              + +G +P+ +T++ LI G  + G I++ L ++ +++ + I P    + +L+S LC+ 
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682

Query: 317 GKLEEA 322
           G + +A
Sbjct: 683 GFVYDA 688



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 168/365 (46%), Gaps = 5/365 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA +V   +  R    +L +F  ++      +  D    + + M ++   PN    +TL
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +L K  ++   + +L+ +    C P       +IL + + +RI E   ++ RML +  
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I Y  ++    K+  +++A    +++  R       ++ T I  +  +G++++A  
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374

Query: 185 LMQEMENA-GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           ++ +M  + G+ P   T+N LI G  K   +  +L     M ++   P+  ++  ++   
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +L      G  PN + ++ LI  + KE  I E ++++ EM  K   P +
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             + SLIS LC+  +++ A    + M S  +V     Y +L+   L +G   +A  L  E
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554

Query: 364 MVSEG 368
           MV +G
Sbjct: 555 MVFQG 559



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 5/350 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++ ++   + + +   ++  ML     P   T   ++ A C   ++ + + +L  +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C P  ++  +LI  + +  R+ E + LL+ M     + D   ++ ++    K   +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  +   ML RGF+ +   Y   +   C+ G+++ A  L   +     KP    FN L
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359

Query: 205 IEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           I G     R++++ +    M+ S  ++P    +N +I    + G    A  +L    +KG
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN  +Y+ L+ G+ K G+I E   +  EM    + P    +  LIS+ C+  ++ EA 
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + F+ M      P V  + SL+    E      AL L  +M+SEG+  +T
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 145/311 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L  +A +V   +  +G   ++ S+  L+    K  + D  + +   M  +   PN     
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LISA CK  ++   V++   +  K C P V    SLI  + + + I+  + LL+ M+ +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ +T+ Y+ ++ A ++   ++ A  +  EM+ +G   +   Y + I   C  G++++A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L ++M   G  P + + N+LI G  ++  +EE++ + ++M+ R   P    FN +I  
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G  +    M      +G  P+ +T++ L+    K G + +   L  E       P 
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703

Query: 303 LPAYTSLISSL 313
              ++ L+ S+
Sbjct: 704 HRTWSILLQSI 714


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 2/350 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S+NT++ V+ K  + +    +   M  N   PN  T   L+S  CK G L+    ++D 
Sbjct: 248 VSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDL 307

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P V     LI  + ++ +I+E   L   M    ++ D + Y+ ++       +
Sbjct: 308 MAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSS 367

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
                 + ++M  +G   N+  Y   +  Y + GK++ A   +++ME +G  P   TFN 
Sbjct: 368 SLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNT 427

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  KA R+ E+    ++M  + L  +    N ++  LC       A  +L+ A  +G
Sbjct: 428 LINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA- 322
           +  +E++Y  LI GY K+G+  E +KL+ EM+ K I P++  Y ++I  LC  GK +++ 
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSI 547

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           DK  ++++S  LVP    Y +++  +  +G   KA     +MV +  KP 
Sbjct: 548 DKLNELLES-GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPD 596



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 154/319 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F++   +E +G   + +++N ++    K  + D      + M E+   P+  T  TLI+
Sbjct: 371 GFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLIN 430

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+L     M+D +  K      +   +++  +  E ++++   LL    ++    
Sbjct: 431 GYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFV 490

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y  ++    K      A+ +++EM ++    +   Y T IG  C  GK +++   +
Sbjct: 491 DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            E+  +GL P + T+N +I G  +  ++E++  +  +M+ +   P     N ++R LC  
Sbjct: 551 NELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +    + KG + + +TY+ +I G  KE   +E   L  EME K + P    Y
Sbjct: 611 GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670

Query: 307 TSLISSLCQCGKLEEADKY 325
            +++S+L   G+++EA+++
Sbjct: 671 NAILSALADAGRMKEAEEF 689



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 168/401 (41%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   ++  G   +  +FN L+    K        ++   M +N   P+  T   LI 
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G++     + D +   +  P V+   +LI          +G  L+ +M  K +  
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+++V   VK   +++A     +M + GFS +   + T I  YC+ G++ EA  +M
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445

Query: 187 QEMENAGLKPYDETFNL-----------------------------------LIEGCAKA 211
            EM   GLK    T N                                    LI G  K 
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKD 505

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            +  E++   ++M  ++++PS   +N MI  LC  G   Q+   L   L+ G  P+E TY
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I GY +EG++++  + + +M  KS  P L     L+  LC  G L++A K F    S
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                    Y +++    ++    +A  L  EM  + L P 
Sbjct: 626 KGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPD 666



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 167/358 (46%), Gaps = 11/358 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVW---RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           +L++ NTLI+ + +      V+    I+  +++     N  T   LI   C   +L   +
Sbjct: 173 NLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAI 232

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
            ++ ++    C P  +   +++  + ++ ++ E   LL  M    ++ +   ++++V   
Sbjct: 233 GLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGY 292

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K+  L+ A  V + M +     + + Y   IG  C+ GKI+EA  L  EMEN  L P  
Sbjct: 293 CKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDV 352

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N LI GC       +     ++M  + + P+   +N +++   + G    A   L  
Sbjct: 353 VTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRK 412

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
             + GFSP+ +T++ LI GY K G + E  ++  EM  K +        +++ +LC   K
Sbjct: 413 MEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERK 472

Query: 319 LEEADKYFKIMKSHS----LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L++A   +K++ S S     V  V  Y +L+  + + G   +A+ L +EM  + + PS
Sbjct: 473 LDDA---YKLLSSASKRGYFVDEVS-YGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPS 526



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 143/337 (42%), Gaps = 24/337 (7%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E AF +   + ++G  ++ ++ NT++H +    + D  +++     +   + +E + 
Sbjct: 437 RLSE-AFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSY 495

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI    K G+    + + D +  K   P +I   ++I  +    + ++ +  L  +L 
Sbjct: 496 GTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLE 555

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D   Y+ I+    +   +E A   + +M+K+ F  + F     +   C  G +++
Sbjct: 556 SGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDK 615

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L     + G      T+N +I G  K  R EE+     +M  +KL P C  +N ++ 
Sbjct: 616 ALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILS 675

Query: 242 RLCECGNAKQANGMLTLALDKG-----------------------FSPNEITYSHLIGGY 278
            L + G  K+A   ++  +++G                         PN +T+S  I   
Sbjct: 676 ALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINEL 735

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             +G+ ++ + +  E   K I+     Y SL+  L +
Sbjct: 736 CTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 38/246 (15%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKP---------------------------- 196
           +  T IGAY    +   A  +   M+   LKP                            
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIF 200

Query: 197 ----------YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
                        TFN+LI GC    ++ E++    +M      P   ++N ++  LC+ 
Sbjct: 201 SDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKK 260

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L    + G  PN  T++ L+ GY K G ++E  ++   M   ++ P +  Y
Sbjct: 261 GKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTY 320

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI  LC+ GK++EA +    M++  L+P V  Y +L+    +  +  K   L ++M  
Sbjct: 321 NMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEG 380

Query: 367 EGLKPS 372
           +G+KP+
Sbjct: 381 KGVKPN 386



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 14/210 (6%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF     + ++ F   L + N L+  +      D   +++   +   +  +  T  T+
Sbjct: 579 EKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTI 638

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LCK  + +   D+L  +  K+  P      +++  +    R++E    + R++ +  
Sbjct: 639 ISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGK 698

Query: 125 IHD-TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           + D TI+             L    +       +    NS  ++  I   C  GK ++A 
Sbjct: 699 LQDQTIS-------------LNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAM 745

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
            ++QE    G+  +  T+  L+EG  K ++
Sbjct: 746 HMVQESTQKGITLHKSTYISLMEGLIKRRK 775


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 180/364 (49%), Gaps = 9/364 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M +    PN  +  
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166

Query: 63  TLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            L+  LC   + Q  +++L  +   G  C P V+  T++I    +E  +++       ML
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + ++ + + YS I+ A  K + ++ A+ V   M+K G   N   Y + +  YC  G+ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA   +++M + G++P   T+N L++   K  R  E+    + M  R L P  + +  ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +     G   + +G+L L +  G  PN   +S LI  YAK+G++ + + ++ +M  + ++
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGNKAK 356
           P    Y ++I  LC+ G++E+A +YF+ M    L PG  +Y SL  IH     +K +KAK
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL--IHSLCIFDKWDKAK 464

Query: 357 ALHL 360
              L
Sbjct: 465 DYFL 468



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 162/355 (45%), Gaps = 3/355 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM- 80
           +L ++  LI     + R DL +    ++++     +      L+  LC   +    +D+ 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK--NMIHDTIAYSLIVYAK 138
           L R+    C P V     L+  +  E R +E + LL+ M     +   D ++Y+ ++   
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K  +L+ A   Y EML RG   N   Y++ I A C+   +++A  ++  M   G+ P  
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N ++ G   + + +E++ + ++M S  + P    +N ++  LC+ G   +A  M   
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              +G  P   TY  L+ GYA +G + E+  L   M    I P    ++ LI +  + GK
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +++A   F  M+   L P    Y +++GI  + G    A+   E+M+ E L P  
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 7/366 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE---NIRYPNEATIRTLISALCK 70
           L +RG   S+   N  +  V +      V R Y  M     +   PN  T   LI + C 
Sbjct: 45  LLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTYGILIGSCCC 103

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-VLLKRMLRKNMIHDTI 129
            G+L      L  +  K      I  T L+  +  ++R  + M ++L+RM +   I +  
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV--YTTFIGAYCEYGKIEEANCLMQ 187
           +Y++++         + AL + + M   G      V  YTT I  + + G +++A     
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM + G+ P   T++ +I    KA+ +++++     M+   ++P+C  +N ++   C  G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             K+A G L      G  P+ +TY+ L+    K G   E  K++  M  + + P +  Y 
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +L+      G L E      +M  + + P   ++  L+  + ++G   +A+ +  +M  +
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403

Query: 368 GLKPST 373
           GL P T
Sbjct: 404 GLNPDT 409


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 174/364 (47%), Gaps = 1/364 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L++   S  ++++NT++  +  S +      +    ++   YP+  T   LI A CK   
Sbjct: 203 LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESG 262

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +LD +  K C P V+    LI  I +E R++E +  L  M       + I +++
Sbjct: 263 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNI 322

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +         A     EM+++G S +   +   I   C  G I  A  ++++M   G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   ++N L+    K K++E ++ Y + M+SR   P    +N ++  LC+ G    A 
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 442

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L     KG SP  ITY+ +I G +K G+  + +KL  EM+ K + P +  Y++L+  L
Sbjct: 443 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGL 502

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
            + GK++EA  +F  ++   + P    Y S++    +     +A+     MV+ G KP+ 
Sbjct: 503 SREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTE 562

Query: 373 TSYL 376
           TSY+
Sbjct: 563 TSYM 566



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 177/364 (48%), Gaps = 6/364 (1%)

Query: 12  RYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           ++LE    RG    +I+  +LI  + K+ +     R+ + + ++   P+  T   LIS  
Sbjct: 131 KFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGY 190

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK G++ + + +LDR+     SP V+   +++  +    +++E M +L R +++    D 
Sbjct: 191 CKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDV 247

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           I Y++++ A  K   +  A+ + +EM  +G   +   Y   I   C+ G+++EA   +  
Sbjct: 248 ITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNH 307

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M + G +P   T N+++       R  ++  +  +M+ +   PS   FN +I  LC  G 
Sbjct: 308 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGL 367

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +L      G +PN ++Y+ L+    K+ +++  ++    M  +   P +  Y +
Sbjct: 368 IGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNT 427

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L+++LC+ GK++ A +    + S    P +  Y +++    + G    A+ L +EM  +G
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKG 487

Query: 369 LKPS 372
           LKP 
Sbjct: 488 LKPD 491



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 3/278 (1%)

Query: 96  NTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
           N + + R+++   +EEG   L+ M+ +  I D IA + ++    K      A  V E + 
Sbjct: 113 NNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILE 172

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
             G   +   Y   I  YC+ G+I  A   +Q ++   + P   T+N ++     + +++
Sbjct: 173 DSGAVPDVITYNVLISGYCKTGEIGSA---LQLLDRMSVSPDVVTYNTILRTLCDSGKLK 229

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           E++   ++ M R+  P    +  +I   C+     QA  +L    DKG  P+ +TY+ LI
Sbjct: 230 EAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 289

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  KEG + E ++    M      P +  +  ++ S+C  G+  +A+K+   M      
Sbjct: 290 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 349

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           P V  +  L+     KG   +A+ + E+M   G  P++
Sbjct: 350 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 38/339 (11%)

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           L + G+L+     L+ +  +   P +I  TSLI  + +  +  +   +++ +     + D
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE------- 180
            I Y++++    K   + SAL + + M     S +   Y T +   C+ GK++       
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 181 ------------------EANC----------LMQEMENAGLKPYDETFNLLIEGCAKAK 212
                             EA C          L+ EM + G KP   T+N+LI G  K  
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           R++E++ +   M S    P+    N ++R +C  G    A   L   + KG SP+ +T++
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            LI    ++G I   + +  +M     +P   +Y  L+ +LC+  K+E A +Y  IM S 
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              P +  Y +L+    + G    A+ +  ++ S+G  P
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSP 455



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 115/229 (50%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV   + Q G + + +S+N L+H + K  + +        M+    YP+  T  TL++
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLT 430

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G++   V++L+++  K CSP++I   ++I  + +  + ++ + LL  M  K +  
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS +V    +   ++ A+  + ++ + G   N+  Y + +   C+  +   A   +
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL 550

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             M   G KP + ++ +LIEG A     +E+L    ++ SR ++   SA
Sbjct: 551 AYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 599


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 4/353 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FNT++  + +    D    +  HM E+    +  T  +++  LC  G++   V++L R
Sbjct: 392 VTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSR 451

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C P  I  T+++  +   E+ E    L+  ML  +   D + ++ +V +  +   
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGL 511

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A+ V E+M + G S +   Y   I   C    I++A  L+ ++++ G KP   TFN 
Sbjct: 512 VDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNT 571

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L++G     R E++      MM     P    FN +I  LC+ G   QA   L +  + G
Sbjct: 572 LLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN  TYS ++    K G+ Q  L+L   M     +P L  Y ++IS+L + GK+EEA 
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEAL 689

Query: 324 KYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
              ++M S+ L P    Y SL  G+  E G   +A+ +   +   GL P T++
Sbjct: 690 DLLRVMVSNGLCPDTTTYRSLAYGVCREDGTD-RAVRMLRRVQDTGLSPDTTF 741



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/363 (21%), Positives = 169/363 (46%), Gaps = 8/363 (2%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY----PNEATIRTLISALCKG 71
            RG S S+++++ L+    K       +R    +L+ +R     P+  T   LI+A+C  
Sbjct: 279 HRGCSPSVVTYSILLDATCKESG----YRQAMALLDEMRAKGCEPDIVTYNVLINAMCNE 334

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +   +++L  +    C P  +  T ++  +   ER +E   LL  M   N   D + +
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTF 394

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + IV +  +   ++ A+ V + M + G  A+   Y++ +   C+ G++++A  L+  +++
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G KP    +  +++G    ++ E +     +M+     P    FN ++  LC+ G   +
Sbjct: 455 YGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDR 514

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ++    + G SP+ +TY+ +I G   E  I + ++L  +++     P +  + +L+ 
Sbjct: 515 AIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLK 574

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC   + E+A++    M   +  P    + +++    +KG   +A+   + M   G  P
Sbjct: 575 GLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVP 634

Query: 372 STS 374
           ++S
Sbjct: 635 NSS 637



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/363 (20%), Positives = 159/363 (43%), Gaps = 3/363 (0%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R     G S +++++NT+++   ++ R +   R+   M      P+  T   LI AL
Sbjct: 205 DAERVFAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRAL 261

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C  G++   + + D +  + CSP V+  + L+    +E    + M LL  M  K    D 
Sbjct: 262 CVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDI 321

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y++++ A     +++ AL +   +   G   ++  YT  + + C   + +E   L+ E
Sbjct: 322 VTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAE 381

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M +    P + TFN ++    +   ++ ++   + M     +     ++ ++  LC+ G 
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A  +L+     G  P+ I Y+ ++ G     + +   +L  EM      P    + +
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +++SLCQ G ++ A +  + M  +   P +  Y  ++     +     A+ L  ++ S G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 369 LKP 371
            KP
Sbjct: 562 CKP 564



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 2/303 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FNT++  + +    D   R+ + M EN   P+  T   +I  LC    +   +++L  
Sbjct: 497 VTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSD 556

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C P ++   +L+  +   +R E+   L+  M+R N   D + ++ ++ +  +   
Sbjct: 557 LQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L  A+   + M + G   NS  Y+  + A  + GK + A  L+  M N    P   T+N 
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNT 674

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I    KA ++EE+L     M+S  L P  + +  +   +C      +A  ML    D G
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+   Y+ ++ G+ ++      +  +  M      P    Y  L+ +L   G L+EA 
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAK 794

Query: 324 KYF 326
           +  
Sbjct: 795 RLL 797



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 142/312 (45%), Gaps = 10/312 (3%)

Query: 65  ISALCKGGQLQTYVDMLDRIH---GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           + +L + G++   + + D +    G+ C P+V  N  LI R+  + R+ +   +   +  
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNI-LIKRLCSDGRVSDAERVFAALGP 215

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              +   + Y+ +V    +   +E A  +   M    F  ++F +   I A C  G+I +
Sbjct: 216 SATV---VTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPD 269

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  +M + G  P   T+++L++   K     ++++  ++M ++   P    +N +I 
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +C  G+  +A  +L+     G  P+ +TY+ ++         +EV +L  EM   + +P
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               + ++++SLCQ G ++ A +    M  H  V  +  Y S++    + G    A+ L 
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL 449

Query: 362 EEMVSEGLKPST 373
             + S G KP T
Sbjct: 450 SRLKSYGCKPDT 461



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/335 (19%), Positives = 147/335 (43%), Gaps = 2/335 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   L+  G     I++ T++  +  +++ +    +   ML +   P+E T  T+++
Sbjct: 445 AVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVA 504

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LC+ G +   + +++++    CSP ++    +I  +  E  I++ M LL  +       
Sbjct: 505 SLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP 564

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++     +   E A  +   M++     +   + T I + C+ G + +A   +
Sbjct: 565 DIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETL 624

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G  P   T++++++   KA + + +L     M +    P    +N +I  L + 
Sbjct: 625 KIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT--PDLITYNTVISNLTKA 682

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +L + +  G  P+  TY  L  G  +E      +++   ++   +SP    Y
Sbjct: 683 GKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFY 742

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             ++   C+  + + A   F  M S   +P    Y
Sbjct: 743 NDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTY 777



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 35/192 (18%), Positives = 82/192 (42%), Gaps = 2/192 (1%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A +  + + + G   +  +++ ++  + K+ +      +   M      P+  T  
Sbjct: 616 LLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT--PDLITYN 673

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+IS L K G+++  +D+L  +      P      SL   + +E+  +  + +L+R+   
Sbjct: 674 TVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDT 733

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  DT  Y+ ++    + R  + A+  +  M+  G   +   Y   + A    G ++EA
Sbjct: 734 GLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEA 793

Query: 183 NCLMQEMENAGL 194
             L+  + + G+
Sbjct: 794 KRLLASLCSLGV 805


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 159/363 (43%), Gaps = 40/363 (11%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +Y +M ++  +PN  T   L+ ALC+  ++     MLD +  K C P  +   +++  + 
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           + +R++E   +L  M          +Y+ IV A  +   ++    V  +M+ RG   N  
Sbjct: 206 KLDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            YTT + A+C+ G++  A  ++  M   G  P   TF  L+ G     R+ ++L     M
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           ++    PS  ++N +IR LC  G+ K A+ +L      G  PN  TYS LI G++K G++
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 380

Query: 285 QEVLKLYYEMEYKSISPTLPAYT-----------------------------------SL 309
              + ++ +M      P +  YT                                   +L
Sbjct: 381 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 440

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I SLC C ++  A   F  M+ H  VP    Y  L+     +GN   ALH+  EM S G+
Sbjct: 441 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGI 500

Query: 370 KPS 372
           + S
Sbjct: 501 ELS 503



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 154/328 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++  + +  R   V+ +   M+     PN  T  T++ A CK G+L+    +L R+
Sbjct: 226 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 285

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C+P V+  T+L+  +  + R+ + + + + M+ +     T++Y++++     + +L
Sbjct: 286 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 345

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  +   M + G   N   Y+T I  + + G +  A  +  +M  +G KP    +  +
Sbjct: 346 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 405

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++   K     ++ S  ++M+     P+   FN +IR LC+C    +A G+       G 
Sbjct: 406 VDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC 465

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  TY+ LI G  +EG   + L +  EM+   I  +L  Y +++S LCQ     EA  
Sbjct: 466 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMV 525

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +   M    + P    + +++  + ++G
Sbjct: 526 FVGKMIVQGIQPNAFTFSAIIHAYCKEG 553



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/360 (20%), Positives = 156/360 (43%), Gaps = 5/360 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G     +++ T++ V+ K DR D    +   M      P  A+   ++ ALC+  +
Sbjct: 185 MARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFR 239

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q    ++  + G+   P VI  T+++    +   +     +L RM+      + + ++ 
Sbjct: 240 MQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTA 299

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V        +  AL ++  M+  G++ ++  Y   I   C  G ++ A+ ++  ME  G
Sbjct: 300 LVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHG 359

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T++ LI+G +KA  +  ++S    M      P+   +  M+   C+     QA 
Sbjct: 360 CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAK 419

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++   L +   PN +T++ LI        +   L +++EM      P    Y  LI  L
Sbjct: 420 SLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGL 479

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G   +A      M+SH +   +  Y ++V    +     +A+    +M+ +G++P+ 
Sbjct: 480 FREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNA 539



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 129/305 (42%), Gaps = 5/305 (1%)

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C    +   V + D +      P V     L+  + Q  R+     +L  M RK    D 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y+ IV    K+  L+ A  V   M     S N+ V      A C   +++E   ++ +
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVL-----ALCREFRMQEVFSVVSD 249

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   GL+P   T+  +++   KA  +  + +   +M+     P+   F  ++R L + G 
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A  M    + +G++P+ ++Y+ LI G    G+++    +   ME     P +  Y++
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI    + G L  A   +  M      P V +Y ++V +  +K    +A  L ++M+ E 
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429

Query: 369 LKPST 373
             P+T
Sbjct: 430 CPPNT 434



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 131/311 (42%), Gaps = 45/311 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ R++   G++ S +S+N LI  +           I   M ++  +PN  T  TLI 
Sbjct: 313 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 372

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G L   + + + +    C P V+V T+++    ++    +   L+ +ML +N   
Sbjct: 373 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 432

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC-- 184
           +T+ ++ ++ +    R +  AL V+ EM + G   N   Y   I     +G   E NC  
Sbjct: 433 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI-----HGLFREGNCGD 487

Query: 185 ---LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              ++ EM++ G++    T+N ++ G  + +   E++ +  +M+ + + P+   F+ +I 
Sbjct: 488 ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIH 547

Query: 242 RLCECGNAKQANGMLTLA-----------------------------------LDKGFSP 266
             C+ G  + A  ML                                      L +G  P
Sbjct: 548 AYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYP 607

Query: 267 NEITYSHLIGG 277
           N +T++ L+ G
Sbjct: 608 NTVTWNVLVRG 618


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 169/363 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G    +++FN LIHV+ K        +++  +++    PN  T    I  LC+ G + 
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L+ I  +  +P VI   +LI    +  ++ E    L +M+   +  +   Y+ I+
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +++A  +  + + +GF  + F Y++ I   C  G +  A  +  E    G K
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +N L++G +K   + ++L   + MM     P    +N ++  LC+ G    ANG+
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L  A+ KG  P+  T++ LI GY K+  + + +++   M    I+P +  Y +L++ LC+
Sbjct: 449 LNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCK 508

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
             KL+     FK M      P +  Y  L+    +    ++A+ L +EM + GL P    
Sbjct: 509 ARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVT 568

Query: 376 LCS 378
           LC+
Sbjct: 569 LCT 571



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 172/351 (49%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+ S+N +++++ +        ++Y  M +   YP+  T    + + C  G+    + +L
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLL 169

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + + G+ C    +   ++I    +E    E   L   ML++ +  D + ++ +++   K 
Sbjct: 170 NNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKK 229

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N++ +  ++ +++KRG   N F +  FI   C  G I+EA  L++ + + GL P   ++
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISY 289

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G  K  ++ E+  Y  +M++  + P+   +N +I   C+ G  + A+ +L  A+ 
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KGF P+E TYS LI G   +G++   + ++YE   K    ++  Y +L+  L + G + +
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +  K M  H   P +  Y  +V    + G  + A  +  + +++G  P 
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 168/359 (46%), Gaps = 5/359 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLV-WRIYQH-MLENIRYPNEATIRTLISALCKGGQLQ 75
           G +  +IS+NTLI    K  +  LV    Y H M+ +   PNE T  T+I+  CK G +Q
Sbjct: 281 GLTPDVISYNTLICGFCKHSK--LVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L     K   P     +SLI  +  +  +   M +    + K   H  I Y+ +V
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +  AL + ++M++ G S + + Y   +   C+ G + +AN ++ +    G  
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN LI+G  K + +++++   + M+S  + P    +N ++  LC+          
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L+KG +PN ITY+ LI  + K+ ++ E ++L+ EM+ + ++P +    +LI  LC 
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 316 CGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G+L++A + F  I K +       I+  ++    EK N + A  L  +M      P  
Sbjct: 579 NGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDN 637



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 1/322 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++GF  S+I +NTL+  ++K        ++ + M+E+   P+  T   +++ LCK G L 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L+    K C P +    +LI    ++  +++ + +L  ML   +  D I Y+ ++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K R L++ +  ++ ML++G + N   Y   I ++C+  K+ EA  L +EM+  GL 
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 196 PYDETFNLLIEGCAKAKRIEESLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           P   T   LI G      ++++   +       K   S + FN MI   CE  N   A  
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEK 623

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +         +P+  TY  +I  Y K G I        E   K + P+      +++ LC
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 315 QCGKLEEADKYFKIMKSHSLVP 336
              +L EA     +M  + +VP
Sbjct: 684 VTHRLSEAVVIINLMVQNGIVP 705



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 2/304 (0%)

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G++Q  V++ +R+    C P V    +++  +++     +   +  RM    +  D  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI-GAYCEYGKIEEANCLMQE 188
            +++ + +        +AL +   M  +G   N+  Y   I G Y E  +IE A  L  E
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE-AYHLFDE 206

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G+ P   TFN LI    K   ++ES     ++M R + P+   FN  I+ LC  G 
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +L   + +G +P+ I+Y+ LI G+ K  ++ E     ++M    + P    Y +
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+  C+ G ++ ADK  +       +P    Y SL+      G+  +A+ +  E + +G
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 369 LKPS 372
            K S
Sbjct: 387 FKHS 390



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 1/255 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    + +FNTLI    K    D    I   ML +   P+  T  TL++ LCK  +L  
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            VD    +  K C+P +I    LI    ++ ++ E M L K M  + +  D +    ++ 
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574

Query: 137 AKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                  L+ A  ++  + K   FS ++ ++   I A+CE   +  A  L  +M  +   
Sbjct: 575 GLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCA 634

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P + T+ ++I+   K   I+ + ++  + +S+ L+PS +   +++  LC      +A  +
Sbjct: 635 PDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVI 694

Query: 256 LTLALDKGFSPNEIT 270
           + L +  G  P E+ 
Sbjct: 695 INLMVQNGIVPEEVN 709



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 90/209 (43%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           VY   +  Y   GK++EA  + + M+    +P  +++N ++    +     ++     +M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
               + P        ++  C  G    A  +L     +G   N ++Y  +I G+ KE   
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            E   L+ EM  + I P +  +  LI  LC+ G ++E++K F  +    + P +  +   
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +     KG   +A  L E +VSEGL P  
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDV 286


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 173/362 (47%), Gaps = 4/362 (1%)

Query: 15  EQRGFSL--SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKG 71
           E  GF +   +I++NTLI  + K  R +    + + M    R  PN  T   LI   CK 
Sbjct: 370 ESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKA 429

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             ++   ++ D+++     P V+   +L+  + +  RI   +     M  K +  + + Y
Sbjct: 430 SMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTY 489

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++ A   + N+E A+ +++EML+ G S ++ VY T I    + GK++ A+ ++ +M+ 
Sbjct: 490 TALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE 549

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           AG  P   +FN+LI G  +  +++E+    ++M +  + P    +N +I    + G+   
Sbjct: 550 AGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFST 609

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLI 310
           A+ ++   + +G  P  +TY  LI  Y   G + E +K++ +M   S + P    Y  LI
Sbjct: 610 AHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILI 669

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +SLC+  +++ A      MK   + P  + + ++     EK   +KA  L + M      
Sbjct: 670 NSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACN 729

Query: 371 PS 372
           P 
Sbjct: 730 PD 731



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 7/360 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLEN-----IRYPNEATIRTLISALCKGGQLQT 76
           ++++F  LI+ + K  R D    +++ M        +  P+  T  TLI  LCK G+ + 
Sbjct: 339 NVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE 398

Query: 77  YVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
            + +++R+  + RC P  +    LI    +   IE    L  +M +  +  + +  + +V
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +  A+  + EM  +G   N+  YT  I A+C    IE+A  L  EM  AG  
Sbjct: 459 DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS 518

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  LI G ++A +++ +     +M      P   +FN +I   C      +A  M
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEM 578

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L    + G  P+ +TY+ LI  ++K G+     +L  +M  + + PT+  Y +LI + C 
Sbjct: 579 LKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCL 638

Query: 316 CGKLEEADKYFKIMKSHSLVP-GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            G L+EA K F+ M S S VP    IY  L+     K     AL L ++M  +G+KP+T+
Sbjct: 639 NGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTN 698



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 178/376 (47%), Gaps = 6/376 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+DV   L + G  +   S N L+  + ++     +  +   M E    PN  T   LI+
Sbjct: 289 AWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILIN 348

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCS-----PMVIVNTSLILRIIQEERIEEGMVLLKRML- 120
            LCK  ++   +++ ++++G   +     P VI   +LI  + +  R EEG+ L++RM  
Sbjct: 349 HLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRS 408

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +   + +T+ Y+ ++    K   +E+A  ++++M K G   N     T +   C++G+I 
Sbjct: 409 QPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRIN 468

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A     EM+  GLK    T+  LI        IE+++   ++M+     P    +  +I
Sbjct: 469 GAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLI 528

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L + G   +A+ +L+   + GFSP+ ++++ LI G+ ++ ++ E  ++  EME   I 
Sbjct: 529 SGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIK 588

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y +LIS   + G    A +  K M    LVP V  Y +L+  +   GN  +A+ +
Sbjct: 589 PDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648

Query: 361 CEEMVSEGLKPSTSYL 376
             +M S    P  + +
Sbjct: 649 FRDMSSTSKVPPNTVI 664



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 140/322 (43%), Gaps = 4/322 (1%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A ++   + + G   ++++ NTL+  + K  R +     +  M       N  T  
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI A C    ++  +++ D +    CSP  IV  +LI  + Q  +++    +L +M   
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D +++++++    +   L+ A  + +EM   G   +   Y T I  + + G    A
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS-RKLLPSCSAFNEMIR 241
           + LM++M   GL P   T+  LI        ++E++     M S  K+ P+   +N +I 
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC       A  ++     KG  PN  T++ +  G  ++  + +  +L   M   + +P
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNP 730

Query: 302 ---TLPAYTSLISSLCQCGKLE 320
              T+   T  +S++ +  KL+
Sbjct: 731 DYITMEILTEWLSAVGETAKLK 752



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 152/360 (42%), Gaps = 49/360 (13%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRTLISALCKGGQLQTYVD----- 79
           N LI V+ +  R D    +   ML+      PN  T   + SAL K  ++   VD     
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255

Query: 80  -MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
            ++ +       P  I  T LI R+ +  R +    +L  +++   +             
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGV------------- 302

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
                +E+A            S N+ +  T +G   E+ ++   N L+ EM+   ++P  
Sbjct: 303 -----MEAA------------SCNALL--TALGRAREFKRM---NTLLAEMKEMDIQPNV 340

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMM---SRKLL--PSCSAFNEMIRRLCECGNAKQAN 253
            TF +LI    K +R++E+L   E+M    S   L  P    +N +I  LC+ G  ++  
Sbjct: 341 VTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGL 400

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           G++  +       PN +TY+ LI GY K   I+   +L+ +M    + P +    +L+  
Sbjct: 401 GLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDG 460

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +C+ G++  A ++F  M+   L      Y +L+       N  KA+ L +EM+  G  P 
Sbjct: 461 MCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPD 520



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 110/251 (43%), Gaps = 15/251 (5%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           A +L++    + + ++ + +VY E+        + +    I      G++++A  L+ EM
Sbjct: 161 AATLLIRCFGRAQMVDESFLVYNELCPS--RRLTHIRNILIDVLFRKGRVDDALHLLDEM 218

Query: 190 --ENAGLKPYDETFNLLIEGCAKAKRI------EESLSYCEQMMSRKLLPSCSAFNEMIR 241
               A   P   T +++    +K  ++      EE +    +    ++ P+     ++I 
Sbjct: 219 LQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLIS 278

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           RLC  G   +A  +L   +  G      + + L+    +  E + +  L  EM+   I P
Sbjct: 279 RLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQP 338

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIM---KSHSLV--PGVDIYESLVGIHLEKGNKAK 356
            +  +  LI+ LC+  +++EA + F+ M   +S+  +  P V  Y +L+    + G + +
Sbjct: 339 NVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE 398

Query: 357 ALHLCEEMVSE 367
            L L E M S+
Sbjct: 399 GLGLVERMRSQ 409


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLI 65
           A +V   +   GF   L ++N L   + ++ + D  +++   M   +I  P+  T  TL+
Sbjct: 299 ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLV 358

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A  K  +    +++L+ +  K     ++ +  ++  + +E ++EE +  LK M  + + 
Sbjct: 359 DACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLA 418

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++ A  K RN+  A V+ +EM++ G   ++F   T +   C+  + EEA  L
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 478

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++     G  P + ++  ++    K  + E +L   ++M  RKL PS   +N +I+ LC 
Sbjct: 479 LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCT 538

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G   +A   L   + KG  P++ TY+ +I  Y KEG++++  + + +M      P +  
Sbjct: 539 IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVT 598

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             +L++ LC  GKLE+A K F+          V  Y +L+    + G+   ALH   +M 
Sbjct: 599 CNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADME 658

Query: 366 SEGLKPS 372
           + GL+P 
Sbjct: 659 ARGLQPD 665



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 173/376 (46%), Gaps = 4/376 (1%)

Query: 1   MRLFEVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRN--DLVWRIYQHMLENIRYPN 57
           +RL  +A  +     +RG    SL + N ++  + +S          +++ ++    +PN
Sbjct: 150 LRLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPN 209

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             T   L+   C  G L   +  L  + G   SP V+   +L+    ++  + E   LL 
Sbjct: 210 HYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLA 269

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           RM ++ +      Y+ +V A  ++  ++ A  V E M   GF  + + Y       C+ G
Sbjct: 270 RMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAG 329

Query: 178 KIEEANCLMQEMENAGL-KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           K++EA  L  EME+  +  P   T+N L++ C K +R  ++L+  E+M  + +  S    
Sbjct: 330 KVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTH 389

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +++ LC  G  ++A G L +  ++G +P+ ITY+ LI  Y K   + +   L  EM  
Sbjct: 390 NIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             +        +L+ +LC+  + EEA++  +       VP    Y +++  + ++     
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509

Query: 357 ALHLCEEMVSEGLKPS 372
           AL+L +EM    L PS
Sbjct: 510 ALYLWDEMSKRKLTPS 525



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 7/247 (2%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++L+V+       L  AL     M   G S +   Y T + A+C  G + EA  L+  M+
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G+ P   T+N L+   A+   I+++ +  E M +    P    +N +   LC+ G   
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 251 QA----NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           +A    + M  L++    SP+ +TY+ L+    K     + L L  EM  K +  +L  +
Sbjct: 333 EAFKLKDEMEHLSI---VSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTH 389

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             ++  LC+ G+LEEA    K+M    L P V  Y +L+  + +  N AKA  L +EMV 
Sbjct: 390 NIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449

Query: 367 EGLKPST 373
            GLK  T
Sbjct: 450 SGLKMDT 456



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 147/319 (46%), Gaps = 5/319 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + + G  +   + NTL++ + K  R +    + +   +    P+E +  T+++
Sbjct: 440 AFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMA 499

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K  + +  + + D +  ++ +P +    +LI  +    ++ E +  L  +++K ++ 
Sbjct: 500 AYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVP 559

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++I++A  K  +LE A   + +ML+  F  +     T +   C +GK+E+A  L 
Sbjct: 560 DDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLF 619

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +     G K    T+N LI+   K   ++ +L +   M +R L P    +N ++  L E 
Sbjct: 620 ESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEA 679

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE---GEIQEVLKLYYEMEYKSISPTL 303
           G +++A  ML    + G      +Y  LI   A+E   G+  EV K   E    +     
Sbjct: 680 GRSEEAQNMLHKLDESGKLSERFSYP-LIKSSAEEVKTGKDPEV-KSDCESGGNAKGGDQ 737

Query: 304 PAYTSLISSLCQCGKLEEA 322
            +Y   +  LC  G+L+EA
Sbjct: 738 ESYNKSVKELCVGGQLKEA 756



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 133/318 (41%), Gaps = 36/318 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A ++ R   QRGF    +S+ T++    K ++ +    ++  M +    P+  T  T
Sbjct: 472 YEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNT 531

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D L+ +  K   P       +I    +E  +E+      +ML   
Sbjct: 532 LIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENY 591

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D +  + ++        LE A+ ++E   ++G   +   Y T I A C+ G ++ A 
Sbjct: 592 FKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTAL 651

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM---------MSRKLLPSCS 234
               +ME  GL+P   T+N+++   ++A R EE+ +   ++          S  L+ S +
Sbjct: 652 HFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSA 711

Query: 235 ---------------------------AFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                                      ++N+ ++ LC  G  K+A  +L   + KG S +
Sbjct: 712 EEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVD 771

Query: 268 EITYSHLIGGYAKEGEIQ 285
             TY  L+ G  K  + Q
Sbjct: 772 SSTYITLMEGLIKRQKRQ 789



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/292 (19%), Positives = 125/292 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A    + + + G +  +I++NTLI    K+      + +   M+ +    +  T+ T
Sbjct: 402 LEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNT 461

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LCK  + +   ++L     +   P  +   +++    +E + E  + L   M ++ 
Sbjct: 462 LLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRK 521

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +      Y+ ++     +  L  A+    E++K+G   +   Y   I AYC+ G +E+A 
Sbjct: 522 LTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAF 581

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
               +M     KP   T N L+ G     ++E+++   E    +        +N +I+ L
Sbjct: 582 QFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQAL 641

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           C+ G+   A         +G  P+  TY+ ++   ++ G  +E   + ++++
Sbjct: 642 CKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLD 693


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 178/398 (44%), Gaps = 38/398 (9%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V   LEQ G    +I++N LI    KS   D   ++   M  N+  P+  T  T++  LC
Sbjct: 171 VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM--NV-APDVVTYNTILRTLC 227

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G+L+  +++LDR   K C P VI  T LI    +E  + + M LL  M  K    D +
Sbjct: 228 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVV 287

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y++++    K   L+ A+     M   G   N   +   + + C  G+  +A  L+ +M
Sbjct: 288 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 347

Query: 190 ENAGLKPYDETFNLLIE---------------------GCA--------------KAKRI 214
              G  P   TFN+LI                      GC               K K++
Sbjct: 348 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 407

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           + ++ Y + M+SR   P    +N ++  LC+ G    A  +L     KG SP  ITY+ +
Sbjct: 408 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 467

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G +K G+ +  +KL  EM  K + P +  Y+SL+S L + GK++EA K+F  ++   +
Sbjct: 468 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 527

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            P    Y S++    +     +A+     M+S+  KP+
Sbjct: 528 RPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPT 565



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 172/369 (46%), Gaps = 3/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F     +  RG    +I   +LI    +  +      + + + ++   P+  T   
Sbjct: 130 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 189

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LIS  CK G++   + +LDR++    +P V+   +++  +    ++++ M +L R L+K 
Sbjct: 190 LISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 246

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++++ A  K   +  A+ + +EM  +G   +   Y   I   C+ G+++EA 
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 306

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             +  M + G +P   T N+++       R  ++      M+ +   PS   FN +I  L
Sbjct: 307 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 366

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A  +L      G +PN ++Y+ L+ G+ KE ++   ++    M  +   P +
Sbjct: 367 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 426

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +L+++LC+ GK++ A +    + S    P +  Y +++    + G   +A+ L +E
Sbjct: 427 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 486

Query: 364 MVSEGLKPS 372
           M  +GLKP 
Sbjct: 487 MRRKGLKPD 495



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 38/339 (11%)

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           L + G+L+     L+ +  +   P +I  TSLI    +  + ++   +++ + +   + D
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE------- 180
            I Y++++    K   +++AL V + M     + +   Y T +   C+ GK++       
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 181 ------------------EANC----------LMQEMENAGLKPYDETFNLLIEGCAKAK 212
                             EA C          L+ EM N G KP   T+N+LI G  K  
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           R++E++ +   M S    P+    N ++R +C  G    A  +L+  L KG SP+ +T++
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            LI    ++G +   + +  +M     +P   +Y  L+   C+  K++ A +Y  IM S 
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              P +  Y +L+    + G    A+ +  ++ S+G  P
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSP 459



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 132/277 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++I+ N ++  +  + R     ++   ML     P+  T   LI+ LC+ G L   
Sbjct: 316 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 375

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L+++    C+P  +    L+    +E++++  +  L  M+ +    D + Y+ ++ A
Sbjct: 376 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 435

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A+ +  ++  +G S     Y T I    + GK E A  L+ EM   GLKP 
Sbjct: 436 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 495

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ L+ G ++  +++E++ +   +    + P+   +N ++  LC+     +A   L 
Sbjct: 496 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 555

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             + K   P E TY+ LI G A EG  +E L L  E+
Sbjct: 556 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           R+++   +E+G   L+ M+ +  I D I  + ++    ++   + A  V E + + G   
Sbjct: 123 RLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVP 182

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y   I  YC+ G+I+ A   +Q ++   + P   T+N ++     + ++++++   
Sbjct: 183 DVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 239

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++ + ++  P    +  +I   C+     QA  +L    +KG  P+ +TY+ LI G  KE
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E +K    M      P +  +  ++ S+C  G+  +A+K    M      P V  +
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     +G   +A+ + E+M   G  P++
Sbjct: 360 NILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 114/233 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A D+   +   G + + +S+N L+H   K  + D        M+    YP+  T  
Sbjct: 371 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 430

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALCK G++   V++L+++  K CSP++I   ++I  + +  + E  + LL  M RK
Sbjct: 431 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 490

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS +V    +   ++ A+  + ++   G   N+  Y + +   C+  + + A
Sbjct: 491 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 550

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              +  M +   KP + T+ +LIEG A     +E+L    ++ SR L+   SA
Sbjct: 551 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 603



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRT 63
           E A  +   + ++G    +I++++L+  +++  + D   + + H LE +   PN  T  +
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF-HDLEGLGIRPNAITYNS 536

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++  LCK  Q    +D L  +  KRC P     T LI  I  E   +E + LL  +  + 
Sbjct: 537 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596

Query: 124 MIHDTIAYSLIV 135
           ++  + A  + V
Sbjct: 597 LVKKSSAEQVAV 608


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 174/357 (48%), Gaps = 1/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G  ++  + + L++ + K  + +    I +   EN    +E    T ++  C+ G + 
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  ++R+      P  I   SLI +    + +++    +K+M  K +      Y+ ++
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K+   +    + E+M + G   N   Y + I   C+ GKI EA  ++++M   G+ 
Sbjct: 464 DGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVL 523

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  + +N+LI+G     +++++L + ++MM  ++ P+   +N +I  LC+ G   +A   
Sbjct: 524 PNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDF 583

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           LT     G SP+ ITY+ LI GYA  G + + L LY  M+   I PT+  Y  LIS  C 
Sbjct: 584 LTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CS 642

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              +E  +K +  M   +L+P   +Y +++  + E GN  KA  L + M+ +G+ P 
Sbjct: 643 KEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPD 699



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 181/386 (46%), Gaps = 35/386 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ------ 75
           S++++NTLI    K    D  +++ + M E    PN  T  +L+S LCK  +++      
Sbjct: 245 SIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLL 304

Query: 76  -------------TYVDMLD------------RIHGKRCSPMVIVNT---SLILR-IIQE 106
                        TY  + D             ++ +     + +N    S++L  + ++
Sbjct: 305 KEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQ 364

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
            ++E+   +LK+     ++ D + Y+  V    ++ ++  A++  E M   G   NS  +
Sbjct: 365 GKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITF 424

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
            + I  +C+  ++++A   +++M   G+ P  ET+N LI+G  K    +      EQM  
Sbjct: 425 NSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEE 484

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
             + P+  ++  +I  LC+ G   +A  +L   + +G  PN   Y+ LI G    G++++
Sbjct: 485 IGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            L+ + EM    ISPTL  Y  LI  LC+ GKL EA+ +   + S    P V  Y SL+ 
Sbjct: 545 ALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLIS 604

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
            +   GN +K L L E M + G+KP+
Sbjct: 605 GYANAGNVSKCLGLYETMKNLGIKPT 630



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 169/359 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG   ++  +N LI  + +  R     +++  M       +  T  TLI   CK G+
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     M +R+  K  +P +I   SL+  + +  +++E   LLK M     + D   YS+
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +    ++  +   A+ +YE+  ++G   N++  +  +   C+ GK+E+A  ++++    G
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENG 381

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L   +  +N  + G  +   + +++   E+M S  L P+   FN +I + C+     +A 
Sbjct: 382 LVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAE 441

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +    +KG +P+  TY+ LI GY K        ++  +ME   + P + +Y SLI+ L
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCL 501

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ GK+ EA+   + M    ++P   +Y  L+      G    AL   +EM+   + P+
Sbjct: 502 CKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPT 560



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 170/369 (46%), Gaps = 1/369 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+  + A +  + + ++G + S+ ++NTLI    K    D  ++I + M E    PN  +
Sbjct: 434 MKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVS 493

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +LI+ LCK G++     +L  +  +   P   V   LI       ++++ +     M+
Sbjct: 494 YGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R  +    + Y++++    K   L  A     ++   G S +   Y + I  Y   G + 
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVS 613

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +   L + M+N G+KP   T++ LI GC+K + IE       +M+   LLP    +N MI
Sbjct: 614 KCLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMI 672

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               E GN ++A  +    LD+G  P+++TY+ LI G+ +EG++  +  L   M+ K ++
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y  L+   C       A  +++ M  ++ +P   I   L     ++G   +   +
Sbjct: 733 PKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVI 792

Query: 361 CEEMVSEGL 369
           C EM  +G+
Sbjct: 793 CSEMNVKGI 801



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT  Y+  + A VK++NL+  +   + M KRG   N F+Y   IG  C   +I +A  + 
Sbjct: 175 DTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMF 234

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM N  L     T+N LI+G  K   ++ +    E+M  + + P+   FN ++  LC+ 
Sbjct: 235 DEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKM 294

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+A  +L      GF P+  TYS L  G  +  +    ++LY +   K I       
Sbjct: 295 RKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTG 354

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L++ LC+ GK+E+A++  K    + LV    IY + V  +   G+  KA+   E M S
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414

Query: 367 EGLKPST 373
            GL+P++
Sbjct: 415 FGLRPNS 421



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 148/318 (46%)

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A  K   L+  ++ LD +  +   P V +   LI  + +E+RI +   +   M   N+
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINL 242

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           +   + Y+ ++    K+  L++A  + E M ++  + N   + + +   C+  K++EA  
Sbjct: 243 VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARS 302

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++EME  G  P   T+++L +G  +      ++   EQ   + +  +    + ++  LC
Sbjct: 303 LLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLC 362

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +L    + G   +E+ Y+  + GY + G++ + +     ME   + P   
Sbjct: 363 KQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSI 422

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + SLI   C   ++++A+++ K M    + P V+ Y +L+  + +     +   + E+M
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482

Query: 365 VSEGLKPSTSYLCSASTC 382
              G+KP+     S   C
Sbjct: 483 EEIGVKPNVVSYGSLINC 500



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 163/371 (43%), Gaps = 8/371 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G   + I+FN+LI         D      + M E    P+  T  TLI    K   
Sbjct: 412 MESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT 471

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                 +L+++      P V+   SLI  + ++ +I E  ++L+ M+ + ++ +   Y++
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNM 531

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +  ++ AL  ++EM++   S     Y   I   C+ GK+ EA   + ++ ++G
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG---NAK 250
             P   T+N LI G A A  + + L   E M +  + P+   ++ +I    + G     K
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEK 651

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             N ML + L     P+ + Y+ +I  YA+ G  Q+   L+  M  + I P    Y SLI
Sbjct: 652 LYNEMLQMNL----LPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLI 707

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
               + GKL         MK+  L P  D Y+ LV  H +  + + A     EMV     
Sbjct: 708 LGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFL 767

Query: 371 PSTSYLCSAST 381
           P+ S +C+  T
Sbjct: 768 PNAS-ICNELT 777


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 169/357 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G    ++++N LI+   K  R +  +  +  M       N  T  T + A CK G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +  ++  +  +      T LI    +  R+++ +VLL  M+R+ +  + + Y++
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K R +  A  V   M K G  AN  +YTT I  +      E+A  L+ EM+N G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+     +  LI+G     +++E+ S   +M    L P+   +  M+    + G   +A 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ML   LD GF PN ITY  LI G  K G I E +  + +M    + P + AYT+L+  L
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C+ G L EA + F  M    +     +Y +L+  +L++GN   A  L  +M+  GL+
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 165/348 (47%), Gaps = 1/348 (0%)

Query: 31  HVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCS 90
           H++ +  R D   R+ + + E +  PN  T   +I  LCK G+L     +  R+    C 
Sbjct: 162 HILLRLAR-DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCL 220

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+   SLI    +   ++E   L++ M R     D + Y+ ++    K   +E+A   
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           +  M + G  AN   ++TF+ A+C+ G + EA  L  +M   G+   + T+  LI+G  K
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           A R+++++   ++M+ + +  +   +  ++  LC+     +A  +L +    G   NE+ 
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI G+      ++ L L  EM+ K +   +  Y +LI  LC   KL+EA      M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
              L P   IY +++    + G   +A+ + ++++  G +P+    C+
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 2/358 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG +L+  ++  LI    K+ R D    +   M+      N  T   L+  LCK  ++  
Sbjct: 322 RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAE 381

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+L  +         ++ T+LI      +  E+ + LL  M  K +  D   Y  ++ 
Sbjct: 382 AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
               +  L+ A  +  +M + G   N  +YTT + A  + GK+ EA  ++Q++ ++G +P
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  LI+G  KA  I+E++S+  +M    L P+  A+  ++  LC+ G   +A  + 
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLF 561

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              + KG S +++ Y+ L+ GY K+G + +   L  +M    +   L  YT  IS  C  
Sbjct: 562 NEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + EA + F  M  H + P   +Y  L+  + + GN  +A+ L +EM  E + PS +
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERVLPSCT 677



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 165/383 (43%), Gaps = 35/383 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++ +FN +I  + K         ++  M E    P+  T  +LI    K G+L     ++
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLV 246

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +    C   V+   +LI    +  R+E        M R+ ++ + + +S  V A  K 
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKE 306

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A+ ++ +M  RG + N F YT  I   C+ G++++A  L+ EM   G+     T+
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366

Query: 202 NLLIEGCAKAKRI-----------------------------------EESLSYCEQMMS 226
            +L++G  K +++                                   E++L    +M +
Sbjct: 367 TVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           + L    S +  +I+ LC      +A  +LT   + G  PN I Y+ ++    K G++ E
Sbjct: 427 KGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            + +  ++      P +  Y +LI  LC+ G ++EA  +F  M+   L P V  Y +LV 
Sbjct: 487 AIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVD 546

Query: 347 IHLEKGNKAKALHLCEEMVSEGL 369
              + G   +A+ L  EMV +G+
Sbjct: 547 GLCKNGCLNEAVQLFNEMVHKGM 569



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 4/316 (1%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           + + TL+S L   G L   V  + R+   R  P       ++LR+ ++        L++R
Sbjct: 123 SVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGR----LVRR 178

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           +  +    +   +++++    K   L  A  ++  M + G   +   + + I  Y + G+
Sbjct: 179 LFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++E   L++EM  +G K    T+N LI    K  R+E +  Y   M    ++ +   F+ 
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            +   C+ G  ++A  +      +G + NE TY+ LI G  K G + + + L  EM  + 
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +   +  YT L+  LC+  K+ EA+   ++M+   +     +Y +L+  H    N  KAL
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKAL 418

Query: 359 HLCEEMVSEGLKPSTS 374
            L  EM ++GL+   S
Sbjct: 419 GLLSEMKNKGLELDIS 434



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 122/289 (42%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV R +E+ G   + + + TLIH    +  ++    +   M       + +    LI 
Sbjct: 382 AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC   +L     +L ++      P  I+ T+++    +  ++ E + +L+++L      
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y  ++    K  +++ A+  + +M   G   N   YT  +   C+ G + EA  L 
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLF 561

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      +  L++G  K   + ++ +   +M+   L      +   I   C  
Sbjct: 562 NEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
               +A  + +  +  G +P+   Y+ LI  Y K G ++E + L  EME
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 169/363 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G    +++FN LIHV+ K        +++  +++    PN  T    I  LC+ G + 
Sbjct: 209 KQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L+ I  +  +P VI   +LI    +  ++ E    L +M+   +  +   Y+ I+
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +++A  +  + + +GF  + F Y++ I   C  G +  A  +  E    G K
Sbjct: 329 NGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFK 388

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +N L++G +K   + ++L   + MM     P    +N ++  LC+ G    ANG+
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L  A+ KG  P+  T++ LI GY K+  + + +++   M    I+P +  Y +L++ LC+
Sbjct: 449 LNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCK 508

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
             KL+     FK M      P +  Y  L+    +    ++A+ L +EM + GL P    
Sbjct: 509 ARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVT 568

Query: 376 LCS 378
           LC+
Sbjct: 569 LCT 571



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 172/351 (49%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+ S+N +++++ +        ++Y  M +   YP+  T    + + C  G+    + +L
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLL 169

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + + G+ C    +   ++I    +E    E   L   ML++ +  D + ++ +++   K 
Sbjct: 170 NNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKK 229

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N++ +  ++ +++KRG   N F +  FI   C  G I+EA  L++ + + GL P   ++
Sbjct: 230 GNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISY 289

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G  K  ++ E+  Y  +M++  + P+   +N +I   C+ G  + A+ +L  A+ 
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KGF P+E TYS LI G   +G++   + ++YE   K    ++  Y +L+  L + G + +
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +  K M  H   P +  Y  +V    + G  + A  +  + +++G  P 
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 167/359 (46%), Gaps = 5/359 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLV-WRIYQH-MLENIRYPNEATIRTLISALCKGGQLQ 75
           G +  +IS+NTLI    K  +  LV    Y H M+ +   PNE T  T+I+  CK G +Q
Sbjct: 281 GLTPDVISYNTLICGFCKHSK--LVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQ 338

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L     K   P     +SLI  +  +  +   M +    + K   H  I Y+ +V
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +  AL + ++M++ G S + + Y   +   C+ G + +AN ++ +    G  
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN LI+G  K + +++++   + M+S  + P    +N ++  LC+          
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L+KG +PN ITY+ LI  + K+ ++ E ++L+ EM+ + ++P +    +LI  LC 
Sbjct: 519 FKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 316 CGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G+L++A + F  I K +       I+  ++     K N + A  L  +M      P  
Sbjct: 579 NGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDN 637



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 1/322 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++GF  S+I +NTL+  ++K        ++ + M+E+   P+  T   +++ LCK G L 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L+    K C P +    +LI    ++  +++ + +L  ML   +  D I Y+ ++
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K R L++ +  ++ ML++G + N   Y   I ++C+  K+ EA  L +EM+  GL 
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563

Query: 196 PYDETFNLLIEGCAKAKRIEESLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           P   T   LI G      ++++   +       K   S + FN MI   C   N   A  
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEK 623

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +         +P+  TY  +I  Y K G I        E   K + P+      +++ LC
Sbjct: 624 LFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 315 QCGKLEEADKYFKIMKSHSLVP 336
              +L EA     +M  + +VP
Sbjct: 684 VTHRLSEAVVIINLMVQNGIVP 705



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 138/304 (45%), Gaps = 2/304 (0%)

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G++Q  V++ +R+    C P V    +++  +++     +   +  RM    +  D  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI-GAYCEYGKIEEANCLMQE 188
            +++ + +        +AL +   M  +G   N+  Y   I G Y E  +IE A  L  E
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE-AYHLFDE 206

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G+ P   TFN LI    K   ++ES     ++M R + P+   FN  I+ LC  G 
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +L   + +G +P+ I+Y+ LI G+ K  ++ E     ++M    + P    Y +
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+  C+ G ++ ADK  +       +P    Y SL+      G+  +A+ +  E + +G
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 369 LKPS 372
            K S
Sbjct: 387 FKHS 390



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 1/255 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    + +FNTLI    K    D    I   ML +   P+  T  TL++ LCK  +L  
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            VD    +  K C+P +I    LI    ++ ++ E M L K M  + +  D +    ++ 
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574

Query: 137 AKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                  L+ A  ++  + K   FS ++ ++   I A+C    +  A  L  +M  +   
Sbjct: 575 GLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCA 634

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P + T+ ++I+   K   I+ + ++  + +S+ L+PS +   +++  LC      +A  +
Sbjct: 635 PDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVI 694

Query: 256 LTLALDKGFSPNEIT 270
           + L +  G  P E+ 
Sbjct: 695 INLMVQNGIVPEEVN 709



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 90/209 (43%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           VY   +  Y   GK++EA  + + M+    +P  +++N ++    +     ++     +M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
               + P        ++  C  G    A  +L     +G   N ++Y  +I G+ KE   
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            E   L+ EM  + I P +  +  LI  LC+ G ++E++K F  +    + P +  +   
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +     KG   +A  L E +VSEGL P  
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDV 286


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 169/357 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G    ++++N LI+   K  R +  +  +  M       N  T  T + A CK G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +  ++  +  +      T LI    +  R+++ +VLL  M+R+ +  + + Y++
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K R +  A  V   M K G  AN  +YTT I  +      E+A  L+ EM+N G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+     +  LI+G     +++E+ S   +M    L P+   +  M+    + G   +A 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ML   LD GF PN ITY  LI G  K G I E +  + +M    + P + AYT+L+  L
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C+ G L EA + F  M    +     +Y +L+  +L++GN   A  L  +M+  GL+
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 165/348 (47%), Gaps = 1/348 (0%)

Query: 31  HVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCS 90
           H++ +  R D   R+ + + E +  PN  T   +I  LCK G+L     +  R+    C 
Sbjct: 162 HILLRLAR-DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCL 220

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+   SLI    +   ++E   L++ M R     D + Y+ ++    K   +E+A   
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           +  M + G  AN   ++TF+ A+C+ G + EA  L  +M   G+   + T+  LI+G  K
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           A R+++++   ++M+ + +  +   +  ++  LC+     +A  +L +    G   NE+ 
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI G+      ++ L L  EM+ K +   +  Y +LI  LC   KL+EA      M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
              L P   IY +++    + G   +A+ + ++++  G +P+    C+
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 2/358 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG +L+  ++  LI    K+ R D    +   M+      N  T   L+  LCK  ++  
Sbjct: 322 RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAE 381

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+L  +         ++ T+LI      +  E+ + LL  M  K +  D   Y  ++ 
Sbjct: 382 AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
               +  L+ A  +  +M + G   N  +YTT + A  + GK+ EA  ++Q++ ++G +P
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  LI+G  KA  I+E++S+  +M    L P+  A+  ++  LC+ G   +A  + 
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLF 561

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              + KG S +++ Y+ L+ GY K+G + +   L  +M    +   L  YT  IS  C  
Sbjct: 562 NEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + EA + F  M  H + P   +Y  L+  + + GN  +A+ L +EM  E + PS +
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERVLPSCT 677



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 165/383 (43%), Gaps = 35/383 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++ +FN +I  + K         ++  M E    P+  T  +LI    K G+L     ++
Sbjct: 187 NVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLV 246

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +    C   V+   +LI    +  R+E        M R+ ++ + + +S  V A  K 
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKE 306

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A+ ++ +M  RG + N F YT  I   C+ G++++A  L+ EM   G+     T+
Sbjct: 307 GLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTY 366

Query: 202 NLLIEGCAKAKRI-----------------------------------EESLSYCEQMMS 226
            +L++G  K +++                                   E++L    +M +
Sbjct: 367 TVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKN 426

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           + L    S +  +I+ LC      +A  +LT   + G  PN I Y+ ++    K G++ E
Sbjct: 427 KGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPE 486

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            + +  ++      P +  Y +LI  LC+ G ++EA  +F  M+   L P V  Y +LV 
Sbjct: 487 AIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVD 546

Query: 347 IHLEKGNKAKALHLCEEMVSEGL 369
              + G   +A+ L  EMV +G+
Sbjct: 547 GLCKNGCLNEAVQLFNEMVHKGM 569



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 4/316 (1%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           + + TL+S L   G L   V  + R+   R  P       ++LR+ ++        L++R
Sbjct: 123 SVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGR----LVRR 178

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           +  +    +   +++++    K   L  A  ++  M + G   +   + + I  Y + G+
Sbjct: 179 LFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++E   L++EM  +G K    T+N LI    K  R+E +  Y   M    ++ +   F+ 
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            +   C+ G  ++A  +      +G + NE TY+ LI G  K G + + + L  EM  + 
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +   +  YT L+  LC+  K+ EA+   ++M+   +     +Y +L+  H    N  KAL
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKAL 418

Query: 359 HLCEEMVSEGLKPSTS 374
            L  EM ++GL+   S
Sbjct: 419 GLLSEMKNKGLELDIS 434



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 122/289 (42%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV R +E+ G   + + + TLIH    +  ++    +   M       + +    LI 
Sbjct: 382 AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC   +L     +L ++      P  I+ T+++    +  ++ E + +L+++L      
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y  ++    K  +++ A+  + +M   G   N   YT  +   C+ G + EA  L 
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLF 561

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      +  L++G  K   + ++ +   +M+   L      +   I   C  
Sbjct: 562 NEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
               +A  + +  +  G +P+   Y+ LI  Y K G ++E + L  EME
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 181/357 (50%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++++F+TLI  + ++   + V  ++  M E+   P+     T+I  +CK  +L+  
Sbjct: 247 GCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVA 306

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L+R+     SP V+   +L+  +   +R EE   LL  M  K+   D + ++++V  
Sbjct: 307 RGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDF 366

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +   ++  + V E+ML+ G   +   YTT I  +C+ G I+EA  L++ M   G +P 
Sbjct: 367 LCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPN 426

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++ ++++G   A+R  ++     QM+ +   P+   FN +I  LC+ G  +QA  +L 
Sbjct: 427 TVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 486

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L  G SP+ I+YS +I G  K G   E L+L   M  K +SP    Y+S+ S+L   G
Sbjct: 487 QMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEG 546

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           ++ +  + F+ ++  ++     +Y +++    ++G   +A+     MVS G  P+ S
Sbjct: 547 RINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNES 603



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 159/371 (42%), Gaps = 1/371 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIR 62
           F  A  V R L  RG +L + + N ++  V      D   R+ + +L +    P+  +  
Sbjct: 162 FRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYN 221

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            ++  LC   +     D+++ +    C P ++  ++LI  + +    E    +  +M   
Sbjct: 222 AVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEH 281

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D   Y+ I+    K   LE A  +   M   G S N   Y T +   C   + EEA
Sbjct: 282 GCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEA 341

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+ EM +      D TFN+L++   +   ++  +   EQM+    +P    +  +I  
Sbjct: 342 EGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVING 401

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G   +A  +L      G  PN ++Y+ ++ G        +  +L  +M  +   P 
Sbjct: 402 FCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPN 461

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              + +LI+ LC+ G +E+A +  K M  +   P +  Y +++    + GN  +AL L  
Sbjct: 462 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLN 521

Query: 363 EMVSEGLKPST 373
            MV +G+ P+T
Sbjct: 522 VMVKKGMSPNT 532



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/388 (21%), Positives = 152/388 (39%), Gaps = 71/388 (18%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSP------------------------ 91
           PN  T   L+ ALC  G++   + +LD +  + C+P                        
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 92  ----------MVIVNTSLILRIIQEE-RIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKV 139
                     + + N +L+L+ + ++  ++E + LL+ +L       D ++Y+ ++    
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
             R       + EEM+  G   N   ++T IG  C  G  E  + +  +M   G  P   
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            +  +I+G  K +R+E +     +M S  L P+   +N +++ LC     ++A G+L   
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 260 LDK-----------------------------------GFSPNEITYSHLIGGYAKEGEI 284
            DK                                   G  P+ ITY+ +I G+ KEG I
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            E + L   M      P   +YT ++  LC   +  +A++    M      P    + +L
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +    +KG   +A+ L ++M+  G  P 
Sbjct: 469 INFLCKKGLVEQAIELLKQMLVNGCSPD 496



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/312 (20%), Positives = 132/312 (42%), Gaps = 6/312 (1%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +++  C+ GQL     +   +     +P       L+  +    RI + + +L  M R+
Sbjct: 84  AMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMARR 140

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y + + A  +      A+ V  ++  RG + +       + A C+ G ++EA
Sbjct: 141 GCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEA 200

Query: 183 NCLMQE-MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
             L+++ + + G +P   ++N ++ G   A+R        E+M++    P+   F+ +I 
Sbjct: 201 VRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIG 260

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC  G  ++ + +     + G +P+   Y+ +I G  KE  ++    +   M    +SP
Sbjct: 261 HLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSP 320

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI-YESLVGIHLEKGNKAKALHL 360
            +  Y +L+  LC   + EEA+     M      P  D+ +  LV    + G   + + +
Sbjct: 321 NVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD-CPLDDVTFNILVDFLCQNGLVDRVIEV 379

Query: 361 CEEMVSEGLKPS 372
            E+M+  G  P 
Sbjct: 380 LEQMLEHGCMPD 391



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 110/228 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A  + R +   G   + +S+  ++  +  ++R      +   M++    PN  T  
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G ++  +++L ++    CSP +I  +++I  + +    +E + LL  M++K
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKK 526

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            M  +TI YS I  A      +   + ++E +      +++ +Y   I + C+ G+ + A
Sbjct: 527 GMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRA 586

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
              +  M ++G  P + T+ +LI G A    ++E+     ++ S+  L
Sbjct: 587 IEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 180/353 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++FNTLI  + ++   + V  +   M+E+   P+     T+I  +CK G L+   ++L
Sbjct: 298 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 357

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+      P V+   +L+  +   ER EE   LL  M  K+   D + ++++V    + 
Sbjct: 358 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 417

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++  + + E+ML+ G   +   YTT I  +C+ G I+EA  L++ M   G KP   ++
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++++G   A+R  ++     QM+ +    +   FN +I  LC+ G  +QA  +L   L 
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 537

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ I+YS +I G  K G+  E L+L   M  K +SP    Y+S+ S+L + G++ +
Sbjct: 538 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 597

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + F  ++  ++     +Y +++    ++G   +A+     MVS G  P+ S
Sbjct: 598 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 650



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 37/353 (10%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE-RIEEGMV 114
           P       ++ A C+GG  ++ V +L+ +H + C+ + + N +L+L  I ++  ++E + 
Sbjct: 192 PIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCA-LDVGNCNLVLNAICDQGSVDEALH 250

Query: 115 LLKRMLRKNMIHDTIAYSLIV----YAK------------VKM----------------- 141
           LL+ +       D ++Y+ ++     AK            V+M                 
Sbjct: 251 LLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC 310

Query: 142 RN--LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           RN   E    V  +M++ G + +  +Y T I   C+ G +E A+ ++  M + GLKP   
Sbjct: 311 RNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVV 370

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            +N L++G   A+R EE+     +M  +        FN ++   C+ G   +   +L   
Sbjct: 371 CYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 430

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L+ G  P+ ITY+ +I G+ KEG I E + L   M      P   +YT ++  LC   + 
Sbjct: 431 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 490

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +A+     M           + +L+    +KG   +A+ L ++M+  G  P 
Sbjct: 491 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 5/312 (1%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +++  C+ GQL++   +   +      P       ++  +    RI + + +L  M R+
Sbjct: 132 AMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 188

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y +I+ A  +     SA+ V E++  RG + +       + A C+ G ++EA
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 248

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++++ + G +P   ++N +++G   AKR        E+M+     P+   FN +I  
Sbjct: 249 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 308

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G  ++ + +L   ++ G +P+   Y+ +I G  KEG ++   ++   M    + P 
Sbjct: 309 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 368

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI-YESLVGIHLEKGNKAKALHLC 361
           +  Y +L+  LC   + EE ++    M      P  D+ +  LV    + G   + + L 
Sbjct: 369 VVCYNTLLKGLCSAERWEETEELLAEMFDKD-CPLDDVTFNILVDFFCQNGLVDRVIELL 427

Query: 362 EEMVSEGLKPST 373
           E+M+  G  P  
Sbjct: 428 EQMLEHGCMPDV 439



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 3/243 (1%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ +V    +   LESA  +   +       N++ Y   + A C  G+I +A  ++ EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P    +++++E   +      ++   E + +R         N ++  +C+ G+  
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L      G  P+ ++Y+ ++ G         V +L  EM   +  P +  + +LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S LC+ G  E   +    M  H   P + +Y +++    ++G+   A  +   M S GLK
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 371 PST 373
           P+ 
Sbjct: 367 PNV 369



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 104/213 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   + IS+  ++  +  ++R      +   M++     N  T  TLI+ LCK G ++  
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L ++    CSP +I  +++I  + +  + +E + LL  M+ K M  +TI YS I  A
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +   +   + +++ +      +++ +Y   I + C+ G+ E A   +  M ++G  P 
Sbjct: 589 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 648

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           + T+ +LI G A    ++E+     ++ S+  L
Sbjct: 649 ESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 176/369 (47%), Gaps = 3/369 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           + +   A DV + + + GF+ ++++FN+L+    K    D   ++   M+     PN  T
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  LCK  +     ++L+ +  +  +P     ++LI  + + ++IEE   +L+RM 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 D + YS I++A  K   L  A    +EM K+  S +   Y T I   C+ GKI 
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406

Query: 181 EANCLMQEMENAG-LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           EA  ++++M+ +G + P   T++ +I G  K+  + E+    ++M      P    +  +
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+CG  ++A  +L      G +PN +TY+ LI G  K  ++ E  ++  EM     
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKS--HSLVPGVDIYESLVGIHLEKGNKAKA 357
            P L  Y ++++ LC  G+++EA +  + MK       P    Y ++V   +      +A
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586

Query: 358 LHLCEEMVS 366
             L E+M S
Sbjct: 587 EQLLEQMKS 595



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 172/362 (47%), Gaps = 1/362 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   + +RG   +L+++N L+  + K         + + M+E    PN  T  +
Sbjct: 195 LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 254

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G +     +L  +  K   P V+  ++LI  + + ++  E   +L+ M  + 
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS +++   K   +E A  +   M   G + +  VY++ I A+C+ GK+ EA 
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFNEMIRR 242
             +QEM      P   T+N +I+G  K  +I E+    EQM  S  +LP    ++ +I  
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVING 434

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A  +L      G +P+ +TY+ +I G  K G ++E   L   M+    +P 
Sbjct: 435 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 494

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT+LIS LC+  K++EA++  + M++    P +  Y ++V      G   +A  L +
Sbjct: 495 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 554

Query: 363 EM 364
            M
Sbjct: 555 RM 556



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 181/388 (46%), Gaps = 33/388 (8%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GFS +  S+N+L+ V+ +  ++     +++  L     P+  +   +IS  C  G L   
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 78  VDML--------------------------------DRIHGKRCSPMVIVNTSLILRIIQ 105
           +++L                                D +    C P V+  T+LI    +
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFAR 191

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
            +++EE M LL+ M  +    + + Y+++V A  K+  + +A  V ++M++ GF+ N   
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + + +  +C+ G +++A  L+  M   G++P   T++ LI+G  K+++  E+    E+M 
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           +R + P    ++ +I  LC+    ++A  ML      G +P+ + YS +I  + K G++ 
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK-SHSLVPGVDIYESL 344
           E  K   EM  +  SP +  Y ++I  LC+ GK+ EA    + M+ S  ++P V  Y ++
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +    +     +A  L + M   G  P 
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPD 459



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 171/361 (47%), Gaps = 1/361 (0%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           +L   G   +++++  LI    ++ + +   ++ + M E    PN  T   L+ ALCK  
Sbjct: 169 HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLS 228

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            +    D++ ++     +P V+   SL+    +   +++   LL  M+ K M  + + YS
Sbjct: 229 MVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYS 288

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K +    A  V EEM  RG + ++F Y+  I   C+  KIEEA  +++ M  +
Sbjct: 289 ALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 348

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P    ++ +I    K+ ++ E+    ++M  ++  P    +N +I  LC+ G   +A
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 408

Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             +L    + G   P+ +TYS +I G  K   + E  KL   M     +P +  YT++I 
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+CG+LEEA+   + MK     P V  Y +L+    +     +A  + EEM + G  P
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528

Query: 372 S 372
           +
Sbjct: 529 N 529


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 174/373 (46%), Gaps = 6/373 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V  +L     +  + SFNTL+  V K  R   V  +Y+ M      P+  T+  LI+
Sbjct: 76  AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C   ++   + +L  +  +  SP  +  TSL+  +    RI E   LL++M+R     
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRP 195

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEML--KRGFS----ANSFVYTTFIGAYCEYGKIE 180
           + + Y  ++       N   A+ ++EEML    GF      N   Y T I + C+ G I+
Sbjct: 196 NVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLID 255

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +   L  EM+  G+ P    ++ +I G     R E +     +M+   + P+   FN +I
Sbjct: 256 KGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLI 315

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G  ++AN +L L + +G SP+  TY+ LI G+  EG I +   L+  ME K I 
Sbjct: 316 DALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIE 375

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
               +Y  LI+  C+ G++ EA K ++ M    ++P V  Y +L+     +G    A +L
Sbjct: 376 TDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNL 435

Query: 361 CEEMVSEGLKPST 373
             EM    L P +
Sbjct: 436 FGEMKVHDLTPES 448



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 172/367 (46%), Gaps = 14/367 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG S + ++F +L+  +    R      + + M+     PN  T  TL++ LC  G   
Sbjct: 155 RRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTM 214

Query: 76  TYVDMLDRI------HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             V + + +       G    P ++   ++I  + ++  I++G  L   M  + +  D +
Sbjct: 215 LAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVV 274

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AYS I++        E A  ++ EM+  G   N   +   I A C+ GK+EEAN L++ M
Sbjct: 275 AYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM 334

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G  P   T+N LI+G     RI+++      M S+ +     ++N +I   C+ G  
Sbjct: 335 IQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +    + K   P  ITY+ L+ G  +EG++++   L+ EM+   ++P    Y  L
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNIL 454

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS--- 366
           +  LC+   L EA + F  +++H   P + I+  L+    +   KA+ + +  E+ +   
Sbjct: 455 LDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLI----DGLCKARKIEIARELFNRLS 510

Query: 367 -EGLKPS 372
            EGL+P+
Sbjct: 511 HEGLEPN 517



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 178/372 (47%), Gaps = 6/372 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN------IRYPNEAT 60
           A  + R + + G+  +++++ TL++ +  +    L  ++++ ML           PN   
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVC 240

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             T+I +LCK G +    ++   + G+  SP V+  +S+I  +    R E    L   M+
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + +++++ A  K   +E A  + + M++RG S ++F Y T I  +C  G+I+
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L   ME+ G++    ++N+LI G  K+ R+ E+     +MM ++++P+   +N ++
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L   G  + A  +         +P   TY+ L+ G  K   + E ++L++ +E     
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P++  +  LI  LC+  K+E A + F  +    L P V  Y  ++    + G    A  L
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540

Query: 361 CEEMVSEGLKPS 372
              M  +G  P+
Sbjct: 541 FLGMEEKGCAPN 552



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 161/361 (44%), Gaps = 6/361 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +   I+ N LI+     ++ D    +   ML     PN  T  +L+  LC G ++   
Sbjct: 122 GLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEA 181

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN------MIHDTIAY 131
             +L ++      P V+   +L+  +         + L + ML  N      +  + + Y
Sbjct: 182 TGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCY 241

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
             I+ +  K   ++    ++ EM  RG S +   Y++ I   C  G+ E A  L  EM +
Sbjct: 242 CTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVD 301

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   TFN+LI+   KA ++EE+    + M+ R   P    +N +I   C  G    
Sbjct: 302 EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDD 361

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +      KG   + ++Y+ LI GY K G + E  KLY EM  K I PT+  Y +L++
Sbjct: 362 ARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLT 421

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            L + GK+ +A   F  MK H L P    Y  L+    +  + ++A+ L   + +   +P
Sbjct: 422 GLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481

Query: 372 S 372
           S
Sbjct: 482 S 482



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 164/356 (46%), Gaps = 2/356 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ RG S  +++++++IH +  + R +    ++  M++   +PN  T   LI ALCK G+
Sbjct: 264 MKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGK 323

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    +L  +  +  SP      +LI     E RI++   L   M  K +  D ++Y++
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +  A  +Y EM+ +        Y T +      GK+ +A  L  EM+   
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N+L++G  K   + E++     + +    PS   FN +I  LC+    + A 
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +G  PN ITY+ +I G  K G+++    L+  ME K  +P L  + +L+   
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA-LHLCEEMVSEG 368
           CQ  ++++  +  + M      P       +V + L K  K +  LHL     ++G
Sbjct: 564 CQNDEMQKVVELLQEMAEKDFSPDASTISIVVDL-LSKDEKYREYLHLLPTFPAQG 618



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 145/323 (44%), Gaps = 8/323 (2%)

Query: 56  PNEATIRTLISALCKGGQLQT--YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           P+   +   + + CK G ++      + + +   + +P +    +L+  + + +R  + +
Sbjct: 53  PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
            L KRM    +  D I  ++++     +  ++  L V  EML+RG S N+  +T+ +   
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK----- 228
           C   +I EA  L+++M   G +P   T+  L+ G         ++   E+M++       
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232

Query: 229 -LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            + P+   +  +I  LC+ G   +   +      +G SP+ + YS +I G    G  +  
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
             L+ EM  + + P +  +  LI +LC+ GK+EEA+   K+M      P    Y +L+  
Sbjct: 293 KGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG 352

Query: 348 HLEKGNKAKALHLCEEMVSEGLK 370
              +G    A  L   M S+G++
Sbjct: 353 FCLEGRIDDARDLFVSMESKGIE 375



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 100/237 (42%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +E +G     +S+N LI+   KS R     ++Y+ M+     P   T  TL++
Sbjct: 362 ARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLT 421

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L + G+++   ++   +     +P       L+  + +   + E M L   +   +   
Sbjct: 422 GLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               ++ ++    K R +E A  ++  +   G   N   YT  I   C+ G++E A  L 
Sbjct: 482 SIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLF 541

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             ME  G  P   TFN L+ G  +   +++ +   ++M  +   P  S  + ++  L
Sbjct: 542 LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLL 598



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 96/248 (38%), Gaps = 43/248 (17%)

Query: 168 TFIGAYCEYGKIE--EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
            F+ + C+ G I+  EA  +   + +    P   +FN L+   AK KR  + +S  ++M 
Sbjct: 60  NFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMS 119

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              L P     N +I   C          +L   L +G SPN +T++ L+ G      I 
Sbjct: 120 LIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRIS 179

Query: 286 E---VLKLYYEMEYK--------------------------------------SISPTLP 304
           E   +L+    M Y+                                      +I P L 
Sbjct: 180 EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y ++I SLC+ G +++  + F  MK   + P V  Y S++      G    A  L  EM
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299

Query: 365 VSEGLKPS 372
           V EG+ P+
Sbjct: 300 VDEGVHPN 307



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E+A ++   L   G   ++I++  +IH + KS + +    ++  M E    PN  T 
Sbjct: 497 RKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTF 556

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
            TL+   C+  ++Q  V++L  +  K  SP     + ++  + ++E+  E + LL
Sbjct: 557 NTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 187/370 (50%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ +   L +RG   S++SFN+++  + K  + D    +++ M ++   PN +T   
Sbjct: 69  FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNI 127

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC GG+++    +LD +      P ++    ++ R+ +  ++EE   + +   ++ 
Sbjct: 128 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y  ++    K   ++ A  ++E+ML  G +AN  VYT+ I  +  +G+ E+ +
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 247

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +E+   G KP     N  ++   KA  +E+     E + S   LP   +++ +I  L
Sbjct: 248 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A++ + +      +GF+ +   Y+ ++ G+ K G++ +  ++  EM+ K + PT+
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +++  L +  +L+EA   F+  KS  +   V +Y SL+    + G   +A  + EE
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427

Query: 364 MVSEGLKPST 373
           M+ +GL P+ 
Sbjct: 428 MMKKGLTPNV 437



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 175/373 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A+ +     QRG +   +++ +LI  + K  + D  +R+++ ML+     N    
Sbjct: 171 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 230

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI      G+ +    +   +  + C P + +  + +  + +   +E+G ++ + +  
Sbjct: 231 TSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 290

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              + D  +YS++++   K         ++  M ++GF+ ++  Y   +  +C+ GK+ +
Sbjct: 291 YGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHK 350

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +++EM+   ++P   T+  +++G AK  R++E+    E+  S+ +  +   ++ +I 
Sbjct: 351 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 410

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              + G   +A  +L   + KG +PN  T++ L+    K  EI E L  +  M+     P
Sbjct: 411 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 470

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y+ LI+ LC+  K  +A  +++ M+   LVP V  Y +++    + GN   A  L 
Sbjct: 471 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 530

Query: 362 EEMVSEGLKPSTS 374
           E   + G  P  +
Sbjct: 531 ERFKANGGIPDAA 543



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 156/329 (47%), Gaps = 1/329 (0%)

Query: 41  LVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI 100
           + W+ +  +      P++ +  ++I  LCK G+L    ++  ++  +R  P      ++I
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 101 LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
           +      R E+   LL+R+  +  I   ++++ I+    K R ++ AL ++ E++K+   
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 119

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            NS  Y   I   C  G++EEA  ++ EME+A L P   T N++++   KA+++EE+   
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            E    R   P C  +  +I  L + G   +A  +    LD G + N + Y+ LI  +  
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G  ++  K++ E+  +   P L    + +  + + G++E+    F+ ++S+  +P V  
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           Y  L+    + G   +  ++   M  +G 
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGF 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 139/318 (43%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E    + + L +RG    L   NT +  V K+   +    I++ +      P+  +   L
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K GQ +   ++   +  +  +       +++    +  ++ +   +L+ M  K +
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
                 Y  IV    K+  L+ A +++EE   +G   N  +Y++ I  + + G+I+EA  
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++EM   GL P   T+N L++   KA+ I E+L   + M   K  P+   ++ +I  LC
Sbjct: 424 ILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLC 483

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                 +A         +G  PN +TY+ +I G AK G I +   L+   +     P   
Sbjct: 484 RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA 543

Query: 305 AYTSLISSLCQCGKLEEA 322
           ++ +LI  +    +  EA
Sbjct: 544 SFNALIEGMSNANRAMEA 561



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/369 (19%), Positives = 157/369 (42%), Gaps = 1/369 (0%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A+     L+ +G     +S+ ++I V+ K+ R      ++  M      P      T+I
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
                 G+ +    +L+R+  + C P V+   S++  + ++ +++E + L + M +K+  
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAE 119

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            ++  Y++I+        +E A  + +EM       N       +   C+  K+EEA  +
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            +     G  P   T+  LI+G  K  +++E+    E+M+      +   +  +IR    
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  +  + +    + +G  P+    +  +    K GE+++   ++ ++      P + +
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y+ LI  L + G+  E    F  MK          Y ++V    + G   KA  + EEM 
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359

Query: 366 SEGLKPSTS 374
            + ++P+ +
Sbjct: 360 EKCVQPTVA 368



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 5/258 (1%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y+ +++   K   L  A  ++ +M        ++ Y T I  Y   G+ E+A  L+
Sbjct: 17  DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL 76

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + +   G  P   +FN ++    K ++++E+LS  E +M +   P+ S +N +I  LC  
Sbjct: 77  ERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNIIIDMLCLG 135

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +L         PN +T + ++    K  +++E  K++     +  +P    Y
Sbjct: 136 GRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY 195

Query: 307 TSLISSLCQCGKLEEADKYFKIM--KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            SLI  L + G+++EA + F+ M    H+  P V  Y SL+      G K     + +E+
Sbjct: 196 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV--YTSLIRNFFIHGRKEDGHKIFKEL 253

Query: 365 VSEGLKPSTSYLCSASTC 382
           +  G KP  + L +   C
Sbjct: 254 IRRGCKPDLTLLNTYMDC 271



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
              E++  GLKP D ++  +I    KA R+ E+     QM + + +P   A+N MI    
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A  +L    ++G  P+ ++++ ++    K+ ++ E L L+ E+  K   P   
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSS 123

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH----L 360
            Y  +I  LC  G++EEA +    M+  SL P +      V I +++  KA+ L     +
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL----LTVNIMVDRLCKARKLEEAYKI 179

Query: 361 CEEMVSEGLKPSTSYLCS 378
            E     G  P     CS
Sbjct: 180 FESASQRGCNPDCVTYCS 197



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%)

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           K ++E++ + + P   +YTS+I  LC+ G+L EA++ F  M++   VP    Y +++  +
Sbjct: 4   KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
              G    A  L E +   G  PS     S  TC G
Sbjct: 64  GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLG 99


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 169/370 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF++   +  +G   SL ++N +I+ + K  R      I   ML     P+  T  
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 227

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL+   C+        ++   +  +   P ++  +SLI    +   +++ +V  + M + 
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D + Y+++++   +  N+  AL + +EML++G   +   Y T +   C+   + +A
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 347

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  EM   G  P   TF  LI G  +   + ++LS    M  R + P   A+N +I  
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 407

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G  ++A+ +    + +   PN ITY  LI  Y   G + E  +L+  M  K I PT
Sbjct: 408 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           L    ++I   C+ G   +AD++   M +  + P    Y +L+   + + N  KA     
Sbjct: 468 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWIN 527

Query: 363 EMVSEGLKPS 372
           +M  EGL P 
Sbjct: 528 KMEKEGLLPD 537



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 184/368 (50%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+A++V R + + G  L++ + N +++ + K  + D V      M  N  Y +  T  TL
Sbjct: 100 ELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTL 159

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A C+ G L+   ++++ +  K   P +    ++I  + ++ R      +L  ML   +
Sbjct: 160 IGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL 219

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DT  Y+ ++    +  N   A  ++ EML++G   +   +++ I  +     +++A  
Sbjct: 220 SPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALV 279

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             ++M+  GL P +  + +L+ G  +   + E+L   ++M+ +  +    A+N ++  LC
Sbjct: 280 YFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLC 339

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +      A+ +    +++G  P+  T++ LI G+ ++G + + L L+  M  ++I P + 
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIV 399

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY +LI   C+ G++E+A + +  M S  + P    Y  L+  +   G+ ++A  L + M
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 459

Query: 365 VSEGLKPS 372
           + +G+KP+
Sbjct: 460 IEKGIKPT 467



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 171/360 (47%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G    L+SF++LI V +++   D     ++ M +    P+      L+   C+ G + 
Sbjct: 251 RQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNML 310

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + + D +  + C   VI   +++  + +E+ + +   L   M+ +  + D   ++ ++
Sbjct: 311 EALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 370

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +   +  N+  AL ++  M +R    +   Y T I  +C+ G++E+A+ L   M +  + 
Sbjct: 371 HGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF 430

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ +LI        + E+    + M+ + + P+    N +I+  C  G++ +A+  
Sbjct: 431 PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 490

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   + KG +P+ I+Y+ LI G+ +E  + +      +ME + + P +  Y  +++  C+
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            G+++EA+   + M    + P    Y +L+  H+ + N  +A    +EM+  G  P   +
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDVF 610



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 166/359 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G    ++++NTLI    +    +  + I   M +    P+  T   +I+ LCK G+
Sbjct: 144 MEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGR 203

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                 +L  +     SP      +L++   + +   E   +   MLR+ ++ D +++S 
Sbjct: 204 YARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSS 263

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    + R+L+ ALV + +M K G   ++ +YT  +  YC  G + EA  +  EM   G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
                  +N ++ G  K K + ++    ++M+ R  LP    F  +I   C+ GN  +A 
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +   P+ + Y+ LI G+ K GE+++  +L+  M  + I P    Y  LI++ 
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G + EA + + +M    + P +    +++  +   G+ +KA      M+++G+ P 
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 502



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 152/340 (44%), Gaps = 17/340 (5%)

Query: 29  LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR 88
           ++HV  +S R      +   M+          +  L+S++C                   
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCG-----------------N 43

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           C    +V   LI   +Q  ++ EG    + +  K  +    A + ++   VK+  +E A 
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            V+ E+++ G   N +     + A C+ GK ++    + EME  G+     T+N LI   
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +   +EE+      M  + L PS   +N +I  LC+ G   +A G+L   L+ G SP+ 
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
            TY+ L+    +     E  +++ EM  + + P L +++SLI+   +   L++A  YF+ 
Sbjct: 224 TTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           MK   LVP   IY  L+  +   GN  +AL + +EM+ +G
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 17/241 (7%)

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V+  V+ R L  A  +   M++R   +   V    + + C        NC    +    
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMC-------GNCGTNNL---- 49

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
                  F+LLI    +A+++ E       + S+  L S +A N ++  L +    + A 
Sbjct: 50  ------VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    +  G   N  T + ++    K+G+  +V     EME   I   +  Y +LI + 
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G LEEA +    M    L P +  Y +++    +KG  A+A  +  EM++ GL P T
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDT 223

Query: 374 S 374
           +
Sbjct: 224 T 224


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 175/361 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F   R + + G   S+IS N L++ + K +R D  W++Y+ M     +PN  T   L  
Sbjct: 198 GFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTH 257

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G +    D L+R+  +   P ++   +LI    ++ R+++   L + M R+N++ 
Sbjct: 258 VFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLP 317

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y+ ++    K   +  A  ++  M+ RG + +   + T I  YC+ GK+ E+  L+
Sbjct: 318 DLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLL 377

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM  +G+ P   T  +LIEG  K  RI  +L+   ++    +  S   ++ ++  +CE 
Sbjct: 378 HEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEE 437

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +L     +G+ P    Y+ LI    K   I + L +  EM +++I P+   Y
Sbjct: 438 GRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITY 497

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LI  LC+  +  EA+   + M    ++P  DI  +L+ ++ ++ +  KA  L +    
Sbjct: 498 KALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAK 557

Query: 367 E 367
           E
Sbjct: 558 E 558



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 143/310 (46%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+ A  + G ++       +I    C P VI    L+  +++  RI++   + K M R  
Sbjct: 185 LVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVG 244

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  ++  ++++ +   +  +++      E M + GF  +   Y T I  YC  G++++A 
Sbjct: 245 IHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAF 304

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L + M    + P   ++  L+ G  K  ++ E+     +M+ R L P   +FN +I   
Sbjct: 305 YLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGY 364

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  +++  +L   +  G  P+++T   LI GY KE  I   L L  E+E   +  + 
Sbjct: 365 CKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPIST 424

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  L+ S+C+ G+   A    + +     VPGV+IY  L+    +  + A AL +  E
Sbjct: 425 DIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSE 484

Query: 364 MVSEGLKPST 373
           M    +KPS 
Sbjct: 485 MGHRNIKPSA 494



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/288 (19%), Positives = 128/288 (44%), Gaps = 35/288 (12%)

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           + C+   ++   L+   ++E  I+EG    ++++    +   I+ + ++   +K+  ++ 
Sbjct: 173 QDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQ 232

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
              VY+EM + G   NS+ +      +C+ G +++ N  ++ ME  G +P   T+N LI 
Sbjct: 233 CWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLIS 292

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              +  R++++      M  R +LP                                   
Sbjct: 293 CYCRKGRLDDAFYLYRIMYRRNVLP----------------------------------- 317

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + ++Y+ L+ G  KEG+++E  +L++ M ++ ++P + ++ +LI   C+ GK+ E+    
Sbjct: 318 DLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLL 377

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             M    + P     + L+  + ++     AL+L  E+   G+  ST 
Sbjct: 378 HEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTD 425



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 119/271 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG +  ++SFNTLI    K  +      +   M+ +   P++ T + LI    K  ++ 
Sbjct: 347 HRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIV 406

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           + ++++  +          +   L++ I +E R      LL+R+ ++  +     Y+ ++
Sbjct: 407 SALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLI 466

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +  K  ++  AL+V  EM  R    ++  Y   I   C   +  EA  LM+EM  +G+ 
Sbjct: 467 ESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGML 526

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  +    L+    K + I ++ +  +       +    ++N +++  CE  +A +   +
Sbjct: 527 PDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMEL 586

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
               L  GF+PN  T+  +I G  K   +++
Sbjct: 587 QDRMLKVGFAPNIQTFRQMIHGLWKAMAVEK 617



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 84/211 (39%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   LE+ G  +S   ++ L+  + +  R      + Q + +    P       LI 
Sbjct: 408 ALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIE 467

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LCK   +   + +   +  +   P  I   +LI  + +  R  E   L++ ML+  M+ 
Sbjct: 468 SLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLP 527

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D      +++   K R++  A  + +   K     +S  Y T +  YCE         L 
Sbjct: 528 DPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQ 587

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
             M   G  P  +TF  +I G  KA  +E+ 
Sbjct: 588 DRMLKVGFAPNIQTFRQMIHGLWKAMAVEKD 618


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 1/366 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+  ++ ++GF   + ++N+LI  + K    +    I Q M+     PN  T  TLIS
Sbjct: 282 ALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLIS 341

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK  +++   D+   +  K   P V    +LI  +   +  +  M + + M  K    
Sbjct: 342 ALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKP 401

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   YS+++ +    R L+ AL++ +EM   G + N+ VY T I   C+  +IE+A  + 
Sbjct: 402 DEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIF 461

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +ME  G+     T+N LI+G  K KR+EE+    +QM+   L P    +N ++   C  
Sbjct: 462 DQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRV 521

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ ++A  ++      G  P+  TY  LIGG  + G +    KL   ++ K I  T  AY
Sbjct: 522 GDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAY 581

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMV 365
             +I +L    + +E  + F+ M   S  P    ++ +  G+    G   +A+    EM+
Sbjct: 582 NPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEML 641

Query: 366 SEGLKP 371
            +G+ P
Sbjct: 642 EKGILP 647



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 165/355 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  L + +FN LI  + K+ +      + + M  +   P+E T  TL+    + G L   
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + M  ++ G  C    +    L+    +E R+EE +  +  +  +    D + ++ +V  
Sbjct: 213 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 272

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++ N+  AL + + M+++GF  + + Y + I   C+ G+ E+A  ++Q+M      P 
Sbjct: 273 FCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPN 332

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI    K   IE +      ++S+ LLP    FN +I+ LC   N   A  M  
Sbjct: 333 TVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE 392

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG  P+E TYS LI     E  ++E L L  EME    +     Y +LI  LC+  
Sbjct: 393 EMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR 452

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++E+A++ F  M+   +      Y +L+    +     +A  L ++M+ EGLKP 
Sbjct: 453 RIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPD 507



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 173/346 (50%), Gaps = 4/346 (1%)

Query: 28  TLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
           TL+  +T+S   D +  + + +  +   PN  T  TLI +     +++  + +L+   G 
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGF 119

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           +  P        +  ++++ +++   +L  +M+ + ++ D   +++++ A  K   L  A
Sbjct: 120 K--PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           +++ EEM   G   +   +TT +  + E G +  A  + ++M   G    + +  +L+ G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K  R+EE+L +  ++      P    FN ++   C  GN   A  ++   ++KGF P+
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
             TY+ LI G  K GE ++ +++  +M  +  SP    Y +LIS+LC+  ++E A    +
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 328 IMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPS 372
           I+ S  L+P V  + +L+ G+ L K N+  A+ + EEM ++G KP 
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSK-NQDIAMEMFEEMKNKGCKPD 402



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 1/334 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A ++ + +  R  S + +++NTLI  + K +  +    + + ++     P+  T  T
Sbjct: 314 FEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNT 373

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC        ++M + +  K C P     + LI  +  E R++E ++LLK M    
Sbjct: 374 LIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSG 433

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y+ ++    K R +E A  ++++M   G S +S  Y T I   C+  ++EEA+
Sbjct: 434 CARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEAS 493

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            LM +M   GLKP   T+N L+    +   IE++    + M S    P    +  +I  L
Sbjct: 494 QLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGL 553

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G    A+ +L     KG       Y+ +I         +E ++L+ EM  KS  P  
Sbjct: 554 CRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDA 613

Query: 304 PAYTSLISSLCQ-CGKLEEADKYFKIMKSHSLVP 336
             +  +   LC   G ++EA  +   M    ++P
Sbjct: 614 LTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILP 647



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 158/329 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  L+ +S   L++   K  R +   R    + E    P++ T  +L++  C+ G +   
Sbjct: 223 GCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDA 282

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D++D +  K   P V    SLI  + +    E+ + +L++M+ +    +T+ Y+ ++ A
Sbjct: 283 LDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISA 342

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E+A  +   ++ +G   +   + T I   C     + A  + +EM+N G KP 
Sbjct: 343 LCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPD 402

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           + T+++LI+     +R++E+L   ++M S     +   +N +I  LC+    + A  +  
Sbjct: 403 EFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD 462

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G S + +TY+ LI G  K   ++E  +L  +M  + + P    Y SL++  C+ G
Sbjct: 463 QMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            +E+A    + M S+   P +  Y +L+G
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTLIG 551



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 1/311 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A D+ R L  +G    + +FNTLI  +  S   D+   +++ M      P+E T   L
Sbjct: 350 EAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 409

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +LC   +L+  + +L  +    C+   +V  +LI  + +  RIE+   +  +M    +
Sbjct: 410 IDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV 469

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              ++ Y+ ++    K + +E A  + ++M+  G   + F Y + +  +C  G IE+A  
Sbjct: 470 SRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGD 529

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++Q M + G +P   T+  LI G  +A R++ +      +  + ++ +  A+N +I+ L 
Sbjct: 530 IVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALF 589

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG-EIQEVLKLYYEMEYKSISPTL 303
                K+   +    ++K   P+ +T+  +  G    G  IQE +    EM  K I P  
Sbjct: 590 MRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEF 649

Query: 304 PAYTSLISSLC 314
           P++  L   LC
Sbjct: 650 PSFGFLAEGLC 660



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 2/278 (0%)

Query: 96  NTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
           N +L+L++ Q    +    LLK++     I +   ++ ++ +      +E+ L + E  L
Sbjct: 58  NETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENEL 117

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
             GF  ++  Y   + A  E  K++    L  +M N G+     TFN+LI+   KA ++ 
Sbjct: 118 --GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR 175

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            ++   E+M +  L P    F  +++   E G+   A  M    L  G     ++   L+
Sbjct: 176 PAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLV 235

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G+ KEG ++E L+   E+  +  SP    + SL++  C+ G + +A      M      
Sbjct: 236 NGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           P V  Y SL+    + G   KA+ + ++M+     P+T
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT 333



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 96/207 (46%), Gaps = 1/207 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A ++   +E  G S S +++NTLI  + K+ R +   ++   M+     P++ T 
Sbjct: 452 RRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTY 511

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L++  C+ G ++   D++  +    C P +    +LI  + +  R++    LL+ +  
Sbjct: 512 NSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQM 571

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE-YGKIE 180
           K ++    AY+ ++ A    +  +  + ++ EM+++    ++  +       C   G I+
Sbjct: 572 KGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQ 631

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEG 207
           EA     EM   G+ P   +F  L EG
Sbjct: 632 EAIDFTVEMLEKGILPEFPSFGFLAEG 658


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 172/368 (46%), Gaps = 8/368 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A +    +E  G    ++++N L +           W++ Q ML N   P+  T   L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G ++    + +++  +     ++  T L+  + +  RI+E ++LL  M    +
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + YS           +E A+ +YEEM  +    NSFV +  I    E G I EA  
Sbjct: 442 KPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 493

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               +  + +      +N++I+G AK   I E++   +Q++ + + P+   FN +I   C
Sbjct: 494 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 553

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   +A  +L      G  P  +TY+ L+ GY +EG++  +  + +EME K+I PT  
Sbjct: 554 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 613

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT ++  LC+ G+L E+ +  K M +  L P    Y +++    +  +  KA  L  +M
Sbjct: 614 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 673

Query: 365 VSEGLKPS 372
           +   L+PS
Sbjct: 674 LQHSLQPS 681



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 179/369 (48%), Gaps = 10/369 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRT 63
           E +F +   +  +G  LS++++  L+  + KS R D    I  H +E I   P+  T   
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA-VILLHEMEVIGLKPDLLTYSR 450

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
                   G ++  +++ + +  KR  P   V +++I  + ++  I E  +    + + +
Sbjct: 451 --------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 502

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I Y++++    K+ N+  A+  Y++++++G S     + + I  +C+ GK+ EA 
Sbjct: 503 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 562

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  ++  GL P   T+  L+ G  +   +        +M ++ + P+   +  +++ L
Sbjct: 563 KLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 622

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   ++  +L     +G  P++ITY+ +I  + K  ++Q+  +L+ +M   S+ P+ 
Sbjct: 623 CKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSP 682

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI+ LC  G L++AD+    ++  S+      Y +++  H  KG+   AL    +
Sbjct: 683 VTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQ 742

Query: 364 MVSEGLKPS 372
           MV  G + S
Sbjct: 743 MVERGFEVS 751



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 143/308 (46%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I    K G +   V    +I  K  SP ++   SLI    ++ ++ E + LL  +    
Sbjct: 513 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 572

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++  ++ Y+ ++    +  ++ S   +  EM  +        YT  +   C+ G++ E+ 
Sbjct: 573 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESV 632

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ M   GL P   T+N +I+   KA  ++++     QM+   L PS   +N +I  L
Sbjct: 633 QLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 692

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  GN K A+ +L    D+     ++ Y+ +I  +  +G++Q  L  +++M  +    ++
Sbjct: 693 CVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSI 752

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+++I+ LC+   + +A  +F +M +H + P  DI   ++      G+      +   
Sbjct: 753 RDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAM 812

Query: 364 MVSEGLKP 371
           M+  GL P
Sbjct: 813 MIKCGLLP 820



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 133/280 (47%), Gaps = 2/280 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G S ++++FN+LI+   K  +     ++   +  +   P   T  TL++  C+ G + 
Sbjct: 535 EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 594

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           +  DML  +  K   P  I  T ++  + +E R+ E + LLK M  + +  D I Y+ ++
Sbjct: 595 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 654

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +  K  +L+ A  ++ +ML+     +   Y   I   C YG +++A+ L+  +++  ++
Sbjct: 655 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 714

Query: 196 PYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                +  +I+  CAK   ++ +L +  QM+ R    S   ++ +I RLC+      A  
Sbjct: 715 LTKVAYTTIIKAHCAKGD-VQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKF 773

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
              + L  G  P++     ++  + + G+   V +++  M
Sbjct: 774 FFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMM 813



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 166/388 (42%), Gaps = 46/388 (11%)

Query: 21  LSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           +S+ ++N+L++ +  +D   ++W +Y  +  +    NE T   LI  LC+  +LQ  V  
Sbjct: 201 VSIATYNSLLYNLRHTD---IMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTF 257

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L    G+   P V+   +L+    +   ++        M++  ++ D  +Y+++++    
Sbjct: 258 LRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCV 317

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             ++E AL    +M   G   +   Y      +   G I  A  ++Q M   GL P   T
Sbjct: 318 AGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVT 377

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           + +LI G  +   IEES    E+M+S+ L  S   +  ++  LC+ G   +A  +L    
Sbjct: 378 YTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G  P+ +TYS         G ++E ++LY EM  K I P     +++IS L + G + 
Sbjct: 438 VIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS 489

Query: 321 EADKYFK-IMKSH----------------------------------SLVPGVDIYESLV 345
           EA  YF  + KS                                    + P +  + SL+
Sbjct: 490 EAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 549

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
               +KG  A+A+ L + +   GL P++
Sbjct: 550 YGFCKKGKLAEAVKLLDTIKVHGLVPTS 577



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 155/366 (42%), Gaps = 24/366 (6%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FD+ R   + GF  S +S+  + HVV +  ++  + R+   M+E     +  ++  L+  
Sbjct: 102 FDLLR--NEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCN 159

Query: 68  LCKGGQLQTYV-DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             +   L   V DML   + +                   E + + + +L +M   N+  
Sbjct: 160 SFRDWDLNNVVWDMLACAYSR------------------AEMVHDALFVLAKMKVLNLQV 201

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ ++Y    +R+ +    VY E+   G   N +     I   C   ++++A   +
Sbjct: 202 SIATYNSLLY---NLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFL 258

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E       P   +FN L+ G  K   ++ + S+   M+   LLP   ++N ++  LC  
Sbjct: 259 RETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVA 318

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ ++A        + G  P+ +TY+ L  G+   G I    K+   M    ++P L  Y
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI   CQ G +EE+ K  + M S  L   +  Y  L+    + G   +A+ L  EM  
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEV 438

Query: 367 EGLKPS 372
            GLKP 
Sbjct: 439 IGLKPD 444



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/224 (19%), Positives = 97/224 (43%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FD+   +E +    + I++  ++  + K  R     ++ ++M     +P++ T  T+I +
Sbjct: 597 FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQS 656

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK   LQ    + +++      P  +    LI  +     +++   LL  +  +++   
Sbjct: 657 FCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLT 716

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            +AY+ I+ A     ++++ALV + +M++RGF  +   Y+  I   C+   I +A     
Sbjct: 717 KVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFC 776

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
            M   G+ P  +   +++    ++            M+   LLP
Sbjct: 777 MMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 181/360 (50%), Gaps = 6/360 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR---TLISALCKGGQL 74
           G   ++++FNTLI  +    RN L  R++Q + + + +     IR   T++  +CK G L
Sbjct: 255 GCPPNVVTFNTLIGYLC---RNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHL 311

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +   ++LDR+      P V+   +++  +   ER E+   LL  M   +   D + ++++
Sbjct: 312 EVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNIL 371

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           V    +   +   + + E+ML+ G   +   YTT I  +C+ G I+EA  L++ M   G 
Sbjct: 372 VDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGC 431

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   ++ ++++G   A+R  ++     QM+ +   P+   FN +I  LC+ G  +QA  
Sbjct: 432 RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIE 491

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L   L  G SP+ I+YS +I G  K G+  E L+L   M  K +SP    Y+S+ S+L 
Sbjct: 492 LLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 551

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           + G++    + F  ++  ++     +Y +++    ++G   +A+     MVS G  P+ S
Sbjct: 552 KEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNES 611



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 161/372 (43%), Gaps = 2/372 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLENIRY-PNEATI 61
           F  A  V + L  RG +L + + N +++ V     + D   R+ + +  +    P+  + 
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             ++  LC   +     D+++ +    C P V+   +LI  + +    E    +L +M+ 
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                D   Y+ ++    K  +LE A  + + M   G   N   Y T +   C   + E+
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+ EM +      D TFN+L++   +   +   +   EQM+    +P    +  +I 
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G   +A  +L      G  PN I+Y+ ++ G        +   L  +M  +  SP
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               + ++I+ LC+ G +E+A +  K M  +   P +  Y +++    + G   +AL L 
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528

Query: 362 EEMVSEGLKPST 373
             MV++G+ P+T
Sbjct: 529 NVMVNKGMSPNT 540



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 104/213 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   + IS+  ++  +  ++R      +   M+E    PN  T  T+I+ LCK G ++  
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQA 489

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L ++    CSP +I  +++I  + +  + +E + LL  M+ K M  +TI YS I  A
Sbjct: 490 IELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +   + +++ +      +++ +Y   I + C+ G  + A   +  M ++G  P 
Sbjct: 550 LSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPN 609

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           + T+ +LI G A    ++E+     ++ S+  L
Sbjct: 610 ESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 42/284 (14%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC---------------- 174
           Y  +V A      +  AL V +EM +RG +    +Y   + A C                
Sbjct: 118 YFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQ 177

Query: 175 -----------------------EYGKIEEANCLMQEMENA-GLKPYDETFNLLIEGCAK 210
                                  + G ++EA  L++++  + G  P   ++N +++G   
Sbjct: 178 DLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCM 237

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           AKR        E+M+     P+   FN +I  LC  G  ++ + +L   +D G +P+   
Sbjct: 238 AKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRM 297

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ ++ G  KEG ++   ++   M    + P +  Y +++  LC   + E+A++    M 
Sbjct: 298 YATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMF 357

Query: 331 SHSLVPGVDI-YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +   P  D+ +  LV    + G   + + L E+M+  G  P  
Sbjct: 358 DND-CPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDV 400



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 5/217 (2%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE-GCAK--AKRIEESL 218
           N++ Y   + A C  G+I +A  ++ EM   G  P    +++++E  C++        ++
Sbjct: 114 NAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAV 173

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCE-CGNAKQANGML-TLALDKGFSPNEITYSHLIG 276
              + +  R         N ++  +C+  G+  +A  +L  L    G  P+ ++Y+ ++ 
Sbjct: 174 RVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLK 233

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G         V  L  EM      P +  + +LI  LC+ G  E   +    M  H   P
Sbjct: 234 GLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTP 293

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + +Y +++    ++G+   A  + + M S GLKP+ 
Sbjct: 294 DIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNV 330



 Score = 41.2 bits (95), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 35/191 (18%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A ++ + +   G S  LIS++T+I  + K+ + D    +   M+     PN     
Sbjct: 485 LVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 544

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           ++ SAL K G++   + M D                     IQ+  I             
Sbjct: 545 SIASALSKEGRINRVIQMFDN--------------------IQDVTIRS----------- 573

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D + Y+ ++ +  K    + A+     M+  G   N   YT  I      G ++EA
Sbjct: 574 ----DAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEA 629

Query: 183 NCLMQEMENAG 193
             ++ E+ + G
Sbjct: 630 QEMLTELCSKG 640


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 166/355 (46%), Gaps = 2/355 (0%)

Query: 1   MRLFEVAFDVCRYLE--QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNE 58
           +R  E+      YLE    G+  +   FN L+H   K         ++  + +    P  
Sbjct: 118 LRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTV 177

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            +  TLIS  CK G ++    +   +  +R  P V   ++LI  + +E R++EG +L   
Sbjct: 178 VSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE 237

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M  K ++ + + +++++  + K   ++ AL  ++ ML +G   +   Y   I   C+ G 
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGD 297

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++EA  L+ EM  +GL+P   TF  LI+GC K   +E +L    +M+   +     AF  
Sbjct: 298 LKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTV 357

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  LC  G    A  ML   L  GF P++ TY+ ++  + K+G +    KL  EM+   
Sbjct: 358 LISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDG 417

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
             P +  Y +L++ LC+ G+++ A      M +  + P    Y  L+  H + G+
Sbjct: 418 HVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS 472



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 150/330 (45%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           W  Y  +L++   PN      L+   CK G + +   + D I  +   P V+   +LI  
Sbjct: 127 WAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISG 186

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
             +   +EEG  L   M  + +  D   +S ++    K   L+   ++++EM  +G   N
Sbjct: 187 CCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPN 246

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              +T  I   C+ GK++ A    Q M   G++P   T+N LI G  K   ++E+     
Sbjct: 247 GVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 306

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M +  L P    F  +I   C+ G+ + A  +    +++G   +++ ++ LI G  ++G
Sbjct: 307 EMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDG 366

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            + +  ++  +M      P  P YT ++   C+ G +    K  K M+S   VPGV  Y 
Sbjct: 367 RVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYN 426

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+    ++G    A  L + M++ G+ P+
Sbjct: 427 ALMNGLCKQGQVKNAKMLLDAMLNVGVAPN 456



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 111/227 (48%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           LE +   Y E+L  G+  N F +   +  +C+ G +  A  +  E+   GL+P   +FN 
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI GC KA  +EE       M S ++ P    F+ +I  LC+ G   + + +      KG
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN +T++ LI G  K G++   LK +  M  + + P L  Y +LI+ LC+ G L+EA 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +    M +  L P    + +L+    + G+   AL +   MV EG++
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIE 349



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 143/307 (46%), Gaps = 3/307 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E  F +   +E       + +F+ LI+ + K  R D    ++  M      PN  T   L
Sbjct: 194 EEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVL 253

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CKGG++   +     +  +   P ++   +LI  + +   ++E   L+  M    +
Sbjct: 254 IDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGL 313

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I ++ ++    K  ++ESAL +   M++ G   +   +T  I   C  G++ +A  
Sbjct: 314 RPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAER 373

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++++M +AG KP D T+ ++++   K   +       ++M S   +P    +N ++  LC
Sbjct: 374 MLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLC 433

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  K A  +L   L+ G +PN+ITY+ L+ G++K G   +V     E   K +     
Sbjct: 434 KQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSE---KGLVKDYA 490

Query: 305 AYTSLIS 311
           +YT+L++
Sbjct: 491 SYTALVN 497



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 96/195 (49%)

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++E +     E+ ++G  P    FN+L+ G  K   +  +    +++  R L P+  +FN
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I   C+ G  ++   +  +   +   P+  T+S LI G  KEG + E   L+ EM  K
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P    +T LI   C+ GK++ A K F++M +  + P +  Y +L+    + G+  +A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 358 LHLCEEMVSEGLKPS 372
             L  EM + GL+P 
Sbjct: 302 RRLVNEMSASGLRPD 316


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 176/361 (48%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R L++ G S +  +++ ++  +    +     ++    L++  YP+  T   LI A CK 
Sbjct: 170 RVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKE 229

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             +   + + + +  K C P V+    LI    +  R++E +  LK++       D I++
Sbjct: 230 SGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISH 289

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++I+ +         A+ +   ML++G   +   +   I   C+ G + +A  +++ M  
Sbjct: 290 NMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPK 349

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G  P   +FN LI+G    K I+ ++ Y E M+SR   P    +N ++  LC+ G    
Sbjct: 350 HGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDD 409

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L+    KG SP+ I+Y+ +I G  K G+ +  ++L  EM YK + P L   TS++ 
Sbjct: 410 AVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVG 469

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            L + GK+ EA K+F  +K  ++ P   IY S++    +    + A+    +MV++G KP
Sbjct: 470 GLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKP 529

Query: 372 S 372
           +
Sbjct: 530 T 530



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 2/349 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +++   LI    K        +++  M      P+  T   LI   CKGG+L   +  L
Sbjct: 215 DVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFL 274

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++    C P VI +  ++  +    R  + M LL  MLRK  +   + +++++    + 
Sbjct: 275 KKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQK 334

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L  AL V E M K G + NS  +   I  +C    I+ A   ++ M + G  P   T+
Sbjct: 335 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTY 394

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L+    K  ++++++    Q+ S+   PS  ++N +I  L + G A+ A  +L     
Sbjct: 395 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCY 454

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P+ IT + ++GG ++EG+++E +K ++ ++  +I P    Y S+I+ LC+  +   
Sbjct: 455 KGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSL 514

Query: 322 ADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGL 369
           A  +   M +    P    Y +L+ GI  E G    A  L  E+ S GL
Sbjct: 515 AIDFLADMVAKGCKPTEATYTTLIKGITYE-GLAEDASKLSNELYSRGL 562



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 169/360 (46%), Gaps = 3/360 (0%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           Y+  +G S  +I+   LI    K  R     +I   + E+    +  +   LIS  CK G
Sbjct: 104 YMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSG 163

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +++  + +LDR+     SP      +++  +    ++++ M +L R L+     D +  +
Sbjct: 164 EIEEALRVLDRMG---VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCT 220

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++ A  K   +  A+ ++ EM  +G   +   Y   I  +C+ G+++EA   ++++ + 
Sbjct: 221 VLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSY 280

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   + N+++       R  +++     M+ +  LPS   FN +I  LC+ G   +A
Sbjct: 281 GCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKA 340

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L +    G +PN  +++ LI G+     I   ++    M  +   P +  Y  L+++
Sbjct: 341 LNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTA 400

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+ GK+++A      + S    P +  Y +++   L+ G    A+ L EEM  +GLKP 
Sbjct: 401 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 460



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 130/288 (45%), Gaps = 12/288 (4%)

Query: 95  VNTSL---------ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           VNTSL         + R+I+   +EEG   L+ M  K    D IA + ++    K+   +
Sbjct: 72  VNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTK 131

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A  +   + + G   +   Y   I  YC+ G+IEEA   ++ ++  G+ P   T++ ++
Sbjct: 132 NASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA---LRVLDRMGVSPNAATYDAVL 188

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
                  ++++++    + +  K  P       +I   C+     QA  +     +KG  
Sbjct: 189 CSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCK 248

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ +TY+ LI G+ K G + E ++   ++      P + ++  ++ SLC  G+  +A K 
Sbjct: 249 PDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKL 308

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              M     +P V  +  L+    +KG   KAL++ E M   G  P++
Sbjct: 309 LATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 127/283 (44%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + L   G    +IS N ++  +    R     ++   ML     P+  T   LI+ LC+ 
Sbjct: 275 KKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQK 334

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L   +++L+ +     +P       LI      + I+  +  L+ M+ +    D + Y
Sbjct: 335 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTY 394

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++ A  K   ++ A+V+  ++  +G S +   Y T I    + GK E A  L++EM  
Sbjct: 395 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCY 454

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GLKP   T   ++ G ++  ++ E++ +   +    + P+   +N +I  LC+      
Sbjct: 455 KGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSL 514

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           A   L   + KG  P E TY+ LI G   EG  ++  KL  E+
Sbjct: 515 AIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL 557



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 103/228 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A +V   + + G + +  SFN LI         D      + M+    YP+  T  
Sbjct: 336 LLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYN 395

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++ALCK G++   V +L ++  K CSP +I   ++I  +++  + E  + LL+ M  K
Sbjct: 396 ILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYK 455

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I  + +V    +   +  A+  +  + +     N+F+Y + I   C+  +   A
Sbjct: 456 GLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLA 515

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
              + +M   G KP + T+  LI+G       E++     ++ SR L+
Sbjct: 516 IDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 172/387 (44%), Gaps = 35/387 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF    IS+ TLIH + K         + Q +  N+  PN     T+I ++CK   +   
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+   +  K  SP V+  ++LI       ++++ + L  +M+ +N+  D   ++++V A
Sbjct: 245 FDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP- 196
             K   ++    V++ M+K+G   N   Y + +  YC   ++ +A  +   M   G+ P 
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 197 ----------------YDETFNL------------------LIEGCAKAKRIEESLSYCE 222
                           +DE  NL                  LI+G +K+ RI  +L   +
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           QM  R + P+   +N ++  LC+     +A  +LT   DKGF P+  TYS LI G  + G
Sbjct: 425 QMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSG 484

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           ++++  K++ ++  K  +  + AYT +I   C  G   EA      M+ +  +P    YE
Sbjct: 485 KLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYE 544

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGL 369
            ++    +K     A  L  EM++ GL
Sbjct: 545 IIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 166/361 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E RG   +L++ N LI+   +       + ++  +L+    P+  T  TL   LC  GQ
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q      D++         I   +LI  + +       + LL+R+    +  + + Y+ 
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +  K++ +  A  ++ EM+ +G S +   Y+  I  +C  GK+++A  L  +M    
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   TFN+L+    K  +++E  +  + MM + + P+   +N ++   C      +A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G +P+  +YS +I G+ K  +  E + L+ EM  K+I P +  Y+SLI  L
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G++  A +    M    + P +  Y S++    +     KA+ L  +   +G +P  
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDI 470

Query: 374 S 374
           S
Sbjct: 471 S 471



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 163/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L +R  +     FN ++  + KS     V  + Q M      PN      LI+  C+ G 
Sbjct: 76  LLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGL 135

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +  +I      P  I  T+L   +  + +I++  +   +++      D I+Y  
Sbjct: 136 IPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGT 195

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   K+    +AL + + +       N  +Y T I + C+   + EA  L  EM + G
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKG 255

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ LI G     ++++++    +M+   + P    FN ++   C+ G  K+  
Sbjct: 256 ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +  + + +G  PN +TY+ L+ GY    E+ +   ++  M    ++P + +Y+ +I+  
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+  K +EA   FK M   +++P V  Y SL+    + G  + AL L ++M   G+ P+
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/267 (18%), Positives = 115/267 (43%), Gaps = 3/267 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+  +  FD+   + ++G   + +++N+L+         +    I+  M +    P+  +
Sbjct: 311 MKEGKTVFDM---MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I+  CK  +    +++   +H K   P V+  +SLI  + +  RI   + L+ +M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  +   Y+ I+ A  K   ++ A+ +  +   +GF  +   Y+  I   C+ GK+E
Sbjct: 428 DRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLE 487

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  + +++   G       + ++I+G        E+L+   +M     +P    +  +I
Sbjct: 488 DARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPN 267
             L +      A  +L   + +G   N
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGLPLN 574



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +   +  RG   ++ ++N+++  + K+ + D    +     +    P+ +T   LI 
Sbjct: 419 ALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIK 478

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G+L+    + + +  K  +  V   T +I     E    E + LL +M     I 
Sbjct: 479 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           D   Y +I+ +  K    + A  +  EM+ RG   N +
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 179/372 (48%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G+    ++  +L++   + +R      +   M+E    P+      +I
Sbjct: 138 LALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAII 197

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            +LCK  ++   +D    I  K   P V+  T+L+  +    R  +   LL+ M+++ + 
Sbjct: 198 DSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKIT 257

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + I YS ++ A VK   +  A  ++EEM++     +   Y++ I   C + +I+EAN +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
              M + G  P   ++N LI G  KAKR+E+ +    +M  R L+ +   +N +I+   +
Sbjct: 318 FDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQ 377

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+  +A    +     G SP+  TY+ L+GG    G +++ L ++ +M+   +   +  
Sbjct: 378 VGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVT 437

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT++I  +C+ GK+E+A   F  +    L P +  Y +++     KG + +   L  +M 
Sbjct: 438 YTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMK 497

Query: 366 SEGLKPSTSYLC 377
            EGL  + S LC
Sbjct: 498 QEGLMKNDSMLC 509



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 167/344 (48%), Gaps = 2/344 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDM 80
           S++ FN L+  + K  + D+V  + + M E +   N+  T   +I+  C   Q+   + +
Sbjct: 84  SIVDFNRLLSAIVKMKKYDVVISLGKKM-EVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P  +   SL+    +  R+ + + L+ +M+      D +AY+ I+ +  K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            R +  AL  ++E+ ++G   N   YT  +   C  G+  +A  L+++M    + P   T
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ L++   K  ++ E+    E+M+   + P    ++ +I  LC      +AN M  L +
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG  P+ ++Y+ LI G+ K   +++ +KL+ +M  + +      Y +LI    Q G ++
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVD 382

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +A ++F  M S  + P +  Y  L+G   + G   KAL + E+M
Sbjct: 383 KAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM 426



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 171/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ ++V   + + +E  G    L +FN +I+      +  L   +   ML+    P+  T
Sbjct: 98  MKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVT 157

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           I +L++  C+  ++   V ++D++      P ++   ++I  + +  R+ + +   K + 
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIG 217

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           RK +  + + Y+ +V           A  +  +M+KR  + N   Y+  + A+ + GK+ 
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVL 277

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  + +EM    + P   T++ LI G     RI+E+    + M+S+   P   ++N +I
Sbjct: 278 EAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLI 337

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+    +    +      +G   N +TY+ LI G+ + G++ +  + + +M+   +S
Sbjct: 338 NGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVS 397

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y  L+  LC  G LE+A   F+ M+   +   +  Y +++    + G    A  L
Sbjct: 398 PDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGL 457

Query: 361 CEEMVSEGLKPS 372
              +  +GLKP 
Sbjct: 458 FCSLSLKGLKPD 469



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 146/301 (48%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   +++   +   R  P ++    L+  I++ ++ +  + L K+M    + +D   ++
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++        +  AL V  +MLK G+  +     + +  +C   ++ +A  L+ +M   
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P    +N +I+   K +R+ ++L + +++  + + P+   +  ++  LC  G    A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L   + +  +PN ITYS L+  + K G++ E  +++ EM   SI P +  Y+SLI+ 
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC   +++EA++ F +M S    P V  Y +L+    +       + L  +M   GL  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364

Query: 373 T 373
           T
Sbjct: 365 T 365



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 126/270 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           +++ ++ + + L + M++       + ++ ++ A VKM+  +  + + ++M   G   + 
Sbjct: 61  LRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDL 120

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + +   I  +C   ++  A  ++ +M   G +P   T   L+ G  +  R+ +++S  ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P   A+N +I  LC+      A         KG  PN +TY+ L+ G    G 
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
             +  +L  +M  + I+P +  Y++L+ +  + GK+ EA + F+ M   S+ P +  Y S
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L+          +A  + + MVS+G  P  
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDV 330


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 166/338 (49%), Gaps = 2/338 (0%)

Query: 37  DRNDL--VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVI 94
           DR  L    ++    L++  YP+  T   LI A CK   +   + + + + GK C P V+
Sbjct: 183 DRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVV 242

Query: 95  VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM 154
               LI    +E R++E ++ LK++       D I++++I+ +         A+ +   M
Sbjct: 243 TYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM 302

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           L++G   +   +   I   C+ G + +A  +++ M   G  P   +FN LI+G    K I
Sbjct: 303 LRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGI 362

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           + ++ + E M+SR   P    +N ++  LC+ G    A  +L+    KG SP+ I+Y+ +
Sbjct: 363 DRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTV 422

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G  K G+ +  ++L  EM YK + P L   TS++  L + GK+ EA K+F  +K   +
Sbjct: 423 IDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGI 482

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            P   IY S++    +    + A+    +MV+ G KP+
Sbjct: 483 KPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPT 520



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 165/360 (45%), Gaps = 3/360 (0%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           Y+  +G    +++   LI    K  R     RI   + E+    +  +   LI+A CK G
Sbjct: 94  YMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSG 153

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +++  + +LD       +P      +++  +    ++++ M +L R L+     D +  +
Sbjct: 154 EIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCT 210

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++ A  K   +  A+ ++ EM  +G   +   Y   I  +C+ G+++EA   ++++ + 
Sbjct: 211 VLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSY 270

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +    + N+++       R  +++     M+ +   PS   FN +I  LC+ G   +A
Sbjct: 271 GCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKA 330

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L +    G +PN  +++ LI G+     I   ++    M  +   P +  Y  L+++
Sbjct: 331 LNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTA 390

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+ GK+++A      + S    P +  Y +++   L+ G    A+ L EEM  +GLKP 
Sbjct: 391 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 450



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 12/288 (4%)

Query: 95  VNTSL---------ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           VNTSL         + R+I+   +EEG   L+ M  K  I D +A + ++    K+   +
Sbjct: 62  VNTSLNFEESEIHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTK 121

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A  +   + + G   ++  Y   I AYC+ G+IEEA   ++ +++  + P   T++ ++
Sbjct: 122 NATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEA---LRVLDHTSVAPNAATYDAVL 178

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
                  ++++++   ++ +  K  P       +I   C+     QA  +      KG  
Sbjct: 179 CSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCK 238

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ +TY+ LI G+ KEG + E +    ++        + ++  ++ SLC  G+  +A K 
Sbjct: 239 PDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKL 298

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              M      P V  +  L+    +KG   KAL++ E M   G  P++
Sbjct: 299 LATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 346



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/357 (20%), Positives = 156/357 (43%), Gaps = 37/357 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G    ++++N LI    K  R D      + +       +  +   ++ +LC GG+
Sbjct: 232 MRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGR 291

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +L  +  K C P V+    LI  + Q+  + + + +L+ M +     ++ +++ 
Sbjct: 292 WMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNP 351

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++      + ++ A+   E M+ RG   +   Y   + A C+ GK+++A  ++ ++ + G
Sbjct: 352 LIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG 411

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   ++N +I+G  K  + E ++                   E++  +C         
Sbjct: 412 CSPSLISYNTVIDGLLKVGKAELAV-------------------ELLEEMCY-------- 444

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                   KG  P+ IT + ++GG ++EG++ E +K ++ ++   I P    Y S++  L
Sbjct: 445 --------KGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGL 496

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGL 369
           C+  +   A  +   M ++   P    Y +L+ GI  E G   +A  L  E+ S GL
Sbjct: 497 CKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYE-GLAEEASKLSNELYSRGL 552



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 127/283 (44%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + L   G    +IS N ++  +    R     ++   ML    +P+  T   LI+ LC+ 
Sbjct: 265 KKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQK 324

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L   +++L+ +     +P       LI      + I+  +  L+ M+ +    D + Y
Sbjct: 325 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTY 384

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++ A  K   ++ A+V+  ++  +G S +   Y T I    + GK E A  L++EM  
Sbjct: 385 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCY 444

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GLKP   T   ++ G ++  ++ E++ +   +    + P+   +N ++  LC+      
Sbjct: 445 KGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSL 504

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           A   L   +  G  P E +Y+ LI G   EG  +E  KL  E+
Sbjct: 505 AIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/152 (19%), Positives = 63/152 (41%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  +G S SLIS+NT+I  + K  + +L   + + M      P+  T  +++  L + G+
Sbjct: 407 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 466

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   +     + G    P   +  S+++ + + ++    +  L  M+         +Y+ 
Sbjct: 467 VHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTT 526

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           ++         E A  +  E+  RG    S +
Sbjct: 527 LIKGITYEGLAEEASKLSNELYSRGLVKKSLI 558


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 187/370 (50%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ +   L +RG   S++SFN+++  + K  + D    +++ M ++   PN +T   
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNI 259

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC GG+++    +LD +      P ++    ++ R+ +  ++EE   + +   ++ 
Sbjct: 260 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 319

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y  ++    K   ++ A  ++E+ML  G +AN  VYT+ I  +  +G+ E+ +
Sbjct: 320 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 379

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +E+   G KP     N  ++   KA  +E+     E + S   LP   +++ +I  L
Sbjct: 380 KVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A++ + +      +GF+ +   Y+ ++ G+ K G++ +  ++  EM+ K + PT+
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +++  L +  +L+EA   F+  KS  +   V +Y SL+    + G   +A  + EE
Sbjct: 500 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 559

Query: 364 MVSEGLKPST 373
           M+ +GL P+ 
Sbjct: 560 MMKKGLTPNV 569



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 175/373 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A+ +     QRG +   +++ +LI  + K  + D  +R+++ ML+     N    
Sbjct: 303 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 362

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI      G+ +    +   +  + C P + +  + +  + +   +E+G ++ + +  
Sbjct: 363 TSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 422

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              + D  +YS++++   K         ++  M ++GF+ ++  Y   +  +C+ GK+ +
Sbjct: 423 YGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHK 482

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +++EM+   ++P   T+  +++G AK  R++E+    E+  S+ +  +   ++ +I 
Sbjct: 483 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 542

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              + G   +A  +L   + KG +PN  T++ L+    K  EI E L  +  M+     P
Sbjct: 543 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 602

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y+ LI+ LC+  K  +A  +++ M+   LVP V  Y +++    + GN   A  L 
Sbjct: 603 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 662

Query: 362 EEMVSEGLKPSTS 374
           E   + G  P  +
Sbjct: 663 ERFKANGGIPDAA 675



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 162/348 (46%), Gaps = 1/348 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++ +N  I    K+   D+  + +  +      P++ +  ++I  LCK G+L    ++ 
Sbjct: 114 DIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 173

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  +R  P      ++I+      R E+   LL+R+  +  I   ++++ I+    K 
Sbjct: 174 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 233

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           R ++ AL ++E M K+    NS  Y   I   C  G++EEA  ++ EME+A L P   T 
Sbjct: 234 RKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTV 292

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++   KA+++EE+    E    R   P C  +  +I  L + G   +A  +    LD
Sbjct: 293 NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 352

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G + N + Y+ LI  +   G  ++  K++ E+  +   P L    + +  + + G++E+
Sbjct: 353 AGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 412

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
               F+ ++S+  +P V  Y  L+    + G   +  ++   M  +G 
Sbjct: 413 GRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 460



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 147/315 (46%), Gaps = 5/315 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P  +    LI AL +  + +  +++L ++        V + T+L+  + +E ++ + + L
Sbjct: 43  PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 102

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  +    +  D + Y++ +    K  N++ A   + E+  +G   +   YT+ I   C+
Sbjct: 103 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCK 162

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++ EA  L  +ME     P    +N +I G   A R E++    E++  R  +PS  +
Sbjct: 163 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 222

Query: 236 FNEMIRRLCECGNAKQANGMLTL--ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           FN ++  L   G  ++ +  L+L   + K   PN  TY+ +I      G ++E  ++  E
Sbjct: 223 FNSILTCL---GKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDE 279

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           ME+ S+ P L     ++  LC+  KLEEA K F+        P    Y SL+    +KG 
Sbjct: 280 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 339

Query: 354 KAKALHLCEEMVSEG 368
             +A  L E+M+  G
Sbjct: 340 VDEAYRLFEKMLDAG 354



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 113/239 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++Q+GF+L   ++N ++    KS +    + I + M E    P  AT   ++  L K  +
Sbjct: 455 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 514

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     + +    K     V++ +SLI    +  RI+E  ++L+ M++K +  +   ++ 
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 574

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A VK   +  ALV ++ M +     N++ Y+  I   C   K  +A    Q+M+  G
Sbjct: 575 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 634

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           L P   T+  +I G AK   I ++ S  E+  +   +P  ++FN +I  +     A +A
Sbjct: 635 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 125/270 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   + S++ LIH +TK+ +      I+  M +     +      ++   CK G++   
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++L+ +  K   P V    +++  + + +R++E  +L +    K +  + + YS ++  
Sbjct: 484 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 543

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A ++ EEM+K+G + N + + + + A  +  +I EA    Q M+     P 
Sbjct: 544 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 603

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI G  + ++  ++  + + M  + L+P+   +  MI  L + GN   A  +  
Sbjct: 604 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 663

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
                G  P+  +++ LI G +      E 
Sbjct: 664 RFKANGGIPDAASFNALIEGMSNANRAMEA 693



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/399 (20%), Positives = 167/399 (41%), Gaps = 39/399 (9%)

Query: 10  VCRY---LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            C++   L+ +G     +S+ ++I V+ K+ R      ++  M      P      T+I 
Sbjct: 134 ACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 193

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G+ +    +L+R+  + C P V+   S++  + ++ +++E + L + M +K+   
Sbjct: 194 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEP 252

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           ++  Y++I+        +E A  + +EM       N       +   C+  K+EEA  + 
Sbjct: 253 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 312

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS--------------RKLL-- 230
           +     G  P   T+  LI+G  K  +++E+    E+M+               R     
Sbjct: 313 ESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIH 372

Query: 231 ----PSCSAFNEMIRRLC---------------ECGNAKQANGMLTLALDKGFSPNEITY 271
                    F E+IRR C               + G  ++   +       GF P+  +Y
Sbjct: 373 GRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSY 432

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           S LI G  K G+ +E   +++ M+ +  +    AY +++   C+ GK+ +A +  + MK 
Sbjct: 433 SILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE 492

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             + P V  Y ++V    +     +A  L EE  S+G++
Sbjct: 493 KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 531



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 131/276 (47%), Gaps = 1/276 (0%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             L   +++  R+++ ++ +  M R        AY++++ A  + R  E AL +  +M +
Sbjct: 14  ADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQE 73

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G+     ++TT + A    G++ +A  L+ E++ + L+P    +N+ I+   KA  ++ 
Sbjct: 74  VGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 133

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +  +  ++ ++ L P   ++  MI  LC+ G   +A  +      +   P    Y+ +I 
Sbjct: 134 ACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 193

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           GY   G  ++  KL   +  +   P++ ++ S+++ L +  K++EA   F++MK  +  P
Sbjct: 194 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 252

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               Y  ++ +    G   +A  + +EM    L P+
Sbjct: 253 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 288



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 142/327 (43%), Gaps = 10/327 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN+A    L +AL +  +L   V  +  +   +  P     T LI  + +  R E  + L
Sbjct: 9   PNQACA-DLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 67

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L++M           ++ +V A  +   +  AL + +E+       +  +Y   I  + +
Sbjct: 68  LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 127

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G ++ A     E++  GLKP D ++  +I    KA R+ E+     QM + + +P   A
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 187

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N MI      G  + A  +L    ++G  P+ ++++ ++    K+ ++ E L L+ E+ 
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVM 246

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K   P    Y  +I  LC  G++EEA +    M+  SL P +      V I +++  KA
Sbjct: 247 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL----LTVNIMVDRLCKA 302

Query: 356 KALH----LCEEMVSEGLKPSTSYLCS 378
           + L     + E     G  P     CS
Sbjct: 303 RKLEEAYKIFESASQRGCNPDCVTYCS 329



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 98/211 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   ++++    ++ ++  ++  + K DR D  + +++         N     +LI 
Sbjct: 483 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 542

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +L+ +  K  +P V    SL+  +++ E I E +V  + M       
Sbjct: 543 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 602

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T  YS+++    +++    A V +++M K+G   N   YTT I    + G I +A  L 
Sbjct: 603 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 662

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           +  +  G  P   +FN LIEG + A R  E+
Sbjct: 663 ERFKANGGIPDAASFNALIEGMSNANRAMEA 693



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 90/207 (43%)

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++++A   +  M     +P    + +LI   A+A+R E +L    QM           F 
Sbjct: 25  RLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFT 84

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++R L   G    A  ++         P+ + Y+  I  + K G +    K ++E++ +
Sbjct: 85  TLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQ 144

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P   +YTS+I  LC+ G+L EA++ F  M++   VP    Y +++  +   G    A
Sbjct: 145 GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 204

Query: 358 LHLCEEMVSEGLKPSTSYLCSASTCRG 384
             L E +   G  PS     S  TC G
Sbjct: 205 YKLLERLRERGCIPSVVSFNSILTCLG 231


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 169/370 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A DV R +   G   +    ++L++ + K+   +    +++ M E     +     TL
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  L K G +     +   +  K  SP  +V    I  +    +  E    LK M    +
Sbjct: 544 MDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ ++ A+ +      AL + +EM +     N   YTT +    E G +++A  
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKF 663

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM +AG  P   T   +++ C+ ++R +  L   E MM   L    + +N ++  LC
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G A+ A  +L   L +G +P+ IT++ LI G+ K   +     +Y +M ++ +SP + 
Sbjct: 724 CHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIA 783

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + +L+  L   G++ EAD     MK   L P    Y+ LV  + +K NK +AL L  EM
Sbjct: 784 TFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 843

Query: 365 VSEGLKPSTS 374
           VS+G  P  S
Sbjct: 844 VSKGFIPKAS 853



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 172/374 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V + L ++  S   + +N  I+ +    +        + M      P++AT  T+I+
Sbjct: 556 AFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIA 615

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C+ G+    + +L  +      P +I  T+L++ +++   +++   LL  M       
Sbjct: 616 ARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAP 675

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            ++ +  ++ A    R  +  L ++E M+  G  A+  VY T +   C +G    A  ++
Sbjct: 676 TSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVL 735

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+ P   TFN LI G  K+  ++ + +   QM+ + L P+ + FN ++  L   
Sbjct: 736 DEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESA 795

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A+ +L+     G  PN +TY  L+ GYAK+    E L+LY EM  K   P    Y
Sbjct: 796 GRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 855

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SL+S   + G + +A + F  MK   ++     Y+ L+    +  N  +   L ++M  
Sbjct: 856 NSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKE 915

Query: 367 EGLKPSTSYLCSAS 380
            G KPS   + S S
Sbjct: 916 LGFKPSKGTISSMS 929



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 148/321 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  + L+ +  L+  + K  + +    + +H   +   PN  T   L+ A C+ G + 
Sbjct: 355 SRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L ++  K   P V+  +S+I  +++   + +    +++M    +  + + Y  ++
Sbjct: 415 GAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLI 474

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K +  E+AL VY +ML  G  AN+FV  + +    + G IE A  L ++M+  GL 
Sbjct: 475 DGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLL 534

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +  L++G  K   +  +    +++M + L P    +N  I  LC  G   +A   
Sbjct: 535 LDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSF 594

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L    + G  P++ TY+ +I    +EG+  + LKL  EM+  SI P L  YT+L+  L +
Sbjct: 595 LKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLE 654

Query: 316 CGKLEEADKYFKIMKSHSLVP 336
            G +++A      M S    P
Sbjct: 655 AGVVKKAKFLLNEMASAGFAP 675



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 183/403 (45%), Gaps = 35/403 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A +V   ++  G   +++++  LI    K    D  + +Y+ M+ +   P+  T+  L
Sbjct: 239 DAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSAL 298

Query: 65  ISALCKGGQLQ-------------------TYVDMLDRIH------------GKRCSPMV 93
           +  LC+ GQ                     TY  ++D +             G+  S  V
Sbjct: 299 VDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGV 358

Query: 94  IVN----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           +++    T+L+ R+ +E +IEE   +L+     N+  + + Y+++V A  +  N++ A  
Sbjct: 359 VMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQ 418

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V  +M ++    N   +++ I    + G + +A   M++M+++G+ P   T+  LI+G  
Sbjct: 419 VLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFF 478

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K +  E +L     M+   +  +    + ++  L + GN + A  +     ++G   + +
Sbjct: 479 KFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHV 538

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+ L+ G  K G +    K+  E+  K++SP    Y   I+ LC  GK  EA  + K M
Sbjct: 539 NYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEM 598

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++  L P    Y +++     +G  +KAL L +EM    +KP+
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPN 641



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 151/308 (49%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   CK   +   + +++R+  +  +  V+   SL+         +  + +++RM   
Sbjct: 192 ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKAD 251

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + Y+ ++    K + ++ A  +YE M++ G   +    +  +   C  G+  EA
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEA 311

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM+  G+ P   T+  LI+  AKA+R  ESL    +M+SR ++     +  ++ R
Sbjct: 312 YALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDR 371

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G  ++A  +L  A     +PN +TY+ L+  + + G I    ++  +ME KS+ P 
Sbjct: 372 LGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPN 431

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  ++S+I+ L + G L +A  Y + MK   + P V  Y +L+    +   +  AL +  
Sbjct: 432 VVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYR 491

Query: 363 EMVSEGLK 370
           +M+ EG++
Sbjct: 492 DMLHEGVE 499



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 166/367 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +  +G +L ++ +N+L+     S   D    + + M  +   PN  T   LI 
Sbjct: 206 ALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIG 265

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CKG  +     + + +      P V+  ++L+  + ++ +  E   L + M +  +  
Sbjct: 266 EYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAP 325

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y  ++ +  K R    +L +  EM+ RG   +  +YT  +    + GKIEEA  ++
Sbjct: 326 NHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVL 385

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +  ++  + P   T+ +L++   +A  I+ +     QM  + ++P+   F+ +I  L + 
Sbjct: 386 RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKR 445

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A   +    D G +PN +TY  LI G+ K    +  L +Y +M ++ +       
Sbjct: 446 GCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVV 505

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SL++ L + G +E A+  FK M    L+     Y +L+    + GN   A  + +E++ 
Sbjct: 506 DSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME 565

Query: 367 EGLKPST 373
           + L P  
Sbjct: 566 KNLSPDA 572



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 156/362 (43%), Gaps = 37/362 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A    + +   G      ++NT+I    +  +     ++ + M  N   PN  T  T
Sbjct: 588 FSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTT 647

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL-----------ILRIIQEERIEEG 112
           L+  L + G ++    +L+ +     +P  + +  +           ++  I E  +  G
Sbjct: 648 LVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAG 707

Query: 113 M------------------------VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           +                        V+L  ML + +  DTI ++ ++    K  +L++A 
Sbjct: 708 LHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAF 767

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            +Y +ML +G S N   + T +G     G+I EA+ ++ +M+  GL+P + T+++L+ G 
Sbjct: 768 AIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGY 827

Query: 209 A-KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
           A K+ ++E    YCE M+S+  +P  S +N ++    + G   QA  + +    +G    
Sbjct: 828 AKKSNKVEALRLYCE-MVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHT 886

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
             TY  L+ G++K     EV  L  +M+     P+    +S+  +  + G   EA +  K
Sbjct: 887 SSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLK 946

Query: 328 IM 329
            +
Sbjct: 947 TL 948



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 37/254 (14%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT++Y++ + A  +  +   A  V  EM KRG S +    +T +   C  G + EA  L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 187 QEM-ENAGLKPYDET-FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + +    G+   D   +N LI+G  K + +  +L+  E+M +                  
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTT------------------ 215

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                            +G + + + Y+ L+ G+   G+    L++   M+   + P + 
Sbjct: 216 -----------------QGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVV 258

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT+LI   C+   ++EA   ++ M    ++P V    +LV      G  ++A  L  EM
Sbjct: 259 TYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREM 318

Query: 365 VSEGLKPSTSYLCS 378
              G+ P+    C+
Sbjct: 319 DKIGVAPNHVTYCT 332


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 167/377 (44%), Gaps = 35/377 (9%)

Query: 28  TLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
           +++H + K  R    +R  + ML     P++  +  L+  LCK G+     ++  R+  K
Sbjct: 423 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 482

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
                 + + +LI  +    ++ E   ++K ML + +  D I Y+ ++        +E  
Sbjct: 483 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 542

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             + EEM KRG   + + Y   +   C  GK+++A  L  E + +GL     T+ +++EG
Sbjct: 543 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 602

Query: 208 CAKAKRIEE-----------------------------------SLSYCEQMMSRKLLPS 232
             KA RIE+                                   +L   E M S+ +LP+
Sbjct: 603 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 662

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
           C+ ++ +I  +C  G  + A  ++     +GF PN + Y+ LIGGY K G++      + 
Sbjct: 663 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 722

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM   +I P    YT +I   C+ G +E+A+     MK   +VP V  Y  L     +  
Sbjct: 723 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 782

Query: 353 NKAKALHLCEEMVSEGL 369
           +   A  +C++M +EGL
Sbjct: 783 DMDNAFKVCDQMATEGL 799



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 169/369 (45%), Gaps = 1/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A DV   L ++G   SL + N L+  + K++  +    +++ M E    P+  +   
Sbjct: 190 FSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEG-ACPDVFSFTN 248

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ALCKGG+++  +++  ++     SP V+    +I  + Q  R++    L ++M  K 
Sbjct: 249 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 308

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +   Y  ++   +K+   +    V +EM+  GF+ N  V+   I  YC+ G IE A 
Sbjct: 309 VQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGAL 368

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M +  + P   T   L++G  K+ +IE + +  E+++S  L         ++  L
Sbjct: 369 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 428

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+      A     + L + F P+++  + L+ G  K+G+  E  +L++ +  K    + 
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 488

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               +LI  LC  GKL EA +  K M    L      Y +L+     +G       L EE
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548

Query: 364 MVSEGLKPS 372
           M   G++P 
Sbjct: 549 MTKRGIQPD 557



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/439 (21%), Positives = 182/439 (41%), Gaps = 71/439 (16%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE   +V R + + G    + SF  +I+ + K  + +    ++  M +    PN  T   
Sbjct: 225 FEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNC 283

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LC+ G+L    ++ +++  K   P +    +LI  +I+    ++   +L  M+   
Sbjct: 284 IINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSG 343

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + ++ ++    KM N+E AL + + M+ +  +  S    + +  +C+  +IE A 
Sbjct: 344 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 403

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS--------CS- 234
             ++E+ ++GL  + +    ++    K  R   +  + + M+SR   PS        C  
Sbjct: 404 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 463

Query: 235 --------------------------AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                                       N +I  LC  G   +A+ ++   L++G   + 
Sbjct: 464 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 523

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           ITY+ LI G+  EG+++   +L  EM  + I P +  Y  L+  LC  GKL++A K +  
Sbjct: 524 ITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE 583

Query: 329 MKSHSLVPGVD-----------------------------------IYESLVGIHLEKGN 353
            K+  L+  +                                    +Y  ++  H + GN
Sbjct: 584 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 643

Query: 354 KAKALHLCEEMVSEGLKPS 372
            A AL L E M S+G+ P+
Sbjct: 644 VAAALQLLENMKSKGILPN 662



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 143/332 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L ++G   S ++ N LIH +  + +     RI + MLE     +  T   LI   C  G+
Sbjct: 479 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 538

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    + + +  +   P +     L+  +    ++++ + L        +I +   Y +
Sbjct: 539 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 598

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E    ++ E+L +    NS VY   I A+C+ G +  A  L++ M++ G
Sbjct: 599 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 658

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ LI G      +E++    ++M     +P+   +  +I   C+ G    A 
Sbjct: 659 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAE 718

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 +     PN+ TY+ +I GY K G +++   L  +M+   I P +  Y  L +  
Sbjct: 719 STWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGF 778

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           C+   ++ A K    M +  L      Y +LV
Sbjct: 779 CKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 119/265 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++N L+  +    + D   +++     +    N  T   ++   CK  +
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++ + +  K+     IV   +I    Q   +   + LL+ M  K ++ +   YS 
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++    +  +E A  + +EM K GF  N   YT  IG YC+ G+++ A     EM +  
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 728

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+ ++I+G  K   +E++ +   +M    ++P    +N +    C+  +   A 
Sbjct: 729 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 788

Query: 254 GMLTLALDKGFSPNEITYSHLIGGY 278
            +      +G   +EITY+ L+ G+
Sbjct: 789 KVCDQMATEGLPVDEITYTTLVHGW 813



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 5/188 (2%)

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCE--QMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           G  P  +T N L+    KA   E+    CE  ++MS    P   +F  +I  LC+ G  +
Sbjct: 204 GTFPSLKTCNFLLSSLVKANEFEKC---CEVFRVMSEGACPDVFSFTNVINALCKGGKME 260

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +       G SPN +TY+ +I G  + G +    +L  +M  K + P L  Y +LI
Sbjct: 261 NAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALI 320

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           + L +    ++ +     M      P V ++ +L+  + + GN   AL + + M+S+ + 
Sbjct: 321 NGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNIT 380

Query: 371 PSTSYLCS 378
           P++  L S
Sbjct: 381 PTSVTLYS 388


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 171/352 (48%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ FN L+  V K ++ +LV  + + M       +  T    I+  C+  QL   + +L
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++  +SL+      +RI + + L+ +M+      DT  ++ +++     
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + ++M++RG   +   Y T +   C+ G I+ A  L+ +ME A +K     F
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+   K + +E ++    +M ++ + P+   +N +I  LC  G    A+ +L+  L+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +PN +T++ LI  + KEG++ E  KL+ EM  +SI P    Y  LI+  C   +L+E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A + FK M S   +P +  Y +L+    +       + L  EM   GL  +T
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 167/367 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  FE+   +   ++  G S  L +++  I+   +  +  L   +   M++    P+  T
Sbjct: 96  MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C   ++   V ++D++      P     T+LI  +    +  E + L+ +M+
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    D + Y  +V    K  +++ AL +  +M      AN  ++ T I + C+Y  +E
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L  EME  G++P   T+N LI       R  ++      M+ +K+ P+   FN +I
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+ ITY+ LI G+     + E  +++  M  K   
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI+  C+C ++E+  + F+ M    LV     Y +++    + G+   A  +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455

Query: 361 CEEMVSE 367
            ++MVS 
Sbjct: 456 FKQMVSN 462



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 172/372 (46%), Gaps = 3/372 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A ++   +E      +++ FNT+I  + K    ++   ++  M      PN  T  +L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LC  G+      +L  +  K+ +P V+   +LI    +E ++ E   L + M+++++
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DTI Y+L++        L+ A  +++ M+ +    N   Y T I  +C+  ++E+   
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM   GL     T+  +I+G  +A   + +    +QM+S ++      ++ ++  LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A  +           N   Y+ +I G  K G++ E   L+  +   SI P + 
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVV 536

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y ++IS LC    L+EAD  F+ MK    +P    Y +L+  +L   ++A +  L +EM
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596

Query: 365 VSEGLKPSTSYL 376
            S G     S +
Sbjct: 597 RSSGFVGDASTI 608



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 160/355 (45%), Gaps = 3/355 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+     +F TLIH +   ++      +   M++    P+  T  T+++ LCK G +   
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L+++   R    V++  ++I  + +   +E  + L   M  K +  + + Y+ ++  
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                    A  +   ML++  + N   +   I A+ + GK+ EA  L +EM    + P 
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+NLLI G     R++E+    + M+S+  LP+   +N +I   C+C   +    +  
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +G   N +TY+ +I G+ + G+      ++ +M    +   +  Y+ L+  LC  G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           KL+ A   FK ++   +   + IY +++    + G   +A  L     S  +KP 
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPD 534



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 157/342 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
             +A  V   + + G+   +++ ++L++    S R      +   M+E    P+  T  T
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L    +    V ++D++  + C P ++   +++  + +   I+  + LL +M    
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + ++ I+ +  K R++E A+ ++ EM  +G   N   Y + I   C YG+  +A+
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  M    + P   TFN LI+   K  ++ E+    E+M+ R + P    +N +I   
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  M    + K   PN  TY+ LI G+ K   +++ ++L+ EM  + +    
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             YT++I    Q G  + A   FK M S+ +   +  Y  L+
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 135/301 (44%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++   VD+   +   R  P ++    L+  + +  + E  + L ++M    + HD   YS
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           + +    +   L  AL V  +M+K G+  +    ++ +  YC   +I +A  L+ +M   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G KP   TF  LI G     +  E+++  +QM+ R   P    +  ++  LC+ G+   A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L          N + ++ +I    K   ++  + L+ EME K I P +  Y SLI+ 
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  G+  +A +    M    + P V  + +L+    ++G   +A  L EEM+   + P 
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 373 T 373
           T
Sbjct: 363 T 363



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 6/358 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  EVA D+   +E +G   +++++N+LI+ +    R     R+  +MLE    PN  T 
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI A  K G+L     + + +  +   P  I    LI       R++E   + K M+ 
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K+ + +   Y+ ++    K + +E  + ++ EM +RG   N+  YTT I  + + G  + 
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + ++M +  +     T+++L+ G     +++ +L   + +   ++  +   +N MI 
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +C+ G   +A     L       P+ +TY+ +I G   +  +QE   L+ +M+     P
Sbjct: 512 GMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568

Query: 302 TLPAYTSLI-SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
               Y +LI ++L  C +   A+   K M+S   V       SLV   L  G   K+ 
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAE-LIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 169/391 (43%), Gaps = 36/391 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S++++N ++  ++ +       R +  ML +   PN  T   LI ALC  G  +  
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +L  + G  C P V+   +L+    +   ++    L+  ML   +  + + ++ +V  
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E A  V++EM++ G + +   Y T +G YC+ G   EA  +  EM   G+ P 
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSR------------------------------ 227
             TF  LI    KA  +E +++   QM  R                              
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 228 -----KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
                ++ PS   +N +I   C  G   +A  +L     KG  P+ +TYS +I  Y K  
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +     +L  +M  K + P    Y+SLI  LC+  +L +A   FK M    L P    Y 
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           SL+  H ++GN  +AL L ++MV  G+ P  
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDV 500



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/453 (21%), Positives = 182/453 (40%), Gaps = 85/453 (18%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +   G   +++++NTL+    ++   D   R+   ML+    PN  T  ++++
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +CK G+++    + D +  +  +P  +   +L+    +     E + +   M +K ++ 
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI---------------- 170
           D + ++ +++   K  NLE A+ +  +M +RG   N   +T  I                
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 348

Query: 171 -------------------GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
                                YC  G+++EA  L+ EME  GLKP   T++ +I    K 
Sbjct: 349 RGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 408

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                +    +QM+ + +LP    ++ +IR LCE      A+ +    +  G  P+E TY
Sbjct: 409 CDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTY 468

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL------------------ 313
           + LI G+ KEG ++  L L+ +M    + P +  Y+ LI+ L                  
Sbjct: 469 TSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYH 528

Query: 314 --------------------------------CQCGKLEEADKYFKIMKSHSLVPGVDIY 341
                                           C  G + EADK ++ M   +      +Y
Sbjct: 529 EEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVY 588

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             L+  H   GN  KAL   ++M+  G  P+++
Sbjct: 589 SVLIHGHCRAGNVMKALSFHKQMLQRGFAPNST 621



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 165/370 (44%), Gaps = 20/370 (5%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
             + A    R + Q     S++ +N LI+      R D    +   M      P+  T  
Sbjct: 340 FLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYS 399

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+ISA CK     +  ++  ++  K   P  I  +SLI  + +E+R+ +  VL K M++ 
Sbjct: 400 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKL 459

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y+ ++    K  N+E AL ++++M+K G   +   Y+  I    +  +  EA
Sbjct: 460 GLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEA 519

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+ ++ +    P +  ++ L+  C KA+                 L S  A   +++ 
Sbjct: 520 QQLLFKLYHEEPIPANTKYDALMHCCRKAE-----------------LKSVLA---LLKG 559

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C  G   +A+ +    LD+ ++ +   YS LI G+ + G + + L  + +M  +  +P 
Sbjct: 560 FCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPN 619

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             +  SLI  L + G + EAD+  + + +   +   +  ++L+ ++L +GN    L +  
Sbjct: 620 STSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLH 679

Query: 363 EMVSEGLKPS 372
            M  +GL PS
Sbjct: 680 GMAKDGLLPS 689


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 35/366 (9%)

Query: 42  VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
            WR++  M      PN  T   LIS LC  G L+  + +  R+      P  +   +LI 
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            +++  RI+   V+L  M R     + + Y+ ++     + + + A++V   ML+RG SA
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 162 NSFVYTTFIGAYCEYG-----------------------------------KIEEANCLM 186
           N   Y T I  YC+ G                                   K+E A  L 
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + GL P + T+  LI+G  K ++++ + S  E M      P+   +N +I  L + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N   A  +  + +++G  PN +TY+ +I G  K G     L+++ +M  +   P L  Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +SLI +L Q GK+EEA+  F  ++ H L+P    Y  ++  ++  G    A +    M+ 
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 367 EGLKPS 372
            G +P+
Sbjct: 699 AGCQPT 704



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 163/369 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  V   + + G   + ++++TLI+ +  S R +  + + + M+ +   P   T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I ALC  G  +    +   +  K C P V   T+LI  +     ++  + L  RM R  
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +T+ Y+ ++   V+ R ++ A VV   M + G S N   Y   I  YC  G  ++A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +M  M   G      T+N +I+G   +     +L   + M      P   ++ E+I   
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+    + A G+    +D G  PNE+TY+ LI GY K+ ++     L   M+     P +
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI  L +      A++  K+M    + P V  Y +++    + G+ + AL +  +
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 364 MVSEGLKPS 372
           M+ +G  P+
Sbjct: 626 MIEQGCLPN 634



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 156/343 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L +VA  +   + + G   + +++N LI+++ ++ R    + +   M  N   PN  T  
Sbjct: 370 LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYN 429

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +I   C  G  +  + +++ +  +  S  ++   ++I            + +L  M   
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 489

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D  +Y+ ++    K+  +ESA  ++ EM+  G   N   YT  I  YC+  K++ A
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++ M+ +G +P  +T+N+LI G  K      +   C+ M+   + P+   +  MI  
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+   A  M    +++G  PN +TYS LI    +EG+++E   L+ E+E   + P 
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              Y  +I +    GK+E A  +   M      P +  Y  L+
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 153/355 (43%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +L+ +N +I+ + K         I + + E+   P+  T  ++I   C+   L + 
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + +++  + C P  +  ++LI  +    R+ E   L++ M+   ++      +  + A
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              M   E A  ++ +M  +G   N + YT  I   C  G ++ A  L   M   G+ P 
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI    + +RI+ +      M      P+   +NEMI+  C  G+ K+A  ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L +G S N +TY+ +I GY   G     L++   M      P   +YT LI   C+  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K+E A   F  M    L P    Y +L+  + +      A  L E M   G +P+
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 155/359 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L Q G  + L +++ L+  +++      V   Y  ML     PN      +I+ALCK G 
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     ++ ++     SP     TS+IL   ++  ++  + +  +M ++    +T+ YS 
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        +  A  +  EM+  G    +   T  I A C+ G  E+A  L  +M+N G
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 350

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   T+  LI G   +  ++ ++    +M    + P+   +N +I  L E    K A 
Sbjct: 351 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L L    G SPN +TY+ +I GY   G+ ++ + +   M  +  S  L  Y ++I   
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G    A +   +M+     P    Y  L+    +      A  L  EMV +GL P+
Sbjct: 471 CDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPN 529



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 113/267 (42%)

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           +E +   M  L  + +  +     AYS ++    ++    + +  Y  ML  G   N  +
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   I A C+ G + +A  +M+++  + + P   T+  +I G  +   ++ +L    QM 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                P+   ++ +I  LC+ G   +A  ++   +  G  P   T +  I      G  +
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +  +L+ +M+ K   P +  YT+LIS LC  G L+ A   F  M    + P    Y +L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
            I +E      A  +   M   G  P+
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPN 424



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/332 (18%), Positives = 132/332 (39%), Gaps = 28/332 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A ++C+ + + G   +++++  +I  + K+    L   ++  M+E    PN  T  +
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI AL + G+++   ++   +      P  I    +I   I   ++E     L RM++  
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700

Query: 124 MIHDTIAYSLIVYA--------------------------KVKMRNLESALVVYEEMLKR 157
                  Y +++                            +   ++  S +      L  
Sbjct: 701 CQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDP 760

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G S    V    +      G+  EAN L+  M + GL P  E +N L+    + + ++ +
Sbjct: 761 GLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 818

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   + M ++      + + E+I  LC+    K+A       L + ++P+++  + LI G
Sbjct: 819 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             ++G     ++  + ME +   P+   YT L
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 52/105 (49%)

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             YS L+   ++ G    V+  Y+ M  + + P L  Y ++I++LC+ G + +A+   K 
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +    + P    Y S++  H  K +   AL +  +M  EG +P+T
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 75/165 (45%)

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           V V  +L+  +    R  E   LL  M+ + +  D  AY+ ++ + +++RN++ A+ V++
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
            M  +G   +   Y   I A C+  + +EA    + M      P D    +LI+G  +  
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             +  + +   M +R+ +PS   +  + R   +  + K   G +T
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCIT 928


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 167/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG    ++++N++I  + K+   D    +   M++N   P+  T  +++   C  GQ +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++      P V+  + L+  + +  R  E   +   M ++ +  +   Y  ++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   + +V++  I AY + GK+++A  +  +M   GL 
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 403

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  +I    K+ R+E+++ Y EQM+   L P    +N +I  LC C   ++A  +
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   N I ++ +I  + KEG + E  KL+  M    + P +  Y +LI+  C 
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA K    M S  L P    Y +L+  + +      AL L +EM S G+ P 
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 182/379 (48%), Gaps = 4/379 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M E    PN  +  
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162

Query: 63  TLISALCKGGQLQTYVDMLDRI---HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
            L+  LC   + Q  +++L  +    G    P V+  T++I    +E   ++       M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + ++ D + Y+ I+ A  K + ++ A+ V   M+K G   +   Y + +  YC  G+ 
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA   +++M + G++P   T++LL++   K  R  E+    + M  R L P  + +  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           ++     G   + +G+L L +  G  P+   +S LI  YAK+G++ + + ++ +M  + +
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P    Y ++I  LC+ G++E+A  YF+ M    L PG  +Y SL+          +A  
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 360 LCEEMVSEGLKPSTSYLCS 378
           L  EM+  G+  +T +  S
Sbjct: 463 LILEMLDRGICLNTIFFNS 481



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 167/356 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    ++S+ T+I+   K   +D  +  Y  ML+    P+  T  ++I+ALCK   +   
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L+ +      P  +   S++       + +E +  LK+M    +  D + YSL++  
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K      A  +++ M KRG       Y T +  Y   G + E + L+  M   G+ P 
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              F++LI   AK  ++++++    +M  + L P+   +  +I  LC+ G  + A     
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +D+G SP  I Y+ LI G     + +   +L  EM  + I      + S+I S C+ G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++ E++K F++M    + P V  Y +L+  +   G   +A+ L   MVS GLKP+T
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 162/338 (47%), Gaps = 6/338 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G     +++N+++H    S +        + M  +   P+  T   L+ 
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+      + D +  +   P +    +L+     +  + E   LL  M+R  +  
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +S+++ A  K   ++ A++V+ +M ++G + N+  Y   IG  C+ G++E+A    
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429

Query: 187 QEMENAGLKPYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           ++M + GL P +  +N LI G   C K +R EE +    +M+ R +  +   FN +I   
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSH 486

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   ++  +  L +  G  PN ITY+ LI GY   G++ E +KL   M    + P  
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             Y++LI+  C+  ++E+A   FK M+S  + P +  Y
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 4/325 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+ LI    K  + D    ++  M +    PN  T   +I  LCK G+++  +   +++ 
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  SP  IV  SLI  +    + E    L+  ML + +  +TI ++ I+ +  K   + 
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  ++E M++ G   N   Y T I  YC  GK++EA  L+  M + GLKP   T++ LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+E++L   ++M S  + P    +N +++ L +      A  +     + G  
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     + L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673

Query: 326 FKIMKSHSLVPGVDIY----ESLVG 346
           F    S+ LVP    Y    E+++G
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIG 698



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 169/411 (41%), Gaps = 43/411 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE---NIRYPNEATI 61
           E A  V   L +RG   S+   N  +  V +      V R Y  M     +   P+  T 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-------- 113
             LI   C+ G+L      L  +  K      I  T L+  +  ++R  + M        
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 114 ------------VLLKRMLRKN-------MIH------------DTIAYSLIVYAKVKMR 142
                       +LLK +  +N       ++H            D ++Y+ ++    K  
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           + + A   Y EML RG   +   Y + I A C+   +++A  ++  M   G+ P   T+N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++ G   + + +E++ + ++M S  + P    ++ ++  LC+ G   +A  +      +
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P   TY  L+ GYA +G + E+  L   M    I P    ++ LI +  + GK+++A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              F  M+   L P    Y +++GI  + G    A+   E+M+ EGL P  
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 158/359 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++ TL+           +  +   M+ N  +P+      LI A  K G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +  ++  +  +P  +   ++I  + +  R+E+ M+  ++M+ + +    I Y+ 
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++        E A  +  EML RG   N+  + + I ++C+ G++ E+  L + M   G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+N LI G   A +++E++     M+S  L P+   ++ +I   C+    + A 
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G SP+ ITY+ ++ G  +        +LY  +        L  Y  ++  L
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+    ++A + F+ +    L      +  ++   L+ G   +A  L     S GL P+
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 9/327 (2%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y EQ    G S   I +N+LIH +   ++ +    +   ML+     N     ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   +++ RI  K   P VI   +LI       +++E M LL  M+  
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVK---PNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +T+ YS ++    K+  +E ALV+++EM   G S +   Y   +    +  +   A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K K  +++L   + +    L      FN MI  
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  PN  TY  +      +G ++E+ +L+  ME    +  
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM 329
                 ++  L Q G++  A  Y  ++
Sbjct: 721 SGMLNFIVRELLQRGEITRAGTYLSMI 747



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 3/307 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  L+ I FN++I    K  R     ++++ M+     PN  T  TLI+  C  G++ 
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +L  +      P  +  ++LI    +  R+E+ +VL K M    +  D I Y++I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               + R   +A  +Y  + + G       Y   +   C+    ++A  + Q +    LK
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               TFN++I+   K  R +E+        S  L+P+   +  M   +   G  ++ + +
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT-SLISSLC 314
                D G + +    + ++    + GEI         ++ K  S  L A T SL   L 
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS--LEASTASLFIDLL 766

Query: 315 QCGKLEE 321
             GK +E
Sbjct: 767 SGGKYQE 773


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 35/387 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S+   +  +++H + K  R    +R  + ML     P++  +  L+  LCK G+    
Sbjct: 390 GLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEA 449

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++  R+  K      + + +LI  +    ++ E   ++K ML + +  D I Y+ ++  
Sbjct: 450 TELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILG 509

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 +E    + EEM KRG   + + Y   +   C  GK+++A  L  E + +GL   
Sbjct: 510 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 569

Query: 198 DETFNLLIEGCAKAKRIEE-----------------------------------SLSYCE 222
             T+ +++EG  KA RIE+                                   +L   E
Sbjct: 570 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 629

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            M S+ +LP+C+ ++ +I  +C  G  + A  ++     +GF PN + Y+ LIGGY K G
Sbjct: 630 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLG 689

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           ++      + EM   +I P    YT +I   C+ G +E+A+     MK   +VP V  Y 
Sbjct: 690 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYN 749

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGL 369
            L     +  +   A  +C++M +EGL
Sbjct: 750 VLTNGFCKANDMDNAFKVCDQMATEGL 776



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 168/369 (45%), Gaps = 1/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A DV   L ++G   SL + N  +  + K++  +    +++ M E    P+  +   
Sbjct: 167 FSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEG-ACPDVFSFTN 225

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ALCKGG+++  +++  ++     SP V+    +I  + Q  R++    L ++M  K 
Sbjct: 226 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 285

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +   Y  ++   +K+   +    + +EM+  GF+ N  V+   I  YC+ G IE A 
Sbjct: 286 VQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M +  + P   T   L++G  K+ +IE + +  E+++S  L         ++  L
Sbjct: 346 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 405

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+      A     + L + F P+++  + L+ G  K+G+  E  +L++ +  K    + 
Sbjct: 406 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 465

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
               +LI  LC  GKL EA +  K M    L      Y +L+     +G       L EE
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525

Query: 364 MVSEGLKPS 372
           M   G++P 
Sbjct: 526 MTKRGIQPD 534



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/439 (21%), Positives = 182/439 (41%), Gaps = 71/439 (16%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE   +V R + + G    + SF  +I+ + K  + +    ++  M +    PN  T   
Sbjct: 202 FEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNC 260

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LC+ G+L    ++ +++  K   P +    +LI  +I+    ++   +L  M+   
Sbjct: 261 IINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAG 320

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + ++ ++    KM N+E AL + + M+ +  +  S    + +  +C+  +IE A 
Sbjct: 321 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAE 380

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS--------CS- 234
             ++E+ ++GL  + +    ++    K  R   +  + + M+SR   PS        C  
Sbjct: 381 NALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGL 440

Query: 235 --------------------------AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                                       N +I  LC  G   +A+ ++   L++G   + 
Sbjct: 441 CKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDR 500

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           ITY+ LI G+  EG+++   +L  EM  + I P +  Y  L+  LC  GKL++A K +  
Sbjct: 501 ITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE 560

Query: 329 MKSHSLVPGVD-----------------------------------IYESLVGIHLEKGN 353
            K+  L+  +                                    +Y  ++  H + GN
Sbjct: 561 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 620

Query: 354 KAKALHLCEEMVSEGLKPS 372
            A AL L E M S+G+ P+
Sbjct: 621 VAAALQLLENMKSKGILPN 639



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 143/332 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L ++G   S ++ N LIH +  + +     RI + MLE     +  T   LI   C  G+
Sbjct: 456 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 515

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    + + +  +   P +     L+  +    ++++ + L        +I +   Y +
Sbjct: 516 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 575

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E    ++ E+L +    NS VY   I A+C+ G +  A  L++ M++ G
Sbjct: 576 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 635

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ LI G      +E++    ++M     +P+   +  +I   C+ G    A 
Sbjct: 636 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAE 695

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 +     PN+ TY+ +I GY K G +++   L  +M+   I P +  Y  L +  
Sbjct: 696 STWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGF 755

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           C+   ++ A K    M +  L      Y +LV
Sbjct: 756 CKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 119/265 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++N L+  +    + D   +++     +    N  T   ++   CK  +
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++ + +  K+     IV   +I    Q   +   + LL+ M  K ++ +   YS 
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++    +  +E A  + +EM K GF  N   YT  IG YC+ G+++ A     EM +  
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 705

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+ ++I+G  K   +E++ +   +M    ++P    +N +    C+  +   A 
Sbjct: 706 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 765

Query: 254 GMLTLALDKGFSPNEITYSHLIGGY 278
            +      +G   +EITY+ L+ G+
Sbjct: 766 KVCDQMATEGLPVDEITYTTLVHGW 790



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 5/188 (2%)

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCE--QMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           G  P  +T N  +    KA   E+    CE  ++MS    P   +F  +I  LC+ G  +
Sbjct: 181 GTFPSLKTCNFXLSSLVKANEFEKC---CEVFRVMSEGACPDVFSFTNVINALCKGGKME 237

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +       G SPN +TY+ +I G  + G +    +L  +M  K + P L  Y +LI
Sbjct: 238 NAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALI 297

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           + L +    ++ +     M      P V ++ +L+  + + GN   AL + + M+S+ + 
Sbjct: 298 NGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNIT 357

Query: 371 PSTSYLCS 378
           P++  L S
Sbjct: 358 PTSVTLYS 365


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 169/359 (47%), Gaps = 1/359 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+QR  S +++++N++I  + K+   D    +   M+++   P+  T  +++   C  GQ
Sbjct: 115 LDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 173

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +  +  L ++      P V+   SL+  + +  R  E   +   M ++ +  +   Y  
Sbjct: 174 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGT 233

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        L     + + M++ G   N +V++  + AY +  K+EEA  +  +M   G
Sbjct: 234 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 293

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+  +I    K+ R+E+++ Y EQM+   L P    +N +I  LC C   ++A 
Sbjct: 294 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 353

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++   LD+G   N I ++ +I  + KEG + E  KL+  M    + P +  Y++LI   
Sbjct: 354 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 413

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  GK++EA K    M S  + P    Y +L+  + +      AL L  EM S G+ P 
Sbjct: 414 CLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPD 472



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 162/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++S++T+I+   K    D  +  Y  ML+    PN  T  ++I+ALCK   +   +++L
Sbjct: 87  DVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVL 146

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +      P  +   S++       + +E +V LK+M    +  D + Y+ ++    K 
Sbjct: 147 TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN 206

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  +++ M KRG       Y T +  Y   G + E + L+  M   G+ P    F
Sbjct: 207 GRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 266

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++L+   AK +++EE++    +M  + L P+   +  +I  LC+ G  + A       +D
Sbjct: 267 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 326

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G SP  I Y+ LI G     + +   +L  EM  + I      + S+I S C+ G++ E
Sbjct: 327 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++K F +M    + P +  Y +L+  +   G   +A  L   MVS G+KP 
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 437



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 162/338 (47%), Gaps = 6/338 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G     +++N+++H    S +        + M  +   P+  T  +L+ 
Sbjct: 142 AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 201

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+      + D +  +   P +    +L+     +  + E   LL  M+R  +  
Sbjct: 202 YLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 261

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   +S++V A  K   +E A++V+ +M ++G + N+  Y   IG  C+ G++E+A    
Sbjct: 262 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 321

Query: 187 QEMENAGLKPYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           ++M + GL P +  +N LI G   C K +R EE +    +M+ R +  +   FN +I   
Sbjct: 322 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSH 378

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   ++  +  L +  G  P+ ITYS LI GY   G++ E  KL   M    + P  
Sbjct: 379 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDC 438

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             Y++LI+  C+  ++++A   F+ M+S  + P +  Y
Sbjct: 439 VTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITY 476



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 174/379 (45%), Gaps = 21/379 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIR 62
           E A  V   L +RG    + S+N L++ +   +R+     +   M ++     P+  +  
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 63  TLISALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           T+I+   K G L     TY +MLD    +R SP V+   S+I  + + + +++ M +L  
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLD----QRISPNVVTYNSIIAALCKAQTVDKAMEVLTT 148

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M++  ++ D + Y+ IV+        + A+V  ++M   G   +   Y + +   C+ G+
Sbjct: 149 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 208

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
             EA  +   M   GLKP   T+  L++G A    + E     + M+   + P+   F+ 
Sbjct: 209 CTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 268

Query: 239 MIRRLCECGNAKQAN---GMLTLA--LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           ++     C  AKQ      ML  +    +G +PN +TY  +IG   K G +++ +  + +
Sbjct: 269 LV-----CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 323

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M  + +SP    Y SLI  LC C K E A++    M    +      + S++  H ++G 
Sbjct: 324 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 383

Query: 354 KAKALHLCEEMVSEGLKPS 372
             ++  L + MV  G+KP 
Sbjct: 384 VIESEKLFDLMVRIGVKPD 402



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 148/321 (46%), Gaps = 1/321 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + +   G    ++++N+L+  + K+ R     +I+  M +    P   T  TL+      
Sbjct: 182 KKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATK 241

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L     +LD +      P   V + L+    ++E++EE M++  +M ++ +  + + Y
Sbjct: 242 GALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTY 301

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
             ++    K   +E A++ +E+M+  G S  + VY + I   C   K E A  L+ EM +
Sbjct: 302 GAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLD 361

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+      FN +I+   K  R+ ES    + M+   + P    ++ +I   C  G   +
Sbjct: 362 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 421

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L   +  G  P+ +TYS LI GY K   +++ L L+ EME   +SP +  Y  ++ 
Sbjct: 422 ATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQ 481

Query: 312 SLCQCGKLEEADK-YFKIMKS 331
            L Q  +   A + Y  I KS
Sbjct: 482 GLFQTRRTAAAKELYVGITKS 502



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 149/325 (45%), Gaps = 4/325 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+ L+    K ++ +    ++  M +    PN  T   +I  LCK G+++  +   +++ 
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  SP  IV  SLI  +    + E    L+  ML + +  +TI ++ I+ +  K   + 
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   +   Y+T I  YC  GK++EA  L+  M + G+KP   T++ LI
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R++++L    +M S  + P    +N +++ L +      A  +       G  
Sbjct: 446 NGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQ 505

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     + L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 506 LELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 565

Query: 326 FKIMKSHSLVPGVDIY----ESLVG 346
           F    S+ LVP    Y    E+++G
Sbjct: 566 FVAFSSNGLVPNYWTYRLMAENIIG 590



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/359 (20%), Positives = 157/359 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++ TL+           +  +   M+ N  +PN      L+ A  K  +
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +  ++  +  +P  +   ++I  + +  R+E+ M+  ++M+ + +    I Y+ 
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 338

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++        E A  +  EML RG   N+  + + I ++C+ G++ E+  L   M   G
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 398

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T++ LI+G   A +++E+      M+S  + P C  ++ +I   C+    K A 
Sbjct: 399 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDAL 458

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G SP+ ITY+ ++ G  +        +LY  +        L  Y  ++  L
Sbjct: 459 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGL 518

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+    ++A + F+ +    L      +  ++   L+ G   +A  L     S GL P+
Sbjct: 519 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/364 (21%), Positives = 148/364 (40%), Gaps = 43/364 (11%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  V   + Q+G + + +++  +I ++ KS R +     ++ M++    P      +L
Sbjct: 280 EEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 339

Query: 65  ISALCKGGQLQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           I  LC   + +      ++MLDR     C   +  N S+I    +E R+ E   L   M+
Sbjct: 340 IHGLCTCNKWERAEELILEMLDR---GICLNTIFFN-SIIDSHCKEGRVIESEKLFDLMV 395

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R  +  D I YS ++        ++ A  +   M+  G   +   Y+T I  YC+  +++
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455

Query: 181 EANCLMQEMENAGLKP----YD-------------------------------ETFNLLI 205
           +A  L +EME++G+ P    Y+                                T+N+++
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIIL 515

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K K  +++L   + +    L      FN MI  L + G   +A  +       G  
Sbjct: 516 HGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 575

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN  TY  +      +G ++E+ +L+  ME    +        ++  L Q G++  A  Y
Sbjct: 576 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 635

Query: 326 FKIM 329
             ++
Sbjct: 636 LSMI 639


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 170/380 (44%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A  V   L+  G   S+ ++N+++    ++ R D VW +Y  M+E+    +  T+ 
Sbjct: 207 LVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVG 266

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+ A C   ++    ++L R+      P       LI    +++       LL  M+ +
Sbjct: 267 YLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIAR 326

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N   D   Y  +V    K         V++++  RG++ +  +YTT I   C    + +A
Sbjct: 327 NRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDA 386

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM   G  P + T+N +I G  K   +EE+     +M  +       ++N MI+ 
Sbjct: 387 RKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKG 446

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G  K+A+ +      KG   N ITY+ L+ G+ KEG+I E   L YE+  + I P+
Sbjct: 447 LCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPS 506

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             +Y  LI  LCQ G ++ A   +  M++  + P V  ++ ++    ++G   + +    
Sbjct: 507 AASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLT 566

Query: 363 EMVSEGLKPSTSYLCSASTC 382
            M+   L+P      S   C
Sbjct: 567 TMLRSKLRPQKKSFESLIQC 586



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 11/363 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQL 74
           Q GFS    S N L   + ++   +      +  L++  + P  A++   I  LCKGG +
Sbjct: 153 QSGFSPDSSSCNVLFDALVEAGACNAA----KSFLDSTNFNPKPASLEAYIRCLCKGGLV 208

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +  + +  ++ G      +    S++   ++  RI+    L   M+  +++ D      +
Sbjct: 209 EEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYL 268

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE---YGKIEEANCLMQEMEN 191
           V A      +     +   +L+ G    +  +   I  +C+   YG++ +   L+  M  
Sbjct: 269 VQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSD---LLHSMIA 325

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
               P   T+  ++ G  K  +  E     + +  R   P    +  MI  LC       
Sbjct: 326 RNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGD 385

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    + KGF PNE TY+ +I GY K G ++E  K+Y EM  K       +Y  +I 
Sbjct: 386 ARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIK 445

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  GK++EA   F+ M    ++     Y +LV    ++G   +  +L  E++ +G++P
Sbjct: 446 GLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQP 505

Query: 372 STS 374
           S +
Sbjct: 506 SAA 508



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/330 (20%), Positives = 137/330 (41%), Gaps = 43/330 (13%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ----LQTYVDM 80
           +FN LI    K      V  +   M+   R P+  T + +++ LCKGG+     + + D+
Sbjct: 299 AFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDL 358

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
            DR +    +P  ++ T++I  + + + + +   L   M++K  + +   Y+ +++   K
Sbjct: 359 KDRGY----APDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFK 414

Query: 141 MRNLESALVVYEEMLKRGFSA-----------------------------------NSFV 165
           + NLE A  +Y EM  +G+                                     N   
Sbjct: 415 IGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHIT 474

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   +  +C+ GKI E   L+ E+ + G++P   ++  LI+   +   ++ +    + M 
Sbjct: 475 YNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQ 534

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           +R + P+    + MI   C+ G A +    LT  L     P + ++  LI   ++   + 
Sbjct: 535 NRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLD 594

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           + L +   M       ++    SL++ LC+
Sbjct: 595 DALLVLDSMLKIGFRLSISICNSLVTKLCE 624



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 108/230 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q+GF  +  ++N +IH   K    +  W++Y+ M +        +   +I  LC  G+++
Sbjct: 395 QKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIK 454

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              D+ + +  K      I   +L+    +E +I EG  LL  +L + +     +Y+ ++
Sbjct: 455 EAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLI 514

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +  ++++A +++++M  RG       +   I  +C+ G   E    +  M  + L+
Sbjct: 515 DKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLR 574

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           P  ++F  LI+  ++  R++++L   + M+      S S  N ++ +LCE
Sbjct: 575 PQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCE 624



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 74/169 (43%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +  +G   + I++N L+    K  +      +   +L+    P+ A+   LI 
Sbjct: 456 AHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLID 515

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G +Q    + D +  +   P V  +  +I    ++    EGM  L  MLR  +  
Sbjct: 516 KLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRP 575

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              ++  ++    ++  L+ AL+V + MLK GF  +  +  + +   CE
Sbjct: 576 QKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCE 624


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 172/359 (47%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG   +L+++  +++ + K    DL + +   M       N     T+I +LCK     
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  K   P VI  +SLI  +   ER  +   LL  M+ + +  + + ++ ++
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A VK   L  A  +Y+EM+KR    + F Y++ I  +C + +++EA  + + M +    
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  KAKRI+E +    +M  R L+ +   +  +I    +  +   A  +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  PN +TY+ L+ G  K G++++ + ++  ++   + PT+  Y  +I  +C+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            GK+E+    F  +    + P V IY +++     KG K +A  L  +M  +G  P + 
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 172/352 (48%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+  FN L+  + K  + DLV  + + M       N  T   LI+  C+  Q+   + +L
Sbjct: 84  SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++  +SL+      +RI + + L+ +M+      DTI ++ +++     
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + + M++RG   N   Y   +   C+ G I+ A  L+ +ME A ++     +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + +I+   K +  +++L+   +M ++ + P+   ++ +I  LC       A+ +L+  ++
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +  +PN +T++ LI  + KEG++ E  KLY EM  +SI P +  Y+SLI+  C   +L+E
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A   F++M S    P V  Y +L+    +     + + L  EM   GL  +T
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 177/372 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ F++   +   +++ G S +L ++N LI+   +  +  L   +   M++    P+  T
Sbjct: 98  MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  I  T+LI  +    +  E + L+ RM+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    + + Y ++V    K  +++ A  +  +M      AN  +Y+T I + C+Y   +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  EMEN G++P   T++ LI      +R  ++      M+ RK+ P+   FN +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TYS LI G+     + E   ++  M  K   
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI+  C+  +++E  + F+ M    LV     Y +L+    +  +   A  +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P+
Sbjct: 458 FKQMVSDGVHPN 469



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 163/355 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+++ ++L++      R      +   M+E    P+  T  TLI  L    +    
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V ++DR+  + C P ++    ++  + +   I+    LL +M    +  + + YS ++ +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R+ + AL ++ EM  +G   N   Y++ I   C Y +  +A+ L+ +M    + P 
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TFN LI+   K  ++ E+    ++M+ R + P    ++ +I   C      +A  M  
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           L + K   PN +TY+ LI G+ K   I E ++L+ EM  + +      YT+LI    Q  
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + A   FK M S  + P +  Y +L+    + G   KA+ + E +    ++P+
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 504



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 156/332 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++AF++   +E      +++ ++T+I  + K    D    ++  M      PN  T  +L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LC   +      +L  +  ++ +P V+   +LI   ++E ++ E   L   M+++++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   YS ++        L+ A  ++E M+ +    N   Y T I  +C+  +I+E   
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM   GL     T+  LI G  +A+  + +    +QM+S  + P+   +N ++  LC
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +          P   TY+ +I G  K G++++   L+  +  K + P + 
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            Y ++IS  C+ G  EEAD  F+ M+    +P
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLP 573



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 159/358 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G+    I+F TLIH +   ++      +   M++    PN  T   +++ LCK G + 
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              ++L+++   +    V++ +++I  + +    ++ + L   M  K +  + I YS ++
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                      A  +  +M++R  + N   +   I A+ + GK+ EA  L  EM    + 
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++ LI G     R++E+    E M+S+   P+   +N +I   C+     +   +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G   N +TY+ LI G+ +  +      ++ +M    + P +  Y +L+  LC+
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE+A   F+ ++   + P +  Y  ++    + G       L   +  +G+KP  
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 136/270 (50%), Gaps = 3/270 (1%)

Query: 4   FEVAFDVCRYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +E   D  R L    +R  + ++++FN LI    K  +     ++Y  M++    P+  T
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +LI+  C   +L     M + +  K C P V+   +LI    + +RI+EG+ L + M 
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++ ++ +T+ Y+ +++   + R+ ++A +V+++M+  G   N   Y T +   C+ GK+E
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  + + ++ + ++P   T+N++IEG  KA ++E+       +  + + P    +N MI
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C  G  ++A+ +     + G  P+  T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 131/285 (45%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P +     L+  I + ++ +  + L ++M R  + H+   Y++++    +   +  A
Sbjct: 80  RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 139

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L +  +M+K G+  +    ++ +  YC   +I +A  L+ +M   G +P   TF  LI G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                +  E+++  ++M+ R   P+   +  ++  LC+ G+   A  +L          N
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            + YS +I    K     + L L+ EME K + P +  Y+SLIS LC   +  +A +   
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M    + P V  + +L+   +++G   +A  L +EM+   + P 
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 119/275 (43%), Gaps = 35/275 (12%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           ++++ + L   M++   +     ++ ++ A  KM+  +  + + E+M + G S N + Y 
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I  +C   +I  A  L+ +M   G +P   T + L+ G    KRI ++++  +QM   
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM--- 181

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
                                           ++ G+ P+ IT++ LI G     +  E 
Sbjct: 182 --------------------------------VEMGYRPDTITFTTLIHGLFLHNKASEA 209

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           + L   M  +   P L  Y  +++ LC+ G ++ A      M++  +   V IY +++  
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
             +  ++  AL+L  EM ++G++P+     S  +C
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 177/360 (49%), Gaps = 8/360 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDM 80
            +I+FN L+  + KS R +  ++I++ M  + +  PN  T  T+I+ LCK G+L   +++
Sbjct: 99  DIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL 158

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           LD ++   C P VI  + L+  + +  R ++G  LL+ M R+    D I Y+ ++    K
Sbjct: 159 LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            R L+ AL + + M++ G       Y + +  +C   +++ A  L+Q M   G  P    
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA------KQANG 254
           +N +I G  +  R++++ +  +QM++ + +P    ++ +I  LC+          + A  
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L +    G  PN  TY+ +I G  +  + Q+ L L   M    + P L +++ +I SLC
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +   L+ A K F +M      P    Y +L+    + G   KA+ + E MV E  +P  +
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVA 457



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 164/339 (48%), Gaps = 30/339 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F + + + +RGF   +I +NTL++ + KS R D    + Q M+ +  YP   T  +L+ 
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+  Q+     ++  +  + C P VI   ++I  + ++ R+++   LLK+M+    + 
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS I+    K   +++                               K+E A  ++
Sbjct: 310 DVITYSTIIDGLCKDWRVDADW-----------------------------KLEAACEIL 340

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M+  G  P   T+ ++IEG  +A++ +++L+   +M+  +++P  S+F+ +I  LC+ 
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +   A  +  +  ++   PN + Y+ LI G +K GE+ + +++ +E+  +S  P +  Y
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV-FELMVESFRPGVATY 459

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            S++  LC  G++EEA +  + M      P    Y +L+
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 1/291 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PNE T  +LI  LCK G+L    ++LD +  +   P V V+  +I  + +  R  + +  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS-ANSFVYTTFIGAYC 174
            K +       D I ++++V A VK   +E A  ++E M        N   YTT I   C
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + GK++ A  L+  M   G  P   T+++L+EG  KA R ++  +  ++M  R   P   
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N ++  LC+     +A  ++ L +  G  P  +TY+ L+  + +  ++    +L   M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +   P +  Y ++I+ LC+  +L++A    K M +   VP V  Y +++
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/357 (21%), Positives = 159/357 (44%), Gaps = 7/357 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++ +LIH + K+ + D  + +   M +    P  A    +I  LCK G+    +     +
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKNMIHDTIAYSLIVYAKVKMRN 143
            G +C+P +I    L+  +++  R+EE   + + M      + + + Y+ ++    K   
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ + + M + G   N   Y+  +   C+ G+ ++   L+QEM   G +P    +N 
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+ G  K++R++E+L   + M+     P+   +N ++   C      +A  ++ +  ++G
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ------CG 317
             P+ I Y+ +I G  ++  + +   L  +M      P +  Y+++I  LC+        
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADW 331

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           KLE A +  ++MK     P    Y  ++          +AL L   M+   + P  S
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 166/359 (46%), Gaps = 7/359 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ T+I+ + K  + D    +   M E    PN  T   L+  LCK G+      +L
Sbjct: 135 NVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLL 194

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +   P VI+  +L+  + +  R++E + L++ M+R       + Y+ ++    + 
Sbjct: 195 QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRS 254

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           + ++ A  + + M +RG   +   Y T I   C   ++++A  L+++M  A   P   T+
Sbjct: 255 KQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITY 314

Query: 202 NLLIEGCAKAKRI------EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           + +I+G  K  R+      E +    E M      P+   +  +I  LC    ++QA  +
Sbjct: 315 STIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALAL 374

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   +D    P+  ++S +IG   K  ++    K++  M  +   P   AY +LI  L +
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            G++++A + F++M   S  PGV  Y S++      G   +A+ + E M+ +   P  +
Sbjct: 435 GGEVDKAVRVFELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 1/250 (0%)

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + +   Y  +++   K   L+ A  + +EM  RG      V+   I   C+ G+  +A  
Sbjct: 27  VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG 86

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRL 243
             + +      P   TFN+L++   K+ R+EE+    E M  S + LP+   +  +I  L
Sbjct: 87  YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +L L  + G  PN ITYS L+ G  K G   +   L  EM  +   P +
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +L++ LC+  +L+EA +  ++M      P V  Y SL+ +        +A  L + 
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 364 MVSEGLKPST 373
           M   G  P  
Sbjct: 267 MSERGCPPDV 276



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 154/327 (47%), Gaps = 7/327 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++ + + + G   +++++N+L+ +  +S + D  +R+ Q M E    P+    
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI------LRIIQEERIEEGMVL 115
            T+I+ LC+  +L     +L ++   RC P VI  +++I       R+  + ++E    +
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ M +     +   Y++++    + R  + AL +   M+      +   ++  IG+ C+
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              ++ A  +   M     KP    +  LI+G +K   +++++   E +M     P  + 
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVAT 458

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC  G  ++A  M+   + K   P+  +Y  LI G  +   ++E  +L+  +E
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVE 518

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEA 322
            K  +  +  Y  L++ LC+  +L +A
Sbjct: 519 AKGFAMEVGVYNVLVNELCKKKRLSDA 545



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 1/147 (0%)

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           + +P+   +  +I  LC+ G   QA  +L    D+G  P    ++ +I G  K G   + 
Sbjct: 25  RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDA 84

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS-LVPGVDIYESLVG 346
           L  +  +     +P +  +  L+ +L + G++EEA + F+ M + S  +P V  Y +++ 
Sbjct: 85  LGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVIN 144

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
              + G   +A+ L + M   G  P+ 
Sbjct: 145 GLCKDGKLDRAIELLDLMNETGCCPNV 171


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 187/370 (50%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ +   L +RG   S++SFN+++  + K  + D    +++ M ++   PN +T   
Sbjct: 335 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYNI 393

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC GG+++    +LD +      P ++    ++ R+ +  ++EE   + +   ++ 
Sbjct: 394 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 453

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y  ++    K   ++ A  ++E+ML  G +AN  VYT+ I  +  +G+ E+ +
Sbjct: 454 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 513

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +E+   G KP     N  ++   KA  +E+     E + S   LP   +++ +I  L
Sbjct: 514 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A++ + +      +GF+ +   Y+ ++ G+ K G++ +  ++  EM+ K + PT+
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +++  L +  +L+EA   F+  KS  +   V +Y SL+    + G   +A  + EE
Sbjct: 634 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 693

Query: 364 MVSEGLKPST 373
           M+ +GL P+ 
Sbjct: 694 MMKKGLTPNV 703



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 163/348 (46%), Gaps = 1/348 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++ +N  I    K+   D+ W+ +  +      P++ +  ++I  LCK G+L    ++ 
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 307

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  +R  P      ++I+      R E+   LL+R+  +  I   ++++ I+    K 
Sbjct: 308 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 367

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           R ++ AL ++E M K+    NS  Y   I   C  G++EEA  ++ EME+A L P   T 
Sbjct: 368 RKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTV 426

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++   KA+++EE+    E    R   P C  +  +I  L + G   +A  +    LD
Sbjct: 427 NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 486

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G + N + Y+ LI  +   G  ++  K++ E+  +   P L    + +  + + G++E+
Sbjct: 487 AGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 546

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
               F+ ++S+  +P V  Y  L+    + G   +  ++   M  +G 
Sbjct: 547 GRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 594



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 175/373 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A+ +     QRG +   +++ +LI  + K  + D  +R+++ ML+     N    
Sbjct: 437 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 496

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LI      G+ +    +   +  + C P + +  + +  + +   +E+G ++ + +  
Sbjct: 497 TSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 556

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              + D  +YS++++   K         ++  M ++GF+ ++  Y   +  +C+ GK+ +
Sbjct: 557 YGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHK 616

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +++EM+   ++P   T+  +++G AK  R++E+    E+  S+ +  +   ++ +I 
Sbjct: 617 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 676

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              + G   +A  +L   + KG +PN  T++ L+    K  EI E L  +  M+     P
Sbjct: 677 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 736

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y+ LI+ LC+  K  +A  +++ M+   LVP V  Y +++    + GN   A  L 
Sbjct: 737 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 796

Query: 362 EEMVSEGLKPSTS 374
           E   + G  P  +
Sbjct: 797 ERFKANGGIPDAA 809



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 147/315 (46%), Gaps = 5/315 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P  +    LI AL +  + +  +++L ++        V + T+L+  + +E ++ + + L
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 236

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  +    +  D + Y++ +    K  N++ A   + E+  +G   +   YT+ I   C+
Sbjct: 237 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCK 296

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++ EA  L  +ME     P    +N +I G   A R E++    E++  R  +PS  +
Sbjct: 297 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 356

Query: 236 FNEMIRRLCECGNAKQANGMLTL--ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           FN ++  L   G  ++ +  L+L   + K   PN  TY+ +I      G ++E  ++  E
Sbjct: 357 FNSILTCL---GKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDE 413

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           ME+ S+ P L     ++  LC+  KLEEA K F+        P    Y SL+    +KG 
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 473

Query: 354 KAKALHLCEEMVSEG 368
             +A  L E+M+  G
Sbjct: 474 VDEAYRLFEKMLDAG 488



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 142/305 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   + S++ LIH +TK+ +      I+  M +     +      ++   CK G++   
Sbjct: 558 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 617

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++L+ +  K   P V    +++  + + +R++E  +L +    K +  + + YS ++  
Sbjct: 618 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDG 677

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A ++ EEM+K+G + N + + + + A  +  +I EA    Q M+     P 
Sbjct: 678 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 737

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI G  + ++  ++  + + M  + L+P+   +  MI  L + GN   A  +  
Sbjct: 738 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 797

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  P+  +++ LI G +      E  +++ E   +     + +  SL+ +L +  
Sbjct: 798 RFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSE 857

Query: 318 KLEEA 322
            LE+A
Sbjct: 858 CLEQA 862



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/366 (21%), Positives = 162/366 (44%), Gaps = 5/366 (1%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  +  ++  LI  + ++ R +    + + M E           TL+ AL + GQ+   +
Sbjct: 175 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 234

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
            ++D + G    P +++    I    +   ++        +  + +  D ++Y+ +++  
Sbjct: 235 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVL 294

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K   L  A  ++ +M        ++ Y T I  Y   G+ E+A  L++ +   G  P  
Sbjct: 295 CKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSV 354

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN ++    K ++++E+LS  E +M +   P+ S +N +I  LC  G  ++A  +L  
Sbjct: 355 VSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDE 413

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
                  PN +T + ++    K  +++E  K++     +  +P    Y SLI  L + G+
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 473

Query: 319 LEEADKYFKIM--KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++EA + F+ M    H+  P V  Y SL+      G K     + +E++  G KP  + L
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVV--YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 531

Query: 377 CSASTC 382
            +   C
Sbjct: 532 NTYMDC 537



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 113/239 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++Q+GF+L   ++N ++    KS +    + I + M E    P  AT   ++  L K  +
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 648

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     + +    K     V++ +SLI    +  RI+E  ++L+ M++K +  +   ++ 
Sbjct: 649 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 708

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A VK   +  ALV ++ M +     N++ Y+  I   C   K  +A    Q+M+  G
Sbjct: 709 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 768

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           L P   T+  +I G AK   I ++ S  E+  +   +P  ++FN +I  +     A +A
Sbjct: 769 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 827



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/270 (21%), Positives = 130/270 (48%), Gaps = 1/270 (0%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           +++  R+++ ++ +  M R        AY++++ A  + R  E AL +  +M + G+   
Sbjct: 154 LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 213

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
             ++TT + A    G++ +A  L+ E++ + L+P    +N+ I+   KA  ++ +  +  
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           ++ ++ L P   ++  MI  LC+ G   +A  +      +   P    Y+ +I GY   G
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
             ++  KL   +  +   P++ ++ S+++ L +  K++EA   F++MK  +  P    Y 
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYN 392

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++ +    G   +A  + +EM    L P+
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPN 422



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 142/327 (43%), Gaps = 10/327 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN+A    L +AL +  +L   V  +  +   +  P     T LI  + +  R E  + L
Sbjct: 143 PNQACAH-LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 201

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L++M           ++ +V A  +   +  AL + +E+       +  +Y   I  + +
Sbjct: 202 LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 261

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G ++ A     E++  GLKP D ++  +I    KA R+ E+     QM + + +P   A
Sbjct: 262 AGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 321

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N MI      G  + A  +L    ++G  P+ ++++ ++    K+ ++ E L L+ E+ 
Sbjct: 322 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVM 380

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K   P    Y  +I  LC  G++EEA +    M+  SL P +      V I +++  KA
Sbjct: 381 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL----LTVNIMVDRLCKA 436

Query: 356 KALH----LCEEMVSEGLKPSTSYLCS 378
           + L     + E     G  P     CS
Sbjct: 437 RKLEEAYKIFESASQRGCNPDCVTYCS 463



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 117/295 (39%), Gaps = 1/295 (0%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           SP   V  S +LR I+   +     LL      +  H   A +          +L +   
Sbjct: 72  SPTADVVIS-VLRSIRNPSLAAPFFLLASSSSASAPHPLPADAYHAVLPFLHHDLAALEK 130

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V EEM   G+   +        A     ++++A   +  M     +P    + +LI   A
Sbjct: 131 VLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALA 190

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +A+R E +L    QM           F  ++R L   G    A  ++         P+ +
Sbjct: 191 EARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIV 250

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+  I  + K G +    K ++E++ + + P   +YTS+I  LC+ G+L EA++ F  M
Sbjct: 251 LYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM 310

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
           ++   VP    Y +++  +   G    A  L E +   G  PS     S  TC G
Sbjct: 311 EAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLG 365



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 101/221 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   ++++    ++ ++  ++  + K DR D  + +++         N     +LI 
Sbjct: 617 AYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLID 676

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +L+ +  K  +P V    SL+  +++ E I E +V  + M       
Sbjct: 677 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPP 736

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T  YS+++    +++    A V +++M K+G   N   YTT I    + G I +A  L 
Sbjct: 737 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 796

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           +  +  G  P   +FN LIEG + A R  E+    E+   R
Sbjct: 797 ERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLR 837


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 171/352 (48%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+  FN L+  + K  + DLV  + + M       N  T   LI+  C+  Q+   + +L
Sbjct: 9   SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++  +SL+      +RI + + L+ +M+      DTI ++ +++     
Sbjct: 69  GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + + M++RG   N   Y   +   C+ G I+ A  L+ +ME A ++     F
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+   K + ++++L+  ++M ++ + P+   ++ +I  LC  G    A+ +L+  ++
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +PN +T++ LI  + KEG+  E  KL+ +M  +SI P +  Y SLI+  C   +L++
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A + F+ M S    P +D Y +L+    +         L  EM   GL   T
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 175/372 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ F++   +   +++ G S +L ++N LI+   +  +  L   +   M++    P+  T
Sbjct: 23  MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 82

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  I  T+LI  +    +  E + L+ RM+
Sbjct: 83  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 142

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    + + Y ++V    K  +++ A  +  +M      A+  ++ T I + C+Y  ++
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L +EME  G++P   T++ LI       R  ++      M+ +K+ P+   FN +I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TY+ LI G+     + +  +++  M  K   
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P L  Y +LI   C+  ++E+  + F+ M    LV     Y +L+      G+   A  +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P 
Sbjct: 383 FKQMVSDGVPPD 394



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 161/353 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+++ ++L++      R      +   M+E    P+  T  TLI  L    +    
Sbjct: 75  GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V ++DR+  + C P ++    ++  + +   I+    LL +M    +  D + ++ I+ +
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R+++ AL +++EM  +G   N   Y++ I   C YG+  +A+ L+ +M    + P 
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TFN LI+   K  +  E+    + M+ R + P    +N +I   C      +A  M  
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + K   P+  TY+ LI G+ K   +++  +L+ EM ++ +      YT+LI  L   G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             + A K FK M S  + P +  Y  L+      G   KAL + + M    +K
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 170/386 (44%), Gaps = 35/386 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG   +L+++  +++ + K    DL + +   M       +     T+I +LCK   + 
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  K   P V+  +SLI  +    R  +   LL  M+ K +  + + ++ ++
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A VK      A  ++++M+KR    + F Y + I  +C + ++++A  + + M +    
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  +T+N LI+G  K+KR+E+      +M  R L+     +  +I+ L   G+   A  +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
               +  G  P+ +TYS L+ G    G++++ L+++  M+                    
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442

Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
                           K + P +  Y ++IS LC    L+EA    K MK    +P    
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVS 366
           Y +L+  HL  G+KA +  L  EM S
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRS 528



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 161/358 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G+    I+F TLIH +   ++      +   M++    PN  T   +++ LCK G + 
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              ++L+++   +    V++  ++I  + +   +++ + L K M  K +  + + YS ++
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                      A  +  +M+++  + N   +   I A+ + GK  EA  L  +M    + 
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G     R++++    E M+S+   P    +N +I+  C+    +    +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G   + +TY+ LI G   +G+     K++ +M    + P +  Y+ L+  LC 
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE+A + F  M+   +   + IY +++    + G       L   +  +G+KP+ 
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 119/254 (46%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M++   +     ++ ++ A  KM+  +  + + E+M + G S N + Y   I  +C   +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           I  A  L+ +M   G +P   T + L+ G    KRI ++++  +QM+     P    F  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  L     A +A  ++   + +G  PN +TY  ++ G  K G+I     L  +ME   
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I   +  + ++I SLC+   +++A   FK M++  + P V  Y SL+      G  + A 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 359 HLCEEMVSEGLKPS 372
            L  +M+ + + P+
Sbjct: 241 QLLSDMIEKKINPN 254



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 133/285 (46%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P +     L+  I + ++ +  + L ++M R  + H+   Y++++    +   +  A
Sbjct: 5   RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L +  +M+K G+  +    ++ +  YC   +I +A  L+ +M   G +P   TF  LI G
Sbjct: 65  LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                +  E+++  ++M+ R   P+   +  ++  LC+ G+   A  +L          +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            + ++ +I    K   + + L L+ EME K I P +  Y+SLIS LC  G+  +A +   
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M    + P +  + +L+   +++G   +A  L ++M+   + P 
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 177/360 (49%), Gaps = 8/360 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDM 80
            +I+FN L+  + KS R +  ++I++ M  + +  PN  T  T+I+ LCK G+L   +++
Sbjct: 99  DIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL 158

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           LD ++   C P VI  + L+  + +  R ++G  LL+ M R+    D I Y+ ++    K
Sbjct: 159 LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            R L+ AL + + M++ G       Y + +  +C   +++ A  L+Q M   G  P    
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA------KQANG 254
           +N +I G  +  R++++ +  +QM++ + +P    ++ +I  LC+          + A  
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L +    G  PN  TY+ +I G  +  + Q+ L L   M    + P L +++ +I SLC
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +   L+ A K F +M      P    Y +L+    + G   KA+ + E MV E  +P  +
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVA 457



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 164/339 (48%), Gaps = 30/339 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F + + + +RGF   +I +NTL++ + KS R D    + Q M+ +  YP   T  +L+ 
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+  Q+     ++  +  + C P VI   ++I  + ++ R+++   LLK+M+    + 
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS I+    K   +++                               K+E A  ++
Sbjct: 310 DVITYSTIIDGLCKDWRVDADW-----------------------------KLEAACEIL 340

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M+  G  P   T+ ++IEG  +A++ +++L+   +M+  +++P  S+F+ +I  LC+ 
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +   A  +  +  ++   PN + Y+ LI G +K GE+ + +++ +E+  +S  P +  Y
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRV-FELMVESFRPGVATY 459

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            S++  LC  G++EEA +  + M      P    Y +L+
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 1/291 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PNE T  +LI  LCK G+L    ++LD +  +   P V V+  +I  + +  R  + +  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS-ANSFVYTTFIGAYC 174
            K +       D I ++++V A VK   +E A  ++E M        N   YTT I   C
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + GK++ A  L+  M   G  P   T+++L+EG  KA R ++  +  ++M  R   P   
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N ++  LC+     +A  ++ L +  G  P  +TY+ L+  + +  ++    +L   M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +   P +  Y ++I+ LC+  +L++A    K M +   VP V  Y +++
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/357 (21%), Positives = 159/357 (44%), Gaps = 7/357 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++ +LIH + K+ + D  + +   M +    P  A    +I  LCK G+    +     +
Sbjct: 32  TYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKNMIHDTIAYSLIVYAKVKMRN 143
            G +C+P +I    L+  +++  R+EE   + + M      + + + Y+ ++    K   
Sbjct: 92  AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGK 151

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ + + M + G   N   Y+  +   C+ G+ ++   L+QEM   G +P    +N 
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+ G  K++R++E+L   + M+     P+   +N ++   C      +A  ++ +  ++G
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ------CG 317
             P+ I Y+ +I G  ++  + +   L  +M      P +  Y+++I  LC+        
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADW 331

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           KLE A +  ++MK     P    Y  ++          +AL L   M+   + P  S
Sbjct: 332 KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 166/359 (46%), Gaps = 7/359 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ T+I+ + K  + D    +   M E    PN  T   L+  LCK G+      +L
Sbjct: 135 NVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLL 194

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +   P VI+  +L+  + +  R++E + L++ M+R       + Y+ ++    + 
Sbjct: 195 QEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRS 254

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           + ++ A  + + M +RG   +   Y T I   C   ++++A  L+++M  A   P   T+
Sbjct: 255 KQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITY 314

Query: 202 NLLIEGCAKAKRI------EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           + +I+G  K  R+      E +    E M      P+   +  +I  LC    ++QA  +
Sbjct: 315 STIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALAL 374

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   +D    P+  ++S +IG   K  ++    K++  M  +   P   AY +LI  L +
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            G++++A + F++M   S  PGV  Y S++      G   +A+ + E M+ +   P  +
Sbjct: 435 GGEVDKAVRVFELM-VESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGA 492



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 1/250 (0%)

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + +   Y  +++   K   L+ A  + +EM  RG      V+   I   C+ G+  +A  
Sbjct: 27  VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG 86

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRL 243
             + +      P   TFN+L++   K+ R+EE+    E M  S + LP+   +  +I  L
Sbjct: 87  YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +L L  + G  PN ITYS L+ G  K G   +   L  EM  +   P +
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +L++ LC+  +L+EA +  ++M      P V  Y SL+ +        +A  L + 
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266

Query: 364 MVSEGLKPST 373
           M   G  P  
Sbjct: 267 MSERGCPPDV 276



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 154/327 (47%), Gaps = 7/327 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++ + + + G   +++++N+L+ +  +S + D  +R+ Q M E    P+    
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI------LRIIQEERIEEGMVL 115
            T+I+ LC+  +L     +L ++   RC P VI  +++I       R+  + ++E    +
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ M +     +   Y++++    + R  + AL +   M+      +   ++  IG+ C+
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              ++ A  +   M     KP    +  LI+G +K   +++++   E +M     P  + 
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVAT 458

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC  G  ++A  M+   + K   P+  +Y  LI G  +   ++E  +L+  +E
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVE 518

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEA 322
            K  +  +  Y  L++ LC+  +L +A
Sbjct: 519 AKGFAMEVGVYNVLVNELCKKKRLSDA 545



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 1/147 (0%)

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           + +P+   +  +I  LC+ G   QA  +L    D+G  P    ++ +I G  K G   + 
Sbjct: 25  RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDA 84

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS-LVPGVDIYESLVG 346
           L  +  +     +P +  +  L+ +L + G++EEA + F+ M + S  +P V  Y +++ 
Sbjct: 85  LGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVIN 144

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
              + G   +A+ L + M   G  P+ 
Sbjct: 145 GLCKDGKLDRAIELLDLMNETGCCPNV 171


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 173/367 (47%), Gaps = 3/367 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           + +   A DV + + + GF+ ++++FN+L+    K    D   ++   M+     PN  T
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  LCK  +     ++L+ +     +P     ++LI  + + ++IEE   +L+RM 
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 D + YS I++A  K   L  A    +EM K+  S +   Y T I   C+ GKI 
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284

Query: 181 EANCLMQEMENAG-LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           EA  ++ +M+ +G + P   T++ +I G  K+  + E+    ++M      P    +  +
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+CG  ++A  +L      G +PN +TY+ LI G  K  ++ E  ++  EM     
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 404

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKS--HSLVPGVDIYESLVGIHLEKGNKAKA 357
            P L  Y ++++ LC  G+++EA +  + MK       P    Y ++V   +      +A
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464

Query: 358 LHLCEEM 364
             L E+M
Sbjct: 465 EQLLEQM 471



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 171/362 (47%), Gaps = 1/362 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   + +RG   +L+++N L+  + K         + + M+E    PN  T  +
Sbjct: 73  LEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNS 132

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G +     +L  +  K   P V+  ++LI  + + ++  E   +L+ M    
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS +++   K   +E A  +   M   G + +  VY++ I A+C+ GK+ EA 
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 252

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFNEMIRR 242
             +QEM      P   T+N +I+G  K  +I E+    +QM  S  +LP    ++ +I  
Sbjct: 253 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVING 312

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A  +L      G +P+ +TY+ +I G  K G ++E   L   M+    +P 
Sbjct: 313 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 372

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT+LIS LC+  K++EA++  + M++    P +  Y ++V      G   +A  L +
Sbjct: 373 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 432

Query: 363 EM 364
            M
Sbjct: 433 RM 434



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 1/361 (0%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           +L   G   +++++  LI    ++ + +   ++ + M E    PN  T   L+ ALCK  
Sbjct: 47  HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLS 106

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            +    D++ ++     +P V+   SL+    +   +++   LL  M+ K M  + + YS
Sbjct: 107 MVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYS 166

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K +    A  V EEM   G + ++F Y+  I   C+  KIEEA  +++ M  +
Sbjct: 167 ALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 226

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P    ++ +I    K+ ++ E+    ++M  ++  P    +N +I  LC+ G   +A
Sbjct: 227 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 286

Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             +L    + G   P+ +TYS +I G  K   + E  KL   M     +P +  YT++I 
Sbjct: 287 QVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 346

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+CG+LEEA+   + MK     P V  Y +L+    +     +A  + EEM + G  P
Sbjct: 347 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 406

Query: 372 S 372
           +
Sbjct: 407 N 407



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   +I+A+   G L   +D L R  G  C P V+  T+LI    + +++EE M L
Sbjct: 23  PDAFTHTPIITAMANAGDLDGAMDHL-RSMG--CDPNVVTYTALIAAFARAKKLEEAMKL 79

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ M  +    + + Y+++V A  K+  + +A  V ++M++ GF+ N   + + +  +C+
Sbjct: 80  LEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCK 139

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G +++A  L+  M   G++P   T++ LI+G  K+++  E+    E+M +  + P    
Sbjct: 140 RGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFT 199

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++ +I  LC+    ++A  ML      G +P+ + YS +I  + K G++ E  K   EM 
Sbjct: 200 YSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMR 259

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK-SHSLVPGVDIYESLVGIHLEKGNK 354
            +  SP +  Y ++I  LC+ GK+ EA      M+ S  ++P V  Y +++    +    
Sbjct: 260 KQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDML 319

Query: 355 AKALHLCEEMVSEGLKPS 372
            +A  L + M   G  P 
Sbjct: 320 VEAQKLLDRMCKAGCNPD 337



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 3/230 (1%)

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           +L +AL + EEM   GF+ ++F +T  I A    G ++ A   M  + + G  P   T+ 
Sbjct: 5   DLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYT 61

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            LI   A+AK++EE++   E+M  R   P+   +N ++  LC+      A  ++   ++ 
Sbjct: 62  ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 121

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           GF+PN +T++ L+ G+ K G + +  KL   M  K + P +  Y++LI  LC+  K  EA
Sbjct: 122 GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEA 181

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  + MK+  + P    Y +L+    +     +A  +   M   G  P 
Sbjct: 182 KEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 178/369 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E R     ++ ++T+I  + K    D  + +Y  M     +P+  T  TLI 
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLIC 193

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  GQL     +L+ +  K  +P +    +LI  + +E +++E   LL  M +K +  
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP 253

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS+++     +  ++ A  ++  M++ G + + + Y   I   C+  +++EA  L+
Sbjct: 254 DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM +  + P   T++ LI+G  K  RI   L   ++M  R    +   +N ++  LC+ 
Sbjct: 314 REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKN 373

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N  +A  +     ++G  PN+ TY+ LI G  K G +++   L+  +  K     +  Y
Sbjct: 374 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTY 433

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +IS LC+ G  +EA      M+ +  +P    +E ++   LEK    KA  L  EM++
Sbjct: 434 TVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIA 493

Query: 367 EGLKPSTSY 375
           +GL P  ++
Sbjct: 494 KGLLPFRNF 502



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 165/362 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           +F V   + + G+  + I  NTL+  +            +  ++      ++ +   L++
Sbjct: 64  SFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLN 123

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+ +  + +L  I  +   P V++ +++I  + +++ ++E   L   M  + +  
Sbjct: 124 GLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFP 183

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I Y+ ++        L  A  +  EM+ +  + N + Y T I   C+ GK++E+  L+
Sbjct: 184 DVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLL 243

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G+KP    +++L++G      ++++      M+   + P   ++N +I  LC+ 
Sbjct: 244 AVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKG 303

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +L   L K   P+ +TYS LI G  K G I  +L L  EM ++     L  Y
Sbjct: 304 KRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTY 363

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SL+  LC+   L++A   F  MK   + P    Y +L+    + G   K   L + ++ 
Sbjct: 364 NSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLV 423

Query: 367 EG 368
           +G
Sbjct: 424 KG 425



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 160/346 (46%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           +I F  ++  + K      V  + + M      P+  T+  LI+  C  GQ+     +L 
Sbjct: 10  IIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLG 69

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           +I      P  I+  +L+  +  +  +++ +    +++ +    D ++Y +++    K+ 
Sbjct: 70  KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIG 129

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
               A+ +   +  R    +  +Y+T I   C+   ++EA  L  EM   G+ P   T+ 
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYT 189

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            LI G   A ++ E+     +M+ + + P+   +N +I  LC+ G  K++  +L +   K
Sbjct: 190 TLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P+ + YS L+ GY   GE+Q+  +++  M    ++P + +Y  +I+ LC+  +++EA
Sbjct: 250 GVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEA 309

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
               + M   +++P    Y SL+    + G     L L +EM   G
Sbjct: 310 MNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG 355



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 147/311 (47%), Gaps = 2/311 (0%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++ +L K     T + +  ++  K   P ++  + LI       ++     +L ++L+  
Sbjct: 16  ILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 75

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +TI  + ++        ++ +L  +++++ +GF  +   Y   +   C+ G+   A 
Sbjct: 76  YQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAI 135

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ +E+   +P    ++ +I+G  K K ++E+     +M +R + P    +  +I   
Sbjct: 136 KLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGF 195

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A G+L   + K  +PN  TY+ LI    KEG+++E   L   M  K + P +
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDV 255

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA-KALHLCE 362
             Y+ L+   C  G++++A + F +M    + P V  Y  ++   L KG +  +A++L  
Sbjct: 256 VIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIIN-GLCKGKRVDEAMNLLR 314

Query: 363 EMVSEGLKPST 373
           EM+ + + P T
Sbjct: 315 EMLHKNMIPDT 325



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 2/272 (0%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           L K+M  K ++ D +  S+++     +  +  +  V  ++LK G+  N+ +  T +   C
Sbjct: 32  LSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLC 91

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G+++++     ++   G +    ++ +L+ G  K      ++     +  R   P   
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV 151

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            ++ +I  LC+     +A  + +    +G  P+ ITY+ LI G+   G++ E   L  EM
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             K+I+P +  Y +LI +LC+ GK++E+     +M    + P V IY  L+  +   G  
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEV 271

Query: 355 AKALHLCEEMVSEGLKPST-SY-LCSASTCRG 384
            KA  +   MV  G+ P   SY +     C+G
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKG 303



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 121/255 (47%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           ML    I   I +  I+ + VKM++  + + + ++M  +G   +    +  I  +C  G+
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +  +  ++ ++   G +P     N L++G      +++SL + ++++++       ++  
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++  LC+ G  + A  +L    D+   P+ + YS +I G  K+  + E   LY EM  + 
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I P +  YT+LI   C  G+L EA      M   ++ P +  Y +L+    ++G   ++ 
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240

Query: 359 HLCEEMVSEGLKPST 373
           +L   M  +G+KP  
Sbjct: 241 NLLAVMTKKGVKPDV 255


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 169/361 (46%), Gaps = 4/361 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G S +  + N LI+   +  R DL + +    ++    P   T  TLI+ L K G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLI--LRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
               V++ D +  + C P     T++I  L  I E  +  G  L K+M       + + Y
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAG--LFKKMEEAGCQLNVVTY 118

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S ++++  K R +  AL ++  M  +  S   F YT+ I   C + + +EA+ L+ EM +
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   TFN+L++   K  ++  +    + M    + P    +N ++          +
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +  + + KG  P+  +YS LI GY K   I E  +L+ EM ++  +P   +Y +LI 
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LCQ G+L EA   FK M ++  +P +  Y  L+    ++G   KA  L   M S  LKP
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 372 S 372
           +
Sbjct: 359 N 359



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 176/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A ++   +  RG      ++ T+I+ + K     L   +++ M E     N  T  T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +LCK  ++   +D+   +  K  SP +   TSLI  +    R +E   LL  M   N
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + + ++++V    K   + +A  V + M + G   +   Y + +  Y  + ++ EA 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M   G KP   ++++LI G  KAKRI+E+     +M+ +   P+  ++N +I  L
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  +       G  PN  TY+ L+ G+ K+G + +  +L+  M+   + P L
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  L++++C+ G L++A + F  +    L P V IY +++    ++G   +AL     
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 364 MVSEGLKPS 372
           M  +G  P 
Sbjct: 421 MEDDGCPPD 429



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 172/364 (47%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  + + +E+ G  L++++++TLIH + K  R +    I+ +M      P   T  +LI
Sbjct: 98  LAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLI 157

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LC   + +    +L+ +      P V+    L+    +E ++     +LK M    + 
Sbjct: 158 QGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE 217

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ ++Y       +  A  +++ M+ +G   + F Y+  I  YC+  +I+EA  L
Sbjct: 218 PDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQL 277

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             EM + G  P + ++N LI G  +  R+ E+    + M +   LP+   +  ++   C+
Sbjct: 278 FNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCK 337

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G   +A  +          PN + Y+ L+    K G +++  +L+ E+    + P +  
Sbjct: 338 QGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI 397

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT++I+ LC+ G L+EA + F+ M+     P    Y  ++   L+  ++++A+HL  EM 
Sbjct: 398 YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457

Query: 366 SEGL 369
             G 
Sbjct: 458 DRGF 461


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 154/313 (49%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           ++  LI+  C   ++   + +L +I      P ++  T+L+  +  E ++++ M+L   M
Sbjct: 99  SLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM 158

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  +   Y++I+ +  K      AL   ++M K G   N   Y+T I  YC  G++
Sbjct: 159 LVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQM 218

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA  +   M + G  P   T+  L+ G  K +RIEE++   ++ + + L+P    F  +
Sbjct: 219 DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI 278

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC  G    A  +       G +PN +TY  L+ G  K G ++E   L+ EM+  ++
Sbjct: 279 ISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTV 338

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P L  YT LI SLC+CGK+++  + F  +    L P V  Y +LVG   ++G   +A  
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398

Query: 360 LCEEMVSEGLKPS 372
           L  +M  +G  P 
Sbjct: 399 LFRKMEEDGCTPD 411



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 141/298 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   S+++F TL++ +    + D V  +Y  ML     PN  T   +I++L K G+    
Sbjct: 127 GLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEA 186

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +  L ++    C P V+  ++LI       +++E   +   M+ K    +   Y+ ++  
Sbjct: 187 LGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNG 246

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  +E A+ + +E L++G   +   +TT I   C  G+   A  L + +   G  P 
Sbjct: 247 YCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPN 306

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ +L++G  K   +EE+ +  ++M    + P+   +  +I  LC+CG  K    + +
Sbjct: 307 IMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFS 366

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             +D+G  PN  TY+ L+G   KEG I E  KL+ +ME    +P   AY  +I    Q
Sbjct: 367 RLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQ 424



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 170/374 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  +E    + + +E  G    + S + LI+      R D    +   +L+    P+  T
Sbjct: 75  MGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVT 134

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++ LC  G++   + + D +  +   P V     +I  + +  +  E +  LK+M 
Sbjct: 135 FTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQME 194

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +   + + + YS ++        ++ A  V++ M+ +G + N + YT+ +  YC+  +IE
Sbjct: 195 KVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIE 254

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L+ E    GL P   TF  +I G  +A R   +      + +    P+   +  ++
Sbjct: 255 EAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLL 314

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ GN ++A  +          PN + Y+ LI    K G+I++  +L+  +  + + 
Sbjct: 315 DGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLK 374

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  YT+L+ +LC+ G + EA K F+ M+     P    Y  ++   L+  + + A  L
Sbjct: 375 PNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQL 434

Query: 361 CEEMVSEGLKPSTS 374
            EEMV+ G     +
Sbjct: 435 VEEMVNRGFSADAA 448



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 139/282 (49%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P ++  + L   I++    E  + L K +    +  D  + S+++     +  ++  L V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             ++LK G   +   +TT +   C  GK+++   L  +M   GL+P   T+N++I   +K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           + +  E+L + +QM     +P+   ++ +I   C  G   +A  +  L + KG +PN  T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ L+ GY K   I+E ++L  E   K + P +  +T++IS LC+ G+   A + F+ + 
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +H   P +  Y  L+    + GN  +A  L +EM    +KP+
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 35/293 (11%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG   ++ ++N +I+ ++KS + +      + M +    PN     TLI   C  GQ+  
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV- 135
              + D +  K C+P V   TSL+    + ERIEE + LL   LRK ++ D + ++ I+ 
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280

Query: 136 -----------------------------YAKV-----KMRNLESALVVYEEMLKRGFSA 161
                                        Y  +     K  NLE A  +++EM +     
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP 340

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           N  +YT  I + C+ GKI++   L   + + GLKP   T+  L+    K   I E+    
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLF 400

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
            +M      P   A+N +I+   +  +   A  ++   +++GFS +  T + L
Sbjct: 401 RKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 178/391 (45%), Gaps = 32/391 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L   GF    +S+ T++  +  + R + V  ++  M+E    PNE T   L+   C+GG 
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +L+++ G  C+    +   +I  I ++ R+++    L  M       DTI+Y+ 
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +    E A  + +EM+++    N   + TFI   C+ G IE+A  L+++M   G
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451

Query: 194 L--------------------------------KPYDETFNLLIEGCAKAKRIEESLSYC 221
                                            KP   T+  L+ G   A+R++ +    
Sbjct: 452 CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELL 511

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            +M+ +   P+   FN ++   C+ G   +A  ++   ++ G +PN ITY+ L+ G  K+
Sbjct: 512 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 571

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
              +E L+L + +    +SP +  Y+S+I  L +  ++EEA K F I++   + P   IY
Sbjct: 572 CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIY 631

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++    ++ N   A+     MVS G  P+
Sbjct: 632 NKILLALCKRCNTDGAIDFFAYMVSNGCMPN 662



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 170/357 (47%), Gaps = 3/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   S++++  L+  V KS        +   M      PN  T   +I+ +C+ G++ 
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              + L+R+      P  +  T+++  +   +R E+   L   M+ KN + + + + ++V
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +E A+ V E+M   G +AN+ +    I   C+ G++++A   +  M + G  
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++  +++G  +A+R E++    ++M+ +   P+   FN  I  LC+ G  +QA  +
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 443

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    + G   N +TY+ L+ G+  +G +   L+L+Y M  K   P    YT+L++ LC 
Sbjct: 444 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCN 500

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +L+ A +    M      P V  +  LV    +KG   +A+ L E+M+  G  P+
Sbjct: 501 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 6/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R  E+ G ++ + ++NTL+    +  + D   R+   M      P+  T   +I 
Sbjct: 128 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIR 184

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G++   + +LD +  + C P V+  T L+  + +     + M +L  M  K    
Sbjct: 185 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP 244

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++I+    +   ++ A      +   GF  ++  YTT +   C   + E+   L 
Sbjct: 245 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 304

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM      P + TF++L+    +   +E ++   EQM       + +  N +I  +C+ 
Sbjct: 305 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 364

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A   L      G SP+ I+Y+ ++ G  +    ++  +L  EM  K+  P    +
Sbjct: 365 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 424

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            + I  LCQ G +E+A    + M  H     +  Y +LV     +G    AL L     S
Sbjct: 425 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL---FYS 481

Query: 367 EGLKPST 373
              KP+T
Sbjct: 482 MPCKPNT 488



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 4/223 (1%)

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           + G + + F Y T +  YC YG+++ A  L+  M  A   P   T+  +I G     R+ 
Sbjct: 137 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVG 193

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           E+LS  + M+ R   PS   +  ++  +C+     QA  +L     KG +PN +TY+ +I
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 253

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  +EG + +  +    +      P   +YT+++  LC   + E+ ++ F  M   + +
Sbjct: 254 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 313

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           P    ++ LV      G   +A+ + E+M   G   +T+ LC+
Sbjct: 314 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT-LCN 355



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 139/320 (43%), Gaps = 32/320 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     +   G S   IS+ T++  + +++R +    + + M+     PNE T  T I 
Sbjct: 370 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 429

Query: 67  ALCKGGQLQTYVDMLDRI--HG------------------------------KRCSPMVI 94
            LC+ G ++    +++++  HG                                C P  I
Sbjct: 430 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 489

Query: 95  VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM 154
             T+L+  +   ER++    LL  ML+K+   + + ++++V    +   ++ A+ + E+M
Sbjct: 490 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           ++ G + N   Y T +    +    EEA  L+  + + G+ P   T++ +I   ++  R+
Sbjct: 550 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 609

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           EE++     +    + P    +N+++  LC+  N   A       +  G  PNE+TY  L
Sbjct: 610 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 669

Query: 275 IGGYAKEGEIQEVLKLYYEM 294
           I G A E  ++E   L  E+
Sbjct: 670 IEGLANEDFLKETRDLLREL 689



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 97/207 (46%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++ TL+  +  ++R D    +   ML+    PN  T   L+S  C+ G +   ++++++
Sbjct: 489 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 548

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C+P +I   +L+  I ++   EE + LL  ++   +  D + YS I+    +   
Sbjct: 549 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 608

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E A+ ++  +   G    + +Y   + A C+    + A      M + G  P + T+  
Sbjct: 609 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 668

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLL 230
           LIEG A    ++E+     ++ SR +L
Sbjct: 669 LIEGLANEDFLKETRDLLRELCSRGVL 695



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 3/151 (1%)

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++  SR   P      ++IR LC  G    A  +L  A   G + +   Y+ L+ GY + 
Sbjct: 98  DRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRY 157

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G++    +L   M    ++P    YT +I  LC  G++ EA      M      P V  Y
Sbjct: 158 GQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY 214

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L+    +     +A+ + +EM ++G  P+
Sbjct: 215 TVLLEAVCKSTGFGQAMEVLDEMRAKGCTPN 245



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
           + +A  ++  A  +G +P+    + LI    + G   +  ++    E    +  + AY +
Sbjct: 90  SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L++  C+ G+L+ A    +++ S  + P    Y  ++    ++G   +AL L ++M+  G
Sbjct: 150 LVAGYCRYGQLDAAR---RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206

Query: 369 LKPS 372
            +PS
Sbjct: 207 CQPS 210


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 183/369 (49%), Gaps = 1/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ +F++   +++      L +++TLIH +  S   D   R+Y+ M EN   P+     T
Sbjct: 246 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 305

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++   + G+++  +++   +  + C  +V  N  LI  + +  +++E + + + +  K+
Sbjct: 306 MLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNI-LIRGLFENAKVDEAISIWELLPEKD 364

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D++ Y ++V+   K   L  AL + EE        ++F Y++ I   C  G+++E  
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 424

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ +M   G KP     N +I G  +A ++E++L +   M+S+   P+   +N +I  L
Sbjct: 425 GVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 484

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +     +A  ++   L KG+ PN ITYS L+ G  +  ++   L L+ +   K   P +
Sbjct: 485 SKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 544

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  +I  LC  GK+E+A + +  MK  + VP +  + +L+    +  +  +A  + + 
Sbjct: 545 KMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDH 604

Query: 364 MVSEGLKPS 372
           ++  GL+P 
Sbjct: 605 ILQYGLQPD 613



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 175/384 (45%), Gaps = 4/384 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A ++  ++  +GFS  + S+ TLI+ + K+       +++  M E    P+ A    
Sbjct: 140 FDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 199

Query: 64  LISALCKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           LI    K G +    ++ +R+  G    P +     +I  + +  + +E   +  RM + 
Sbjct: 200 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 259

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D   YS +++      NL+ A  VY+EM + G S +  VY T +  Y   G+IEE 
Sbjct: 260 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 319

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L + ME  G +    ++N+LI G  +  +++E++S  E +  +        +  ++  
Sbjct: 320 LELWKVMEKEGCRTV-VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 378

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G   +A  +L  A +     +   YS +I G  +EG + EV  +  +M      P 
Sbjct: 379 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 438

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
                ++I+   +  KLE+A ++F  M S    P V  Y +L+    +    ++A  L +
Sbjct: 439 PYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVK 498

Query: 363 EMVSEGLKPS--TSYLCSASTCRG 384
           EM+ +G KP+  T  L     C+G
Sbjct: 499 EMLQKGWKPNMITYSLLMNGLCQG 522



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 2/273 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  L   +++++I+ + +  R D V  +   M ++   PN      +I+   +  +L+ 
Sbjct: 399 RG-DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLED 457

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +     +  K C P V+   +LI  + + ER  E   L+K ML+K    + I YSL++ 
Sbjct: 458 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMN 517

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              + + L+ AL ++ + L++GF  +  ++   I   C  GK+E+A  L  EM+     P
Sbjct: 518 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVP 577

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T N L+EG  K +  E +    + ++   L P   ++N  ++ LC C     A G L
Sbjct: 578 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFL 637

Query: 257 TLALDKGFSPNEITYSHLIGGY-AKEGEIQEVL 288
             A+D+G  P  IT++ L+ GY A +G ++ V 
Sbjct: 638 NDAVDRGVLPTAITWNILVQGYLALKGYMEPVF 670



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 155/345 (44%), Gaps = 1/345 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   ++ + +E+ G   +++S+N LI  + ++ + D    I++ + E     +  T   L
Sbjct: 317 EECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 375

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G L   + +L+     R        +S+I  + +E R++E   +L +M +   
Sbjct: 376 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 435

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +    + ++   V+   LE AL  +  M+ +G       Y T I    +  +  EA  
Sbjct: 436 KPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 495

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++EM   G KP   T++LL+ G  + K+++ +L+   Q + +   P     N +I  LC
Sbjct: 496 LVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 555

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A  + +    +   PN +T++ L+ G+ K  + +   K++  +    + P + 
Sbjct: 556 SSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDII 615

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           +Y   +  LC C ++ +A  +        ++P    +  LV  +L
Sbjct: 616 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYL 660



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 7/288 (2%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRI 103
           ++ H+L+ +  P     + +  A  K       +D+  R+H    C P +    SL+  +
Sbjct: 45  VFHHILKRLFDP-----KLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 99

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           I+  + +E            +  +   Y++++    + +  + A  +   M  +GFS + 
Sbjct: 100 IESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDV 159

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           F Y T I +  + G + +A  L  EM   G+ P    +N+LI+G  K   I  +    E+
Sbjct: 160 FSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWER 219

Query: 224 MM-SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           ++    + P+  ++N MI  LC+CG   ++  +           +  TYS LI G    G
Sbjct: 220 LLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSG 279

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            +    ++Y EM    +SP +  Y ++++   + G++EE  + +K+M+
Sbjct: 280 NLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 48/280 (17%)

Query: 142 RNLESALVVYEEMLK-RGFSANSFVYTTFIG----------AYCEYGKIEEANCLMQEM- 189
           +N  SAL +++ + +  G+S   +V+   +           AY +    ++A  + Q M 
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNSMPDQALDIFQRMH 80

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E  G +P   ++N L+    ++ + +E+ S+     +  L P+   +N +I+  C     
Sbjct: 81  EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 140

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK------------ 297
            +A  +L     +GFSP+  +Y  LI   AK G + + LKL+ EM  +            
Sbjct: 141 DKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 200

Query: 298 ------------------------SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
                                   S+ P +P+Y  +I+ LC+CGK +E+ + +  MK + 
Sbjct: 201 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 260

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
               +  Y +L+      GN   A  + +EM   G+ P  
Sbjct: 261 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDV 300



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/204 (17%), Positives = 87/204 (42%), Gaps = 35/204 (17%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A+ + + + Q+G+  ++I+++ L++ + +  + D+   ++   LE    P+      
Sbjct: 490 FSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 549

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC  G+++  + +   +  + C P ++ + +L+          EG           
Sbjct: 550 IIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLM----------EGF---------- 589

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                           K+R+ E A  +++ +L+ G   +   Y   +   C   +I +A 
Sbjct: 590 ---------------YKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAV 634

Query: 184 CLMQEMENAGLKPYDETFNLLIEG 207
             + +  + G+ P   T+N+L++G
Sbjct: 635 GFLNDAVDRGVLPTAITWNILVQG 658


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 165/346 (47%), Gaps = 12/346 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE++  S  ++++N LI+   K  +      +Y  ML     P+  T  ++I   CK  +
Sbjct: 282 LERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNR 341

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     M   +  K CSP +I   +LI    + +R+++G+ LL  M    ++ +TI Y+ 
Sbjct: 342 LDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 401

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA- 192
           +++   ++ +L +A  + +EM+  G   N     T +   C+ GK+++A  + + M+ + 
Sbjct: 402 LIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 461

Query: 193 ----------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                     G++P  +T+N+LI G     +  E+    E+M  R ++P    +N +I  
Sbjct: 462 MDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHG 521

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I   
Sbjct: 522 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 581

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGI 347
              Y +LI    + G +  A   F+ M +  + P  + I   L G+
Sbjct: 582 AITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 173/369 (46%), Gaps = 18/369 (4%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++F TL++ + +  R      +   MLE+   PN+ T  T++  +CK G   + +++L
Sbjct: 178 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 237

Query: 82  DRIHG-KRCSPMVIV-----NTSLILRIIQEERIEEGMVLLKRML-RKNMIHDTIAYSLI 134
            ++       P V++      T +I       R  E   LL+ ML RK +  D + Y+ +
Sbjct: 238 RKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNAL 297

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           + A VK      A  +Y+EML RG   ++  Y++ I  +C+  +++ A  +   M   G 
Sbjct: 298 INAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 357

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   TFN LI G  +AKR+++ +    +M    L+ +   +  +I   C+ G+   A  
Sbjct: 358 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 417

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-----------YKSISPTL 303
           +L   +  G  PN +T + L+ G    G++++ L+++  M+           +  + P +
Sbjct: 418 LLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDV 477

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LIS L   GK  EA++ ++ M    +VP    Y S++    ++    +A  + + 
Sbjct: 478 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDS 537

Query: 364 MVSEGLKPS 372
           M S+   P+
Sbjct: 538 MGSKSFSPN 546



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 163/371 (43%), Gaps = 11/371 (2%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   +V   + R +E R    +  SF  L+       +       +  + +   +P   T
Sbjct: 91  MGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVT 150

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL+  LC   ++   +D+  ++    C P V+  T+L+  + +E R+ E + LL RML
Sbjct: 151 FSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRML 206

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FSANSFVY-----TTFIGAYC 174
              +  + I Y  IV    KM +  SAL +  +M +      N  ++     T  I  +C
Sbjct: 207 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFC 266

Query: 175 EYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
             G+  EA  L+QEM E   + P   T+N LI    K  +  E+    ++M+ R ++PS 
Sbjct: 267 SSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPST 326

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             ++ MI   C+      A  M  L   KG SP+ IT++ LI GY +   + + +KL +E
Sbjct: 327 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 386

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    +      YT+LI   CQ G L  A    + M S  + P V    +L+    + G 
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446

Query: 354 KAKALHLCEEM 364
              AL + + M
Sbjct: 447 LKDALEMFKAM 457



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 167/357 (46%), Gaps = 12/357 (3%)

Query: 29  LIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
           +I+    S R     ++ Q MLE  +  P+  T   LI+A  K G+     ++ D +  +
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
              P  I  +S+I    ++ R++    +   M  K    D I ++ ++    + + ++  
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           + +  EM + G  AN+  YTT I  +C+ G +  A  L+QEM ++G+ P   T N L++G
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440

Query: 208 CAKAKRIEESLSYCEQMMSRKLL-----------PSCSAFNEMIRRLCECGNAKQANGML 256
                +++++L   + M   K+            P    +N +I  L   G   +A  + 
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G  P+ ITY+ +I G  K+  + E  +++  M  KS SP +  +T+LI+  C+ 
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G++++  + F  M    +V     Y +L+    + GN   AL + +EM++ G+ P T
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDT 617



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 11/272 (4%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E+ + L   M+R   +   I +  ++   V+M  L+  + ++ +M  R    N++ +T 
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +  +C   K+  A     ++   G  P   TF+ L+ G     RI E+L    QM    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK-- 176

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   F  ++  LC  G   +A  +L   L+ G  PN+ITY  ++ G  K G+    L
Sbjct: 177 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 289 KLYYEMEYKS-ISPTLPAY-----TSLISSLCQCGKLEEADKYFK-IMKSHSLVPGVDIY 341
            L  +ME  S I P +  +     T +I+  C  G+  EA +  + +++   + P V  Y
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +L+   +++G   +A  L +EM+  G+ PST
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPST 326



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 126/293 (43%), Gaps = 11/293 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S  +I+FNTLI    ++ R D   ++   M E     N  T  TLI   C+ G 
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI-------- 125
           L    D+L  +      P V+   +L+  +    ++++ + + K M +  M         
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471

Query: 126 ---HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D   Y++++   +       A  +YEEM  RG   ++  Y + I   C+  +++EA
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +   M +    P   TF  LI G  KA R+++ L    +M  R ++ +   +  +I  
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
             + GN   A  +    +  G  P+ IT  +++ G   + E++  + +  +++
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 78/187 (41%), Gaps = 36/187 (19%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG     I++N++IH + K  R D   +++  M      PN  T  TLI+  CK G 
Sbjct: 503 MPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG- 561

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                                             R+++G+ L   M R+ ++ + I Y  
Sbjct: 562 ----------------------------------RVDDGLELFCEMGRRGIVANAITYIT 587

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NA 192
           +++   K+ N+  AL +++EM+  G   ++      +       +++ A  ++++++ + 
Sbjct: 588 LIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMSV 647

Query: 193 GLKPYDE 199
           G +  DE
Sbjct: 648 GYQLEDE 654


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 174/364 (47%), Gaps = 7/364 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RLFE        +++RG +   ++   LI+ + ++       R+ Q M++     +  T 
Sbjct: 378 RLFE-------EMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTY 430

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   CK G +     + + + G+R +P V+  T+L   + ++  +     LL  M  
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  +   Y+ ++    K  NLE A+ +  EM   G   + + YTT I   C+ G+ + 
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR 550

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A+ ++QEM + G+KP   T+N+L+ G   + R+E      E M+ + + P+   +N +++
Sbjct: 551 AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMK 610

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           + C   N K    +      +  +PNE TY+ LI G+ K   ++E L  + EM  K +  
Sbjct: 611 QYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRL 670

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           T  +Y++LI  L +  K  EA  +F  M++  L    D+Y   + I   + N    + LC
Sbjct: 671 TASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLC 730

Query: 362 EEMV 365
           +E+V
Sbjct: 731 DELV 734



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 160/326 (49%)

Query: 47  QHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQE 106
           QH  E    P+  T  T++   C  G+L+  V +LD +  K       V TS+I  +  +
Sbjct: 276 QHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNK 335

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
            ++ + + +L+ M    +  D + ++ ++       +L +A  ++EEM KRG +A+   +
Sbjct: 336 GQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTH 395

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           T  I   C  G+++EA+ ++QEM + GL     T+ +LI+G  K   + E+     +M+ 
Sbjct: 396 TALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVG 455

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           R++ P+   +  +   LC+ G+ + AN +L    +KG   N  TY+ LI G  K G +++
Sbjct: 456 RRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQ 515

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            +++  EME       +  YT+LI +LC+ G+ + A    + M    + P +  Y  L+ 
Sbjct: 516 AMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMN 575

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
                G       L E M+ + ++P+
Sbjct: 576 GFCMSGRVEGGKKLLEWMLEKNVRPN 601



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 151/312 (48%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+IS  C  G L     + + +  +  +   + +T+LI  + +   ++E   +L+ M+ K
Sbjct: 362 TVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDK 421

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y++++    K  N+  A  V+ EM+ R  + N   YT      C+ G +  A
Sbjct: 422 GLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAA 481

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L+ EM N GL+    T+N LI G  K   +E+++    +M +         +  +I  
Sbjct: 482 NELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDT 541

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G   +A+ ML   LDKG  P+  TY+ L+ G+   G ++   KL   M  K++ P 
Sbjct: 542 LCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPN 601

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y SL+   C    ++   + +K M S  + P  + Y  L+  H +  N  +AL+  +
Sbjct: 602 VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQ 661

Query: 363 EMVSEGLKPSTS 374
           EM+ +GL+ + S
Sbjct: 662 EMIEKGLRLTAS 673


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 178/391 (45%), Gaps = 32/391 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L   GF    +S+ T++  +  + R + V  ++  M+E    PNE T   L+   C+GG 
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +L+++ G  C+    +   +I  I ++ R+++    L  M       DTI+Y+ 
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +    E A  + +EM+++    N   + TFI   C+ G IE+A  L+++M   G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420

Query: 194 L--------------------------------KPYDETFNLLIEGCAKAKRIEESLSYC 221
                                            KP   T+  L+ G   A+R++ +    
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELL 480

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            +M+ +   P+   FN ++   C+ G   +A  ++   ++ G +PN ITY+ L+ G  K+
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 540

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
              +E L+L + +    +SP +  Y+S+I  L +  ++EEA K F I++   + P   IY
Sbjct: 541 CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIY 600

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++    ++ N   A+     MVS G  P+
Sbjct: 601 NKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 170/357 (47%), Gaps = 3/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   S++++  L+  V KS        +   M      PN  T   +I+ +C+ G++ 
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              + L+R+      P  +  T+++  +   +R E+   L   M+ KN + + + + ++V
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +E A+ V E+M   G +AN+ +    I   C+ G++++A   +  M + G  
Sbjct: 293 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 352

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++  +++G  +A+R E++    ++M+ +   P+   FN  I  LC+ G  +QA  +
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    + G   N +TY+ L+ G+  +G +   L+L+Y M  K   P    YT+L++ LC 
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCN 469

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +L+ A +    M      P V  +  LV    +KG   +A+ L E+M+  G  P+
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 6/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R  E+ G ++ + ++NTL+    +  + D   R+   M      P+  T   +I 
Sbjct: 97  AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIR 153

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G++   + +LD +  + C P V+  T L+  + +     + M +L  M  K    
Sbjct: 154 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP 213

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++I+    +   ++ A      +   GF  ++  YTT +   C   + E+   L 
Sbjct: 214 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM      P + TF++L+    +   +E ++   EQM       + +  N +I  +C+ 
Sbjct: 274 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A   L      G SP+ I+Y+ ++ G  +    ++  +L  EM  K+  P    +
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            + I  LCQ G +E+A    + M  H     +  Y +LV     +G    AL L     S
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL---FYS 450

Query: 367 EGLKPST 373
              KP+T
Sbjct: 451 MPCKPNT 457



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 4/277 (1%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           R+I  + + E   L+ R   +    D    + ++    +      A  V     + G + 
Sbjct: 52  RLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV 111

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           + F Y T +  YC YG+++ A  L+  M  A   P   T+  +I G     R+ E+LS  
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + M+ R   PS   +  ++  +C+     QA  +L     KG +PN +TY+ +I G  +E
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + +  +    +      P   +YT+++  LC   + E+ ++ F  M   + +P    +
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           + LV      G   +A+ + E+M   G   +T+ LC+
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT-LCN 324



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 139/320 (43%), Gaps = 32/320 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     +   G S   IS+ T++  + +++R +    + + M+     PNE T  T I 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 67  ALCKGGQLQTYVDMLDRI--HG------------------------------KRCSPMVI 94
            LC+ G ++    +++++  HG                                C P  I
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458

Query: 95  VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM 154
             T+L+  +   ER++    LL  ML+K+   + + ++++V    +   ++ A+ + E+M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           ++ G + N   Y T +    +    EEA  L+  + + G+ P   T++ +I   ++  R+
Sbjct: 519 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           EE++     +    + P    +N+++  LC+  N   A       +  G  PNE+TY  L
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 275 IGGYAKEGEIQEVLKLYYEM 294
           I G A E  ++E   L  E+
Sbjct: 639 IEGLANEDFLKETRDLLREL 658



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 97/207 (46%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++ TL+  +  ++R D    +   ML+    PN  T   L+S  C+ G +   ++++++
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C+P +I   +L+  I ++   EE + LL  ++   +  D + YS I+    +   
Sbjct: 518 MMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E A+ ++  +   G    + +Y   + A C+    + A      M + G  P + T+  
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 637

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLL 230
           LIEG A    ++E+     ++ SR +L
Sbjct: 638 LIEGLANEDFLKETRDLLRELCSRGVL 664



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 6/149 (4%)

Query: 227 RKLLPSCSAFNEM---IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           R   PS S+ N     +RRL    +  +A  ++  A  +G +P+    + LI    + G 
Sbjct: 34  RPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGR 93

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
             +  ++    E    +  + AY +L++  C+ G+L+ A    +++ S  + P    Y  
Sbjct: 94  TSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR---RLIASMPVAPDAYTYTP 150

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++    ++G   +AL L ++M+  G +PS
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRGCQPS 179


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 166/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG    ++++N++I  + K+   D    +   M++N   P+  T  +++   C  GQ +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++      P V+  + L+  + +  R  E   +   M ++ +  +   Y  ++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   + +V++  I AY   GK+++A  +  +M   GL 
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLN 403

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  +I    K+ R+E+++ Y EQM+   L P    +N +I  LC C   ++A  +
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   N I ++ +I  + KEG + E  KL+  M    + P +  Y +LI+  C 
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA K    M S  L P    Y +L+  + +      AL L +EM S G+ P 
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 181/379 (47%), Gaps = 4/379 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M E    PN  +  
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162

Query: 63  TLISALCKGGQLQTYVDMLDRI---HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
            L+  LC   + Q  +++L  +    G    P V+  T++I    +E   ++       M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + ++ D + Y+ I+ A  K + ++ A+ V   M+K G   +   Y + +  YC  G+ 
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA   +++M + G++P   T++LL++   K  R  E+    + M  R L P  + +  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           ++     G   + +G+L L +  G  P+   +S LI  YA +G++ + + ++ +M  + +
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGL 402

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P    Y ++I  LC+ G++E+A  YF+ M    L PG  +Y SL+          +A  
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 360 LCEEMVSEGLKPSTSYLCS 378
           L  EM+  G+  +T +  S
Sbjct: 463 LILEMLDRGICLNTIFFNS 481



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 166/356 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    ++S+ T+I+   K   +D  +  Y  ML+    P+  T  ++I+ALCK   +   
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L+ +      P  +   S++       + +E +  LK+M    +  D + YSL++  
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K      A  +++ M KRG       Y T +  Y   G + E + L+  M   G+ P 
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              F++LI   A   ++++++    +M  + L P+   +  +I  LC+ G  + A     
Sbjct: 371 HYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +D+G SP  I Y+ LI G     + +   +L  EM  + I      + S+I S C+ G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++ E++K F++M    + P V  Y +L+  +   G   +A+ L   MVS GLKP+T
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 161/338 (47%), Gaps = 6/338 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G     +++N+++H    S +        + M  +   P+  T   L+ 
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+      + D +  +   P +    +L+     +  + E   LL  M+R  +  
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +S+++ A      ++ A++V+ +M ++G + N+  Y   IG  C+ G++E+A    
Sbjct: 370 DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429

Query: 187 QEMENAGLKPYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           ++M + GL P +  +N LI G   C K +R EE +    +M+ R +  +   FN +I   
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSH 486

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   ++  +  L +  G  PN ITY+ LI GY   G++ E +KL   M    + P  
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             Y++LI+  C+  ++E+A   FK M+S  + P +  Y
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 168/411 (40%), Gaps = 43/411 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE---NIRYPNEATI 61
           E A  V   L +RG   S+   N  +  V +      V R Y  M     +   P+  T 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-------- 113
             LI   C+ G+L      L  +  K      I  T L+  +  ++R  + M        
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 114 ------------VLLKRMLRKN-------MIH------------DTIAYSLIVYAKVKMR 142
                       +LLK +  +N       ++H            D ++Y+ ++    K  
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           + + A   Y EML RG   +   Y + I A C+   +++A  ++  M   G+ P   T+N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++ G   + + +E++ + ++M S  + P    ++ ++  LC+ G   +A  +      +
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P   TY  L+ GYA +G + E+  L   M    I P    ++ LI +    GK+++A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              F  M+   L P    Y +++GI  + G    A+   E+M+ EGL P  
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 148/325 (45%), Gaps = 4/325 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F+ LI       + D    ++  M +    PN  T   +I  LCK G+++  +   +++ 
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  SP  IV  SLI  +    + E    L+  ML + +  +TI ++ I+ +  K   + 
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  ++E M++ G   N   Y T I  YC  GK++EA  L+  M + GLKP   T++ LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+E++L   ++M S  + P    +N +++ L +      A  +     + G  
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     + L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673

Query: 326 FKIMKSHSLVPGVDIY----ESLVG 346
           F    S+ LVP    Y    E+++G
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIG 698



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/359 (20%), Positives = 157/359 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    + ++ TL+           +  +   M+ N  +P+      LI A    G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +  ++  +  +P  +   ++I  + +  R+E+ M+  ++M+ + +    I Y+ 
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++        E A  +  EML RG   N+  + + I ++C+ G++ E+  L + M   G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+N LI G   A +++E++     M+S  L P+   ++ +I   C+    + A 
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G SP+ ITY+ ++ G  +        +LY  +        L  Y  ++  L
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+    ++A + F+ +    L      +  ++   L+ G   +A  L     S GL P+
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 9/327 (2%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y EQ    G S   I +N+LIH +   ++ +    +   ML+     N     ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   +++ RI  K   P VI   +LI       +++E M LL  M+  
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVK---PNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +T+ YS ++    K+  +E ALV+++EM   G S +   Y   +    +  +   A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K K  +++L   + +    L      FN MI  
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  PN  TY  +      +G ++E+ +L+  ME    +  
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM 329
                 ++  L Q G++  A  Y  ++
Sbjct: 721 SGMLNFIVRELLQRGEITRAGTYLSMI 747



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 3/307 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG  L+ I FN++I    K  R     ++++ M+     PN  T  TLI+  C  G++ 
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +L  +      P  +  ++LI    +  R+E+ +VL K M    +  D I Y++I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               + R   +A  +Y  + + G       Y   +   C+    ++A  + Q +    LK
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               TFN++I+   K  R +E+        S  L+P+   +  M   +   G  ++ + +
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT-SLISSLC 314
                D G + +    + ++    + GEI         ++ K  S  L A T SL   L 
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS--LEASTASLFIDLL 766

Query: 315 QCGKLEE 321
             GK +E
Sbjct: 767 SGGKYQE 773


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 35/366 (9%)

Query: 42  VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
            WR++  M      PN  T   LIS LC  G L+  + +  R+      P  +   +LI 
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            +++  RI+   V+L  M R     + + Y+ ++     + + + A++V   ML+RG SA
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 162 NSFVYTTFIGAYCEYG-----------------------------------KIEEANCLM 186
           N   Y T I  YC+ G                                   K+E A  L 
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + GL P + T+  LI+G  K ++++ + S  E M      P+   +N +I  L + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N   A  +  + +++G  PN +TY+ +I G  K G     L+++ +M  +   P L  Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +SLI +L Q GK+EEA+  F  ++ H L+P    Y  ++  ++  G    A +    M+ 
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 367 EGLKPS 372
            G +P+
Sbjct: 699 AGCQPT 704



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 163/369 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  V   + + G   + ++++TLI+ +  S R +  + + + M+ +   P   T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I ALC  G  +    +   +  K C P V   T+LI  +     ++  + L  RM R  
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +T+ Y+ ++   V+ R ++ A VV   M + G S N   Y   I  YC  G  ++A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +M  M   G      T+N +I+G   +     +L   + M      P   ++ E+I   
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+    + A G+    +D G  PNE+TY+ LI GY K+ ++     L   M+     P +
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI  L +      A++  K+M    + P V  Y +++    + G+ + AL +  +
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 364 MVSEGLKPS 372
           M+ +G  P+
Sbjct: 626 MIEQGCLPN 634



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 156/343 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L +VA  +   + + G   + +++N LI+++ ++ R    + +   M  N   PN  T  
Sbjct: 370 LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYN 429

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +I   C  G  +  + +++ +  +  S  ++   ++I            + +L  M   
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 489

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D  +Y+ ++    K+  +ESA  ++ EM+  G   N   YT  I  YC+  K++ A
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++ M+ +G +P  +T+N+LI G  K      +   C+ M+   + P+   +  MI  
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+   A  M    +++G  PN +TYS LI    +EG+++E   L+ E+E   + P 
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              Y  +I +    GK+E A  +   M      P +  Y  L+
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 153/355 (43%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +L+ +N +I+ + K         I + + E+   P+  T  ++I   C+   L + 
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + +++  + C P  +  ++LI  +    R+ E   L++ M+   ++      +  + A
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              M   E A  ++ +M  +G   N + YT  I   C  G ++ A  L   M   G+ P 
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI    + +RI+ +      M      P+   +NEMI+  C  G+ K+A  ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L +G S N +TY+ +I GY   G     L++   M      P   +YT LI   C+  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K+E A   F  M    L P    Y +L+  + +      A  L E M   G +P+
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 155/359 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L Q G  + L +++ L+  +++      V   Y  ML     PN      +I+ALCK G 
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     ++ ++     SP     TS+IL   ++  ++  + +  +M ++    +T+ YS 
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        +  A  +  EM+  G    +   T  I A C+ G  E+A  L  +M+N G
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 350

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   T+  LI G   +  ++ ++    +M    + P+   +N +I  L E    K A 
Sbjct: 351 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L L    G SPN +TY+ +I GY   G+ ++ + +   M  +  S  L  Y ++I   
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G    A +   +M+     P    Y  L+    +      A  L  EMV +GL P+
Sbjct: 471 CDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPN 529



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 113/267 (42%)

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           +E +   M  L  + +  +     AYS ++    ++    + +  Y  ML  G   N  +
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   I A C+ G + +A  +M+++  + + P   T+  +I G  +   ++ +L    QM 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                P+   ++ +I  LC+ G   +A  ++   +  G  P   T +  I      G  +
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +  +L+ +M+ K   P +  YT+LIS LC  G L+ A   F  M    + P    Y +L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
            I +E      A  +   M   G  P+
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPN 424



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/332 (18%), Positives = 132/332 (39%), Gaps = 28/332 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A ++C+ + + G   +++++  +I  + K+    L   ++  M+E    PN  T  +
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI AL + G+++   ++   +      P  I    +I   I   ++E     L RM++  
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700

Query: 124 MIHDTIAYSLIVYA--------------------------KVKMRNLESALVVYEEMLKR 157
                  Y +++                            +   ++  S +      L  
Sbjct: 701 CQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDP 760

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G S    V    +      G+  EAN L+  M + GL P  E +N L+    + + ++ +
Sbjct: 761 GLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 818

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   + M ++      + + E+I  LC+    K+A       L + ++P+++  + LI G
Sbjct: 819 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             ++G     ++  + ME +   P+   YT L
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 52/105 (49%)

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             YS L+   ++ G    V+  Y+ M  + + P L  Y ++I++LC+ G + +A+   K 
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +    + P    Y S++  H  K +   AL +  +M  EG +P+T
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 69/149 (46%)

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           V V  +L+  +    R  E   LL  M+ + +  D  AY+ ++ + +++RN++ A+ V++
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
            M  +G   +   Y   I A C+  + +EA    + M      P D    +LI+G  +  
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
             +  + +   M +R+ +PS   +  + R
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 163/349 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+  +N LI  + K  R +   +++  ML     P+  T  TLI   CK G  +    + 
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+      P +I   +L+  + +   +E+   +LK M     + D   +S++       
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E+AL VYE  +  G   N++  +  + A C+ GKIE+A  ++      GL P +  +
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+G  +   +  +    E M  + + P   A+N +IRR CE G  + A   +     
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG SP+  TY+ LIGGY ++ E  +   +  EME     P + +Y +LI+ LC+  KL E
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           A    + M+   + P V IY  L+     KG    A    +EM+ +G++
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 189/408 (46%), Gaps = 41/408 (10%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A +V + ++  GF     +F+ L    + +++ +    +Y+  +++    N  T  
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++ALCK G+++   ++L R   K   P  ++  ++I    ++  +    + ++ M ++
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418

Query: 123 NMIHDTIAYSLIV---------------YAKVKMRNLESALVVY---------------- 151
            M  D +AY+ ++                 K+K++ +  ++  Y                
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478

Query: 152 ----EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
               +EM   G   N   Y T I   C+  K+ EA  + ++ME+ G+ P    +N+LI+G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
           C    +IE++  + ++M+ + +  +   +N +I  L   G   +A  +L     KG  P+
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
             TY+ LI GY   G +Q  + LY EM+   I PTL  Y  LI SLC    +E  ++ F 
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFG 657

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV--SEGLKPST 373
            M   SL P + +Y  ++  +   G+  KA +L ++M+  S GL  +T
Sbjct: 658 EM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 171/375 (45%), Gaps = 14/375 (3%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E +F V   ++      SLI+FNTL+  + K+   +    + + M +    P+  T   L
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325

Query: 65  ISALCKG-------GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
                         G  +T VD   +++   CS  +++N      + +E +IE+   +L 
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS--ILLNA-----LCKEGKIEKAEEILG 378

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           R + K ++ + + Y+ ++    +  +L  A +  E M K+G   +   Y   I  +CE G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++E A   + +M+  G+ P  ET+N+LI G  +    ++     ++M     +P+  ++ 
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I  LC+     +A  +     D+G SP    Y+ LI G   +G+I++  +   EM  K
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            I   L  Y +LI  L   GKL EA+     +    L P V  Y SL+  +   GN  + 
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618

Query: 358 LHLCEEMVSEGLKPS 372
           + L EEM   G+KP+
Sbjct: 619 IALYEEMKRSGIKPT 633



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 170/372 (45%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++   A D+   L   G   S  S   L+  + K+ +  +   ++ ++LE+   P++   
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              I A  K   +   +++ +R+   R  P V +   LI  + + +R+ +   L   ML 
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++   I Y+ ++    K  N E +  V E M       +   + T +    + G +E+
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +++EM++ G  P   TF++L +G +  ++ E +L   E  +   +  +    + ++ 
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G  ++A  +L   + KG  PNE+ Y+ +I GY ++G++         ME + + P
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              AY  LI   C+ G++E A+K    MK   + P V+ Y  L+G +  K    K   + 
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482

Query: 362 EEMVSEGLKPST 373
           +EM   G  P+ 
Sbjct: 483 KEMEDNGTMPNV 494



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 146/353 (41%), Gaps = 39/353 (11%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S S+ ++N LI    +    D  + I + M +N   PN  +  TLI+ LCKG +L  
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +   +  +  SP V +   LI     + +IE+     K ML+K +  + + Y+ ++ 
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  L  A  +  E+ ++G   + F Y + I  Y   G ++    L +EM+ +G+KP
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
             +T++LLI  C K     E +   E++           F EM                 
Sbjct: 633 TLKTYHLLISLCTK-----EGIELTERL-----------FGEM----------------- 659

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                    P+ + Y+ ++  YA  G++++   L  +M  KSI      Y SLI    + 
Sbjct: 660 ------SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           GKL E       M +  + P  D Y  +V  H E  +   A     EM  +G 
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 41/313 (13%)

Query: 99  LILRIIQEER--IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           L+L ++  E   I E   L   +  + +   + + +L++   VK +     + V+  +L+
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
             F  + F+Y   I A  +   + +   L   M++  + P    +N+LI+G  K KR+ +
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ------------------------- 251
           +    ++M++R+LLPS   +N +I   C+ GN ++                         
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292

Query: 252 ----------ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                     A  +L    D GF P+  T+S L  GY+   + +  L +Y       +  
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK- 351

Query: 302 TLPAYTS--LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            + AYT   L+++LC+ GK+E+A++      +  LVP   IY +++  +  KG+   A  
Sbjct: 352 -MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410

Query: 360 LCEEMVSEGLKPS 372
             E M  +G+KP 
Sbjct: 411 KIEAMEKQGMKPD 423



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 4/285 (1%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +E RG S  +  +N LI       + +  +R  + ML+     N  T  TLI  L 
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G+L    D+L  I  K   P V    SLI        ++  + L + M R  +     
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y L++    K   +E    ++ EM       +  VY   +  Y  +G +E+A  L ++M
Sbjct: 636 TYHLLISLCTK-EGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
               +     T+N LI G  K  ++ E  S  ++M +R++ P    +N +++  CE  + 
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDY 751

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             A        +KGF  +    + L+ G  +E   +E   +  EM
Sbjct: 752 MSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 118/252 (46%), Gaps = 12/252 (4%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTK----SDRNDLVWRIYQHMLENIRYPNEAT 60
           E AF   + + ++G  L+L+++NTLI  ++     S+  DL+  I +  L+    P+  T
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK----PDVFT 601

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +LIS     G +Q  + + + +      P  +    L++ +  +E IE    L   M 
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKP-TLKTYHLLISLCTKEGIELTERLFGEM- 659

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             ++  D + Y+ +++      ++E A  + ++M+++    +   Y + I    + GK+ 
Sbjct: 660 --SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E   L+ EM    ++P  +T+N++++G  + K    +  +  +M  +  L      NE++
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777

Query: 241 RRLCECGNAKQA 252
             L E   +K+A
Sbjct: 778 SGLKEEWRSKEA 789



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 51/270 (18%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           ++Q+ RIE    +L  +LR     D+  ++         + L SA  +    LK  FS  
Sbjct: 65  LLQQNRIETARGVLSSLLR----SDSTPFA-------SPKELFSAFSLSSPSLKHDFS-- 111

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y        E   I EA  L   + N G+ P  ++  LL++   K K+   ++    
Sbjct: 112 ---YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTI---- 164

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
                                         N  L + L+  F P++  Y   I    K  
Sbjct: 165 ------------------------------NVFLNI-LESDFRPSKFMYGKAIQAAVKLS 193

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           ++ + L+L+  M++  I P++  Y  LI  LC+  ++ +A++ F  M +  L+P +  Y 
Sbjct: 194 DVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+  + + GN  K+  + E M ++ ++PS
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPS 283


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 173/361 (47%), Gaps = 2/361 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++GF   +++++T+I  + K+ +      + + M E    P+ AT   ++  LC+ G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    ++  ++  + CS   +   +LI  + ++E IE    LL+ M  K    D I Y+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    +M  +  A   ++ M  RG+S +   Y   + A  + GK+ EA  L + M+ A 
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 194 LK--PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            K  P   T+N LI+G  + ++ +E++   + ++++  +P    +N ++  L    N  +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  M    +D G +PN  TYS ++ G+ + G +   L+LY EM  K  SP +    ++I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+  K+++A K  + M     VP V  Y  L+    +     KA  L   MV  G  P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 372 S 372
            
Sbjct: 361 D 361



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/399 (22%), Positives = 183/399 (45%), Gaps = 41/399 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRTLISALCKG 71
           +  RG+S  ++++N L+  + K  +    W +++ M    R   P+  T  TLI   C+ 
Sbjct: 141 MPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRV 200

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            +    + +   +  K   P  +   S++L + ++  ++E   + K+M+      +   Y
Sbjct: 201 EKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATY 260

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+++    ++ N+   L +YEEM ++ FS +  +    I   C+  K+++A+ +++EM  
Sbjct: 261 SIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSK 320

Query: 192 AGLKPYDETFNLLIE---------------------GCA--------------KAKRIEE 216
            G  P   T+N+L++                     GCA              K  ++ +
Sbjct: 321 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD 380

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +    ++M+ RKL+P    FN ++  LC+ G   +A  +L +  +    P+ +T + L+ 
Sbjct: 381 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMH 440

Query: 277 GYAKEGEIQEVLKLY-YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM--KSHS 333
           G  ++    E ++L+ Y +E  +++  LP +  +++ LC+ GKL +A  +FK M      
Sbjct: 441 GLCRDKRTDEAVRLFQYMVEKGTVADVLP-HNIVLAGLCREGKLAQALLFFKSMVKSDGE 499

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             P V  Y +LV   +E G   +A+   ++M   G  P 
Sbjct: 500 FSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 149/291 (51%), Gaps = 3/291 (1%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+  +++I  + +  ++ E + +++ M  K +  D   Y++IV    +   ++ A  +
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           + +M++RG SAN+  Y   I   C+   IE A  L++EM + G +P + T+N ++ G  +
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-TLAL-DKGFSPNE 268
             ++ E+  + + M SR   P   A+N ++  L + G   +A G+  T+ + D+  +P+ 
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           ITY+ LI G+ +  +  E +KL+ ++  K   P    Y S++  L +   ++EA++ FK 
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           M      P    Y  ++  H   GN A+ L L EEM  +   P    LC+A
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDV-LLCNA 297



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 182/391 (46%), Gaps = 39/391 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG S + +++N LI+ + K +  +  +++ + M      P+  T  T++S LC+ G++ 
Sbjct: 73  ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVS 132

Query: 76  -------------------TYVDMLDRIH------------------GKRCSPMVIVNTS 98
                               Y  +LD ++                   ++ +P +I   +
Sbjct: 133 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNT 192

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI    + E+ +E M L K ++ K  + DT+ Y+ I+    +  N++ A  ++++M+  G
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG 252

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            + N   Y+  +  +C  G +     L +EM      P     N +I+   KAK+++++ 
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAH 312

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              E+M     +P    +N ++  LC+     +A+ + +  +D G +P+ ++YS ++ G 
Sbjct: 313 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 372

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP-G 337
            K  ++ +   L+  M  + + P +  +  L+  LC+ GKL+EA     +M  H+++P G
Sbjct: 373 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDG 432

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           V     + G+  +K    +A+ L + MV +G
Sbjct: 433 VTCTTLMHGLCRDK-RTDEAVRLFQYMVEKG 462



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/356 (21%), Positives = 178/356 (50%), Gaps = 4/356 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G+    +++N+++  + +    D    +++ M+++   PN AT   ++S  C+ G +  
Sbjct: 216 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMAR 275

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +++ + +  KR SP V++  ++I  + + +++++   +L+ M +   + D + Y++++ 
Sbjct: 276 CLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 335

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   ++ A  ++  M+  G + +   Y+  +   C+  K+ +A  L   M    L P
Sbjct: 336 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 395

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TFN+L++G  KA +++E+    + M    +LP       ++  LC      +A  + 
Sbjct: 396 DVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLF 455

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS---ISPTLPAYTSLISSL 313
              ++KG   + + ++ ++ G  +EG++ + L L+++   KS    SP +  YT+L+++L
Sbjct: 456 QYMVEKGTVADVLPHNIVLAGLCREGKLAQAL-LFFKSMVKSDGEFSPDVVTYTTLVNAL 514

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            + G++++A  YF+ M      P    Y +L+    ++G   +A  L + M  +G 
Sbjct: 515 IEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 116/222 (52%), Gaps = 2/222 (0%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M ++GF  +   Y+T I   C+ GK+ EA  +++EM   G+ P   T+ ++++   +A +
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           ++E+     +M+ R    +  A+N +I  LC+  N ++A  +L     KG+ P+ ITY+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK--S 331
           ++ G  + G++ E  + +  M  +  SP + AY  L+ +L + GK+ EA   FK M    
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + P +  Y +L+          +A+ L ++++++G  P T
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDT 222



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 114/233 (48%), Gaps = 2/233 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A ++   +   G +  ++S++ +++ + K+++      ++  M+E    P+  T  
Sbjct: 342 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 401

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+  LCK G+L    D+LD +      P  +  T+L+  + +++R +E + L + M+ K
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG--FSANSFVYTTFIGAYCEYGKIE 180
             + D + +++++    +   L  AL+ ++ M+K    FS +   YTT + A  E G+++
Sbjct: 462 GTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVD 521

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           +A    Q+M  +G  P    +N L+ G  K  R  ++    + M  +  L  C
Sbjct: 522 QAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 574



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/260 (19%), Positives = 123/260 (47%), Gaps = 2/260 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + + G    ++++N L+  + K++  D    ++  M++N   P+  +   +++
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  ++     + DR+  ++  P V+    L+  + +  +++E   LL  M   N++ 
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +  + +++   + +  + A+ +++ M+++G  A+   +   +   C  GK+ +A    
Sbjct: 431 DGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFF 490

Query: 187 QEM--ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + M   +    P   T+  L+    +A R+++++ Y +QM      P   A+N ++  L 
Sbjct: 491 KSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLR 550

Query: 245 ECGNAKQANGMLTLALDKGF 264
           + G   QA+ +     +KGF
Sbjct: 551 KQGRHIQADRLTQAMKEKGF 570



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 71/144 (49%), Gaps = 4/144 (2%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT---YVDM 80
           ++  TL+H + +  R D   R++Q+M+E     +      +++ LC+ G+L     +   
Sbjct: 433 VTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKS 492

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           + +  G+  SP V+  T+L+  +I+  R+++ +   ++M       D +AY+ ++    K
Sbjct: 493 MVKSDGE-FSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRK 551

Query: 141 MRNLESALVVYEEMLKRGFSANSF 164
                 A  + + M ++GF ++ F
Sbjct: 552 QGRHIQADRLTQAMKEKGFLSDCF 575


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 183/411 (44%), Gaps = 36/411 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G   SL S N L++ + +S    +   +Y  M      P+E T+  +  
Sbjct: 167 ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAK 226

Query: 67  ALCKGGQLQTYVDMLDRIHG-----------------------------------KRCSP 91
           A C+ G++   V+ ++ + G                                   K  SP
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSP 286

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVV 150
            V+  T L+    ++ R+EE   ++K M    +++ D +AY +++    +   ++ A  V
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             EM   G   N FVY T I   C+ G++EE   ++QEME+ G++P   ++N LI+G  +
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCR 406

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              + ++   C  M+   L  +   +N +++  C       A  +  L L +G +PNEI+
Sbjct: 407 EGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            S L+ G  K G+ ++ L L+ E   + ++  +  + ++I+ LC+ G++ EA++    MK
Sbjct: 467 CSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAST 381
                P    Y +L   + + G    A HL  +M   G  PS     S  T
Sbjct: 527 ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFIT 577



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 174/362 (48%), Gaps = 13/362 (3%)

Query: 14  LEQRGFSLSLISFNTLI--HVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           +E  GF+ S+  FN+ I  H + K      V  I+  M      PN  T   LI+  CK 
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHK--VNDIHSEMSARGLSPNLVTYGALIAGWCKE 617

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L    ++   +     +P V + ++L+    +E +++E  ++L++++  +MI    + 
Sbjct: 618 GNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI-PGCSI 676

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S I   K+          V + +      + + ++   I   C+ G+I +A  L + + N
Sbjct: 677 STIEIDKISH--------VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRN 728

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
               P + T++ LI GCA +  I+E+ S  + M+S  L P+   +N +I  LC+ G   +
Sbjct: 729 KRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSR 788

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +      KG SPN ITY+ LI  Y KEG+  E  KL  +M  + I PT+  Y+ LI 
Sbjct: 789 AVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIY 848

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G +EEA K    M  +++ P    Y +L+  +++ GN  +   L +EM   GL P
Sbjct: 849 GLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908

Query: 372 ST 373
           + 
Sbjct: 909 TN 910



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 183/400 (45%), Gaps = 26/400 (6%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ +    RG + ++I+FNT+I+ + K  R      +   M E    P+  T RTL
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
               CK GQL T   +++++     +P V +  S I      ++  +   +   M  + +
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y  ++    K  NL  A  +Y EM+  G + N F+ +  +  + + GK++EAN 
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 185 LMQEMENAGLKP--------------------------YDETFNLLIEGCAKAKRIEESL 218
           ++Q++ N  + P                           +  +N++I G  K+ RI ++ 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S  E + +++ LP    ++ +I      G+  +A  +  + L  G +PN ITY+ LI G 
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K G++   + L+ +++ K ISP    Y +LI   C+ GK  EA K  + M    + P V
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTV 840

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             Y  L+     +G   +A+ L ++M+   + P+    C+
Sbjct: 841 ITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 178/427 (41%), Gaps = 61/427 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++CR + + G + + +++NTL+         D   R++  ML+    PNE +  TL+ 
Sbjct: 413 AFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLD 472

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K G+ +  +++      +  +  VI   ++I  + +  R+ E   LL RM       
Sbjct: 473 GLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPP 532

Query: 127 DTIAYSLIVYAKVKMRNLESAL-----------------------------------VVY 151
           D++ Y  +     K+  L +A                                     ++
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM  RG S N   Y   I  +C+ G + EA  L  EM N G+ P     + L+    K 
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652

Query: 212 KRIEESLSYCEQMMSRKLLPSCS--------------------------AFNEMIRRLCE 245
            +++E+    +++++  ++P CS                           +N +I  LC+
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCK 712

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G    A  +     +K F P+  TYS LI G A  G I E   L   M    ++P +  
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y SLI  LC+ GKL  A   F  ++S  + P    Y +L+  + ++G   +A  L ++MV
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832

Query: 366 SEGLKPS 372
            EG++P+
Sbjct: 833 EEGIQPT 839



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 179/380 (47%), Gaps = 2/380 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEA 59
           M   E A  +   L+++G S +++++  L+    K  R +   R+ + M E      +E 
Sbjct: 266 MGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV 325

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I+  C+ G++     + + +        + V  ++I  + +  R+EE   +L+ M
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               M  D  +Y+ ++    +  ++  A  +   M++ G +A +  Y T +  +C    I
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           ++A  L   M   G+ P + + + L++G  KA + E++L+  ++ ++R L  +   FN +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+ G   +A  +L    +    P+ +TY  L  GY K G++     L  +ME+   
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P++  + S I+      +  + +     M +  L P +  Y +L+    ++GN  +A +
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 360 LCEEMVSEGLKPSTSYLCSA 379
           L  EMV+ G+ P+  ++CSA
Sbjct: 626 LYFEMVNNGMNPNV-FICSA 644



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 162/358 (45%), Gaps = 4/358 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++  +I+   +  R D   R+   M +   + N     T+I+ LCK G+++    +L  
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P      +LI    +E  + +   + + M+R  +   T+ Y+ ++     +  
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ AL ++  MLKRG + N    +T +    + GK E+A  L +E    GL     TFN 
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I G  K  R+ E+    ++M   +  P    +  +    C+ G    A  ++      G
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           F+P+   ++  I G+    +  +V  ++ EM  + +SP L  Y +LI+  C+ G L EA 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAST 381
             +  M ++ + P V I  +L+    ++G   +A  + +++V+  + P     CS ST
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG----CSIST 678



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 156/365 (42%), Gaps = 47/365 (12%)

Query: 22  SLISFNTLIHVVTKSDR-NDL----------VWRIYQHMLENIR--YPNEATIRTLISAL 68
           SL+S   L+H++ ++ R +D              ++ H+ E  R    +  +   L+ A 
Sbjct: 99  SLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAH 158

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
              GQL + +++ D +    C P +     L+ +++Q        ++  +M    ++ D 
Sbjct: 159 ADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDE 218

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
              +++  A  +   +  A+   EEM   G   N   Y   +  YC  G  E+A  +++ 
Sbjct: 219 FTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ++  GL P   T+ LL++G  K  R+EE+                     +++ + E G+
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEA-------------------ERVVKEMKETGD 319

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
                    + +D      E+ Y  +I GY + G + +  ++  EM    I   L  Y +
Sbjct: 320 ---------IVVD------EVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT 364

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+ LC+ G++EE  K  + M+   + P    Y +L+  +  +G+  KA  +C  MV  G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 369 LKPST 373
           L  +T
Sbjct: 425 LAATT 429



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 5/167 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +   G + ++I++N+LI+ + KS +      ++  +      PN  T  TLI 
Sbjct: 754 AFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+      +  ++  +   P VI  + LI  +  +  +EE + LL +M+  N+  
Sbjct: 814 EYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDP 873

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           + I Y  +++  +K  N+E    +Y+EM  RG      + T +IG +
Sbjct: 874 NYITYCTLIHGYIKSGNMEEISKLYDEMHIRG-----LLPTNWIGNW 915


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 35/366 (9%)

Query: 42  VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
            WR++  M      PN  T   LIS LC  G L+  + +  R+      P  +   +LI 
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            +++  RI+   V+L  M R     + + Y+ ++     + + + A++V   ML+RG SA
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 162 NSFVYTTFIGAYCEYG-----------------------------------KIEEANCLM 186
           N   Y T I  YC+ G                                   K+E A  L 
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + GL P + T+  LI+G  K ++++ + S  E M      P+   +N +I  L + 
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N   A  +  + +++G  PN +TY+ +I G  K G     L+++ +M  +   P L  Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +SLI +L Q GK+EEA+  F  ++ H L+P    Y  ++  ++  G    A +    M+ 
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 367 EGLKPS 372
            G +P+
Sbjct: 699 AGCQPT 704



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 163/369 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  V   + + G   + ++++TLI+ +  S R +  + + + M+ +   P   T   
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I ALC  G  +    +   +  K C P V   T+LI  +     ++  + L  RM R  
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +T+ Y+ ++   V+ R ++ A VV   M + G S N   Y   I  YC  G  ++A 
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +M  M   G      T+N +I+G   +     +L   + M      P   ++ E+I   
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+    + A G+    +D G  PNE+TY+ LI GY K+ ++     L   M+     P +
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI  L +      A++  K+M    + P V  Y +++    + G+ + AL +  +
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625

Query: 364 MVSEGLKPS 372
           M+ +G  P+
Sbjct: 626 MIEQGCLPN 634



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 156/343 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + +VA  +   + + G   + +++N LI+++ ++ R    + +   M  N   PN  T  
Sbjct: 370 ILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYN 429

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +I   C  G  +  + +++ +  +  S  ++   ++I            + +L  M   
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 489

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D  +Y+ ++    K+  +ESA  ++ EM+  G   N   YT  I  YC+  K++ A
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++ M+ +G +P  +T+N+LI G  K      +   C+ M+   + P+   +  MI  
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+   A  M    +++G  PN +TYS LI    +EG+++E   L+ E+E   + P 
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              Y  +I +    GK+E A  +   M      P +  Y  L+
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 153/355 (43%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +L+ +N +I+ + K         I + + E+   P+  T  ++I   C+   L + 
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + +++  + C P  +  ++LI  +    R+ E   L++ M+   ++      +  + A
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              M   E A  ++ +M  +G   N + YT  I   C  G ++ A  L   M   G+ P 
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI    + +RI+ +      M      P+   +NEMI+  C  G+ K+A  ++ 
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMN 449

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L +G S N +TY+ +I GY   G     L++   M      P   +YT LI   C+  
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K+E A   F  M    L P    Y +L+  + +      A  L E M   G +P+
Sbjct: 510 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 564



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 155/359 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L Q G  + L +++ L+  +++      V   Y  ML     PN      +I+ALCK G 
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 230

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     ++ ++     SP     TS+IL   ++  ++  + +  +M ++    +T+ YS 
Sbjct: 231 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 290

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        +  A  +  EM+  G    +   T  I A C+ G  E+A  L  +M+N G
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 350

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   T+  LI G   +  ++ ++    +M    + P+   +N +I  L E    K A 
Sbjct: 351 CEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L L    G SPN +TY+ +I GY   G+ ++ + +   M  +  S  L  Y ++I   
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G    A +   +M+     P    Y  L+    +      A  L  EMV +GL P+
Sbjct: 471 CDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPN 529



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 113/267 (42%)

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           +E +   M  L  + +  +     AYS ++    ++    + +  Y  ML  G   N  +
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   I A C+ G + +A  +M+++  + + P   T+  +I G  +   ++ +L    QM 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                P+   ++ +I  LC+ G   +A  ++   +  G  P   T +  I      G  +
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 337

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +  +L+ +M+ K   P +  YT+LIS LC  G L+ A   F  M    + P    Y +L+
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALI 397

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
            I +E      A  +   M   G  P+
Sbjct: 398 NILVENRRIKYAFVVLNLMGRNGCSPN 424



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/332 (18%), Positives = 132/332 (39%), Gaps = 28/332 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A ++C+ + + G   +++++  +I  + K+    L   ++  M+E    PN  T  +
Sbjct: 581 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 640

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI AL + G+++   ++   +      P  I    +I   I   ++E     L RM++  
Sbjct: 641 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700

Query: 124 MIHDTIAYSLIVYA--------------------------KVKMRNLESALVVYEEMLKR 157
                  Y +++                            +   ++  S +      L  
Sbjct: 701 CQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDP 760

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G S    V    +      G+  EAN L+  M + GL P  E +N L+    + + ++ +
Sbjct: 761 GLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 818

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   + M ++      + + E+I  LC+    K+A       L + ++P+++  + LI G
Sbjct: 819 MGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             ++G     ++  + ME +   P+   YT L
Sbjct: 879 LLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 52/105 (49%)

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             YS L+   ++ G    V+  Y+ M  + + P L  Y ++I++LC+ G + +A+   K 
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +    + P    Y S++  H  K +   AL +  +M  EG +P+T
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 69/149 (46%)

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           V V  +L+  +    R  E   LL  M+ + +  D  AY+ ++ + +++RN++ A+ V++
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
            M  +G   +   Y   I A C+  + +EA    + M      P D    +LI+G  +  
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
             +  + +   M +R+ +PS   +  + R
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 167/352 (47%), Gaps = 4/352 (1%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N ++  + +   ++L WR++    E +  PN  T   +I  LCK G L     +L R+  
Sbjct: 167 NHILLCLARERSSELAWRLF----EQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKA 222

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
             CSP V+   SLI    +   +EE   L+  M       D + Y+ +V    K   +E 
Sbjct: 223 IGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMER 282

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A   + EM + G  AN   ++TF+ A+C+ G + EA  L  +M   G+KP + T+  L++
Sbjct: 283 AYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVD 342

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  KA R++++L    +M+ + +  +   +  ++  LC+ G   +A  +  L    G   
Sbjct: 343 GTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRA 402

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           NE+ Y+ LI G+      +  L L  EM+ K +   +  Y +LI  LC   KL+EA    
Sbjct: 403 NELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLL 462

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             M    L P   IY +++    +   +++A+ L ++M+  G +P+    C+
Sbjct: 463 NKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCA 514



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 160/352 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S  ++++N+LI    K    + V ++   M      P+  T   L++  CK G+++  
Sbjct: 224 GCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERA 283

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
                 +  +     V+  ++ +    +   + E M L  +M  K M  + + Y+ +V  
Sbjct: 284 YSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDG 343

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   L+ ALV+  EM+++G   N   YT  +   C+ GK+ EA  + + ME AG++  
Sbjct: 344 TCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRAN 403

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           +  +  LI G    K  E +LS   +M  + +    S +  +I  LC      +A  +L 
Sbjct: 404 ELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLN 463

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + G  PN + Y++++    K  +  E + L  +M      P +  Y +L+  LC+ G
Sbjct: 464 KMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAG 523

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            ++EA  +F  M    L P V  Y +LV    + G   KA+ L +EM+ +G+
Sbjct: 524 SIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGM 575



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/398 (21%), Positives = 173/398 (43%), Gaps = 35/398 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A+     +++ G   ++++F+T +    K+       +++  M      PNE T   
Sbjct: 280 MERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTC 339

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G+L   + + + +  +     V+  T L+  + +E ++ E   + + M R  
Sbjct: 340 LVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAG 399

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ +++     +N E AL +  EM  +G   +  +Y   I   C   K++EA 
Sbjct: 400 IRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAK 459

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKR------------------------------ 213
            L+ +M+  GLKP +  +  +++ C KA++                              
Sbjct: 460 SLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGL 519

Query: 214 -----IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                I+E++S+  +M+   L P+  A+  ++  LC+ G   +A  +L   +DKG S + 
Sbjct: 520 CKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDN 579

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           +  + L+ G+ K+G +Q+   L  +M    +   L  YT  +   C    ++EA +    
Sbjct: 580 VVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSE 639

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           M  + + P   +Y  L+    + GN  +A  L  EM S
Sbjct: 640 MIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 165/351 (47%), Gaps = 4/351 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+NT+I  +   D+ D  ++ +  M++N   P+     TLI   CK GQ Q    +L
Sbjct: 6   TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLL 65

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           ++   KR  P V + TS+I    +   ++ G     R +      D I+Y+ ++      
Sbjct: 66  NQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKGLADS 121

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           + ++ A  ++EE+   G S N   YT  I    + G+IE+     +EM  +   P   T+
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++I+G  KA+ + ++    EQM+ +  +P    +  +I    +     +A  +L + L 
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P  +TY  ++ G+ K   I E  ++  +M  +   P L  +TSL+S     G+ EE
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +    M +    P V +Y SL+ +    G   +A H+ + M+ +G  P 
Sbjct: 302 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD 352



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 175/368 (47%), Gaps = 4/368 (1%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D C+  EQ   +G     I++ TLI   +K+ + D   ++   ML     P   T  +++
Sbjct: 196 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 255

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK   +    +++ ++  + C P + + TSL+   + + R EE   +L  M  +   
Sbjct: 256 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 315

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++        +  A  V++ M+++G + ++  Y T I  + + G +E A  +
Sbjct: 316 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 375

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++ M  +G+ P    +N L++G  K +R++++    ++M++  + P+   FN ++  L +
Sbjct: 376 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 435

Query: 246 CGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
            G   +A  +    L+K    P  ++Y+ LI G  K G + E    + EM  + I P   
Sbjct: 436 DGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECH 495

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YTSLI SL + G++ EA K  + M    + P V  Y +L+   ++      A  + +EM
Sbjct: 496 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 555

Query: 365 VSEGLKPS 372
           +  G  P+
Sbjct: 556 MKRGCAPN 563



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 36/395 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+  G S +++++  +I  + K+ R +   + ++ M  +   P   T   +I  LCK   
Sbjct: 134 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQM 193

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     + +++  K C P  I  T+LI    +  +++E   LL  ML K      + Y  
Sbjct: 194 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 253

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           IV+   K+  +  A  V  +M +RG     F++T+ +  Y   G+ EEA  ++ EM   G
Sbjct: 254 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 313

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    +  LI+      R+ E+    + M+ +   P    +  +I+   + GN + A 
Sbjct: 314 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 373

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYA---------------------------------- 279
            +L L    G  P+   Y+ L+ GY                                   
Sbjct: 374 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 433

Query: 280 -KEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            K+G+      L+ EM E + + PTL +YT LI  L + G++ EA   F+ M    ++P 
Sbjct: 434 FKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPE 493

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              Y SL+    + G   +A  L E+MV  G+ P 
Sbjct: 494 CHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 528



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 169/389 (43%), Gaps = 33/389 (8%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
             G    +I+F TLIH   K+ +  +  ++    L+  R P+     ++I   CK G L 
Sbjct: 35  DNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFR-PDVFLYTSVIHGYCKAGDLD 93

Query: 76  T--------------------------------YVDMLDRIHGKRCSPMVIVNTSLILRI 103
           T                                  ++ + +    CSP V+  T++I  +
Sbjct: 94  TGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGL 153

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           ++  RIE+G+   + M   + +     Y++++    K + L  A  V+E+M+++G   ++
Sbjct: 154 LKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDT 213

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             YTT I  + +  K++EA  L+  M   G +P   T+  ++ G  K   I E+     Q
Sbjct: 214 ITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQ 273

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M  R   P    F  ++      G A++A  +LT    +G +P+ I Y+ LI      G 
Sbjct: 274 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 333

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           + E   ++  M  K  +P    Y ++I +  + G +E A +  ++M    + P    Y S
Sbjct: 334 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 393

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+  +++     +A  + + MV+ G+KP+
Sbjct: 394 LMDGYVKLERVDQAFGVYDRMVASGIKPN 422



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/354 (21%), Positives = 157/354 (44%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           SL +IS+ T+I  +  S R D    +++ +      PN      +I  L K G+++  + 
Sbjct: 105 SLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 164

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
             + + G  C P     T +I  + + + + +   + ++M++K  + DTI Y+ ++    
Sbjct: 165 NFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 224

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   ++ A  + + ML +G    +  Y + +  +C+   I EA  ++ +M   G +P   
Sbjct: 225 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLF 284

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            F  L+       R EE+     +M +R   P    +  +I  L   G   +A  +    
Sbjct: 285 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 344

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           ++KG +P+ +TY  +I  ++K G ++   ++   M    + P   AY SL+    +  ++
Sbjct: 345 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERV 404

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++A   +  M +  + P    +  L+    + G   +A  L +EM+ +   P T
Sbjct: 405 DQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPT 458



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 1/279 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A+ V   +  RG +  +I + +LI ++  + R      ++  M+E    P+  T  T+
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I    K G ++   ++L+ +      P      SL+   ++ ER+++   +  RM+   +
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV-YTTFIGAYCEYGKIEEAN 183
             + + ++++++   K    + A  +++EML++     + V YT  I    + G++ EA 
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
              QEM + G+ P   T+  LI   AKA RI E+    E M+   + P   A++ +I  L
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            +      A  +    + +G +PNE+TY  L  G+   G
Sbjct: 540 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 5/184 (2%)

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   ++N +I G A   +++E+  +   M+     P   AF  +I   C+ G  +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           + +L  AL K F P+   Y+ +I GY K G++      Y+       S  + +YT++I  
Sbjct: 62  HKLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKG 117

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L    +++EA + F+ +K+    P V  Y +++   L+ G     L   EEM      P+
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 373 -TSY 375
            T+Y
Sbjct: 178 RTTY 181


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 9/318 (2%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T+  L++ L +  +    + + D I      P + + ++++  + + +   +   +
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  M         + Y+++++   K R +  AL +   ++++G  AN   Y         
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY--------- 204

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           YGK  EA  L +EM   GL     T+++LI+   +   ++ ++ + ++M    +  +   
Sbjct: 205 YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I   C+ GNA  A       +DKG +P  +TY+ LI GY  EGE  +  K+Y EM 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K ISP    +T++IS LC+   + EA + F  MK   ++P    Y  ++  H   GN +
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 356 KALHLCEEMVSEGLKPST 373
           +A HL +EMV +G  P T
Sbjct: 385 EAFHLLDEMVGKGFVPDT 402



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 163/367 (44%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   +  +G S +  +F  +I  + +++      R++  M E    P+E T   +I 
Sbjct: 316 AFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIE 375

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G +     +LD + GK   P       LI  +    R+ E    +  + + +   
Sbjct: 376 GHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKL 435

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + YS +V+   K    + A+     M++RG + +   Y   I              L+
Sbjct: 436 NNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLL 495

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM N GL+P    +  +I+  +KA  ++E+    + M+    LP+   +  +I  LC+ 
Sbjct: 496 KEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKA 555

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +    L    +PN ITY   +    + G +++ ++L++ M  K    T  +Y
Sbjct: 556 GLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSY 614

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI   C+ GK+EEA K    M  + ++P    Y +++    ++ N  +A+ L   M+ 
Sbjct: 615 NILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLD 674

Query: 367 EGLKPST 373
           +GLKP T
Sbjct: 675 KGLKPDT 681



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/402 (22%), Positives = 160/402 (39%), Gaps = 32/402 (7%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---------------- 44
           ++ F  A ++  ++E     LS++ +N LIH + KS R   +W                 
Sbjct: 144 LKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRR---IWEALEIKNCLMQKGLEAN 200

Query: 45  -------------IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSP 91
                        +++ M E     N  T   LI + C+ G++   +  LD++       
Sbjct: 201 VVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEF 260

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
            V    SLI    +             M+ K +    + Y+ ++           A  VY
Sbjct: 261 TVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVY 320

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM  +G S N++ +T  I   C    + EA  L  EM+   + P + T+N++IEG  ++
Sbjct: 321 NEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRS 380

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             I E+    ++M+ +  +P    +  +I  LC  G   +A   +          N + Y
Sbjct: 381 GNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCY 440

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           S L+ GY KEG  ++ +     M  + ++  L  Y  LI    +           K M +
Sbjct: 441 SALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHN 500

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           H L P   IY +++  H + GN  +A  L + MV EG  P+ 
Sbjct: 501 HGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNV 542



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 165/359 (45%), Gaps = 1/359 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++R    S +++N +I    +S      + +   M+     P+  T R LIS LC  G+
Sbjct: 358 MKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGR 417

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    + +D +H        +  ++L+    +E R ++ +   + M+ + +  D + Y++
Sbjct: 418 VSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAI 477

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +  +  +   + +EM   G   ++ +YT  I  + + G ++EA  L   M + G
Sbjct: 478 LIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEG 537

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+  LI G  KA  ++++    ++ +   + P+   +   +  L   GN ++A 
Sbjct: 538 CLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKA- 596

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             L  A+ KGF    ++Y+ LI G+ + G+I+E  KL + M    I P    Y+++I   
Sbjct: 597 VQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQ 656

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+   L+EA K +  M    L P    Y  LV      G   KA  L +EM+  G++ +
Sbjct: 657 CKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSN 715



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 1/267 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A   CR + +RG ++ L+ +  LI    +      ++ + + M  +   P+      
Sbjct: 453 FKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTN 512

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I    K G L+    + D +  + C P V+  T+LI  + +   +++  +L K  L  +
Sbjct: 513 MIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSD 572

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I Y   +    +  N+E A+ ++  MLK GF A +  Y   I  +C  GKIEEA 
Sbjct: 573 VTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEAT 631

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  M +  + P   T++ +I    K   ++E++     M+ + L P   A++ ++   
Sbjct: 632 KLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGC 691

Query: 244 CECGNAKQANGMLTLALDKGFSPNEIT 270
           C  G  ++A  +    + +G   N +T
Sbjct: 692 CIAGELEKAFELRDEMIRRGMRSNHVT 718


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 169/350 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++NTLI  +    R      +   ML     P+  T   L+ A CK    +  + +LD +
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 217

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K C+P +I    ++  I QE R+++ +  LK +       +T++Y++++         
Sbjct: 218 RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERW 277

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  +  EM ++G+  N   +   I   C  G +E A  ++ ++   G  P   ++N +
Sbjct: 278 EDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +    K K+++ ++++ E M+SR   P   ++N ++  LC  G    A  +L    DKG 
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P  I+Y+ +I G  K G+ +E L+L  EM  K + P +  Y+++ S LC+  ++EEA +
Sbjct: 398 TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIR 457

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            F  ++   + P   +Y +++    ++     A+ L   M+S G  P+ S
Sbjct: 458 AFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNES 507



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 152/332 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ A  +   +  +G +  +I++N +++ + +  R D      + +  +   PN  +   
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++  LC   + +    ++  +  K   P V+    LI  + +   +E  M +L ++ +  
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              ++++Y+ I++A  K + ++ A+   E M+ RG   +   Y T + A C  G+++ A 
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ ++++ G  P   ++N +I+G  KA + +E+L    +M+++ L P    ++ +   L
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     ++A        D G  PN + Y+ ++ G  K  E    + L+  M      P  
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
             YT LI  L   G ++EA +    + S  +V
Sbjct: 507 STYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 113/228 (49%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A +V   + + G + + +S+N ++H   K  + D      + M+    YP+  +  
Sbjct: 311 LVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYN 370

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALC+GG++   V++L ++  K C+P++I   ++I  + +  + +E + LL  M+ K
Sbjct: 371 TLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTK 430

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS I     +   +E A+  + ++   G   N+ +Y   +   C+  +   A
Sbjct: 431 GLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNA 490

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             L   M + G  P + T+ +LIEG      ++E+     ++ SR ++
Sbjct: 491 IDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 3/212 (1%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y   +  YC  G+++ A  L+ +M    ++P   T+N LI G     R   +L   
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVL 179

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + M+ R  +P    +  ++   C+    KQA  +L     KG +P+ ITY+ ++ G  +E
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE 239

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + + ++    +      P   +Y  ++  LC   + E+A+K    M      P V  +
Sbjct: 240 GRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     +G    A+ + +++   G  P++
Sbjct: 300 NMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 164/357 (45%), Gaps = 5/357 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q G S    +  + I    +S   D  +R+++ M       NE +   LI  LC+ G++ 
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V +  R+    C P V   T+LI + +  + + + M LL  ML +N++ D I Y+ ++
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALI-KGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
             + +  +L+SA  +   M +RG   +   Y  FI   C+  ++EEA  L   +   G+ 
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +++LI+G  K  +++E+    E+M+S+   P+   FN +I  LC  GN K+A  +
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  P   T++ LIG   K+G+  +  K   +M      P    Y + I   C 
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA+     MK   + P    Y SL+  + + G    A  + + M     +PS
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPS 571



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 168/364 (46%), Gaps = 6/364 (1%)

Query: 9   DVCRYLEQRGFS-LSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           D+CR + +   + LSL  +N L+ ++ +    D + ++Y  MLE     +  T   +I+ 
Sbjct: 142 DICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINV 201

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK G ++     + ++     SP    +TS IL   + + ++    + + M  +N    
Sbjct: 202 YCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN---- 257

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            ++Y+ +++   +   ++ A+ ++  M       N + YT  I   C    + +A  L+ 
Sbjct: 258 EVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLD 316

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM    L P   T+N LI G  +A  ++ +      M  R L+P    +   I  LC+  
Sbjct: 317 EMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSN 376

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             ++A  +     ++G S N I YS LI GY K G++ E   L+ +M  K+ SP    + 
Sbjct: 377 RVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFN 436

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +LI  LC  G L+EA   F  M    L P V  +  L+G  L++G+   A    ++M+S 
Sbjct: 437 ALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSS 496

Query: 368 GLKP 371
           G KP
Sbjct: 497 GEKP 500



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/385 (22%), Positives = 163/385 (42%), Gaps = 29/385 (7%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R     LI++N+LI    ++   D  +R+   M E    P++ T    I  LCK  +++
Sbjct: 320 ERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVE 379

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + D +  +  S  VI+ + LI    +  +++E   L ++ML KN   +   ++ ++
Sbjct: 380 EARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALI 439

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +      NL+ AL ++++M+K G     + +   IG   + G  ++A+  +Q+M ++G K
Sbjct: 440 HGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEK 499

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N  IE    A +++E+     QM    + P    +  +I+   + G    A  +
Sbjct: 500 PVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDV 559

Query: 256 LTLALDKGFSPNEITYSHLI-----------------------------GGYAKEGEIQE 286
           L    D    P+  T+  LI                                 K  E   
Sbjct: 560 LKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDI 619

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
           V++L+ EME    +P    Y  LIS +C+   L  A K    M+   + P   ++ +++ 
Sbjct: 620 VIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVIS 679

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKP 371
              +     +A ++ E+M+  G  P
Sbjct: 680 CCCKLQKYGEAANIVEDMICSGHSP 704



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 32/296 (10%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           ++E   L   ML + +  D   ++L++    KM  ++ A     +M++ G S + F  T+
Sbjct: 173 VDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTS 232

Query: 169 FIGAY-------------------------------CEYGKIEEANCLMQEMENAGLKPY 197
           FI  Y                               CE G+I+EA  L   M++    P 
Sbjct: 233 FILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPN 292

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  + K + +++   ++M+ R L+P    +N +I   C  G+   A  +L+
Sbjct: 293 VYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLS 351

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           L  ++G  P++ TY   I    K   ++E  +L+  +  + +S  +  Y+ LI   C+ G
Sbjct: 352 LMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVG 411

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K++EA   F+ M S +  P    + +L+      GN  +AL L ++MV  GLKP+ 
Sbjct: 412 KVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTV 467



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 29/325 (8%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++ +FN LI  + K    D   +  Q M+ +   P   T    I   C  G++Q  
Sbjct: 462 GLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEA 521

Query: 78  VDMLDRIHGKRCSPMVIVNTSLI---------------LRIIQEERIEEG----MVLLKR 118
            DM+ ++  +   P     TSLI               L+ + +   E      + L+K+
Sbjct: 522 EDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQ 581

Query: 119 MLRKNMI----HDTIAYSLIVYAKV------KMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +  K  +     +T   S+  +  V      KM   +  + ++EEM K G + +S  Y  
Sbjct: 582 LFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEK 641

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C+   +  A  L+ +M+  G+ P +  FN +I  C K ++  E+ +  E M+   
Sbjct: 642 LISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSG 701

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P       +I  L E G  ++ N +       G++ +EI +  LI G  K+G ++E  
Sbjct: 702 HSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFS 761

Query: 289 KLYYEMEYKSISPTLPAYTSLISSL 313
           +L+ EME    + +   Y+ L   L
Sbjct: 762 QLFEEMEKNGCNFSPRTYSILTQKL 786



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/383 (19%), Positives = 141/383 (36%), Gaps = 64/383 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + G S ++I ++ LI    K  + D    +++ ML     PN  T   LI  LC  G 
Sbjct: 388 LTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGN 447

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML------------- 120
           L+  + + D++      P V     LI R++++   ++    L++M+             
Sbjct: 448 LKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNA 507

Query: 121 ----------------------RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
                                  + +  D   Y+ ++ A  K+    SA  V + M    
Sbjct: 508 FIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDAD 567

Query: 159 FSANSFVYTTFIG------------------AYCEYGKIEEANC-----------LMQEM 189
              +   + + I                   +   +G +  +N            L +EM
Sbjct: 568 CEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEM 627

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E  G  P  + +  LI G  K + +  +L   +QM    + PS   FN +I   C+    
Sbjct: 628 EKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKY 687

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  ++   +  G SP       LI G  +EGE +    ++ ++     +    A+  L
Sbjct: 688 GEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKIL 747

Query: 310 ISSLCQCGKLEEADKYFKIMKSH 332
           I  + + G +EE  + F+ M+ +
Sbjct: 748 IDGMLKQGLVEEFSQLFEEMEKN 770



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 32/172 (18%)

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           S   +NE++  L   G   + N + T  L++  S +  T++ +I  Y K G ++E  +  
Sbjct: 156 SLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFM 215

Query: 292 YEMEYKSISPT--------------------------LP-----AYTSLISSLCQCGKLE 320
            +M    +SP                           +P     +Y  LI  LC+ G+++
Sbjct: 216 CKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRID 275

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA   F  MK     P V  Y +L+   L + N  KA+ L +EM+   L P 
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIK-GLCRKNVHKAMGLLDEMLERNLVPD 326



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 8/173 (4%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F++  ++   +E+ G +     +  LI  + K +   +  ++   M +    P+E  
Sbjct: 614 MMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMV 673

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRC---SPMVIVNTSLILRIIQEERIEEGMVLLK 117
              +IS  CK   LQ Y +  + +    C   SP +    +LI  + +E   E G  + K
Sbjct: 674 FNAVISCCCK---LQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFK 730

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG--FSANSFVYTT 168
           ++       D IA+ +++   +K   +E    ++EEM K G  FS  ++   T
Sbjct: 731 KLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILT 783


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 176/369 (47%), Gaps = 7/369 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + +E+ G   ++ ++  LI  +    + +    +   MLE    PN  T   LI+
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ---EERIEEGMVLLKRMLRKN 123
             CK G ++  VD+++ +  ++ SP    NT     +I+   +  + + M +L +ML + 
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSP----NTRTYNELIKGYCKSNVHKAMGVLNKMLERK 457

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D + Y+ ++  + +  N +SA  +   M  RG   + + YT+ I + C+  ++EEA 
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   +E  G+ P    +  LI+G  KA +++E+    E+M+S+  LP+   FN +I  L
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G  K+A  +    +  G  P   T + LI    K+G+       + +M      P  
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT+ I + C+ G+L +A+     M+ + + P +  Y SL+  + + G    A  + + 
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697

Query: 364 MVSEGLKPS 372
           M   G +PS
Sbjct: 698 MRDTGCEPS 706



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 186/407 (45%), Gaps = 41/407 (10%)

Query: 7   AFDVCRYLEQR-----GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
             D+CR + +       + L +  +NTL++ + +    D + ++Y  MLE+   PN  T 
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +++  CK G ++     + +I      P     TSLI+   Q + ++    +   M  
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281

Query: 122 KNMIHDTIAYSLIVYAK-------------VKMRNLE----------------------S 146
           K    + +AY+ +++               VKM++ E                       
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL + +EM + G   N   YT  I + C   K E+A  L+ +M   GL P   T+N LI 
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K   IE+++   E M SRKL P+   +NE+I+  C+  N  +A G+L   L++   P
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLP 460

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + +TY+ LI G  + G      +L   M  + + P    YTS+I SLC+  ++EEA   F
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             ++   + P V +Y +L+  + + G   +A  + E+M+S+   P++
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + AF V   +  +G   + +++  LIH +  + R D    ++  M ++  +P   T   
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI +LC   +    ++++  +      P +   T LI  +  + + E+   LL +ML K 
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + I Y+ ++    K   +E A+ V E M  R  S N+  Y   I  YC+   + +A 
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAM 447

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ +M    + P   T+N LI+G  ++   + +      M  R L+P    +  MI  L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+    ++A  +      KG +PN + Y+ LI GY K G++ E   +  +M  K+  P  
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             + +LI  LC  GKL+EA    + M    L P V     L+   L+ G+   A    ++
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627

Query: 364 MVSEGLKPST 373
           M+S G KP  
Sbjct: 628 MLSSGTKPDA 637



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 165/389 (42%), Gaps = 20/389 (5%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A DV   +E R  S +  ++N LI    KS+ +  +  +   MLE    P+  T  
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYN 466

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +LI   C+ G   +   +L  ++ +   P     TS+I  + + +R+EE   L   + +K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + Y+ ++    K   ++ A ++ E+ML +    NS  +   I   C  GK++EA
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L ++M   GL+P   T  +LI    K    + + S  +QM+S    P    +   I+ 
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C  G    A  M+    + G SP+  TYS LI GY   G+      +   M      P+
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706

Query: 303 LPAYTSLI---------------SSLCQCGKLEEADKYFKI---MKSHSLVPGVDIYESL 344
              + SLI                 LC    + E D   ++   M  HS+ P    YE L
Sbjct: 707 QHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766

Query: 345 VGIHLEKGNKAKALHLCEEMV-SEGLKPS 372
           +    E GN   A  + + M  +EG+ PS
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEGISPS 795



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 19/312 (6%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++ +   LIH + K    D  +  +Q ML +   P+  T  T I   C+ G+L   
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML------RKNMIHDTIAY 131
            DM+ ++     SP +   +SLI       +      +LKRM        ++     I +
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716

Query: 132 SL-IVYAKVK-----------MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            L + Y K K           M   ++ + + E+M++   + N+  Y   I   CE G +
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776

Query: 180 EEANCLMQEME-NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
             A  +   M+ N G+ P +  FN L+  C K K+  E+    + M+    LP   +   
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  L + G  ++   +    L  G+  +E+ +  +I G  K+G ++   +L+  ME   
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896

Query: 299 ISPTLPAYTSLI 310
              +   Y+ LI
Sbjct: 897 CKFSSQTYSLLI 908


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 1/353 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+A DV    ++ GF  ++ +++ ++    +S R     +++Q M +    PN  T  T+
Sbjct: 217 EIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTI 276

Query: 65  ISALCKGG-QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           I A  KGG  L+  +D+ D +  +   P  I   SLI    +    E+   +   M R+ 
Sbjct: 277 IDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRG 336

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   ++ ++ A  K   +E A  +   M  +  S N   Y+T I  Y + G  EEA 
Sbjct: 337 IEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAI 396

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M+ +G++P   ++N LI+  AK  R +++L  C+ M    L      +N +I   
Sbjct: 397 SLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAY 456

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  K A  +      +G  PN +TYS LI  Y+K G  Q+V  ++ E +   + P +
Sbjct: 457 GKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDV 516

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             Y+SLI S C+CG +E+A    + M    + P +  Y SL+  +   G   K
Sbjct: 517 VLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADK 569



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 7/302 (2%)

Query: 74  LQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           LQ Y  M+ ++H +   S +  +  S + R+    ++E  + +  R  +    ++  AYS
Sbjct: 183 LQGYEWMVQQVHLRSEWSKLASIMISTLGRL---GKVEIALDVFNRAQKAGFGNNVYAYS 239

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE--EANCLMQEME 190
            +V A  +      AL V++ M K G   N   Y T I A C  G ++  +A  +  EM+
Sbjct: 240 AMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDA-CGKGGVDLKQALDIFDEMQ 298

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G++P   TFN LI  C++    E+S     +M  R +      FN +I  +C+ G  +
Sbjct: 299 KEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQME 358

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  ++T    K  SPN +TYS +I GY K G  +E + LY++M+   + P   +Y +LI
Sbjct: 359 LAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLI 418

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
               + G+ ++A    K M+   L   V  Y +L+  + ++G    A  L ++M  EGL 
Sbjct: 419 DIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLV 478

Query: 371 PS 372
           P+
Sbjct: 479 PN 480



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 151/330 (45%), Gaps = 3/330 (0%)

Query: 46  YQHMLENIRYPNEAT--IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           Y+ M++ +   +E +     +IS L + G+++  +D+ +R         V   ++++   
Sbjct: 186 YEWMVQQVHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAY 245

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR-NLESALVVYEEMLKRGFSAN 162
            +  R  E + + + M +     + I Y+ I+ A  K   +L+ AL +++EM K G   +
Sbjct: 246 GRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPD 305

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              + + I      G  E++  +  EM+  G++    TFN LI+   K  ++E + S   
Sbjct: 306 RITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMT 365

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            M  + + P+   ++ MI    + G  ++A  +     + G  P+ ++Y+ LI  YAK G
Sbjct: 366 TMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLG 425

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
              + L    +ME   +   +  Y +LI +  + GK ++A   F  MK   LVP V  Y 
Sbjct: 426 RFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYS 485

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+  + + G      ++  E    GLKP 
Sbjct: 486 ALIDSYSKAGMHQDVSNVFTEFKRAGLKPD 515



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 153/369 (41%), Gaps = 76/369 (20%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L+E +  V   +++RG    + +FNTLI  V                             
Sbjct: 321 LWEDSQRVFAEMQRRGIEQDIFTFNTLIDAV----------------------------- 351

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
                 CKGGQ++    ++  + GK  SP V+  +++I    +    EE + L   M   
Sbjct: 352 ------CKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKES 405

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D ++Y+ ++    K+   + AL+  ++M + G  A+   Y   I AY + GK ++A
Sbjct: 406 GVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 465

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            CL  +M+  GL P   T++ LI+  +KA   ++  +   +     L P    ++ +I  
Sbjct: 466 ACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDS 525

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE--------------IQEV- 287
            C+CG  + A  +L      G  PN +TY+ LI  Y + G+              +Q++ 
Sbjct: 526 CCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIG 585

Query: 288 --------------------------LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                                     + +++EM+   + P +  +++++++  +C  L+E
Sbjct: 586 ERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQE 645

Query: 322 ADKYFKIMK 330
           A    + M+
Sbjct: 646 ASVLLEQMR 654



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/366 (21%), Positives = 142/366 (38%), Gaps = 76/366 (20%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +++ G     I+FN+LI V ++    +   R++  M       +  T  TLI 
Sbjct: 290 ALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLID 349

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A+CKGGQ++    ++  + GK  SP V+  +++I    +    EE + L   M    +  
Sbjct: 350 AVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRP 409

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y+ ++    K+   + AL+  ++M + G  A+   Y   I AY + GK ++A CL 
Sbjct: 410 DRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLF 469

Query: 187 QEMEN-----------------------------------AGLKPYDETFNLLIEGCAKA 211
            +M+                                    AGLKP    ++ LI+ C K 
Sbjct: 470 DKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKC 529

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG------------------------ 247
             +E+++   ++M    + P+   +N +I      G                        
Sbjct: 530 GLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSM 589

Query: 248 -----------NAKQANGMLTLA------LDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
                      NA    G+L            G  PN +T+S ++   ++   +QE   L
Sbjct: 590 EVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVL 649

Query: 291 YYEMEY 296
             +M +
Sbjct: 650 LEQMRF 655


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 172/352 (48%), Gaps = 4/352 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N L+ V+  + R +   +++  M      P+  T   LI   C  G+L+  V +LD +
Sbjct: 264 SYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDM 320

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P   V TS++  +  + R+ + + +++ M+   +I D   Y+ ++       +L
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            SA   ++EM ++G + +   YTT I   C  G+++EA  ++QEM    L   + T+ +L
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVL 440

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++G  K  ++ E+      M+ R + P+   +  +   LC+ G+ + AN +L    +KG 
Sbjct: 441 VDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             N  TY+ LI G  K G + + ++   +M+   + P +  YT+LI +LC+ G+L+ A  
Sbjct: 501 ELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHD 560

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP-STSY 375
             + M  + + P +  Y  L+      G       L E M+ + + P +T+Y
Sbjct: 561 LLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTY 612



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 167/358 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG   +   + +++ ++    R      + + M+ +    +EA   T++S  C  G L +
Sbjct: 323 RGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVS 382

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
                D +  K  +   +  T+LI  + +   ++E   +L+ ML + +  D + Y+++V 
Sbjct: 383 ARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVD 442

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +  A  V+  M++RG + N   YT      C+ G ++ AN L+ EM N GL+ 
Sbjct: 443 GYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL 502

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI G  KA  +++++     M +  L P    +  +I  LC+ G   +A+ +L
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              LD G  P  +TY+ L+ G+   G ++   KL   M  K+I P    Y SL+   C  
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             ++   + +K M S ++ P  + Y  L+  H +  +  +A +   EM+ +G + + S
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTAS 680



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 168/352 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++G +   +++ TLI+ + ++       ++ Q ML      +E T   L+   CK G+
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGK 449

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     + + +  +  +P V+  T+L   + ++  ++    LL  M  K +  +   Y+ 
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L+ A+    +M   G   + + YTT I A C+ G+++ A+ L+QEM + G
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+N+L+ G   + R+E      E M+ + + P+ + +N ++++ C   N K   
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTT 629

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +   PNE TY+ LI G+ K   ++E    + EM  K    T  +Y++LI  L
Sbjct: 630 EIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            +  K  EA K F  M+        D+Y   +  +  + N    L LC+E+V
Sbjct: 690 NKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELV 741



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 97/233 (41%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A ++   +  +G  L+  ++N+LI+ + K+   D   R    M      P+  T  TL
Sbjct: 486 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTL 545

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I ALCK G+L    D+L  +      P ++    L+       R+E G  LL+ ML KN+
Sbjct: 546 IDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNI 605

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   Y+ ++       N++S   +Y+ M  R    N   Y   I  +C+   ++EA  
Sbjct: 606 HPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQY 665

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
              EM   G +    +++ LI    K K+  E+      M           +N
Sbjct: 666 FHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 79/191 (41%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A D+ + +   G   +++++N L++    S R +   ++ + MLE   +PN  T  +
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   C G  +++  ++   +  +   P       LI    +   ++E       M+ K 
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                 +YS ++    K +    A  ++ +M K GF+A   VY  +I        +E   
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATL 734

Query: 184 CLMQEMENAGL 194
            L  E+  A +
Sbjct: 735 ALCDELVEASI 745


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 183/414 (44%), Gaps = 47/414 (11%)

Query: 7   AFDVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           A D+ R +E+    + +++ ++ +I  + K  R+     ++  M E   +P+  T  ++I
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C  G+      +L  +  ++ SP V+   +LI   ++E +  E   L   ML + +I
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +TI YS ++    K   L++A  ++  M  +G S N   + T I  YC   +I++   L
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM   GL     T+N LI G      +  +L   ++M+S  L P     + ++  LC+
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 246 CGNAKQANGMLTL------ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            G  K A  M  +       LD      G  P+  TY+ LI G   EG+  E  +LY EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV--------- 345
            ++ I P    Y+S+I  LC+  +L+EA + F  M S S  P V  + +L+         
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 346 --GIHL------------------------EKGNKAKALHLCEEMVSEGLKPST 373
             G+ L                        + GN   AL + +EM+S G+ P T
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 12/344 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S  ++++N LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M   +  K CSP +I   +LI      +RI++GM LL  M    ++ DT  Y+ ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + +EM+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P  +T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGI 347
            Y +LI    + G +  A   F+ M S  + P  + I   L G+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 47/403 (11%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +++FNTL+H +   DR      ++  M E    PN  T  TL++ LC+ G++   
Sbjct: 144 GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYSLIVY 136
           V +LDR+      P  I   +++  + +       + LL++M    ++I + + YS I+ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIID 263

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           +  K      A  ++ EM ++G   + F Y + I  +C  G+  +A  L+QEM    + P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI    K  +  E+    ++M+ R ++P+   ++ MI   C+      A  M 
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 257 TLALDKGFSPNEITYSHLIGGY--AKE--------------------------------- 281
            L   KG SPN IT++ LI GY  AK                                  
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK--------SH- 332
           G++   L L  EM    + P +    +L+  LC  GKL++A + FK+M+        SH 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 333 --SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              + P V  Y  L+   + +G   +A  L EEM   G+ P T
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEA 59
           R+ E    + R +E  G   + I++ T++  + K         + + M E I +  PN  
Sbjct: 199 RIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKIGDTVSALDLLRKM-EEISHIIPNVV 256

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I +LCK G+     ++   +  K   P +    S+I+      R  +   LL+ M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + Y+ ++ A VK      A  +Y+EML RG   N+  Y++ I  +C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE----------------------- 216
           + A  +   M   G  P   TFN LI+G   AKRI++                       
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 217 ------------SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL------ 258
                       +L   ++M+S  L P     + ++  LC+ G  K A  M  +      
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 259 ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I  L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+  +L+EA + F  M S S  P V  + +L+  + + G     L L  EM   G+
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 157/354 (44%), Gaps = 1/354 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F  L+ VV + +R DLV  +YQ M       +  +   LI   C   +L   +   
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 137

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P V+   +L+  +  E+R+ E + L  +M       + + ++ ++    + 
Sbjct: 138 GKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN-AGLKPYDET 200
             +  A+ + + M++ G       Y T +   C+ G    A  L+++ME  + + P    
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVI 257

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I+   K  R  ++ +   +M  + + P    +N MI   C  G    A  +L   L
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  SP+ +TY+ LI  + KEG+  E  +LY EM  + I P    Y+S+I   C+  +L+
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            A+  F +M +    P +  + +L+  +         + L  EM   GL   T+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 1/301 (0%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  +D+   +   R  P V+    L+  +++ ER +  + L ++M RK +  D  ++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        L  AL  + ++ K G   +   + T +   C   ++ EA  L  +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   TF  L+ G  +  RI E+++  ++MM   L P+   +  ++  +C+ G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +L  +       PN + YS +I    K+G   +   L+ EM+ K I P L  Y S+I  
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G+  +A++  + M    + P V  Y +L+   +++G   +A  L +EM+  G+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 373 T 373
           T
Sbjct: 360 T 360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 11/254 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G      ++NTLIH        +    + Q M+ +   P+  T  TL+  LC  G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 74  LQTYVDM----------LDRIHG-KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L+  ++M          LD  H      P V     LI  +I E +  E   L + M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ DTI YS ++    K   L+ A  +++ M  + FS N   +TT I  YC+ G++++ 
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM   G+     T+  LI G  K   I  +L   ++M+S  + P       M+  
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 243 LCECGNAKQANGML 256
           L      K+A  ML
Sbjct: 661 LWSKEELKRAVAML 674



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 11/293 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S +LI+FNTLI     + R D    +   M E     +  T  TLI      G 
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-----------K 122
           L   +D+L  +      P ++   +L+  +    ++++ + + K M +            
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++   +       A  +YEEM  RG   ++  Y++ I   C+  +++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +   M +    P   TF  LI G  KA R+++ L    +M  R ++ +   +  +I  
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
             + GN   A  +    +  G  P+ IT  +++ G   + E++  + +  +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 183/403 (45%), Gaps = 54/403 (13%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL---------IS 66
            +GF      FN L+  V  S   +  W  +          NE+ I+ +         I 
Sbjct: 122 DKGFVPGSNCFNNLLTFVVGSSSFNQWWCFF----------NESKIKVVLDVYSFGIVIK 171

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+++   D+L  +     SP V++ T+LI    ++  IE+   L   M +  ++ 
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231

Query: 127 DTIAYSLIVYA----KVKMRNLE-------------------------------SALVVY 151
           +   Y+++++      +K +  E                                A  V+
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVF 291

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           +EM +RG S N   Y T IG  C   K  EAN +M +M++ G+ P   T+N LI+G    
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           +++ ++LS C  + SR L PS   +N ++   C+ G+   A  ++    ++G  P+++TY
Sbjct: 352 RKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTY 411

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI  +A+   +++ ++L   ME   ++P +  Y+ LI   C  G++ EA + FK M  
Sbjct: 412 TILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVE 471

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
               P   IY ++V  + ++G+  +AL L  EM  + L P+ +
Sbjct: 472 KKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 178/369 (48%), Gaps = 8/369 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A D+   + + G   +  ++  LIH + K+      + +Y+ M E+  +PN  T   +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCV 274

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++ LCK G+ +    + D +  +  S  ++   +LI  + +E +  E   ++ +M    +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGI 334

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + I Y+ ++     +R L  AL +  ++  RG S +   Y   +  +C+ G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++EME  G+KP   T+ +LI+  A++  +E+++     M    L P    ++ +I   C
Sbjct: 395 VVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFC 454

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A+ +    ++K F PNE+ Y+ ++ GY KEG     L+L+ EME K + P + 
Sbjct: 455 IKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE- 363
           +Y  +I  LC+  K +EA+   + M    + P     +S++ +     N + +  + EE 
Sbjct: 515 SYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS----DSILNLISRAKNDSHSRSMDEEE 570

Query: 364 ---MVSEGL 369
              MV +GL
Sbjct: 571 PASMVFDGL 579



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 167/372 (44%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E +FD+   L + GFS +++ + TLI    K    +    ++  M +     NE T   L
Sbjct: 180 EKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVL 239

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K G  +   +M +++      P +     ++ ++ ++ R ++   +   M  + +
Sbjct: 240 IHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGV 299

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ ++    +      A  V ++M   G + N   Y T I  +C   K+ +A  
Sbjct: 300 SCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALS 359

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++++ GL P   T+N+L+ G  K      +    ++M  R + PS   +  +I    
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFA 419

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              N ++A  + +   + G +P+  TYS LI G+  +G + E  +L+  M  K   P   
Sbjct: 420 RSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEV 479

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +++   C+ G    A + F+ M+   L P V  Y  ++ +  ++    +A  L E+M
Sbjct: 480 IYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKM 539

Query: 365 VSEGLKPSTSYL 376
           +  G+ PS S L
Sbjct: 540 IDSGIGPSDSIL 551



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 34/276 (12%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANS--------------------------- 163
           Y +I+ A V+ ++L+S++  + EM+ +GF   S                           
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 164 -------FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
                  + +   I   CE G+IE++  L+ E+   G  P    +  LI+GC K   IE+
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +     +M    L+ +   +  +I  L + G  KQ   M     + G  PN  TY+ ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K+G  ++  K++ EM  + +S  +  Y +LI  LC+  K  EA++    MKS  + P
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINP 336

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  Y +L+          KAL LC ++ S GL PS
Sbjct: 337 NLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPS 372



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 1/207 (0%)

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           S +Y   I AY +   ++ +     EM + G  P    FN L+     +    +   +  
Sbjct: 94  SRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN 153

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +   + +L   S F  +I+  CE G  +++  +L    + GFSPN + Y+ LI G  K+G
Sbjct: 154 ESKIKVVLDVYS-FGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           EI++   L++EM    +      YT LI  L + G  ++  + ++ M+ H + P +  Y 
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYN 272

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGL 369
            ++    + G    A  + +EM   G+
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGV 299


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 182/416 (43%), Gaps = 45/416 (10%)

Query: 2   RLFEVAFDVCRYLE---------QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN 52
           R+  V  D  R+ +         Q G   S++++NTL+    K  RND V  + + M   
Sbjct: 207 RVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETR 266

Query: 53  IR--YPNEATIRTLISALCKGGQLQTYVDMLD--RIHGKRCS------------------ 90
                PN+ T   +I+ L + G L+   +M++  R+  K  S                  
Sbjct: 267 GSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKK 326

Query: 91  --------------PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
                         P V+   ++I  ++Q  ++E   V    M    +  D I Y+ ++ 
Sbjct: 327 ADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLN 386

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K  +L+ AL+++ ++   G +     Y   I  YC  G +EEA  L +EM   G  P
Sbjct: 387 GYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP 446

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +L++G   A  +  +  + ++M+S+ L P C A+N  IR     G   +A  + 
Sbjct: 447 DVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLR 506

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            + + +G S + +TY+ LI G  K G + +   L  +M +  + P    YT LI + C+ 
Sbjct: 507 EVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCER 566

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           G L EA K+FK M S  L P    Y   +  +  +GN   A     +M+ EG++P+
Sbjct: 567 GLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPN 622



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 169/378 (44%), Gaps = 2/378 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +E  G   +++++N +IH + +S + +     +  M      P+  T  +L++
Sbjct: 327 ADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLN 386

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G L+  + +   +     +P V+    LI    +   +EE   L + M+ +  + 
Sbjct: 387 GYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP 446

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++       +L  A   ++EML +G   + F Y T I A    G I +A  L 
Sbjct: 447 DVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLR 506

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G+     T+N+LI+G  K   + ++     +M+   L P C  +  +I   CE 
Sbjct: 507 EVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCER 566

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A       +  G +P+ +TY+  I  Y + G +      + +M  + + P    Y
Sbjct: 567 GLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 626

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI +LC+ G+ + A ++F  M    LVP    Y  L+  + ++GN   A+    EM  
Sbjct: 627 NVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQ 686

Query: 367 EGLKPSTSYLCSASTCRG 384
            G+ P   YL   +  +G
Sbjct: 687 NGIHP--DYLTHKALFKG 702



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 36/229 (15%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI  + +   + +   L  +M+   +  D I Y+ +++A  +   L  A   +++M+  G
Sbjct: 524 LIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDG 583

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            + ++  YT FI AYC  G +  A    ++M   G++P + T+N+LI    +  R + + 
Sbjct: 584 LAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAY 643

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            +  +M+ R L+P                                   N+ TY+ LI G 
Sbjct: 644 RHFHEMLERGLVP-----------------------------------NKYTYTLLIDGN 668

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            KEG  ++ ++ Y+EM    I P    + +L     + G +  A +Y +
Sbjct: 669 CKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDE-GHMNHAIEYLE 716



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 3/157 (1%)

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           LS   +M S  + P     N ++R L +         +    L  G  P+ +TY+ L+  
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 278 YAKEGEIQEVLKLYYEMEYKSIS--PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
           + KEG   +V  L  EME +     P    +  +I+ L + G LEEA +  + M+     
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                Y  L+   L KG   KA  L  EM +EG+ P+
Sbjct: 307 SSF-TYNPLITGLLAKGFVKKADDLQLEMENEGIMPT 342


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 178/353 (50%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++FNTLI  + ++   + V  +   M E+   P+     T+I  +CK G L+   ++L
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+      P V+   +L+  +   ER EE   LL  M  K+   D + ++++V    + 
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++  + + E+ML  G   +   YTT I  +C+ G I+EA  L++ M   G KP   ++
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++++G   A+R  ++     QM+ +    +   FN +I  LC+ G  +QA  +L   L 
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ I+YS +I G  K G+  E L+L   M  K +SP    Y+S+ S+L + G++ +
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + F  ++  ++     +Y +++    ++G   +A+     MVS G  P+ S
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 137/309 (44%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++A+C  G +   + +L  +    C P V+   +++  +   +R      L++ M+R  
Sbjct: 198 VLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + ++ ++    +    E    V  +M + G + +  +Y T I   C+ G ++ A+
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAH 317

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M + GLKP    +N L++G   A+R EE+     +M  +        FN ++   
Sbjct: 318 EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 377

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +   +L   L  G  P+ ITY+ +I G+ KEG I E + L   M      P  
Sbjct: 378 CQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNT 437

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT ++  LC   +  +A+     M           + +L+    +KG   +A+ L ++
Sbjct: 438 ISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQ 497

Query: 364 MVSEGLKPS 372
           M+  G  P 
Sbjct: 498 MLVNGCSPD 506



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/330 (20%), Positives = 147/330 (44%), Gaps = 9/330 (2%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE-RIEEGMV 114
           P       ++ A C+GG  ++ V +L+ +H + C+ + + N +L+L  I ++  +++ + 
Sbjct: 155 PIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCA-LDVGNCNLVLNAICDQGSVDKALH 213

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL+ +       D ++Y+ ++      +       + EEM++     N   + T I   C
Sbjct: 214 LLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLC 273

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G  E  + ++ +M   G  P    +  +I+G  K   ++ +     +M S  L P+  
Sbjct: 274 RNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVV 333

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +++ LC     ++   +L    DK    +++T++ L+  + + G +  V++L  +M
Sbjct: 334 CYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 393

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                 P +  YT++I+  C+ G ++EA    K M +    P    Y  ++         
Sbjct: 394 LVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453

Query: 355 AKALHLCEEMVSEG--LKPST-----SYLC 377
             A  L  +M+ +G  L P T     ++LC
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLC 483



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 138/312 (44%), Gaps = 5/312 (1%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +++  C+ GQL++   +   +      P       ++  +    RI + + +L  M R+
Sbjct: 95  AMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 151

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y +I+ A  +     SA+ V E++  RG + +       + A C+ G +++A
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKA 211

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++++ + G +P   ++N +++G   AKR        E+M+     P+   FN +I  
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G  ++ + +L    + G +P+   Y+ +I G  KEG ++   ++   M    + P 
Sbjct: 272 LCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPN 331

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI-YESLVGIHLEKGNKAKALHLC 361
           +  Y +L+  LC   + EE ++    M      P  D+ +  LV    + G   + + L 
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDKD-CPLDDVTFNILVDFFCQNGLVDRVIELL 390

Query: 362 EEMVSEGLKPST 373
           E+M+  G  P  
Sbjct: 391 EQMLVHGCMPDV 402



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 3/243 (1%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ +V    +   LESA  +   +       N++ Y   + A C  G+I +A  ++ EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P    +++++E   +      ++   E + +R         N ++  +C+ G+  
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L      G  P+ ++Y+ ++ G         V +L  EM   +  P +  + +LI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S LC+ G  E   +    M  H   P + +Y +++    ++G+   A  +   M S GLK
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 371 PST 373
           P+ 
Sbjct: 330 PNV 332



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 104/213 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   + IS+  ++  +  ++R      +   M++     N  T  TLI+ LCK G ++  
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L ++    CSP +I  +++I  + +  + +E + LL  M+ K M  +TI YS I  A
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +   +   + +++ +      +++ +Y   I + C+ G+ E A   +  M ++G  P 
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           + T+ +LI G A    ++E+     ++ S+  L
Sbjct: 612 ESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 168/358 (46%), Gaps = 4/358 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G SL L +FN L+HV+ K        ++   +++    PN  T    I  LC+ G+L   
Sbjct: 211 GVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAA 270

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV-- 135
           V M+ R+  +   P V+    LI  + +  + +E  V L +++ + +  D+  Y+ ++  
Sbjct: 271 VRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAG 330

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           Y K  M  L   ++V    +  GF  + F Y + I   C  G+   A  L  E    G+K
Sbjct: 331 YCKGGMVQLAERILV--NAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N LI+G +    I E+     +M  + L+P    FN ++  LC+ G    A+G+
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           + + + KG+ P+  T++ LI GY+ + +++  L++   M    + P +  Y SL++ LC+
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCK 508

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             K E+  + +K M      P +  +  L+          KAL L EEM ++ + P  
Sbjct: 509 TSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDA 566



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 164/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++ S+N ++ ++  S   D   ++Y  M +    P+  +    + + C+  +    + +L
Sbjct: 110 TVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLL 169

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  + C   V+   +++    +E   +EG  L  +ML   +      ++ +++   K 
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKK 229

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +++    + ++++KRG   N F Y  FI   C+ G+++ A  ++  + + G KP   T+
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTY 289

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G  K  + +E+  Y  ++++  L P    +N +I   C+ G  + A  +L  A+ 
Sbjct: 290 NYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVF 349

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            GF P+E TY  LI G   EGE    L L+ E   K I P +  Y +LI  L   G + E
Sbjct: 350 NGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILE 409

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +    M    L+P V  +  LV    + G  + A  L + M+S+G  P 
Sbjct: 410 AAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 163/370 (44%), Gaps = 1/370 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L   G      ++NTLI    K     L  RI  + + N   P+E T R+LI  LC  G+
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + + +   GK   P VI+  +LI  +  +  I E   L   M  K +I +   +++
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    KM  +  A  + + M+ +G+  + F +   I  Y    K+E A  ++  M + G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N L+ G  K  + E+ +   + M+ +   P+   FN ++  LC      +A 
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKAL 551

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISS 312
           G+L    +K  +P+ +T+  LI G+ K G++     L+ +M E   +S + P Y  +I +
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHA 611

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +   +  A+K F+ M    L P    Y  +V    + GN         EM+  G  PS
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPS 671

Query: 373 TSYLCSASTC 382
            + L     C
Sbjct: 672 LTTLGRVINC 681



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 165/360 (45%), Gaps = 1/360 (0%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI-RYPNEATIRTLISALCKGGQ 73
           ++ GF  +L ++ ++I  +    + + +  +   M +N+  +  E      +    + G+
Sbjct: 32  KEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGK 91

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q  V++ +R+    C P V    +++  ++     ++   +  RM  + +  D  ++++
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            + +  +     +AL +   M  +G   N   Y T +G + E    +E   L  +M  +G
Sbjct: 152 RMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASG 211

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +     TFN L+    K   ++E     ++++ R +LP+   +N  I+ LC+ G    A 
Sbjct: 212 VSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAV 271

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M+   +D+G  P+ +TY++LI G  K  + QE      ++  + + P    Y +LI+  
Sbjct: 272 RMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGY 331

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G ++ A++       +  VP    Y SL+     +G   +AL L  E + +G+KP+ 
Sbjct: 332 CKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 118/255 (46%), Gaps = 1/255 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G+   + +FN LIH  +   + +    I   M++N   P+  T  +L++ LCK  + + 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            ++    +  K C+P +     L+  + +  ++++ + LL+ M  K++  D + +  ++ 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 137 AKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              K  +L+ A  ++ +M +    S ++  Y   I A+ E   +  A  L QEM +  L 
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ L+++G  K   ++    +  +MM    +PS +    +I  LC      +A G+
Sbjct: 635 PDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694

Query: 256 LTLALDKGFSPNEIT 270
           +   + KG  P  + 
Sbjct: 695 IHRMVQKGLVPEAVN 709



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 105/228 (46%), Gaps = 1/228 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   +   G    + ++N+L++ + K+ + + V   Y+ M+E    PN  T   L
Sbjct: 478 ENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNIL 537

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + +LC+  +L   + +L+ +  K  +P  +   +LI    +   ++    L ++M    M
Sbjct: 538 LESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYM 597

Query: 125 IH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +   T  Y++I++A  +  N+  A  +++EM+ R    + + Y   +  +C+ G ++   
Sbjct: 598 VSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGY 657

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             + EM   G  P   T   +I       R+ E+     +M+ + L+P
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 182/408 (44%), Gaps = 36/408 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G   SL S N L++ + +S    +   +Y  M      P+E T+  +  
Sbjct: 167 ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAK 226

Query: 67  ALCKGGQLQTYVDMLDRIHG-----------------------------------KRCSP 91
           A C+ G++   V+ ++ + G                                   K  SP
Sbjct: 227 AYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSP 286

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVV 150
            V+  T L+    ++ R+EE   ++K M    +++ D +AY +++    +   ++ A  V
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             EM   G   N FVY T I   C+ G++EE   ++QEME+ G++P   ++N LI+G  +
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCR 406

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              + ++   C  M+   L  +   +N +++  C       A  +  L L +G +PNEI+
Sbjct: 407 EGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            S L+ G  K G+ ++ L L+ E   + ++  +  + ++I+ LC+ G++ EA++    MK
Sbjct: 467 CSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
                P    Y +L   + + G    A HL  +M   G  PS     S
Sbjct: 527 ELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 185/411 (45%), Gaps = 42/411 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ +    RG + ++I+FNT+I+ + K  R      +   M E    P+  T RTL
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
               CK GQL T   +++++     +P V +  S I      ++  +   +   M  + +
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y  ++    K  NL  A  +Y EM+  G + N F+ +  +  + + GK++EAN 
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 185 LMQEMENAGLKP--------------------------YDETFNLLIEGCAKAKRIEESL 218
           ++Q++ N  + P                           +  +N++I G  K+ RI ++ 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S  E + +++ LP    ++ +I      G+  +A  +  + L  G +PN ITY+ LI G 
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK----------------LEEA 322
            K G++   + L+ +++ K ISP    Y +LI   C+ GK                +EEA
Sbjct: 781 CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEA 840

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            K    M  +++ P    Y +L+  +++ GN  +   L +EM   GL P+ 
Sbjct: 841 IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/380 (22%), Positives = 179/380 (47%), Gaps = 2/380 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEA 59
           M   E A  +   L+++G S +++++  L+    K  R +   R+ + M E      +E 
Sbjct: 266 MGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV 325

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I+  C+ G++     + + +        + V  ++I  + +  R+EE   +L+ M
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               M  D  +Y+ ++    +  ++  A  +   M++ G +A +  Y T +  +C    I
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           ++A  L   M   G+ P + + + L++G  KA + E++L+  ++ ++R L  +   FN +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+ G   +A  +L    +    P+ +TY  L  GY K G++     L  +ME+   
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P++  + S I+      +  + +     M +  L P +  Y +L+    ++GN  +A +
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 360 LCEEMVSEGLKPSTSYLCSA 379
           L  EMV+ G+ P+  ++CSA
Sbjct: 626 LYFEMVNNGMNPNV-FICSA 644



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 162/358 (45%), Gaps = 4/358 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++  +I+   +  R D   R+   M +   + N     T+I+ LCK G+++    +L  
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P      +LI    +E  + +   + + M+R  +   T+ Y+ ++     +  
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ AL ++  MLKRG + N    +T +    + GK E+A  L +E    GL     TFN 
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I G  K  R+ E+    ++M   +  P    +  +    C+ G    A  ++      G
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           F+P+   ++  I G+    +  +V  ++ EM  + +SP L  Y +LI+  C+ G L EA 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAST 381
             +  M ++ + P V I  +L+    ++G   +A  + +++V+  + P     CS ST
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG----CSIST 678



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/365 (21%), Positives = 156/365 (42%), Gaps = 47/365 (12%)

Query: 22  SLISFNTLIHVVTKSDR-NDL----------VWRIYQHMLENIR--YPNEATIRTLISAL 68
           SL+S   L+H++ ++ R +D              ++ H+ E  R    +  +   L+ A 
Sbjct: 99  SLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAH 158

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
              GQL + +++ D +    C P +     L+ +++Q        ++  +M    ++ D 
Sbjct: 159 ADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDE 218

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
              +++  A  +   +  A+   EEM   G   N   Y   +  YC  G  E+A  +++ 
Sbjct: 219 FTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ++  GL P   T+ LL++G  K  R+EE+                     +++ + E G+
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEA-------------------ERVVKEMKETGD 319

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
                    + +D      E+ Y  +I GY + G + +  ++  EM    I   L  Y +
Sbjct: 320 ---------IVVD------EVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT 364

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+ LC+ G++EE  K  + M+   + P    Y +L+  +  +G+  KA  +C  MV  G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 369 LKPST 373
           L  +T
Sbjct: 425 LAATT 429



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 21/176 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  + F     ++++LIH    S   D  + +   ML     PN  T  +LI  LCK G+
Sbjct: 726 LRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGK 785

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLI----------------LRIIQEERIEEGMVLLK 117
           L   V++ +++  K  SP  I   +LI                 ++++E  +EE + LL 
Sbjct: 786 LSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLD 845

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           +M+  N+  + I Y  +++  +K  N+E    +Y+EM  RG      + T +IG +
Sbjct: 846 QMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG-----LLPTNWIGNW 896


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 176/368 (47%), Gaps = 1/368 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R++E A ++   L Q+G + S +++ TL+  + K    ++   +   M+E    P EA +
Sbjct: 276 RVWE-AVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAAL 334

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L+  L + G++    D+++R+      P + V  +LI  + ++ + +E  +L K M  
Sbjct: 335 SSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE 394

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  + + YS+++ +  +   L++A+    +M+  G     + Y + I  +C+ G +  
Sbjct: 395 KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA 454

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A     EM + GLKP   ++  LI G     ++ E+     +M  + + P+   F  +I 
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L        A  +    L++   PNE+TY+ +I G+ KEG   +  +L  +M  K + P
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y  LISSLC  G++ EA K+   +           Y +L+  + ++G    AL +C
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVC 634

Query: 362 EEMVSEGL 369
            EMV  G+
Sbjct: 635 REMVKRGV 642



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 7/331 (2%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N      LI  LCK  ++   V++ + +  K  +   +   +L+L + + +  E G  ++
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M+    +    A S +V    +   +  A  +   + K G   + FVY   I + C+ 
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           GK +EA  L +EM   GL   D T+++LI+   +  +++ ++ +  +M+   +  +   +
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I   C+ GN   A       +DKG  P  ++Y+ LI GY  +G++ E  +LY+EM  
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K I+P    +T+LIS+L +  ++ +A + F  M   +++P    Y  ++  H ++GN  K
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 357 ALHLCEEMVSEGLKPST-------SYLCSAS 380
           A  L  +MV +GL P T       S LCS  
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 170/367 (46%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +  +G + +  +F TLI  + +++R    +R++  MLE    PNE T   +I 
Sbjct: 490 AFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIE 549

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G      ++L+++  K   P       LI  +    R+ E    +  + R++   
Sbjct: 550 GHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKL 609

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + YS +++   K   L  AL V  EM+KRG   +   Y   I    +         L+
Sbjct: 610 NEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLL 669

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M +  L+P    +  +I+G +KA  ++++    + M+     P+   +  +I  LC+ 
Sbjct: 670 KNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKA 729

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +    L    +PN +TY   +   A+EG +++ ++L+ +M  K +     +Y
Sbjct: 730 GLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSY 788

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+   C+ G++EEA K    M  +++ P    Y +++     +GN   A+   + M++
Sbjct: 789 NILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLN 848

Query: 367 EGLKPST 373
           +GLKP T
Sbjct: 849 KGLKPDT 855



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 167/358 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  +++  +N+LI+   K          +  M++    P   +  +LIS  C  G+L   
Sbjct: 431 GIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEA 490

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +   + GK  +P     T+LI  + +  R+ +   L   ML +NM+ + + Y++++  
Sbjct: 491 FRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  N   A  +  +M+++G   +++ Y   I + C  G++ EA   + ++     K  
Sbjct: 551 HCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN 610

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           +  ++ L+ G  K  R+ ++L  C +M+ R +      +  +I    +  +     G+L 
Sbjct: 611 EMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLK 670

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+   P+++ Y+ +I GY+K G +++   ++  M  +  +P +  YT+LI+ LC+ G
Sbjct: 671 NMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAG 730

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            +++A+  +K M   +  P    Y   +     +G+  KA+ L  +M+   L  + SY
Sbjct: 731 LMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSY 788



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 171/358 (47%), Gaps = 25/358 (6%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG--Q 73
            + F+ S +SF  LIH +  +               N+ +P  + ++TL   L +GG   
Sbjct: 98  HKNFNHSTMSFCILIHALVNA---------------NLFWPASSLLQTL---LLRGGLDP 139

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            + +  +LD    ++C  +  +   L+++  +QE+R+ + +++ + M +  ++       
Sbjct: 140 REVFEALLDCF--EKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLG 197

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K+R ++  LV++ E+L  G   + ++Y   I ++CE     +A  ++Q ME++
Sbjct: 198 EVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESS 257

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            L      +N+LI G  K KR+ E++     ++ + L  S   +  ++  LC+    +  
Sbjct: 258 DLNVV--VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVG 315

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            G++   ++ GF P E   S L+ G  ++G++ +   L   ++     P+L  Y +LI+S
Sbjct: 316 AGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINS 375

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           LC+ GK +EA+  FK M    L      Y  L+     +G    A+H   +M+  G+K
Sbjct: 376 LCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIK 433



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 137/278 (49%), Gaps = 1/278 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  VCR + +RG  + L+ +  LI    K      V+ + ++M +    P++    ++I 
Sbjct: 630 ALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMID 689

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G ++    + D +  + C+P ++  T+LI  + +   +++  +L K ML  N   
Sbjct: 690 GYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTP 749

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y   +    +  ++E A+ ++ +MLK G  AN+  Y   +  +C+ G++EEA  L+
Sbjct: 750 NHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLL 808

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM +  + P   T++ +I  C +   ++ ++ + + M+++ L P   A+N +I   C  
Sbjct: 809 DEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIA 868

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           G   +A  +    + +G  PN+ T+  L  G +++  I
Sbjct: 869 GELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSI 906


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 164/334 (49%), Gaps = 13/334 (3%)

Query: 59  ATIRTLISALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           A    L+   C+ G +   Q   D++ R+     +P  +  T+LI       R E+G+ L
Sbjct: 39  AACTALVHGYCRSGDVAEAQRVFDVMPRLG---LTPNEVTFTALIHGYFIHGRREKGLAL 95

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            ++M    +  +   Y+++V    +    E A +++EEM  +G + N   Y T I   C 
Sbjct: 96  FEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCR 155

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           Y K+++A  L++ M   G++P   TFNLL++G  KA ++  +L +  QM      PS   
Sbjct: 156 YRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVT 215

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I   C   +  +AN   +   ++G +P ++TY+ LI  +A+E ++ +  +++  ME
Sbjct: 216 YNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGME 275

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              +   +  Y  L+ +LC  G +++A K F+ +    L  G  IY+ L+  +  +G+  
Sbjct: 276 KAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSY 335

Query: 356 KALHLCEEMVSEGLKP-STSY------LCSASTC 382
           KA+ L  EM  +G  P S SY      LC+   C
Sbjct: 336 KAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKC 369



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 144/337 (42%), Gaps = 7/337 (2%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FDV   + + G + + ++F  LIH      R +    +++ M      PN  T   L+  
Sbjct: 61  FDV---MPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGE 117

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            C+ G+ +    + + +  K  +  V+   +LI  + +  ++++   LL+ M R+ +   
Sbjct: 118 WCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPS 177

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + ++L+V    K   + +AL    +M   G+  ++  Y   I  +C    +  AN    
Sbjct: 178 VVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFS 237

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M+  GL P   T+ +LI+  A+   ++++      M    L      +  ++  LC  G
Sbjct: 238 DMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEG 297

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
           N K A  +     +KG     + Y  LI GY +EG   + +KL  EM  K   P   +Y 
Sbjct: 298 NMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYG 357

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
             I  LC  GK  EA+     M    +  GV   ES+
Sbjct: 358 LTIRILCNDGKCSEAEALIDDM----VRAGVQTSESV 390



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 1/280 (0%)

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVV 150
           M       + R+     +   + LL R  +  +   D  A + +V+   +  ++  A  V
Sbjct: 1   MAATTAVAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRV 60

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           ++ M + G + N   +T  I  Y  +G+ E+   L ++M   G++P   T+N+L+    +
Sbjct: 61  FDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCR 120

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
               E +    E+M ++ +  +  ++N +I  LC     K A  +L L   +G  P+ +T
Sbjct: 121 TGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVT 180

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           ++ L+ GY K G++   L    +M      P+   Y +LI+  C+   +  A++ F  MK
Sbjct: 181 FNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMK 240

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              L P    Y  L+     + +  KA  +   M   GL+
Sbjct: 241 ERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLE 280


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 185/365 (50%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A+ +   +E R      I+F+ LI  ++ S +     +++  M++    P+E T   L
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTAL 291

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK G+++    + +++     +P V+  T+L   + +   ++    LL  M RK +
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   Y+ IV    K  N+  A+ + EEM + G   ++  YTT + AY + G++ +A  
Sbjct: 352 QLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARE 411

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++EM + GL+P   TFN+L+ G   + ++E+     + M+ + ++P+ + +N ++++ C
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              N + +  +      +G  P+  TY+ LI G+ K   ++E   L+ EM  K  + T  
Sbjct: 472 IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTAS 531

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +Y +LI    +  KL EA + F+ M+   LV   +IY   V ++ E+GN    L LC+E 
Sbjct: 532 SYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEA 591

Query: 365 VSEGL 369
           + + L
Sbjct: 592 IEKCL 596



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 186/398 (46%), Gaps = 43/398 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY----PNEATIRTLISALCKG 71
           Q G   +  S+N L++ + +  +     R   H+L  + +    P+  +  T+I   C  
Sbjct: 103 QLGVCWNTESYNILMNSLFRLGK----IREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHV 158

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+LQ  V ++  +  K   P +   +S+IL + +  ++ EG  +L+ M+++ +  D + Y
Sbjct: 159 GELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIY 218

Query: 132 SLIVYAKVKMRNLE---------------------SALV--------------VYEEMLK 156
           + ++    K+ N +                     SAL+              ++ EM+K
Sbjct: 219 TTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIK 278

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           +GF  +   YT  I  YC+ G++++A  L  +M   GL P   T+  L +G  K+  ++ 
Sbjct: 279 KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDT 338

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +     +M  + L  + S +N ++  LC+ GN  QA  ++    + G  P+ ITY+ L+ 
Sbjct: 339 ANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMD 398

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            Y K GE+ +  +L  EM  + + PT+  +  L++ LC  GKLE+ ++  K M    ++P
Sbjct: 399 AYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMP 458

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
               Y S++  +  + N   +  +   M ++G+ P ++
Sbjct: 459 NAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSN 496



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 169/361 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   +L +++++I ++ KS +     ++ + M++   +P+     TLI   CK G 
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            Q    +   +  +   P  I  ++LI  +    ++ E   L   M++K    D + Y+ 
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++ A  ++ +M++ G + N   YT      C+ G+++ AN L+ EM   G
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+    T+N ++ G  KA  I +++   E+M    L P    +  ++    + G   +A 
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   LD+G  P  +T++ L+ G    G++++  +L   M  K I P    Y S++   
Sbjct: 411 ELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C    +  + + ++ M +  +VP  + Y  L+  H +  N  +A  L +EMV +    + 
Sbjct: 471 CIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTA 530

Query: 374 S 374
           S
Sbjct: 531 S 531



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 1/357 (0%)

Query: 18  GFSLSLISFNT-LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           G +LS  S N  L  + +K D   +V +++    +     N  +   L+++L + G+++ 
Sbjct: 69  GVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIRE 128

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L R+  K C P V+  T++I        +++ + L+K M  K +  +   YS I+ 
Sbjct: 129 AHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIIL 188

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +     V  EM+KRG   +  +YTT I  +C+ G  + A  L  EME   + P
Sbjct: 189 LLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVP 248

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               F+ LI G + + ++ E+     +M+ +   P    +  +I   C+ G  K+A  + 
Sbjct: 249 DSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLH 308

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +  G +PN +TY+ L  G  K GE+    +L +EM  K +   +  Y ++++ LC+ 
Sbjct: 309 NQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKA 368

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G + +A K  + MK   L P    Y +L+  + + G   KA  L  EM+  GL+P+ 
Sbjct: 369 GNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTV 425



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 100/217 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G     I++ TL+    K+        + + ML+    P   T   L++ LC  G+
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGK 440

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+    +L  +  K   P      S++ +      +     + + M  + ++ D+  Y++
Sbjct: 441 LEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNI 500

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K RN++ A  +++EM+++ F+  +  Y   I  + +  K+ EA  L +EM   G
Sbjct: 501 LIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           L    E +NL ++   +   +E +L  C++ + + LL
Sbjct: 561 LVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLL 597


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 158/339 (46%), Gaps = 35/339 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG   +++SFNTLI+   KS   D  +R+ + M+EN  +P+  T   LI+ LCK GQ  
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ-- 310

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                                            +++   L   M  + ++ + + ++ ++
Sbjct: 311 ---------------------------------LDDANKLFLEMCDRGLVPNDVTFTTLI 337

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                    +  + +Y++ML++G   +   Y T I   C+ G + EA  L+ EM   GLK
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ +LI+GC K   +E +L   ++M+   +     AF  +I   C  G   +A   
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERT 457

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   L+ G  P++ TY+ +I G+ K+G+++   KL  EM+     P +  Y  L++ LC+
Sbjct: 458 LREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCK 517

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
            G+++ A+     M +  +VP    Y  L+  H + GN+
Sbjct: 518 QGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNR 556



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 158/369 (42%), Gaps = 15/369 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++ F  C YL  R   L+L S                 W  Y+ +L+    P+      
Sbjct: 186 LQIPFHSCGYLFDRLMKLNLTS---------------PAWAFYEEILDCGYPPDVCKFNV 230

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LCK  ++     +   I  +   P V+   +LI    +   +++G  L + M+   
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS+++    K   L+ A  ++ EM  RG   N   +TT I  +C  G+ +   
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + Q+M   G+KP   T+N LI G  K   + E+     +M  R L P    +  +I   
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ + A  +    + +G   + + ++ LI G+ +EG++ E  +   EM    I P  
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT +I   C+ G ++   K  K M+    VPGV  Y  L+    ++G    A  L + 
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530

Query: 364 MVSEGLKPS 372
           M++ G+ P 
Sbjct: 531 MLNLGVVPD 539


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 177/367 (48%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLI 65
           A  V   +   GF   L ++N L   + ++ + D  +R+   M       P+  T  TL+
Sbjct: 297 ATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLV 356

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A  K       + +L+ +  K   P ++ +  ++  + +E ++EE +  L+++  + + 
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++ A  K  N+  A  + +EM+ +G   ++F   T +   C+  + E+A  L
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +      G  P + ++  ++    K    E +L   +QM+ RKL+PS S +N +I+ LC 
Sbjct: 477 LHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCR 536

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
               K+A   L   ++KG  P+E TY+ +I  Y KEG+++   + + +M   S  P +  
Sbjct: 537 MERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVT 596

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             +L++ LC  GKL++A K F+          V  Y +L+    + G+   ALH  ++M 
Sbjct: 597 CNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDME 656

Query: 366 SEGLKPS 372
            +GL+P 
Sbjct: 657 VKGLQPD 663



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 174/378 (46%), Gaps = 4/378 (1%)

Query: 1   MRLFEVAFDVCRYLEQR-GFSLSLISFNTLIHVVTKSDRN--DLVWRIYQHMLENIRYPN 57
           +RL  +A  +   L +R G   SL + N ++  +++S          +++ ++E   +PN
Sbjct: 148 LRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPN 207

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             T   L+   C  G L   +  L  + G   SP  +   +L+    ++  + E   LL 
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           RM R  +      Y+ +V A  ++  ++ A  V E M   GF  +   Y       C+ G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAG 327

Query: 178 KIEEANCLMQEMENAGLK-PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           K++EA  L  EME  G   P   T+N L++ C K +   ++L   E+M  + + P+    
Sbjct: 328 KVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +++ LC+ G  ++A G L    ++G +P+ ITY+ LI  Y K G + +   L  EM  
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K +        +++ +LC+  + E+A++          VP    Y +++  + ++ N   
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 357 ALHLCEEMVSEGLKPSTS 374
           AL L ++M+   L PS S
Sbjct: 508 ALRLWDQMIERKLIPSIS 525



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 176/372 (47%), Gaps = 2/372 (0%)

Query: 7   AFDVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           AF +   +E+ G +L  ++++NTL+    K   +    R+ + M +    P   T   ++
Sbjct: 332 AFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVV 391

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            +LCK G+L+  +  L++I  +  +P VI   +LI    +   + +   L+  M+ K + 
Sbjct: 392 KSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLK 451

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            DT   + ++Y   KM+  E A  +     +RGF  +   Y T + AY +    E A  L
Sbjct: 452 MDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRL 511

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             +M    L P   T+N LI+G  + +R++E++    + + + L+P  + +N +I   C+
Sbjct: 512 WDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCK 571

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+ + A       ++  F P+ +T + L+ G    G++ + LKL+     K     +  
Sbjct: 572 EGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVIT 631

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI S+C+ G ++ A  +F  M+   L P    Y  ++    E G   +A ++  ++ 
Sbjct: 632 YNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLA 691

Query: 366 SEGLKPSTSYLC 377
             G K S S+ C
Sbjct: 692 DSG-KLSQSFAC 702



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 146/317 (46%), Gaps = 1/317 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +  +G  +   + NT+++ + K  R +    +     +    P+E +  T+++
Sbjct: 438 AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K    +  + + D++  ++  P +    +LI  + + ER++E +  L   + K ++ 
Sbjct: 498 AYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVP 557

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++I++A  K  +LE+A   + +M++  F  +     T +   C +GK+++A  L 
Sbjct: 558 DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +     G K    T+N LI+   K   ++ +L + + M  + L P    +N ++  L E 
Sbjct: 618 ESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEA 677

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE-VLKLYYEMEYKSISPTLPA 305
           G +++A+ ML    D G          L    A E +++E   K   E   K+    L  
Sbjct: 678 GRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALET 737

Query: 306 YTSLISSLCQCGKLEEA 322
           Y   ++ LC  G+L+EA
Sbjct: 738 YMERLNGLCTGGQLKEA 754



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 131/321 (40%), Gaps = 36/321 (11%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +E A ++     QRGF    +S+ T++    K    +   R++  M+E    P+ +T
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC+  +L+  +D L+    K   P       +I    +E  +E       +M+
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             +   D +  + ++        L+ AL ++E  +++G   +   Y T I + C+ G ++
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR---------KLLP 231
            A     +ME  GL+P   T+N+++   ++A R EE+ +   ++             LL 
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLK 706

Query: 232 SCSA---------------------------FNEMIRRLCECGNAKQANGMLTLALDKGF 264
             SA                           + E +  LC  G  K+A  +L   + KG 
Sbjct: 707 PSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGM 766

Query: 265 SPNEITYSHLIGGYAKEGEIQ 285
             +  TY  L+ G  K  + Q
Sbjct: 767 PVDCSTYITLMEGLIKRQKRQ 787


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 165/351 (47%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++S NT++    K    D+    +  M++N    +  +   L+  LC  G +   +   
Sbjct: 270 SIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFT 329

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +      P V+   +L    +    +     ++++ML + +  D + Y+ ++    +M
Sbjct: 330 DDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQM 389

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+E AL + +E L RGF  N   Y   +   C+ G+IEEA  L  EME   L+P    +
Sbjct: 390 GNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVY 449

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++LI G  K   ++ +    EQM  ++  P   A   ++  L + GN  +A         
Sbjct: 450 SILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTR 509

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                + + Y+ +I GY +   I E ++LYY+M  + I+P++  + +LI+  C+ G L E
Sbjct: 510 MDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLME 569

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A K  ++++   LVP V  Y +L+  + E GN  +  H   EM +  + P+
Sbjct: 570 ARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPT 620



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 172/354 (48%), Gaps = 2/354 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQ 75
           RGF L++I +N L+  + K  R +    ++  M E +R  P+      LI  LCK G +Q
Sbjct: 405 RGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEM-ETLRLEPDFIVYSILIHGLCKEGFVQ 463

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + +++  KR  P      +++L + +   I E         R +++ D + Y++++
Sbjct: 464 RAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMI 523

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              V++  +  A+ +Y +M++RG + +   + T I  +C  G + EA  +++ +   GL 
Sbjct: 524 DGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLV 583

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  L+    +   ++E   +  +M +  ++P+   +  +I+ LC      ++  +
Sbjct: 584 PSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQL 643

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     KG  P+ +TY+ +I  + K  EI + L+LY  M   +  PT   Y  LI++LC 
Sbjct: 644 LEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCI 703

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            G L++ D+    ++  ++      Y +++  H  KG  +KAL    +M+++G 
Sbjct: 704 FGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 2/360 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G    ++++NTL              ++ Q ML     P+  T  TLI   C+ G 
Sbjct: 332 MEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGN 391

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +      +     VI    L+  + +  RIEE + L   M    +  D I YS+
Sbjct: 392 IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSI 451

Query: 134 IVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++   K   ++ A  +YE+M LKR F  +       +G + + G I EA          
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLF-KNGNISEARNYFDTWTRM 510

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            L      +N++I+G  +   I E++    +M+ R + PS   FN +I   C  G+  +A
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ML +   KG  P+ +TY+ L+  Y + G +QE+    +EME  ++ PT   YT LI  
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKG 630

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+  K+ E+ +  + M +  L+P    Y +++    +     KAL L   M+     P+
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPT 690



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 138/280 (49%), Gaps = 10/280 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPNEATIRTLISALCKG 71
           +RG + S+++FNTLI+   +  R DL+    + MLE IR     P+  T  TL++A C+ 
Sbjct: 544 ERGITPSVVTFNTLINGFCR--RGDLMEA--RKMLEVIRLKGLVPSVVTYTTLMNAYCEV 599

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +Q     L  +      P  +  T LI  + ++ ++ E + LL+ M  K ++ D++ Y
Sbjct: 600 GNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTY 659

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + I+    K + +  AL +Y  ML          Y   I A C +G +++ + ++  +E+
Sbjct: 660 NTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719

Query: 192 AGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             +     T+  +I+  CAK + + ++L Y  QM+++  + S   ++ +I RLC+ G   
Sbjct: 720 RNITLKKVTYMTIIKAHCAKGQ-VSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLIT 778

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           +A     + L +G +P+      ++  + ++G    V + 
Sbjct: 779 EAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEF 818



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/402 (21%), Positives = 157/402 (39%), Gaps = 74/402 (18%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   ++   F  S+ ++N+L+H +  +D   ++W +Y  +  +    +E T   LI 
Sbjct: 189 ALFVIAKMKDLNFQASVPTYNSLLHNMRHTD---IMWDVYNEIKVSGAPQSECTTSILIH 245

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+  +L+  +  L   +      +V +NT      I  +  + G++ + R        
Sbjct: 246 GLCEQSKLEDAISFLHDSNKVVGPSIVSINT------IMSKFCKVGLIDVARSF------ 293

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
                                   +  M+K G   +SF Y   +   C  G ++EA    
Sbjct: 294 ------------------------FCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFT 329

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +ME  G++P   T+N L +G      +  +    ++M+ + L P    +  +I   C+ 
Sbjct: 330 DDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQM 389

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN ++A  +    L +GF  N I Y+ L+    K G I+E L L+ EME   + P    Y
Sbjct: 390 GNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVY 449

Query: 307 TSLISSLC-----------------------------------QCGKLEEADKYFKIMKS 331
           + LI  LC                                   + G + EA  YF     
Sbjct: 450 SILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTR 509

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+  V +Y  ++  ++     A+A+ L  +M+  G+ PS 
Sbjct: 510 MDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSV 551



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 115/269 (42%), Gaps = 22/269 (8%)

Query: 121 RKNMIHDTIAYSLIVYAKVK-----------------MRNLESALVVYEEMLKRGFSANS 163
           R  MIHD    +L V AK+K                 MR+ +    VY E+   G   + 
Sbjct: 182 RHEMIHD----ALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSE 237

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
              +  I   CE  K+E+A   + +  N  + P   + N ++    K   I+ + S+   
Sbjct: 238 CTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCL 296

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   LL    ++N ++  LC  G+  +A G        G  P+ +TY+ L  G+   G 
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGL 356

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           +    K+  +M  + ++P L  YT+LI   CQ G +EEA K  +   S      V  Y  
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+    + G   +AL L +EM +  L+P 
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPD 445



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 8/276 (2%)

Query: 98  SLILRIIQEERIEEGMVLLKRMLRK--NMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
           S+I  +I ++ +    ++   +L K  N   + + + ++ +A  +   +  AL V  +M 
Sbjct: 138 SVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMK 197

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
              F A+   Y + +        + +   +  E++ +G    + T ++LI G  +  ++E
Sbjct: 198 DLNFQASVPTYNSLLHNMRHTDIMWD---VYNEIKVSGAPQSECTTSILIHGLCEQSKLE 254

Query: 216 ESLSYCEQMMSRKLL-PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           +++S+     S K++ PS  + N ++ + C+ G    A     L +  G   +  +Y+ L
Sbjct: 255 DAISFLHD--SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNIL 312

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           + G    G + E L    +ME   + P +  Y +L       G +  A K  + M    L
Sbjct: 313 LHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGL 372

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            P +  Y +L+  H + GN  +AL L +E +S G K
Sbjct: 373 NPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFK 408


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 14/376 (3%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           + C   E+   +G + SL+S+N LI    K    D  + + + +LE    PN  T   LI
Sbjct: 447 EACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLI 506

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
               K G  +    + +++     +P      ++I  + +  R+ E    L   +++  +
Sbjct: 507 DGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFV 566

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
             +I Y+ I+    K   ++SAL+ Y EM + G S +   YT+ I   C+  KI  A  +
Sbjct: 567 STSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEM 626

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             +M+  G+K     ++ LI+G  K   +E +  +  +++   L P+   +N MI     
Sbjct: 627 HSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIH 686

Query: 246 CGNAKQANGMLTLALDKGFSPNEI-----TYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             N + A     L L +    N++      Y+ +IGG  KEG++   L LY EM  K I 
Sbjct: 687 LNNMEAA-----LNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIV 741

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  YT LI+ L   G+LE A K  K M  +++ P V +Y  L+  +  +GN  +A  L
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRL 801

Query: 361 CEEMVSEGLKP-STSY 375
            +EM+ +GL P  T+Y
Sbjct: 802 HDEMLDKGLVPDDTTY 817



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 1/334 (0%)

Query: 40  DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           +L  +++  ++E    P+      LI+   K G ++   ++  R+      P V +  SL
Sbjct: 342 NLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSL 401

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +    ++  +E    L    +    I + + Y++++    ++  +  A  ++E+M+ +G 
Sbjct: 402 LEGFHEQNLLEHAYGLFDEAVEHG-ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGI 460

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           + +   Y   I  +C+ G +++A  +++ +   GLKP   T+ LLI+G  K    E +  
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFV 520

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             EQMM+  + P+   FN +I  L + G   +    L   + +GF    ITY+ +I G+ 
Sbjct: 521 VFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFF 580

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG +   L  Y EM    ISP +  YTSLI  LC+  K+  A +    MK   +   V 
Sbjct: 581 KEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVV 640

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Y +L+    +  +   A     E++  GL P+T
Sbjct: 641 AYSALIDGFCKMHDMESASKFFTELLDIGLTPNT 674



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 148/329 (44%), Gaps = 1/329 (0%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           ++Y  M+E   Y +  T+  ++ A  K G+ +          G+         + L+  +
Sbjct: 206 QLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAV 265

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +   +     LLK M     +     Y+ ++ A VK  N   AL + +EM+  G   N 
Sbjct: 266 CRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNV 325

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
            V  + +  YC  G +  A  L  E+   G+ P    F++LI GC+K   +E++     +
Sbjct: 326 IVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTR 385

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M    + P+    N ++    E    + A G+   A++ G + N +TY+ L+    + G+
Sbjct: 386 MKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGK 444

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           + E   L+ +M  K I+P+L +Y +LI   C+ G +++A    K +    L P    Y  
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+    +KG+  +A  + E+M++  + P+
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPT 533



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 147/341 (43%), Gaps = 35/341 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ + + + +RG   + +++  LI    K   ++  + +++ M+     P + T  T+I+
Sbjct: 483 AYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVIN 542

Query: 67  ALCKGGQLQTYVDMLDR----------------IHG-------------------KRCSP 91
            L K G++    D L+                 I G                      SP
Sbjct: 543 GLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISP 602

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
            VI  TSLI  + +  +I   + +   M  K M  D +AYS ++    KM ++ESA   +
Sbjct: 603 DVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFF 662

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            E+L  G + N+ VY + I  +     +E A  L QEM    +    + +  +I G  K 
Sbjct: 663 TELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKE 722

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            ++  +L    +M+S+ ++P    +  +I  L   G  + A+ +L        +P+ + Y
Sbjct: 723 GKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVY 782

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           + LI G  +EG +QE  +L+ EM  K + P    Y  L++ 
Sbjct: 783 NILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 126/265 (47%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++GF  + I++N++I    K    D     Y+ M E+   P+  T  +LI  LCK  ++ 
Sbjct: 562 KQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIG 621

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             ++M   +  K     V+  ++LI    +   +E        +L   +  +T+ Y+ ++
Sbjct: 622 LALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              + + N+E+AL +++EM+K     +  VYT+ IG   + GK+  A  L  EM +  + 
Sbjct: 682 SGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIV 741

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    + +LI G +   ++E +    ++M    + PS   +N +I      GN ++A  +
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRL 801

Query: 256 LTLALDKGFSPNEITYSHLIGGYAK 280
               LDKG  P++ TY  L+ G  K
Sbjct: 802 HDEMLDKGLVPDDTTYDILVNGKLK 826



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 1/282 (0%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V +  +L+  +++   + +   L   M+ + +  D     +++ A +K    E     
Sbjct: 183 PWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKF 242

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           ++E   RG   ++  Y+  + A C    +  A  L++EM   G  P   T+  +I  C K
Sbjct: 243 FKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVK 302

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
                E+L   ++M+S  L  +      +++  C  G+   A  +    ++ G  P+ + 
Sbjct: 303 QGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVI 362

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           +S LI G +K G++++  +LY  M+   I P +    SL+    +   LE A   F    
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            H  +  V  Y  L+    E G   +A +L E+MVS+G+ PS
Sbjct: 423 EHG-ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPS 463



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 97/206 (47%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A ++   ++ +G  L +++++ LI    K    +   + +  +L+    PN     ++I
Sbjct: 622 LALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           S       ++  +++   +   +    + V TS+I  +++E ++   + L   ML K+++
Sbjct: 682 SGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIV 741

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y++++        LE+A  + +EM     + +  VY   I      G ++EA  L
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRL 801

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKA 211
             EM + GL P D T+++L+ G  K 
Sbjct: 802 HDEMLDKGLVPDDTTYDILVNGKLKV 827



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 8/190 (4%)

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE----M 239
           CL++     G +     FN L++   +  +I +++     M+   L+P     N     M
Sbjct: 136 CLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAM 195

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           +RR   C +A+Q   +    +++G   +  T   ++    KEG+ +EV K + E + + +
Sbjct: 196 VRRNMVC-DARQ---LYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGL 251

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
                AY+ L+ ++C+   L  A +  K M+    VP    Y +++   +++GN  +AL 
Sbjct: 252 EVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALR 311

Query: 360 LCEEMVSEGL 369
           L +EMVS GL
Sbjct: 312 LKDEMVSVGL 321



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/247 (21%), Positives = 108/247 (43%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D+  ++ ++ + V++  +  A+  +  ML+        +    + A      + +A  L 
Sbjct: 149 DSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLY 208

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+     T ++++  C K  + EE   + ++   R L    +A++ +++ +C  
Sbjct: 209 DEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRR 268

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +   A  +L    + G+ P++ TY+ +I    K+G   E L+L  EM    +   +   
Sbjct: 269 LDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVT 328

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SL+   C  G +  A + F  +    +VP V I+  L+    + G+  KA  L   M  
Sbjct: 329 RSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKL 388

Query: 367 EGLKPST 373
            G++P+ 
Sbjct: 389 MGIQPNV 395



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 91/218 (41%)

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           + GF ++S V+   + ++    KI +A    + M    L P+    N L+    +   + 
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           ++    ++M+ R +   C   + ++R   + G  ++       A  +G   +   YS L+
Sbjct: 203 DARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILV 262

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
               +  ++    +L  EM      P+   YT++I +  + G   EA +    M S  L 
Sbjct: 263 QAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLP 322

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             V +  SL+  +   G+   AL L +E+V  G+ P  
Sbjct: 323 MNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDV 360


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 153/319 (47%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           A    L+   C+ G +     + D +     +P  +  T+LI       + E G  L+  
Sbjct: 39  AACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGE 98

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M R  +  +   Y+ +V    +    +SA ++++EM  +G   N   Y   I   C +GK
Sbjct: 99  MRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGK 158

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +++A  L + M   G+ P   TFNLLI+G  KA ++  +L +  QM +  L PS   +NE
Sbjct: 159 LKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNE 218

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C   +   A    +   ++  +P ++TY+ LIG +AKE E+    ++  EME   
Sbjct: 219 LIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAG 278

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +   + +Y  L+ +LC  GK+  A K F+ M S  + P   +Y+ ++  +  +G+  KAL
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKAL 338

Query: 359 HLCEEMVSEGLKPSTSYLC 377
            L  EM   GL P+ +  C
Sbjct: 339 RLIMEMRKSGLIPNVASYC 357



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 137/327 (41%), Gaps = 3/327 (0%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FDV   + + G + + +++  LIH      + ++ + +   M      PN  T   L+  
Sbjct: 61  FDV---MPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGE 117

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            C+ G+ ++   + D +  K     V+    LI  + +  ++++   L + M R+ +   
Sbjct: 118 WCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPS 177

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + ++L++    K   + +AL  + +M   G   +   Y   IG +C    I  A     
Sbjct: 178 MVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFS 237

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M+   L P   T+ +LI   AK   ++ +     +M    L     ++  ++  LC  G
Sbjct: 238 DMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEG 297

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               A  +      KG  PN + Y  +I GY +EG   + L+L  EM    + P + +Y 
Sbjct: 298 KMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYC 357

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSL 334
             I  LC  GK +EA+     M+   L
Sbjct: 358 LTIRLLCNEGKCQEAEALIGDMEDAGL 384



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 1/272 (0%)

Query: 100 ILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           + R+     +   + +L R  +  +   D  A + +V+   +  ++  A  V++ M + G
Sbjct: 9   VRRLCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLG 68

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            + N   YT  I  Y   G+ E    L+ EM   G++P   T+N L+    +    + + 
Sbjct: 69  VTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSAR 128

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              ++M  + ++ +  ++N +I  LC  G  K A  +      +G  P+ +T++ LI GY
Sbjct: 129 LLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGY 188

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K G++   L  + +M+   + P++  Y  LI   C+   +  A + F  MK   L P  
Sbjct: 189 GKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTK 248

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             Y  L+G   ++    +A  +  EM   GL+
Sbjct: 249 VTYTILIGAFAKENEMDRAFEMLSEMEKAGLE 280



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/252 (21%), Positives = 111/252 (44%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   +++S+N LI  + +  +     ++++ M     +P+  T   LI    K G++  
Sbjct: 137 KGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSN 196

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +   +++      P V+    LI    +   I   +     M  + +    + Y++++ 
Sbjct: 197 ALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIG 256

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   ++ A  +  EM K G   +   Y   + A C  GK+  A  L Q M++ G+KP
Sbjct: 257 AFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKP 316

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
            +  ++++I G  +     ++L    +M    L+P+ +++   IR LC  G  ++A  ++
Sbjct: 317 NNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALI 376

Query: 257 TLALDKGFSPNE 268
               D G   +E
Sbjct: 377 GDMEDAGLQTSE 388



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 83/197 (42%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G   S++++N LI    ++       R +  M E    P + T   LI A  K  +
Sbjct: 204 MKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENE 263

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    +ML  +        V     L+  +  E ++     L + M  K +  + + Y +
Sbjct: 264 MDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDM 323

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++Y   +  +   AL +  EM K G   N   Y   I   C  GK +EA  L+ +ME+AG
Sbjct: 324 MIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAG 383

Query: 194 LKPYDETFNLLIEGCAK 210
           L+  +    +L +  A+
Sbjct: 384 LQTSESICRVLFDAKAR 400


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 178/367 (48%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLI 65
           A  V   +   GF   L ++N L   + ++ + D  +R+   M   +   P+  T  TL+
Sbjct: 297 ATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLV 356

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A  K       + +L+ +  K   P ++ +  ++  + +E ++EE +  L+++  + + 
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLA 416

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++ A  K  N+  A  + +EM+ +G   ++F   T +   C+  + E+A  L
Sbjct: 417 PDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEEL 476

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +      G  P + ++  ++    K    E +L   +QM+ RKL+PS S +N +I+ LC 
Sbjct: 477 LHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCR 536

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
               K+A   L   ++KG  P+E TY+ +I  Y KEG+++   + + +M   S  P +  
Sbjct: 537 MERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVT 596

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             +L++ LC  GKL++A K F+          V  Y +L+    + G+   ALH  ++M 
Sbjct: 597 CNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDME 656

Query: 366 SEGLKPS 372
            +GL+P 
Sbjct: 657 VKGLQPD 663



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 173/378 (45%), Gaps = 4/378 (1%)

Query: 1   MRLFEVAFDVCRYLEQR-GFSLSLISFNTLIHVVTKSDRN--DLVWRIYQHMLENIRYPN 57
           +RL  +A  +   L +R G   SL + N ++  +++S          +++ ++E   +PN
Sbjct: 148 LRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPN 207

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             T   L+   C  G L   +  L  + G   SP  +   +L+    ++  + E   LL 
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           RM R  +      Y+ +V A  ++  ++ A  V E M   GF  +   Y       C+ G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAG 327

Query: 178 KIEEANCLMQEMENAGLK-PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           K++EA  L  EME      P   T+N L++ C K +   ++L   E+M  + + P+    
Sbjct: 328 KVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +++ LC+ G  ++A G L    ++G +P+ ITY+ LI  Y K G + +   L  EM  
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K +        +++ +LC+  + E+A++          VP    Y +++  + ++ N   
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 357 ALHLCEEMVSEGLKPSTS 374
           AL L ++M+   L PS S
Sbjct: 508 ALRLWDQMIERKLIPSIS 525



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 176/372 (47%), Gaps = 2/372 (0%)

Query: 7   AFDVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           AF +   +E+   +L  ++++NTL+    K   +    R+ + M +    P   T   ++
Sbjct: 332 AFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVV 391

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            +LCK G+L+  +  L++I  +  +P VI   +LI    +   + +   L+  M+ K + 
Sbjct: 392 KSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLK 451

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            DT   + ++Y   KM+  E A  +     +RGF  +   Y T + AY +    E A  L
Sbjct: 452 MDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRL 511

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             +M    L P   T+N LI+G  + +R++E++    +++ + L+P  + +N +I   C+
Sbjct: 512 WDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCK 571

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+ + A       ++  F P+ +T + L+ G    G++ + LKL+     K     +  
Sbjct: 572 EGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVIT 631

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI S+C+ G ++ A  +F  M+   L P    Y  ++    E G   +A ++  ++ 
Sbjct: 632 YNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLA 691

Query: 366 SEGLKPSTSYLC 377
             G K S S+ C
Sbjct: 692 DSG-KLSQSFAC 702



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 147/317 (46%), Gaps = 1/317 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +  +G  +   + NT+++ + K  R +    +     +    P+E +  T+++
Sbjct: 438 AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K    +  + + D++  ++  P +    +LI  + + ER++E +  L  ++ K ++ 
Sbjct: 498 AYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVP 557

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++I++A  K  +LE+A   + +M++  F  +     T +   C +GK+++A  L 
Sbjct: 558 DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +     G K    T+N LI+   K   ++ +L + + M  + L P    +N ++  L E 
Sbjct: 618 ESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEA 677

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE-VLKLYYEMEYKSISPTLPA 305
           G +++A+ ML    D G          L    A E +++E   K   E   K+    L  
Sbjct: 678 GRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALET 737

Query: 306 YTSLISSLCQCGKLEEA 322
           Y   ++ LC  G+L+EA
Sbjct: 738 YMERLNGLCTGGQLKEA 754



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 132/321 (41%), Gaps = 36/321 (11%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +E A ++     QRGF    +S+ T++    K    +   R++  M+E    P+ +T
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC+  +L+  +D L+ +  K   P       +I    +E  +E       +M+
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             +   D +  + ++        L+ AL ++E  +++G   +   Y T I + C+ G ++
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR---------KLLP 231
            A     +ME  GL+P   T+N+++   ++A R EE+ +   ++             LL 
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLK 706

Query: 232 SCSA---------------------------FNEMIRRLCECGNAKQANGMLTLALDKGF 264
             SA                           + E +  LC  G  K+A  +L   + KG 
Sbjct: 707 PSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGM 766

Query: 265 SPNEITYSHLIGGYAKEGEIQ 285
             +  TY  L+ G  K  + Q
Sbjct: 767 PVDSSTYITLMEGLIKRQKRQ 787


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 166/347 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           + T++H + ++ R +    + +  + N   PN      LI   C  G+++  + + + + 
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           G RCSP V   T LI  + +  ++E  MVL  RM+   +  + + Y+ ++  +    +L+
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +   M   G   N + ++  I A C+  K+EEA   +  +   G+K  +  +  LI
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G  K  +I+ +    ++M+S   +P   +++ +I  LC      QA  ML   ++KG  
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + +TY+ +I    +E   +   K++ +M    I+P +  YT  + S C+ G++E+A+  
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M    + P +  Y +L+  +   G  ++A    E MV +G KP+
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN 526



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 166/347 (47%), Gaps = 8/347 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +++ +N LI     +   +   ++++ M  N   PN  T   LI  LCK G+++  
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +  R+      P V+  T+LI     E  ++    LL  M    ++ +   +S+++ A
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E A +    ++K+G   N  VYT+ I   C+ GKI+ A+ LMQ+M + G  P 
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF----NEMIRRLCECGNAKQAN 253
             +++ LI+G  + K++ ++    E MM + +  S   +    +E++R +   G  K  +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M+      G +P+ +TY+  +  Y +EG +++   +  +M  + + P L  Y +LI   
Sbjct: 447 KMIA----TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
              G + +A   F++M      P  D Y  L+ + ++K +   ++ +
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 143/316 (45%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N  T  TLI+A C  G +      L  +     +P     TS +L   +   +     + 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M  +  +     Y+ +++  +    +  A+ V+  M     + ++ VY T +   CE 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+ EEA  L++E  + G +P    +N LI+G   A  +E +L   E M   +  P+   +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
            E+I  LC+ G  ++A  + +  ++ G  PN +TY+ LI G   EG +Q   +L + ME 
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             + P    ++ LI +LC+  K+EEA  +   +    +     +Y SL+    + G    
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 357 ALHLCEEMVSEGLKPS 372
           A  L ++M+SEG  P 
Sbjct: 371 ADELMQKMISEGFVPD 386



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 142/317 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+     + +   C+ G L     +   +  + C       T+L+  ++    + E M +
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M   +   DT  Y+ +V+   +    E A V+ EE +  GF  N  VY   I  YC 
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++E A  + + M+     P   T+  LI G  K+ ++E ++    +M+   L P+   
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I+  C  G+ + A  +L L    G  PN+ T+S LI    K  +++E       + 
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K +      YTSLI  LC+ GK++ AD+  + M S   VP    Y SL+     +   +
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  + E+M+ +G++ S
Sbjct: 405 QATLMLEDMMEKGIQAS 421



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/418 (20%), Positives = 175/418 (41%), Gaps = 47/418 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + AF +   +E  G   +  +F+ LI  + K ++ +        +++     NE    +
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LCK G++    +++ ++  +   P     +SLI  + +++++ +  ++L+ M+ K 
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + Y++I+   V+    E    ++++M+  G + +   YT F+ +YCE G++E+A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM---- 239
            ++ +M + G+ P   T+N LI G A    + ++ S  E M+ +   P+  ++  +    
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLV 537

Query: 240 -------------------------------------------IRRLCECGNAKQANGML 256
                                                      IR LC     ++A    
Sbjct: 538 VKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFF 597

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               +   +P+E  Y+ +I    +   + + L L   M      P L +Y  +ISSLC+ 
Sbjct: 598 MGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEG 657

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           G    A + F  +          +++ L+   L+KG+ A+   L   M   G +PS +
Sbjct: 658 GNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNT 715



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 35/256 (13%)

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP----YDE-------- 199
           E +  R  + N   YTT I AYC  G I  A   +  + +AGL P    Y          
Sbjct: 61  ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRA 120

Query: 200 -----------------------TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
                                  T+  L+ G   A  + E+++    M +    P    +
Sbjct: 121 GMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVY 180

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             M+  LCE G  ++A  +L  A+  GF PN + Y+ LI GY   GE++  LK++  M+ 
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
              SP +  YT LI  LC+ GK+E A   F  M    L P V  Y +L+     +G+   
Sbjct: 241 NRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 357 ALHLCEEMVSEGLKPS 372
           A  L   M + GL P+
Sbjct: 301 AFRLLHLMETNGLVPN 316


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 180/368 (48%), Gaps = 3/368 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ R    +G  +   + + L++ + K  + +    + + ++E+   P E    T+++
Sbjct: 226 ALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G +   +  ++++  +   P  I   S+I +  + + I++    +K+M+ K +  
Sbjct: 286 GYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y++++    ++        + EEM + G   N   Y + I   C+ GKI EA  ++
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   G+ P    +N+LI+G     ++ E+L + ++M    +  +   +N +I+ LC+ 
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKM 465

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  K+A  M  L    G  P+ ITY+ LI GY+  G  Q+ L+LY  M+   + PT+  +
Sbjct: 466 GKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTF 525

Query: 307 TSLISSLCQCG-KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             LIS   + G KL+E    F  M   +L P   +Y +++  + E G+  KA  L +EMV
Sbjct: 526 HPLISGCSKEGIKLKET--LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMV 583

Query: 366 SEGLKPST 373
             G++P  
Sbjct: 584 DMGVRPDN 591



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 182/397 (45%), Gaps = 42/397 (10%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           R    + ++FNTLI    K+   D+   + + M +    P+  T  +L+S LCK  +++ 
Sbjct: 130 RNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEE 189

Query: 77  YVDMLDRIHGKRCSPMV------------------------------------IVNTS-- 98
              ML+ I   +C+  V                                    I N +  
Sbjct: 190 ARCMLNEI---KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCS 246

Query: 99  -LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
            L+  + +E ++E+   +LK ++   ++   + Y+ IV    ++ +++ A++  E+M  R
Sbjct: 247 ILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   N   + + I  +CE   I++A   +++M   G+ P  ET+N+LI+G  +       
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRC 366

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
               E+M      P+  ++  +I  LC+ G   +A  +L   + +G  PN   Y+ LI G
Sbjct: 367 FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDG 426

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
               G+++E L+ + EM    I  T+  Y SLI  LC+ GKL+EA++ F ++ S    P 
Sbjct: 427 SCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPD 486

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           V  Y SL+  +   GN  K L L E M   GLKP+ +
Sbjct: 487 VITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 141/275 (51%), Gaps = 1/275 (0%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           ++  +++ ++ +  + L K M+      D + Y   + A VK+ +L+ A+ ++E M +R 
Sbjct: 37  IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK 96

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              N FVY   IG  C+  +I +A  L  EM    L P   TFN LI+G  KA  ++ ++
Sbjct: 97  VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAI 156

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              E+M   K+ PS   FN ++  LC+    ++A  ML      GF P+  TYS +  G 
Sbjct: 157 GLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGL 216

Query: 279 AKEGE-IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            K  +     L LY E   K +       + L++ LC+ GK+E+A++  K +  H LVPG
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             IY ++V  + + G+  +A+   E+M S GL+P+
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPN 311



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/390 (21%), Positives = 170/390 (43%), Gaps = 36/390 (9%)

Query: 29  LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR 88
           L+ V ++S  +  V  +Y  M +  R P+   +R ++ +L +  +    +D+   + G  
Sbjct: 2   LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
             P  +V    +L  ++   ++  M L + M R+ ++ +   Y++++    K + +  A 
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            ++ EM  R    N   + T I  YC+ G+++ A  L + M+   ++P   TFN L+ G 
Sbjct: 122 KLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGL 181

Query: 209 AKAKRIEESLSYCEQMMSRKLLP---------------------SCSAFNEMIRR----- 242
            KA+RIEE+     ++     +P                     +   + E I +     
Sbjct: 182 CKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKID 241

Query: 243 ----------LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
                     LC+ G  ++A  +L   ++ G  P E+ Y+ ++ GY + G++   +    
Sbjct: 242 NYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIE 301

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +ME + + P   A+ S+I   C+   +++A+++ K M    + P V+ Y  L+  +    
Sbjct: 302 QMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLC 361

Query: 353 NKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
             ++   + EEM   G KP+     S   C
Sbjct: 362 VFSRCFQILEEMEENGEKPNVISYGSLINC 391



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 169/370 (45%), Gaps = 3/370 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M++ + A +  + +  +G + S+ ++N LI    +       ++I + M EN   PN  +
Sbjct: 325 MQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVIS 384

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +LI+ LCK G++     +L  + G+   P   +   LI       ++ E +     M 
Sbjct: 385 YGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMS 444

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +  +    + Y+ ++    KM  L+ A  ++  +   G   +   Y + I  Y   G  +
Sbjct: 445 KNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQ 504

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAK-AKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +   L + M+  GLKP   TF+ LI GC+K   +++E+L    +M+   L P    +N M
Sbjct: 505 KCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLF--NEMLQMNLSPDRVVYNAM 562

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I    E G+ ++A  +    +D G  P+  TY+ LI G+ KEG++ E   L  +M+ K +
Sbjct: 563 IHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGL 622

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y+ LI   C       A  +++ M  +  +P V I   L     + G   +A  
Sbjct: 623 IPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQS 682

Query: 360 LCEEMVSEGL 369
           +C EM++ G+
Sbjct: 683 ICSEMIANGM 692



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 154/360 (42%), Gaps = 1/360 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E RG   + I+FN++I    +    D      + M+     P+  T   LI    +   
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                 +L+ +      P VI   SLI  + ++ +I E  ++L+ M+ + ++ +   Y++
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +  L  AL  ++EM K G  A    Y + I   C+ GK++EA  +   + + G
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N LI G + A   ++ L   E M    L P+ + F+ +I   C     K   
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKE 541

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L    SP+ + Y+ +I  Y + G +Q+   L  EM    + P    Y SLI   
Sbjct: 542 TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGH 601

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + GKL E       MK+  L+P  D Y  L+  H +  +   A     EM+  G  P+ 
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNV 661



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/402 (19%), Positives = 160/402 (39%), Gaps = 71/402 (17%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++A ++   +++R    ++  +N LI  + K  R     +++  M      PN  T  T
Sbjct: 82  LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNT 141

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK G++   + + +R+  ++  P +I   SL+  + +  RIEE   +L  +    
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNG 201

Query: 124 MIHDTIAYSLIVYAKVKMRN-LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            + D   YS+I    +K  +   +AL +Y E + +G   +++                  
Sbjct: 202 FVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNY------------------ 243

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                            T ++L+ G  K  ++E++    + ++   L+P    +N ++  
Sbjct: 244 -----------------TCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G+  +A   +     +G  PN I ++ +I  + +   I +  +   +M  K I+P+
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346

Query: 303 LPAYT-----------------------------------SLISSLCQCGKLEEADKYFK 327
           +  Y                                    SLI+ LC+ GK+ EA+   +
Sbjct: 347 VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            M    ++P  +IY  L+      G   +AL   +EM   G+
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGI 448



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 78/170 (45%)

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +L+  C+++K   +     + M     LPS      ++  L E         +    +  
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           GF P+++ Y   +    K G+++  ++L+  M+ + + P +  Y  LI  LC+  ++ +A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +K F  M   +LVP    + +L+  + + G    A+ L E M  E ++PS
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPS 170



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 1/190 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   ++ +F+ LI   +K     L   ++  ML+    P+      +I    + G 
Sbjct: 513 MKKLGLKPTINTFHPLISGCSKEGIK-LKETLFNEMLQMNLSPDRVVYNAMIHCYQETGH 571

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q    +   +      P      SLIL  ++E ++ E   L+  M  K +I +   YSL
Sbjct: 572 VQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSL 631

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +++   A V Y EML+ GF  N  +         + G+++EA  +  EM   G
Sbjct: 632 LIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691

Query: 194 LKPYDETFNL 203
           +   D   +L
Sbjct: 692 MDNLDTNEDL 701


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 12/344 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S  ++++N LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M   +  K CSP +I   +LI      +RI++GM LL  M    ++ DT  Y+ ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + +EM+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P  +T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGI 347
            Y +LI    + G +  A   F+ M S  + P  + I   L G+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ ++ +I  + K  R+     ++  M E   +P+  T  ++I   C  G+      +L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ SP V+   +LI   ++E +  E   L   ML + +I +TI YS ++    K 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++  M  +G S N   + T I  YC   +I++   L+ EM   GL     T+
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL--- 258
           N LI G      +  +L   ++M+S  L P     + ++  LC+ G  K A  M  +   
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 259 ---ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
               LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-----------GIHL---------- 349
             LC+  +L+EA + F  M S S  P V  + +L+           G+ L          
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 350 --------------EKGNKAKALHLCEEMVSEGLKPST 373
                         + GN   AL + +EM+S G+ P T
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 177/403 (43%), Gaps = 47/403 (11%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +++FNTL+H +   DR      ++  M E    PN  T  TL++ LC+ G++   
Sbjct: 144 GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYSLIVY 136
           V +LDR+      P  I   +++  + ++      + LL++M    ++I + + YS I+ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           +  K      A  ++ EM ++G   + F Y + I  +C  G+  +A  L+QEM    + P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI    K  +  E+    ++M+ R ++P+   ++ MI   C+      A  M 
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 257 TLALDKGFSPNEITYSHLIGGY--AKE--------------------------------- 281
            L   KG SPN IT++ LI GY  AK                                  
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK--------SH- 332
           G++   L L  EM    + P +    +L+  LC  GKL++A + FK+M+        SH 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 333 --SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              + P V  Y  L+   + +G   +A  L EEM   G+ P T
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEA 59
           R+ E    + R +E  G   + I++ T++  + K         + + M E + +  PN  
Sbjct: 199 RIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVV 256

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I +LCK G+     ++   +  K   P +    S+I+      R  +   LL+ M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + Y+ ++ A VK      A  +Y+EML RG   N+  Y++ I  +C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE----------------------- 216
           + A  +   M   G  P   TFN LI+G   AKRI++                       
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 217 ------------SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL------ 258
                       +L   ++M+S  L P     + ++  LC+ G  K A  M  +      
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 259 ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I  L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+  +L+EA + F  M S S  P V  + +L+  + + G     L L  EM   G+
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 156/354 (44%), Gaps = 1/354 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F  L+ VV + +R DLV  +YQ M       +  +   LI   C   +L   +   
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 137

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P V+   +L+  +  E+R+ E + L  +M       + + ++ ++    + 
Sbjct: 138 GKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-LKPYDET 200
             +  A+ + + M++ G       Y T +   C+ G    A  L+++ME    + P    
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I+   K  R  ++ +   +M  + + P    +N MI   C  G    A  +L   L
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  SP+ +TY+ LI  + KEG+  E  +LY EM  + I P    Y+S+I   C+  +L+
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            A+  F +M +    P +  + +L+  +         + L  EM   GL   T+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 1/301 (0%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  +D+   +   R  P V+    L+  +++ ER +  + L ++M RK +  D  ++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        L  AL  + ++ K G   +   + T +   C   ++ EA  L  +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   TF  L+ G  +  RI E+++  ++MM   L P+   +  ++  +C+ G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +L  +       PN + YS +I    K+G   +   L+ EM+ K I P L  Y S+I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G+  +A++  + M    + P V  Y +L+   +++G   +A  L +EM+  G+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 373 T 373
           T
Sbjct: 360 T 360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 11/254 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G      ++NTLIH        +    + Q M+ +   P+  T  TL+  LC  G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 74  LQTYVDM----------LDRIHG-KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L+  ++M          LD  H      P V     LI  +I E +  E   L + M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ DTI YS ++    K   L+ A  +++ M  + FS N   +TT I  YC+ G++++ 
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM   G+     T+  LI G  K   I  +L   ++M+S  + P       M+  
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 243 LCECGNAKQANGML 256
           L      K+A  ML
Sbjct: 661 LWSKEELKRAVAML 674



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 46/320 (14%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S +LI+FNTLI     + R D    +   M E     +  T  TLI      G 
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-----------K 122
           L   +D+L  +      P ++   +L+  +    ++++ + + K M +            
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++   +       A  +YEEM  RG   ++  Y++ I   C+  +++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +   M +    P   TF  LI G  KA R+++ L                 F EM RR
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL---------------FCEMGRR 610

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
                               G   N ITY  LI G+ K G I   L ++ EM    + P 
Sbjct: 611 --------------------GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 303 LPAYTSLISSLCQCGKLEEA 322
                ++++ L    +L+ A
Sbjct: 651 TITIRNMLTGLWSKEELKRA 670



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 35/177 (19%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG     I+++++I  + K  R D   +++  M      PN  T  TLI+  CK G 
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG- 595

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                                             R+++G+ L   M R+ ++ + I Y  
Sbjct: 596 ----------------------------------RVDDGLELFCEMGRRGIVANAITYIT 621

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++    K+ N+  AL +++EM+  G   ++      +       +++ A  ++++++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 12/344 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S  ++++N LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M   +  K CSP +I   +LI      +RI++GM LL  M    ++ DT  Y+ ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + +EM+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P  +T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGI 347
            Y +LI    + G +  A   F+ M S  + P  + I   L G+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ ++ +I  + K  R+     ++  M E   +P+  T  ++I   C  G+      +L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ SP V+   +LI   ++E +  E   L   ML + +I +TI YS ++    K 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++  M  +G S N   + T I  YC   +I++   L+ EM   GL     T+
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL--- 258
           N LI G      +  +L   ++M+S  L P     + ++  LC+ G  K A  M  +   
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 259 ---ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
               LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-----------GIHL---------- 349
             LC+  +L+EA + F  M S S  P V  + +L+           G+ L          
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 350 --------------EKGNKAKALHLCEEMVSEGLKPST 373
                         + GN   AL + +EM+S G+ P T
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 175/403 (43%), Gaps = 47/403 (11%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +++F TL+H +   DR       +  M E    PN  T  TL++ LC+ G++   
Sbjct: 144 GLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYSLIVY 136
           V +LDR+      P  I   +++  + ++      + LL++M    ++I + + YS I+ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           +  K      A  ++ EM ++G   + F Y + I  +C  G+  +A  L+QEM    + P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI    K  +  E+    ++M+ R ++P+   ++ MI   C+      A  M 
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 257 TLALDKGFSPNEITYSHLIGGY--AKE--------------------------------- 281
            L   KG SPN IT++ LI GY  AK                                  
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK--------SH- 332
           G++   L L  EM    + P +    +L+  LC  GKL++A + FK+M+        SH 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 333 --SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              + P V  Y  L+   + +G   +A  L EEM   G+ P T
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEA 59
           R+ E    + R +E  G   + I++ T++  + K         + + M E + +  PN  
Sbjct: 199 RIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVV 256

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I +LCK G+     ++   +  K   P +    S+I+      R  +   LL+ M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + Y+ ++ A VK      A  +Y+EML RG   N+  Y++ I  +C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE----------------------- 216
           + A  +   M   G  P   TFN LI+G   AKRI++                       
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 217 ------------SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL------ 258
                       +L   ++M+S  L P     + ++  LC+ G  K A  M  +      
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 259 ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I  L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+  +L+EA + F  M S S  P V  + +L+  + + G     L L  EM   G+
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 156/354 (44%), Gaps = 1/354 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F  L+ VV + +R DLV  +YQ M       +  +   LI   C   +L   +   
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTF 137

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P V+  T+L+  +  E+R+ E +    +M       + + ++ ++    + 
Sbjct: 138 GKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-LKPYDET 200
             +  A+ + + M++ G       Y T +   C+ G    A  L+++ME    + P    
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I+   K  R  ++ +   +M  + + P    +N MI   C  G    A  +L   L
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  SP+ +TY+ LI  + KEG+  E  +LY EM  + I P    Y+S+I   C+  +L+
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            A+  F +M +    P +  + +L+  +         + L  EM   GL   T+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 1/301 (0%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  +D+   +   R  P V+    L+  +++ ER +  + L ++M RK +  D  ++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        L  AL  + ++ K G   +   +TT +   C   ++ EA     +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   TF  L+ G  +  RI E+++  ++MM   L P+   +  ++  +C+ G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +L  +       PN + YS +I    K+G   +   L+ EM+ K I P L  Y S+I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G+  +A++  + M    + P V  Y +L+   +++G   +A  L +EM+  G+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 373 T 373
           T
Sbjct: 360 T 360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 11/254 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G      ++NTLIH        +    + Q M+ +   P+  T  TL+  LC  G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 74  LQTYVDM----------LDRIHG-KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L+  ++M          LD  H      P V     LI  +I E +  E   L + M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ DTI YS ++    K   L+ A  +++ M  + FS N   +TT I  YC+ G++++ 
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM   G+     T+  LI G  K   I  +L   ++M+S  + P       M+  
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 243 LCECGNAKQANGML 256
           L      K+A  ML
Sbjct: 661 LWSKEELKRAVAML 674



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 11/293 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S +LI+FNTLI     + R D    +   M E     +  T  TLI      G 
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-----------K 122
           L   +D+L  +      P ++   +L+  +    ++++ + + K M +            
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++   +       A  +YEEM  RG   ++  Y++ I   C+  +++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +   M +    P   TF  LI G  KA R+++ L    +M  R ++ +   +  +I  
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
             + GN   A  +    +  G  P+ IT  +++ G   + E++  + +  +++
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 12/344 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S  ++++N LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M   +  K CSP +I   +LI      +RI++GM LL  M    ++ DT  Y+ ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + +EM+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P  +T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGI 347
            Y +LI    + G +  A   F+ M S  + P  + I   L G+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ ++ +I  + K  R+     ++  M E   +P+  T  ++I   C  G+      +L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ SP V+   +LI   ++E +  E   L   ML + +I +TI YS ++    K 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++  M  +G S N   + T I  YC   +I++   L+ EM   GL     T+
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL--- 258
           N LI G      +  +L   ++M+S  L P     + ++  LC+ G  K A  M  +   
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 259 ---ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
               LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-----------GIHL---------- 349
             LC+  +L+EA + F  M S S  P V  + +L+           G+ L          
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 350 --------------EKGNKAKALHLCEEMVSEGLKPST 373
                         + GN   AL + +EM+S G+ P T
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 176/403 (43%), Gaps = 47/403 (11%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +++F TL+H +   DR      ++  M E    PN  T  TL++ LC+ G++   
Sbjct: 144 GLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYSLIVY 136
           V +LDR+      P  I   +++  + ++      + LL++M    ++I + + YS I+ 
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIID 263

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           +  K      A  ++ EM ++G   + F Y + I  +C  G+  +A  L+QEM    + P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI    K  +  E+    ++M+ R ++P+   ++ MI   C+      A  M 
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMF 383

Query: 257 TLALDKGFSPNEITYSHLIGGY--AKE--------------------------------- 281
            L   KG SPN IT++ LI GY  AK                                  
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK--------SH- 332
           G++   L L  EM    + P +    +L+  LC  GKL++A + FK+M+        SH 
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503

Query: 333 --SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              + P V  Y  L+   + +G   +A  L EEM   G+ P T
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEA 59
           R+ E    + R +E  G   + I++ T++  + K         + + M E + +  PN  
Sbjct: 199 RIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVV 256

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I +LCK G+     ++   +  K   P +    S+I+      R  +   LL+ M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + Y+ ++ A VK      A  +Y+EML RG   N+  Y++ I  +C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE----------------------- 216
           + A  +   M   G  P   TFN LI+G   AKRI++                       
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 217 ------------SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL------ 258
                       +L   ++M+S  L P     + ++  LC+ G  K A  M  +      
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 259 ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I  L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+  +L+EA + F  M S S  P V  + +L+  + + G     L L  EM   G+
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 157/354 (44%), Gaps = 1/354 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F  L+ VV + +R DLV  +YQ M       +  +   LI   C   +L   +   
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTF 137

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P V+  T+L+  +  E+R+ E + L  +M       + + ++ ++    + 
Sbjct: 138 GKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-LKPYDET 200
             +  A+ + + M++ G       Y T +   C+ G    A  L+++ME    + P    
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I+   K  R  ++ +   +M  + + P    +N MI   C  G    A  +L   L
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  SP+ +TY+ LI  + KEG+  E  +LY EM  + I P    Y+S+I   C+  +L+
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            A+  F +M +    P +  + +L+  +         + L  EM   GL   T+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 143/301 (47%), Gaps = 1/301 (0%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  +D+   +   R  P V+    L+  +++ ER +  + L ++M RK +  D  ++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        L  AL  + ++ K G   +   +TT +   C   ++ EA  L  +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   TF  L+ G  +  RI E+++  ++MM   L P+   +  ++  +C+ G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +L  +       PN + YS +I    K+G   +   L+ EM+ K I P L  Y S+I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G+  +A++  + M    + P V  Y +L+   +++G   +A  L +EM+  G+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 373 T 373
           T
Sbjct: 360 T 360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 11/254 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G      ++NTLIH        +    + Q M+ +   P+  T  TL+  LC  G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 74  LQTYVDM----------LDRIHG-KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L+  ++M          LD  H      P V     LI  +I E +  E   L + M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ DTI YS ++    K   L+ A  +++ M  + FS N   +TT I  YC+ G++++ 
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM   G+     T+  LI G  K   I  +L   ++M+S  + P       M+  
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 243 LCECGNAKQANGML 256
           L      K+A  ML
Sbjct: 661 LWSKEELKRAVAML 674



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 46/320 (14%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S +LI+FNTLI     + R D    +   M E     +  T  TLI      G 
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-----------K 122
           L   +D+L  +      P ++   +L+  +    ++++ + + K M +            
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++   +       A  +YEEM  RG   ++  Y++ I   C+  +++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +   M +    P   TF  LI G  KA R+++ L                 F EM RR
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL---------------FCEMGRR 610

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
                               G   N ITY  LI G+ K G I   L ++ EM    + P 
Sbjct: 611 --------------------GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 303 LPAYTSLISSLCQCGKLEEA 322
                ++++ L    +L+ A
Sbjct: 651 TITIRNMLTGLWSKEELKRA 670



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 35/177 (19%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG     I+++++I  + K  R D   +++  M      PN  T  TLI+  CK G 
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG- 595

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                                             R+++G+ L   M R+ ++ + I Y  
Sbjct: 596 ----------------------------------RVDDGLELFCEMGRRGIVANAITYIT 621

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++    K+ N+  AL +++EM+  G   ++      +       +++ A  ++++++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 191/407 (46%), Gaps = 37/407 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKS-------------------------- 36
           + E A ++ + +   G   SL++FNTLI++++K                           
Sbjct: 178 MVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYT 237

Query: 37  --------DRN-DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
                   +RN DL + ++  M++    PN  T  TLI+ LC  G++   +DML+ +  K
Sbjct: 238 SLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 297

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
              P V   T  I  +   E  EE + L+ RM ++    +   Y+ ++    ++  LE A
Sbjct: 298 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 357

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           + +Y +MLK G   N+  Y   I   C  G+   A  +   ME  G     +T+N +I+G
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                 IE+++   E+M+    LP+   +N +I      GN   A  +L L  + G  P+
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           E TY+ L+ G++K G+++     + EM    ++P   +YT+LI    + GK++ A    K
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGLKPST 373
            M+     P V+ Y +++   L K N+ ++A  +C++MV +GL P+ 
Sbjct: 538 RMEEMGCNPNVESYNAVIN-GLSKENRFSEAEKICDKMVEQGLLPNV 583



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 192/441 (43%), Gaps = 74/441 (16%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  ++AF V   + + G   + ++++TLI+ +    R D    + + M+E    P   T 
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              I+ALC     +  ++++ R+  + C P V   T+LI  + +  ++E  + L  +ML+
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366

Query: 122 KNMIHDTIAYSLIV------------------------YAKVKMRN-----------LES 146
           + ++ +T+ Y+ ++                         A  +  N           +E 
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAY--------------------CE----------- 175
           A+V++E+MLK G       Y T I  Y                    CE           
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486

Query: 176 ----YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
               +GK+E A+   QEM   GL P   ++  LI+G +K  +++ +LS  ++M      P
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNP 546

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +  ++N +I  L +     +A  +    +++G  PN ITY+ LI G  + G  Q   K++
Sbjct: 547 NVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 606

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
           ++ME +   P L  Y+SLI  LCQ GK +EA++    M      P +D Y +LV     K
Sbjct: 607 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRK 662

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
           G   +A  L ++M   G  P 
Sbjct: 663 GRFYEAEQLVKDMKERGFCPD 683



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 174/400 (43%), Gaps = 35/400 (8%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D    +   GF  SL S NTL+  + K +  +    +Y+ ML +   P+  T  TLI+ L
Sbjct: 149 DFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINIL 208

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
            K G+++    +L +I     SP V   TSLIL   +   ++    +  RM+++    ++
Sbjct: 209 SKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNS 268

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + YS ++        ++ AL + EEM+++G     + YT  I A C     EEA  L+  
Sbjct: 269 VTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR 328

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP----------------- 231
           M+  G +P  +T+  LI G ++  ++E ++    +M+   L+P                 
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 232 ------------------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
                             +   +NE+I+ LC  G+ ++A  +    L  G  P  +TY+ 
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI GY  +G +    +L   M+     P    Y  L+S   + GKLE A  YF+ M    
Sbjct: 449 LINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG 508

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L P    Y +L+  H + G    AL L + M   G  P+ 
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNV 548



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 174/435 (40%), Gaps = 66/435 (15%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            EVA  +   + + G   + +++N LI+ +    R     +I+  M  +    N  T   
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC GG ++  + + +++      P V+   +LI   + +  +     LL  M    
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D   Y+ +V    K   LESA   ++EM++ G + N   YT  I  + + GK++ A 
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM------------------ 225
            L++ ME  G  P  E++N +I G +K  R  E+   C++M+                  
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593

Query: 226 -----------------SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA----LD--- 261
                             RK LP+   ++ +I  LC+ G A +A  M  +     LD   
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYS 653

Query: 262 ------------------------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
                                   +GF P+   Y  L+  + K  E+   LK+++ +E K
Sbjct: 654 TLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 713

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
                L  Y +LI +LC+ G++EEA   F  M          ++  LV   L++G     
Sbjct: 714 GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLC 773

Query: 358 LHLCEEMVSEGLKPS 372
           + L   M S+   P+
Sbjct: 774 MKLLHIMESKNFTPN 788



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 147/314 (46%), Gaps = 1/314 (0%)

Query: 61  IRTLISALCKGGQ-LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           IR L+   C+  + ++   D L+ I G      +    +L++++ + E +E    L K+M
Sbjct: 130 IRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 189

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L   +    + ++ ++    K   +  A ++  ++ +   S + F YT+ I  +C    +
Sbjct: 190 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           + A  +   M   G  P   T++ LI G     R++E+L   E+M+ + + P+   +   
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC   + ++A  ++     +G  PN  TY+ LI G ++ G+++  + LY++M  + +
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y +LI+ LC  G+   A K F  M+ H  +     Y  ++      G+  KA+ 
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 360 LCEEMVSEGLKPST 373
           L E+M+  G  P+ 
Sbjct: 430 LFEKMLKMGPLPTV 443



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 150/346 (43%), Gaps = 44/346 (12%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N L+   +K  + +     +Q M+E    PN  +   LI    K G++   + +L R+
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C+P V    ++I  + +E R  E   +  +M+ + ++ + I Y+ ++    +    
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  ++ +M KR    N + Y++ I   C+ GK +EA    + M   G +P  +T++ L
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTL 655

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPS-------------------------------- 232
           + G  +  R  E+    + M  R   P                                 
Sbjct: 656 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 715

Query: 233 ---CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
               S +  +I  LC+ G  ++A  +    L+K ++ +EI ++ L+ G  KEGE+   +K
Sbjct: 716 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMK 775

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEE----ADKYFKIMKS 331
           L + ME K+ +P +  Y  L   L + GK  E    ADK  K++K 
Sbjct: 776 LLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADK-LKVLKD 820



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 4/246 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  +C  + ++G   ++I++ TLI  + ++ R    ++I+  M +    PN  T  +
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSS 623

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC+ G+     D  +R+    C P +   ++L+  + ++ R  E   L+K M  + 
Sbjct: 624 LIYGLCQEGK----ADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 679

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D   Y  ++ A  K   ++ AL ++  +  +GF  +  +Y   I A C+ G++EEA 
Sbjct: 680 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 739

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M        +  + +L++G  K   ++  +     M S+   P+   +  + R L
Sbjct: 740 ALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 799

Query: 244 CECGNA 249
              G +
Sbjct: 800 SRIGKS 805


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 180/383 (46%), Gaps = 2/383 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ A  + R +E  G +  L++FN LI+  ++       + ++ ++L+    PN  T+ T
Sbjct: 72  YQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTT 131

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  GQ+   +   D++         +   +LI  + +  +    + LL+R+  K 
Sbjct: 132 LIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKL 191

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ I+ +  K++ +  A  +Y EM+ +G S +   Y+  I  +C  GK+ +A 
Sbjct: 192 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAI 251

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M +  + P   TF++L++G  K  R++E+ +    MM + + P    +  ++   
Sbjct: 252 GLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGY 311

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  +       G + N  +Y+ +I G+ K  ++ E + L+ EM  K+I P +
Sbjct: 312 CLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDV 371

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SLI  LC+ GK+  A K    M    +      Y S++    +     KA+ L  +
Sbjct: 372 VTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 431

Query: 364 MVSEGLKPS--TSYLCSASTCRG 384
           M  EG++P   T  +     C+G
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKG 454



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 171/363 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++ +    +++ +NT+I  + K    +  + +Y  M+     P+  T   LIS
Sbjct: 180 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALIS 239

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+L   + + +++  +  +P V   + L+    +E R++E   +L  M+++ +  
Sbjct: 240 GFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP 299

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y  ++     ++ +  A  ++  M + G +AN   Y   I  +C+  K++EA  L 
Sbjct: 300 DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLF 359

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   T+N LI+G  K+ +I  +L   ++M  R +      +N ++  LC+ 
Sbjct: 360 KEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 419

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +LT   D+G  P+  TY+ LI G  K G +++   ++ ++  K  + T+  Y
Sbjct: 420 HQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTY 479

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +I   C     ++A      M+ +  +P    YE ++    EK     A  L  EM++
Sbjct: 480 TVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIA 539

Query: 367 EGL 369
            GL
Sbjct: 540 RGL 542



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 2/296 (0%)

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVL--LKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           H +  +P  I++TSL  ++    + +E  ++    R+L  N       +  I+ + VK+ 
Sbjct: 11  HFQFPNPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKIN 70

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
             ++A+ ++ EM   G +++   +   I  + + G    +  +   +   G +P   T  
Sbjct: 71  CYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLT 130

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            LI+G     +I ++L + +++++     +   +  +I  LC+ G    A  +L     K
Sbjct: 131 TLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGK 190

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              PN + Y+ +I    K   + E   LY EM  K ISP +  Y++LIS  C  GKL +A
Sbjct: 191 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDA 250

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
              F  M S  + P V  +  LV    ++G   +A ++   M+ +G+KP     CS
Sbjct: 251 IGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCS 306



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/321 (21%), Positives = 149/321 (46%), Gaps = 6/321 (1%)

Query: 44  RIYQHMLENIRYPNEATI--RTLISALCKGGQL--QTYVDMLDRIHGKRCSPMVIVNTSL 99
           R     + + ++PN   I   +L S L    Q    + V   +RI     +P +     +
Sbjct: 3   RFVPFSVSHFQFPNPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKI 62

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +  +++    +  + L + M    +  D + +++++    ++ +   +  V+  +LK+G+
Sbjct: 63  LGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGY 122

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             N+   TT I   C  G+I +A     ++   G       +  LI G  K  +   +L 
Sbjct: 123 EPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQ 182

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
              ++  + + P+   +N +I  +C+     +A  + +  + KG SP+ +TYS LI G+ 
Sbjct: 183 LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFC 242

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
             G++ + + L+ +M  + I+P +  ++ L+   C+ G+++EA     +M    + P V 
Sbjct: 243 ILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVV 302

Query: 340 IYESLVGIH--LEKGNKAKAL 358
            Y SL+  +  +++ NKAK++
Sbjct: 303 TYCSLMDGYCLVKQVNKAKSI 323


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 181/369 (49%), Gaps = 1/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ +F++   +++      L +++TLIH +  S   D   R+Y+ M EN   P+     T
Sbjct: 271 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 330

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++   + G+++  +++   +  + C  +V  N  LI  + +  +++E + + + +  K+
Sbjct: 331 MLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNI-LIRGLFENAKVDEAISIWELLPEKD 389

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D++ Y ++V+   K   L  AL + EE        ++F Y++ I   C  G+++E  
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 449

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ +M   G KP     N +I G  +A ++E++L +   M+S+   P+   +N +I  L
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 509

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +     +A  ++   L KG+ PN ITYS L+ G  +  ++   L L+ +   K   P +
Sbjct: 510 SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 569

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  +I  LC  GK+E+A + +  MK    VP +  + +L+    +  +  +A  + + 
Sbjct: 570 KMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDH 629

Query: 364 MVSEGLKPS 372
           ++  G +P 
Sbjct: 630 ILQYGPQPD 638



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 176/384 (45%), Gaps = 4/384 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A ++  ++ ++GFS  + S+ TLI+ + K+       +++  M E    P+ A    
Sbjct: 165 FDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 224

Query: 64  LISALCKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           LI    K G +    ++ +R+  G    P +     +I  + +  + +E   +  RM + 
Sbjct: 225 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 284

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D   YS +++      NL+ A  VY+EM + G S +  VY T +  Y   G+IEE 
Sbjct: 285 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 344

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L + ME  G +    ++N+LI G  +  +++E++S  E +  +        +  ++  
Sbjct: 345 LELWKVMEKEGCRTV-VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 403

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G   +A  +L  A +     +   YS +I G  +EG + EV  +  +M      P 
Sbjct: 404 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 463

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
                ++I+   +  KLE+A ++F  M S    P V  Y +L+    +    ++A  L +
Sbjct: 464 PHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVK 523

Query: 363 EMVSEGLKPS--TSYLCSASTCRG 384
           EM+ +G KP+  T  L     C+G
Sbjct: 524 EMLHKGWKPNMITYSLLMNGLCQG 547



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 1/268 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  L   +++++I+ + +  R D V  +   M ++   PN      +I+   +  +L+ 
Sbjct: 424 RG-DLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +     +  K C P V+   +LI  + + ER  E   L+K ML K    + I YSL++ 
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              + + L+ AL ++ + L++GF  +  ++   I   C  GK+E+A  L  EM+     P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T N L+EG  K +  E +    + ++     P   ++N  ++ LC C     A G L
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFL 662

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEI 284
             A+D+G  P  IT++ L+      G +
Sbjct: 663 NDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 156/348 (44%), Gaps = 1/348 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   ++ + +E+ G   +++S+N LI  + ++ + D    I++ + E     +  T   L
Sbjct: 342 EECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 400

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G L   + +L+     R        +S+I  + +E R++E   +L +M +   
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +    + ++   V+   LE AL  +  M+ +G       Y T I    +  +  EA  
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++EM + G KP   T++LL+ G  + K+++ +L+   Q + +   P     N +I  LC
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A  + +    +   PN +T++ L+ G+ K  + +   K++  +      P + 
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDII 640

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +Y   +  LC C ++ +A  +        ++P    +  LV   L+ G
Sbjct: 641 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 2/275 (0%)

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           E    T+I A  K       +D+  R+H    C P +    SL+  +I+  + +E     
Sbjct: 78  EDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
                  +  +   Y++++    + +  + A  +   M ++GFS + F Y T I +  + 
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSA 235
           G + +A  L  EM   G+ P    +N+LI+G  K   I  +    E+++    + P+  +
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N MI  LC+CG   ++  +           +  TYS LI G    G +    ++Y EM 
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 317

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
              +SP +  Y ++++   + G++EE  + +K+M+
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 37/246 (15%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           V  T I AY +    ++A  + Q M E  G +P   ++N L+    ++ + +E+ S+   
Sbjct: 80  VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 139

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
             +  L P+   +N +I+  C      +A  +L    ++GFSP+  +Y  LI   AK G 
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199

Query: 284 IQEVLKLYYEMEYK------------------------------------SISPTLPAYT 307
           + + LKL+ EM  +                                    S+ P +P+Y 
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            +I+ LC+CGK +E+ + +  MK +     +  Y +L+      GN   A  + +EM   
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 368 GLKPST 373
           G+ P  
Sbjct: 320 GVSPDV 325



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 100/226 (44%), Gaps = 2/226 (0%)

Query: 142 RNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           +N  SAL +++ + +  G+S   +V+   +    +   +   + +++ +     K  ++ 
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMS-RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
              +I+  AK    +++L   ++M       P   ++N ++  L E     +A       
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF 140

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
              G SPN  TY+ LI    ++ +  +  +L   M  +  SP + +Y +LI+SL + G +
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            +A K F  M    + P V  Y  L+    +KG+   A  + E ++
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLL 246



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/176 (14%), Positives = 77/176 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A+ + + +  +G+  ++I+++ L++ + +  + D+   ++   LE    P+      
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 574

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC  G+++  + +   +  ++C P ++ + +L+    +    E    +   +L+  
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 634

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
              D I+Y++ +        +  A+    + + RG    +  +   + A  + G +
Sbjct: 635 PQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           P ++  + +I  YAK     + L ++  M E     P + +Y SL+++L +  K +EA+ 
Sbjct: 77  PEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +F   ++  L P +  Y  L+ I   K    KA  L   M  +G  P  
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 166/347 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           + T++H + ++ R +    + +  + N   PN      LI   C  G+++  + + + + 
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           G RCSP V   T LI  + +  ++E  MVL  RM+   +  + + Y+ ++  +    +L+
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +   M   G   N + ++  I A C+  K+EEA   +  +   G+K  +  +  LI
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G  K  +I+ +    ++M+S   +P   +++ +I  LC      QA  ML   ++KG  
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + +TY+ +I    +E   +   K++ +M    I+P +  YT  + S C+ G++E+A+  
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M    + P +  Y +L+  +   G  ++A    E MV +G KP+
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN 526



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 166/347 (47%), Gaps = 8/347 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +++ +N LI     +   +   ++++ M  N   PN  T   LI  LCK G+++  
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +  R+      P V+  T+LI     E  ++    LL  M    ++ +   +S+++ A
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E A +    ++K+G   N  VYT+ I   C+ GKI+ A+ LMQ+M + G  P 
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF----NEMIRRLCECGNAKQAN 253
             +++ LI+G  + K++ ++    E MM + +  S   +    +E++R +   G  K  +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M+      G +P+ +TY+  +  Y +EG +++   +  +M  + + P L  Y +LI   
Sbjct: 447 KMIA----TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
              G + +A   F++M      P  D Y  L+ + ++K +   ++ +
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 143/316 (45%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N  T  TLI+A C  G +      L  +     +P     TS +L   +   +     + 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M  +  +     Y+ +++  +    +  A+ V+  M     + ++ VY T +   CE 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+ EEA  L++E  + G +P    +N LI+G   A  +E +L   E M   +  P+   +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
            E+I  LC+ G  ++A  + +  ++ G  PN +TY+ LI G   EG +Q   +L + ME 
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             + P    ++ LI +LC+  K+EEA  +   +    +     +Y SL+    + G    
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 357 ALHLCEEMVSEGLKPS 372
           A  L ++M+SEG  P 
Sbjct: 371 ADELMQKMISEGFVPD 386



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 142/317 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+     + +   C+ G L     +   +  + C       T+L+  ++    + E M +
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTV 164

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M   +   DT  Y+ +V+   +    E A V+ EE +  GF  N  VY   I  YC 
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++E A  + + M+     P   T+  LI G  K+ ++E ++    +M+   L P+   
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I+  C  G+ + A  +L L    G  PN+ T+S LI    K  +++E       + 
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K +      YTSLI  LC+ GK++ AD+  + M S   VP    Y SL+     +   +
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  + E+M+ +G++ S
Sbjct: 405 QATLMLEDMMEKGIQAS 421



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 35/256 (13%)

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP----YDE-------- 199
           E +  R  + N   YTT I AYC  G I  A   +  + +AGL P    Y          
Sbjct: 61  ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRA 120

Query: 200 -----------------------TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
                                  T+  L+ G   A  + E+++    M +    P    +
Sbjct: 121 GMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVY 180

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             M+  LCE G  ++A  +L  A+  GF PN + Y+ LI GY   GE++  LK++  M+ 
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
              SP +  YT LI  LC+ GK+E A   F  M    L P V  Y +L+     +G+   
Sbjct: 241 NRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 357 ALHLCEEMVSEGLKPS 372
           A  L   M + GL P+
Sbjct: 301 AFRLLHLMETNGLVPN 316



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/206 (17%), Positives = 92/206 (44%), Gaps = 12/206 (5%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   S +++  +I  + +   ++   +I+  M+     P+  T    + + C+ G+++
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M+ ++  +   P ++   +LI        + +     + M+ K    +  +Y++++
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534

Query: 136 YAKVK------------MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              VK            + +++   V+ E++ +R     + +Y+ FI   C   ++EEA 
Sbjct: 535 RLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAK 594

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCA 209
                M+NA L P ++ +  +I+ CA
Sbjct: 595 HFFMGMQNANLTPSEDVYTSIIDCCA 620



 Score = 37.7 bits (86), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 45/104 (43%)

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ LI  Y   G+I    +    + +  ++P   AYTS +   C+ G L  A + F +M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                +     Y +L+   L  G   +A+ +   M ++   P T
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDT 177


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 172/352 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG +   +++  LI+ + ++       R+ Q M +     +  T   LI   CK G+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     + +++  KR +P V+  T+L   + ++  +     LL  M  K +  +   Y+ 
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  NLE A+    +M + G   + + YTT IGA C+  +++ A+ L+QEM + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+N+L+ G   + R+E      E M+ + + P+ + +N ++++ C   N K   
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L +   PNE TY+ LI G+ K   ++E L  + EM  K    T  +Y +LI  L
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            +  K  EA + F+ M+   L    D+Y   + +   + N    L LC+E+V
Sbjct: 681 NKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 175/371 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +  RG  L+ +++ ++I ++    +     R+ + M+ +    + A   T
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++S  C+ G L    +  D +  +  +   +  T+LI  + +   ++E   +L+ M  K 
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y++++    K+  +  A +V+ +M+++  + N   YT      C+ G +  AN
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM + GL+    T+N LI G  KA  +E+++     M    L P    +  +I  L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A+ +L   LDKG  P  +TY+ L+ G+   G ++   +L   M  K+I P  
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SL+   C    ++   + +K M S  +VP  + Y  L+  H +  N  +AL+   E
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 364 MVSEGLKPSTS 374
           M+ +G + + S
Sbjct: 661 MIEKGFRLTAS 671



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N L+  +  + R     +++  M      P+  T   ++   C   +L+T + +L  +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +      +  TS+I  +  E ++ + + +++ M+   ++ D   ++ ++    +  +L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            +A   ++EM KRG +A+   YT  I   C  G+++EA  ++QEME+ GL     T+ +L
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K  ++ E+     +M+ +++ P+   +  +   LC+ G+   AN +L     KG 
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             N  TY+ LI G  K G +++ ++   +M+   + P +  YT++I +LCQ  +L+ A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + M    + P +  Y  L+      G       L E M+ + + P+T+
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 114/229 (49%), Gaps = 7/229 (3%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ +++E+ ++    N+  Y   + A C  G+I++A+ L  EM +    P   T+ +
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++ G      +E ++    +M +R L  +  A+  +I  LC+ G    A  ++   +  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              +   ++ ++ G+ ++G++      + EM+ + ++     YT+LI+ LC+ G+L+EA+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + M+   L      Y  L+  + + G   +A  +  +MV + + P+
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/223 (19%), Positives = 93/223 (41%), Gaps = 35/223 (15%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G   +++++N L++    S R +   R+ + MLE   +PN  T  +L+   C      
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI----- 612

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                                         E+ ++    + K ML + ++ +   Y++++
Sbjct: 613 ------------------------------EKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K RN++ AL  + EM+++GF   +  Y   I    +  K  EA  L ++M    L 
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLT 702

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
              + +N  I+       +E +L+ C++++   L+ S +  ++
Sbjct: 703 AEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDD 745


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 172/352 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG +   +++  LI+ + ++       R+ Q M +     +  T   LI   CK G+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     + +++  KR +P V+  T+L   + ++  +     LL  M  K +  +   Y+ 
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  NLE A+    +M + G   + + YTT IGA C+  +++ A+ L+QEM + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+N+L+ G   + R+E      E M+ + + P+ + +N ++++ C   N K   
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L +   PNE TY+ LI G+ K   ++E L  + EM  K    T  +Y +LI  L
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            +  K  EA + F+ M+   L    D+Y   + +   + N    L LC+E+V
Sbjct: 681 NKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 175/371 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +  RG  L+ +++ ++I ++    +     R+ + M+ +    + A   T
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++S  C+ G L    +  D +  +  +   +  T+LI  + +   ++E   +L+ M  K 
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y++++    K+  +  A +V+ +M+++  + N   YT      C+ G +  AN
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM + GL+    T+N LI G  KA  +E+++     M    L P    +  +I  L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A+ +L   LDKG  P  +TY+ L+ G+   G ++   +L   M  K+I P  
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SL+   C    ++   + +K M S  +VP  + Y  L+  H +  N  +AL+   E
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 364 MVSEGLKPSTS 374
           M+ +G + + S
Sbjct: 661 MIEKGFRLTAS 671



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N L+  +  + R     +++  M      P+  T   ++   C   +L+T + +L  +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +      +  TS+I  +  E ++ + + +++ M+   ++ D   ++ ++    +  +L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            +A   ++EM KRG +A+   YT  I   C  G+++EA  ++QEME+ GL     T+ +L
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K  ++ E+     +M+ +++ P+   +  +   LC+ G+   AN +L     KG 
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             N  TY+ LI G  K G +++ ++   +M+   + P +  YT++I +LCQ  +L+ A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + M    + P +  Y  L+      G       L E M+ + + P+T+
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 114/229 (49%), Gaps = 7/229 (3%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ +++E+ ++    N+  Y   + A C  G+I++A+ L  EM +    P   T+ +
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++ G      +E ++    +M +R L  +  A+  +I  LC+ G    A  ++   +  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              +   ++ ++ G+ ++G++      + EM+ + ++     YT+LI+ LC+ G+L+EA+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + M+   L      Y  L+  + + G   +A  +  +MV + + P+
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/223 (19%), Positives = 93/223 (41%), Gaps = 35/223 (15%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G   +++++N L++    S R +   R+ + MLE   +PN  T  +L+   C      
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI----- 612

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                                         E+ ++    + K ML + ++ +   Y++++
Sbjct: 613 ------------------------------EKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K RN++ AL  + EM+++GF   +  Y   I    +  K  EA  L ++M    L 
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
              + +N  I+       +E +L+ C++++   L+ S +  ++
Sbjct: 703 AEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDD 745


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 178/373 (47%), Gaps = 6/373 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIR--YPNEATI 61
           ++A  V     + G   +  S+N + H + +  R   V   +Q +L+  +R   P+  + 
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGR---VVEAHQLLLQMELRGCIPDVISY 291

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I+  C+ G+LQ  + +++ +  K   P       +IL + +  ++ E   +L+ M+ 
Sbjct: 292 STVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMIS 351

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  D + Y+ ++    K+ N+ SA  +++EM KR  S +   YT  I   C+ G++ E
Sbjct: 352 EGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME 411

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A+ L  EM    L+P + T+  LI+G  K  +++E+ S   QM+   L P+   +  +  
Sbjct: 412 ADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 471

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+CG    AN +L     KG   N  TY+ L+ G  K G I + +KL  +ME     P
Sbjct: 472 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 531

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               YT+L+ + C+  ++  A +  + M    L P V  +  L+      G       L 
Sbjct: 532 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 591

Query: 362 EEMVSEGLKPSTS 374
           + M+ +G+ P+ +
Sbjct: 592 KWMLEKGIMPNAT 604



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 167/361 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   +  ++N +I ++ K+ +     R+ + M+     P+     TLI   CK G 
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           + +   + D +  ++ SP  I  T++I  + Q  R+ E   L   M+ K +  D + Y+ 
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   ++ A  ++ +ML+ G + N   YT      C+ G+++ AN L+ EM   G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+    T+N L+ G  KA  I++++   + M      P    +  ++   C+     +A+
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   LD+   P  +T++ L+ G+   G +++  KL   M  K I P    Y SLI   
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C    +    + ++ M +  +VP  + Y  L+  H +  N  +A  L  +MV +G   + 
Sbjct: 614 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTV 673

Query: 374 S 374
           S
Sbjct: 674 S 674



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 177/356 (49%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++R  S   I++  +I  + ++ R     +++  M+     P+E T   LI   CK G+
Sbjct: 384 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 443

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    + +++     +P ++  T+L   + +   ++    LL  M RK +  +   Y+ 
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K  N++ A+ + ++M   GF  ++  YTT + AYC+  ++  A+ L+++M +  
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P   TFN+L+ G   +  +E+     + M+ + ++P+ + +N +I++ C   N +   
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      KG  P+  TY+ LI G+ K   ++E   L+ +M  K  + T+ +Y +LI   
Sbjct: 624 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 683

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +  K  EA + F+ M+   LV   +IY     I+ ++G     L LC+E + + L
Sbjct: 684 YKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 739



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 162/360 (45%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +   G +   + + TLI    K       +R++  M +    P+  T   +I  LC
Sbjct: 345 VLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 404

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G++     +   +  KR  P  +  T+LI    +E +++E   L  +ML+  +  + +
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 464

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ +     K   +++A  +  EM ++G   N + Y + +   C+ G I++A  LM++M
Sbjct: 465 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 524

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E AG  P   T+  L++   K++ +  +     QM+ R+L P+   FN ++   C  G  
Sbjct: 525 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 584

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           +    +L   L+KG  PN  TY+ LI  Y     ++   ++Y  M  K + P    Y  L
Sbjct: 585 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 644

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I   C+   ++EA    + M        V  Y +L+    ++    +A  L E+M  EGL
Sbjct: 645 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 704



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 163/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E RG    +IS++T+I+   +      V ++ + M      PN  T   +I  LCK G+
Sbjct: 279 MELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGK 338

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L  +  +  +P  ++ T+LI    +   +     L   M ++ +  D I Y+ 
Sbjct: 339 VAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTA 398

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +   +  A  ++ EM+ +    +   YT  I  YC+ GK++EA  L  +M   G
Sbjct: 399 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 458

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+  L +G  K   ++ +     +M  + L  +   +N ++  LC+ GN  QA 
Sbjct: 459 LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAV 518

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++      GF P+ +TY+ L+  Y K  E+    +L  +M  + + PT+  +  L++  
Sbjct: 519 KLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGF 578

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G LE+ +K  K M    ++P    Y SL+  +  + N      +   M ++G+ P 
Sbjct: 579 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD 637



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 138/271 (50%), Gaps = 1/271 (0%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV-YAKVKMRNLESALVVYEEMLKRGFSA 161
           +++   ++E   L  +ML   ++    + +L + +    +  ++ AL V+ E  + G   
Sbjct: 192 LVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCW 251

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           N+  Y     + C+ G++ EA+ L+ +ME  G  P   +++ +I G  +   ++  L   
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           E+M  + L P+   +N +I  LC+ G   +A  +L   + +G +P+ + Y+ LI G+ K 
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G +    +L+ EM+ + ISP    YT++I  LCQ G++ EADK F  M    L P    Y
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +L+  + ++G   +A  L  +M+  GL P+
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 4/233 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+  ++CR    +G  L++ ++N+L++ + K+   D   ++ + M     +P+  T  TL
Sbjct: 484 ELLHEMCR----KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + A CK  ++    ++L ++  +   P V+    L+        +E+G  LLK ML K +
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + +   Y+ ++       N+ +   +Y  M  +G   +   Y   I  +C+   ++EA  
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 659

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           L ++M   G      ++N LI+G  K K+  E+    EQM    L+     +N
Sbjct: 660 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 97/231 (41%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + +E  GF    +++ TL+    KS        + + ML+    P   T   L++
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 576

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G L+    +L  +  K   P      SLI +      +     + + M  K ++ 
Sbjct: 577 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 636

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    K RN++ A  ++ +M+ +GF+     Y   I  + +  K  EA  L 
Sbjct: 637 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 696

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++M   GL    E +N+  +      ++E +L  C++ + + L+      N
Sbjct: 697 EQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 12/344 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  S  ++++N LI+   K  +      +Y  ML     PN  T  ++I   CK  +L 
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M   +  K CSP +I   +LI      +RI++GM LL  M    ++ DT  Y+ ++
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +    + +L +AL + +EM+  G   +     T +   C+ GK+++A  + + M+ +   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P  +T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSPN +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGI 347
            Y +LI    + G +  A   F+ M S  + P  + I   L G+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 175/398 (43%), Gaps = 46/398 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ ++ +I  + K  R+     ++  M E   +P+  T  ++I   C  G+      +L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ SP V+   +LI   ++E +  E   L   ML + +I +TI YS ++    K 
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQ 373

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++  M  +G S N   + T I  YC   +I++   L+ EM   GL     T+
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL--- 258
           N LI G      +  +L   ++M+S  L P     + ++  LC+ G  K A  M  +   
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493

Query: 259 ---ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
               LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-----------GIHL---------- 349
             LC+  +L+EA + F  M S S  P V  + +L+           G+ L          
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613

Query: 350 --------------EKGNKAKALHLCEEMVSEGLKPST 373
                         + GN   AL + +EM+S G+ P T
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDT 651



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 179/407 (43%), Gaps = 47/407 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + G    +++FNTL+H +   DR      ++  M E    PN  T  TL++ LC+ G+
Sbjct: 140 LTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYS 132
           +   V +LDR+      P  I   +++  + ++      + LL++M    ++I + + YS
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I+ +  K      A  ++ EM ++G   + F Y + I  +C  G+  +A  L+QEM   
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P   T+N LI    K  +  E+    ++M+ R ++P+   ++ MI   C+      A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGY--AKE----------------------------- 281
             M  L   KG SPN IT++ LI GY  AK                              
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439

Query: 282 ----GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK------- 330
               G++   L L  EM    + P +    +L+  LC  GKL++A + FK+M+       
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499

Query: 331 -SH---SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            SH    + P V  Y  L+   + +G   +A  L EEM   G+ P T
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT 546



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEA 59
           R+ E    + R +E  G   + I++ T++  + K         + + M E + +  PN  
Sbjct: 199 RIVEAVALLDRMMED-GLQPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSHIIPNVV 256

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I +LCK G+     ++   +  K   P +    S+I+      R  +   LL+ M
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + Y+ ++ A VK      A  +Y+EML RG   N+  Y++ I  +C+  ++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE----------------------- 216
           + A  +   M   G  P   TFN LI+G   AKRI++                       
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436

Query: 217 ------------SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL------ 258
                       +L   ++M+S  L P     + ++  LC+ G  K A  M  +      
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496

Query: 259 ALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            LD      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I  L
Sbjct: 497 DLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+  +L+EA + F  M S S  P V  + +L+  + + G     L L  EM   G+
Sbjct: 557 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 156/354 (44%), Gaps = 1/354 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F  L+ VV + +R DLV  +YQ M       +  +   LI   C   +L   +   
Sbjct: 78  SVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 137

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P V+   +L+  +  E+R+ E + L  +M       + + ++ ++    + 
Sbjct: 138 GKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCRE 197

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-LKPYDET 200
             +  A+ + + M++ G       Y T +   C+ G    A  L+++ME    + P    
Sbjct: 198 GRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVI 257

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I+   K  R  ++ +   +M  + + P    +N MI   C  G    A  +L   L
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++  SP+ +TY+ LI  + KEG+  E  +LY EM  + I P    Y+S+I   C+  +L+
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            A+  F +M +    P +  + +L+  +         + L  EM   GL   T+
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 1/301 (0%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  +D+   +   R  P V+    L+  +++ ER +  + L ++M RK +  D  ++++
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        L  AL  + ++ K G   +   + T +   C   ++ EA  L  +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   TF  L+ G  +  RI E+++  ++MM   L P+   +  ++  +C+ G+   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +L  +       PN + YS +I    K+G   +   L+ EM+ K I P L  Y S+I  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G+  +A++  + M    + P V  Y +L+   +++G   +A  L +EM+  G+ P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 373 T 373
           T
Sbjct: 360 T 360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 11/254 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G      ++NTLIH        +    + Q M+ +   P+  T  TL+  LC  G+
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 74  LQTYVDM----------LDRIHG-KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L+  ++M          LD  H      P V     LI  +I E +  E   L + M  +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ DTI YS ++    K   L+ A  +++ M  + FS N   +TT I  YC+ G++++ 
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM   G+     T+  LI G  K   I  +L   ++M+S  + P       M+  
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 243 LCECGNAKQANGML 256
           L      K+A  ML
Sbjct: 661 LWSKEELKRAVAML 674



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 46/320 (14%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G S +LI+FNTLI     + R D    +   M E     +  T  TLI      G 
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-----------K 122
           L   +D+L  +      P ++   +L+  +    ++++ + + K M +            
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y++++   +       A  +YEEM  RG   ++  Y++ I   C+  +++EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +   M +    P   TF  LI G  KA R+++ L                 F EM RR
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLEL---------------FCEMGRR 610

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
                               G   N ITY  LI G+ K G I   L ++ EM    + P 
Sbjct: 611 --------------------GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 303 LPAYTSLISSLCQCGKLEEA 322
                ++++ L    +L+ A
Sbjct: 651 TITIRNMLTGLWSKEELKRA 670



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 35/177 (19%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG     I+++++I  + K  R D   +++  M      PN  T  TLI+  CK G 
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG- 595

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                                             R+++G+ L   M R+ ++ + I Y  
Sbjct: 596 ----------------------------------RVDDGLELFCEMGRRGIVANAITYIT 621

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++    K+ N+  AL +++EM+  G   ++      +       +++ A  ++++++
Sbjct: 622 LICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 172/360 (47%), Gaps = 5/360 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +  ++S+ T+I+   K   +   +  Y  ML+    P+  T  ++I+ALCKG  +   
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L  +      P     TS++       + +E +  LK++    +  D +   +  Y 
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYC 310

Query: 138 KV-KMRNLESALV----VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            + +    + ALV    + + M++ G   + +VY   I AY + GK++EA  +  +M   
Sbjct: 311 TLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           GL P   T+  +I    K+ R+E+++ Y EQM+   L P    +N +I  LC C   ++A
Sbjct: 371 GLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 430

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++   LD+G   N I ++ +I  + KEG + E  KL+  M    + P +  Y++LI  
Sbjct: 431 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDG 490

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  GK++EA K    M S  L P    Y +L+  + +      AL L +EM S G+ P 
Sbjct: 491 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 160/334 (47%), Gaps = 11/334 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            R  S  +++++++I  + K    D    +   M++N   PN  T  +++   C  GQ +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPK 283

Query: 76  TYVDMLDRIHGKRCSP----MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIA 130
             +  L ++      P      I     +L+    +    GM  L  ++ +N IH D   
Sbjct: 284 EAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYV 343

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y++++ A  K   ++ A++V+ +M ++G + ++  Y   IG  C+ G++E+A    ++M 
Sbjct: 344 YNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMI 403

Query: 191 NAGLKPYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           + GL P +  +N LI G   C K +R EE +    +M+ R +  +   FN +I   C+ G
Sbjct: 404 DEGLSPGNIVYNSLIHGLCTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSHCKEG 460

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              ++  +  L +  G  P+ ITYS LI GY   G++ E +KL   M    + P    Y 
Sbjct: 461 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYR 520

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           +LI+  C+  ++ +A   FK M+S  + P +  Y
Sbjct: 521 TLINGYCKISRMGDALVLFKEMESSGVSPDIITY 554



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 44/414 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M E    P+  +  
Sbjct: 103 LDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCT 162

Query: 63  TLISALCKGGQLQTYVD---MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
            L+  LC   + Q  ++   M+    G   +P V+  T++I    +E    +       M
Sbjct: 163 ILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEM 222

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + YS I+ A  K + ++ A+ V   M+K G   N   YT+ +  YC  G+ 
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQP 282

Query: 180 EEA----------------------------------------NCLMQEMENAGLKPYDE 199
           +EA                                        + L+  M   G+ P   
Sbjct: 283 KEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHY 342

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            +N+LI   AK  +++E++    +M  + L P    +  +I  LC+ G  + A       
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQM 402

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           +D+G SP  I Y+ LI G     + +   +L  EM  + I      + S+I S C+ G++
Sbjct: 403 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 462

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            E++K F +M    + P +  Y +L+  +   G   +A+ L   MVS GLKP+T
Sbjct: 463 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 516



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 147/325 (45%), Gaps = 4/325 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N LI    K  + D    ++  M +    P+  T   +I  LCK G+++  +   +++ 
Sbjct: 344 YNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMI 403

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  SP  IV  SLI  +    + E    L+  ML + +  +TI ++ I+ +  K   + 
Sbjct: 404 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 463

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   +   Y+T I  YC  GK++EA  L+  M + GLKP   T+  LI
Sbjct: 464 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLI 523

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+ ++L   ++M S  + P    +N +++ L +      A  +     + G  
Sbjct: 524 NGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 583

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     + L+++  +    +      +  +I +L + G+  EA   
Sbjct: 584 IELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDL 643

Query: 326 FKIMKSHSLVPGVDIY----ESLVG 346
           F    S+ LVP    Y    E+++G
Sbjct: 644 FVAFSSNGLVPNYWTYRLMAENIIG 668



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 144/324 (44%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M+ N  +P+      LI A  K G++   + +  ++  +  +P  +   ++I  + +  R
Sbjct: 332 MVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGR 391

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +E+ M+  ++M+ + +    I Y+ +++        E A  +  EML RG   N+  + +
Sbjct: 392 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 451

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I ++C+ G++ E+  L   M   G+KP   T++ LI+G   A +++E++     M+S  
Sbjct: 452 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG 511

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           L P+   +  +I   C+      A  +       G SP+ ITY+ ++ G  +        
Sbjct: 512 LKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 571

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +LY  +        L  Y  ++  LC+    ++A + F+ +    L      +  ++   
Sbjct: 572 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 631

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
           L+ G   +A  L     S GL P+
Sbjct: 632 LKVGRNGEAKDLFVAFSSNGLVPN 655



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 144/355 (40%), Gaps = 43/355 (12%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q+G +   +++  +I ++ KS R +     ++ M++    P      +LI  LC   +
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426

Query: 74  LQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
            +      ++MLDR     C   +  N S+I    +E R+ E   L   M+R  +  D I
Sbjct: 427 WERAEELILEMLDR---GICLNTIFFN-SIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 482

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            YS ++        ++ A+ +   M+  G   N+  Y T I  YC+  ++ +A  L +EM
Sbjct: 483 TYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEM 542

Query: 190 ENAGLKP----YD-------------------------------ETFNLLIEGCAKAKRI 214
           E++G+ P    Y+                                T+N+++ G  K K  
Sbjct: 543 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 602

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           +++L   + +    L      FN MI  L + G   +A  +       G  PN  TY  +
Sbjct: 603 DDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLM 662

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
                 +G ++E+ +L+  ME    +        ++  L Q G++  A  Y  ++
Sbjct: 663 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 717



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 14/238 (5%)

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG---LKPYDETF 201
           E A  V++E+L+RG  A+ +     +     +     A      M  AG   + P   T+
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            +LI  C +A R++   +    ++ +        F  +++ LC     K+ +  + + L 
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA---DKRTSDAMDIVLR 147

Query: 262 K----GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM---EYKSISPTLPAYTSLISSLC 314
           +       P+  + + L+ G   E   QE L+L + M        +P + +YT++I+   
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFF 207

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + G   +A   +  M    + P V  Y S++    +     KA+ +   MV  G+ P+
Sbjct: 208 KEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPN 265


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 178/369 (48%), Gaps = 2/369 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+++ N+L++     +R      +   M+E    P+  T  TL+  L +  +    
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V +++R+  K C P ++   ++I  + +    +  + LL +M +  +  D + YS ++ +
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R+++ AL ++ EM  +G   + F Y++ I   C YG+  +A+ L+ +M    + P 
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TFN LI+  AK  ++ E+    ++M+ R + P+   +N +I   C      +A  + T
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           L + K   P+ +TY+ LI G+ K  ++ + ++L+ +M  + +      YT+LI    Q  
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS--TSY 375
             + A   FK M S  + P +  Y +L+    + G   KA+ + E +    ++P   T  
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489

Query: 376 LCSASTCRG 384
           + S   C+ 
Sbjct: 490 IMSEGMCKA 498



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 176/372 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ F++       +E  G S +L ++N +I+ + +  +      I   M++    P+  T
Sbjct: 78  MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVT 137

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  +  T+L+  + Q  +  E + L++RM+
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    D + Y  ++    K    + AL +  +M K    A+  +Y+T I + C+Y  ++
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD 257

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  EM+N G++P   T++ LI       R  ++      M+ RK+ P+   FN +I
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   PN +TY+ LI G+     + E  +++  M  K   
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI+  C+  K+ +  + F+ M    LV     Y +L+    +  +   A  +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P+
Sbjct: 438 FKQMVSDGVHPN 449



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 171/352 (48%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F+ L+  + K  + DLV    + M       N  T   +I+ LC+  QL   + +L
Sbjct: 64  SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++   SL+       RI E + L+ +M+      DT+ ++ +V+   + 
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + E M+ +G   +   Y   I   C+ G+ + A  L+ +ME   ++     +
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + +I+   K + ++++L+   +M ++ + P    ++ +I  LC  G    A+ +L+  L+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +  +PN +T++ LI  +AKEG++ E  KL+ EM  +SI P +  Y SLI+  C   +L+E
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A + F +M S   +P V  Y +L+    +       + L  +M   GL  +T
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 168/362 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A ++   +E+      ++ ++T+I  + K    D    ++  M      P+  T  +L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LC  G+      +L  +  ++ +P V+   SLI    +E ++ E   L   M+++++
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ ++        L+ A  ++  M+ +    +   Y T I  +C+  K+ +   
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L ++M   GL     T+  LI G  +A   + +    +QM+S  + P+   +N ++  LC
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A  +          P+  TY+ +  G  K G++++   L+  +  K + P + 
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY ++IS  C+ G  EEA   F  MK    +P    Y +L+  HL  G+KA +  L +EM
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581

Query: 365 VS 366
            S
Sbjct: 582 RS 583



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 141/301 (46%), Gaps = 2/301 (0%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   VD+   +   R  P ++  + L+  I + ++ +  +   ++M    + H+   Y+
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +   L  AL +  +M+K G+  +     + +  +C   +I EA  L+ +M   
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   TF  L+ G  +  +  E+++  E+M+ +   P    +  +I  LC+ G    A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             +L   ++KG    + + YS +I    K   + + L L+ EM+ K I P +  Y+SLIS
Sbjct: 225 LNLLN-KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+  +A +    M    + P V  + SL+    ++G   +A  L +EM+   + P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343

Query: 372 S 372
           +
Sbjct: 344 N 344



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 109/239 (45%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ ++ EM+K     +   ++  + A  +  K +      ++ME  G+     T+N+
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I    +  ++  +L+   +MM     PS    N ++   C      +A  ++   ++ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           + P+ +T++ L+ G  +  +  E + L   M  K   P L  Y ++I+ LC+ G+ + A 
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
                M+   +   V IY +++    +  +   AL+L  EM ++G++P      S  +C
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 91/195 (46%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +RG   + +++ TLIH   ++   D    +++ M+ +  +PN  T  TL+  LCK 
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+L+  + + + +   +  P +     +   + +  ++E+G  L   +  K +  D IAY
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    K    E A  ++ +M + G   +S  Y T I A+   G    +  L++EM +
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583

Query: 192 AGLKPYDETFNLLIE 206
                   T+ L+ +
Sbjct: 584 CRFAGDASTYGLVTD 598



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 35/256 (13%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QR    +++++N+LI+     DR D   +I+  M+     P+  T  TLI+  CK  ++ 
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  +      +  T+LI    Q    +   ++ K+M+   +  + + Y+ ++
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457

Query: 136 YAKVKMRNLESALVVYEEMLK-----------------------------------RGFS 160
               K   LE A+VV+E + K                                   +G  
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            +   Y T I  +C+ G  EEA  L  +M+  G  P   T+N LI    +      S   
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577

Query: 221 CEQMMSRKLLPSCSAF 236
            ++M S +     S +
Sbjct: 578 IKEMRSCRFAGDASTY 593


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 175/370 (47%), Gaps = 2/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V   +   G     I++NT++  + K  R +    +   M     +PN  T   
Sbjct: 213 FGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNI 272

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   C+ G L+   ++++ +      P       +I    ++ RI E M L + M    
Sbjct: 273 LVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLK 332

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ ++    +  + E    + EEM  RG   NS  Y   +  + + GK++E +
Sbjct: 333 LSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVD 392

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             +++ME +G  P   T+N LI    K  +++E+    ++M  + L       N M+R L
Sbjct: 393 KTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRAL 452

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A+ +L  A  +G+  +E++Y  LI GY K  +  + L+L+ EM+ K I P++
Sbjct: 453 CRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSI 512

Query: 304 PAYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             Y S+I+ LCQ GK  +A DK  ++++S  LVP    Y +++  + ++G   KA     
Sbjct: 513 ITYNSMIAGLCQMGKTNQAIDKLDELLES-GLVPDEITYNTIIHGYCQEGQVEKAFQFHN 571

Query: 363 EMVSEGLKPS 372
           +MV +  KP 
Sbjct: 572 KMVEKNFKPD 581



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   ++ +G   +  +FN L+    +         + + M +N   P+  T   +IS
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G++   + + + +   + SP V+   +LI    +    EEG  L++ M  + M  
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +++ Y+++V   VK   ++       +M + G   +   Y T I  +C+ GK++EA  LM
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES----------------------------- 217
            EM   GLK  D T N ++    + ++++E+                             
Sbjct: 431 DEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKH 490

Query: 218 ------LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                 L   ++M  ++++PS   +N MI  LC+ G   QA   L   L+ G  P+EITY
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I GY +EG++++  + + +M  K+  P +    +L+  LC+ G LE+A K F    S
Sbjct: 551 NTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWIS 610

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                    Y +++    ++    +A  L EEM  + L P 
Sbjct: 611 KGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPD 651



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 156/322 (48%), Gaps = 2/322 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E  F +   +E RG   + +++N ++    K  + D V +  + M E+   P+  T  TL
Sbjct: 354 EEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTL 413

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII-QEERIEEGMVLLKRMLRKN 123
           IS  CK G++     ++D + G++   M  V  + +LR + +E +++E   LL    R+ 
Sbjct: 414 ISWHCKVGKMDEAFRLMDEM-GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D ++Y  ++    K      AL +++EM ++    +   Y + I   C+ GK  +A 
Sbjct: 473 YFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAI 532

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             + E+  +GL P + T+N +I G  +  ++E++  +  +M+ +   P     N ++  L
Sbjct: 533 DKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGL 592

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  +    + KG   + ++Y+ +I    KE    E   L  EME K + P  
Sbjct: 593 CKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDC 652

Query: 304 PAYTSLISSLCQCGKLEEADKY 325
             Y +++  L   G++++A+++
Sbjct: 653 YTYNAILGGLTDAGRMKDAEEF 674



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 3/309 (0%)

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLR 121
           I A    G+      + +R+      P ++   +L+   +R      I     +    ++
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  +T +++++++          A+ V  +M   G   ++  Y T +   C+ G++ E
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+ +M+N GL P   TFN+L+ GC +   ++E+ +  E M    ++P    +N MI 
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G   +A  +     +   SP+ +TY+ LI G  + G  +E  KL  EME + + P
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y  ++    + GK++E DK  + M+    +P +  Y +L+  H + G   +A  L 
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430

Query: 362 EEMVSEGLK 370
           +EM  +GLK
Sbjct: 431 DEMGRKGLK 439



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 3/230 (1%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK---IEEANCLMQEMENAGLKPYDETFNL 203
           A  ++  M + G         T + A   +     I  +  +  +    G+K    +FN+
Sbjct: 143 AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNI 202

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G     R  E++    +M      P    +N ++  LC+ G   +A  +L    +KG
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN  T++ L+ G  + G ++E   +   M   S+ P    Y  +IS  C+ G++ EA 
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +  + M++  L P V  Y +L+    E G+  +   L EEM   G+KP++
Sbjct: 323 RLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS 372



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 12/285 (4%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A D+     +RG+ +  +S+ TLI    K ++     R++  M E    P+  T 
Sbjct: 456 RKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITY 515

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            ++I+ LC+ G+    +D LD +      P  I   ++I    QE ++E+      +M+ 
Sbjct: 516 NSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVE 575

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           KN   D +  + ++    K   LE AL ++   + +G   ++  Y T I + C+  +  E
Sbjct: 576 KNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGE 635

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++EME   L P   T+N ++ G   A R++++    E+ +S K+     + N+ + 
Sbjct: 636 AFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA----EEFIS-KIAEKGKSENQFL- 689

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
              E G  + A    T  + +   PN I YS+ I     +G  ++
Sbjct: 690 ---ELGKRQDAR---TSEIPQEPHPNAIAYSNKINELCSQGRYKD 728


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 179/357 (50%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++ +FNTLI  + ++   + V      M E+   P+     T+I  +CK G  +  
Sbjct: 243 GCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 302

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+L R+      P V+   +++  +   ER EE   LL  M +++   D + ++++V  
Sbjct: 303 NDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDF 362

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +   ++  + + E+ML+ G   +   YTT I  +C+ G ++EA  L++ M   G KP 
Sbjct: 363 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 422

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++ ++++G  +A+R  ++      M+ +  LP+   FN +I  +C+ G  +QA  +L 
Sbjct: 423 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLK 482

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L  G SP+ I+YS +I G  K G+ +E L+L   M  K I+P    Y+S+ S+L + G
Sbjct: 483 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREG 542

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           + ++  + F  ++  ++     +Y +++    ++    +A+     MVS G  P+ S
Sbjct: 543 RTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 141/309 (45%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++SA+C+ G +   V++L ++    C P ++   +++  +   +R ++   L+  M+R  
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +   ++ ++    +    E       +M + G + +  +Y T I   C+ G  E AN
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 303

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M + GLKP    +N +++G   A+R EE+     +M           FN ++   
Sbjct: 304 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 363

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +   +L   L+ G  P+ ITY+ +I G+ KEG + E + L   M      P  
Sbjct: 364 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 423

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT ++  LC+  +  +A +    M     +P    + +L+    +KG   +A+ L ++
Sbjct: 424 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQ 483

Query: 364 MVSEGLKPS 372
           M+  G  P 
Sbjct: 484 MLVNGCSPD 492



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/362 (20%), Positives = 156/362 (43%), Gaps = 35/362 (9%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R L   G    ++S+N ++  +  + R D V  +   M+     PN AT  TLI+ LC+ 
Sbjct: 202 RKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRN 261

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G  +   + L ++    C+P + +  ++I  I ++   E    +L RM    +  + + Y
Sbjct: 262 GLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCY 321

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++         E A  +  EM +     +   +   +  +C+ G ++    L+++M  
Sbjct: 322 NTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 381

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G  P   T+  +I G  K   ++E++   + M +    P+  ++  +++ LC       
Sbjct: 382 HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVD 441

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +++  + +G  PN +T++ LI    K+G +++ ++L  +M     SP L +Y+++I 
Sbjct: 442 AQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 501

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            L + GK EEA                                   L L   M+++G+ P
Sbjct: 502 GLGKAGKTEEA-----------------------------------LELLNVMINKGITP 526

Query: 372 ST 373
           +T
Sbjct: 527 NT 528



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/370 (20%), Positives = 149/370 (40%), Gaps = 13/370 (3%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R L+  G +  ++++N +I    ++ +   V    +        PN  T   ++ +L
Sbjct: 62  DAARALDTAGDAAGVVAYNAMIAGYCRAGQ---VAAARRLAAAVPVPPNAYTYFPIVRSL 118

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEG-----MVLLKRMLRKN 123
           C  G +   + +LD +  + C+      T  +  +I E     G     +  L+ +  K 
Sbjct: 119 CARGLIADALTVLDEMPLRGCA-----ATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D+   +L+V A  +   ++  + +  ++   G   +   Y   +   C   + ++  
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            LM EM   G  P   TFN LI    +    E+      QM      P    +  +I  +
Sbjct: 234 ELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGI 293

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ + AN +L+     G  PN + Y+ ++ G       +E   L  EM  +      
Sbjct: 294 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD 353

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  L+   CQ G ++   +  + M  H  +P V  Y +++    ++G   +A+ L + 
Sbjct: 354 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKN 413

Query: 364 MVSEGLKPST 373
           M + G KP+T
Sbjct: 414 MSACGCKPNT 423



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 103/211 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   + IS+  ++  + +++R      +  HM++    PN  T  TLI+ +CK G ++  
Sbjct: 418 GCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQA 477

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L ++    CSP +I  +++I  + +  + EE + LL  M+ K +  +TI YS +  A
Sbjct: 478 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASA 537

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +    +  + +++ +      +++ +Y   I + C+  + + A      M + G  P 
Sbjct: 538 LSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 597

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           + T+ +LI G A    + E+     ++ SR+
Sbjct: 598 ESTYTILIRGLASEGLVREAQDLLSELCSRR 628


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 165/351 (47%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++S NT++    K    D+    +  M++N    +  +   L+  LC  G +   +   
Sbjct: 270 SIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFT 329

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +      P V+   +L    +    +     ++++ML + +  D + Y+ ++    +M
Sbjct: 330 DDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQM 389

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+E AL + +E L RGF  N   Y   +   C+ G+IEEA  L  EME   L+P    +
Sbjct: 390 GNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVY 449

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++LI G  K   ++ +    EQM  ++  P   A   ++  L + GN  +A         
Sbjct: 450 SILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTR 509

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                + + Y+ +I GY +   I E ++LYY+M  + I+P++  + +LI+  C+ G L E
Sbjct: 510 MDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLME 569

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A K  ++++   LVP V  Y +L+  + E GN  +  H   EM +  + P+
Sbjct: 570 ARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPT 620



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 172/354 (48%), Gaps = 2/354 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQ 75
           RGF L++I +N L+  + K  R +    ++  M E +R  P+      LI  LCK G +Q
Sbjct: 405 RGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEM-ETLRLEPDFIVYSILIHGLCKEGFVQ 463

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + +++  KR  P      +++L + +   I E         R +++ D + Y++++
Sbjct: 464 RAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMI 523

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              V++  +  A+ +Y +M++RG + +   + T I  +C  G + EA  +++ +   GL 
Sbjct: 524 DGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLV 583

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  L+    +   ++E   +  +M +  ++P+   +  +I+ LC      ++  +
Sbjct: 584 PSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQL 643

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     KG  P+ +TY+ +I  + K  EI + L+LY  M   +  PT   Y  LI++LC 
Sbjct: 644 LEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCI 703

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            G L++ D+    ++  ++      Y +++  H  KG  +KAL    +M+++G 
Sbjct: 704 FGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 2/360 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G    ++++NTL              ++ Q ML     P+  T  TLI   C+ G 
Sbjct: 332 MEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGN 391

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +      +     VI    L+  + +  RIEE + L   M    +  D I YS+
Sbjct: 392 IEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSI 451

Query: 134 IVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++   K   ++ A  +YE+M LKR F  +       +G + + G I EA          
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLF-KNGNISEARNYFDTWTRM 510

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            L      +N++I+G  +   I E++    +M+ R + PS   FN +I   C  G+  +A
Sbjct: 511 DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA 570

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ML +   KG  P+ +TY+ L+  Y + G +QE+    +EME  ++ PT   YT LI  
Sbjct: 571 RKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKG 630

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+  K+ E+ +  + M +  L+P    Y +++    +     KAL L   M+     P+
Sbjct: 631 LCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPT 690



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 138/280 (49%), Gaps = 10/280 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPNEATIRTLISALCKG 71
           +RG + S+++FNTLI+   +  R DL+    + MLE IR     P+  T  TL++A C+ 
Sbjct: 544 ERGITPSVVTFNTLINGFCR--RGDLMEA--RKMLEVIRLKGLVPSVVTYTTLMNAYCEV 599

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +Q     L  +      P  +  T LI  + ++ ++ E + LL+ M  K ++ D++ Y
Sbjct: 600 GNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTY 659

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + I+    K + +  AL +Y  ML          Y   I A C +G +++ + ++  +E+
Sbjct: 660 NTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719

Query: 192 AGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             +     T+  +I+  CAK + + ++L Y  QM+++  + S   ++ +I RLC+ G   
Sbjct: 720 RNITLKKXTYMTIIKAHCAKGQ-VSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLIT 778

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           +A     + L +G +P+      ++  + ++G    V + 
Sbjct: 779 EAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEF 818



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/402 (21%), Positives = 157/402 (39%), Gaps = 74/402 (18%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   ++   F  S+ ++N+L+H +  +D   ++W +Y  +  +    +E T   LI 
Sbjct: 189 ALFVIAKMKDLNFQASVPTYNSLLHNMRHTD---IMWDVYNEIKVSGAPQSECTTSILIH 245

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+  +L+  +  L   +      +V +NT      I  +  + G++            
Sbjct: 246 GLCEQSKLEDAISFLHDSNKVVGPSIVSINT------IMSKFCKVGLI------------ 287

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
                             + A   +  M+K G   +SF Y   +   C  G ++EA    
Sbjct: 288 ------------------DVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFT 329

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +ME  G++P   T+N L +G      +  +    ++M+ + L P    +  +I   C+ 
Sbjct: 330 DDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQM 389

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN ++A  +    L +GF  N I Y+ L+    K G I+E L L+ EME   + P    Y
Sbjct: 390 GNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVY 449

Query: 307 TSLISSLC-----------------------------------QCGKLEEADKYFKIMKS 331
           + LI  LC                                   + G + EA  YF     
Sbjct: 450 SILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTR 509

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+  V +Y  ++  ++     A+A+ L  +M+  G+ PS 
Sbjct: 510 MDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSV 551



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 114/269 (42%), Gaps = 22/269 (8%)

Query: 121 RKNMIHDTIAYSLIVYAKVK-----------------MRNLESALVVYEEMLKRGFSANS 163
           R  MIHD    +L V AK+K                 MR+ +    VY E+   G   + 
Sbjct: 182 RHEMIHD----ALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSE 237

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
              +  I   CE  K+E+A   + +  N  + P   + N ++    K   I+ + S    
Sbjct: 238 CTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCL 296

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   LL    ++N ++  LC  G+  +A G        G  P+ +TY+ L  G+   G 
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGL 356

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           +    K+  +M  + ++P L  YT+LI   CQ G +EEA K  +   S      V  Y  
Sbjct: 357 MSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNM 416

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+    + G   +AL L +EM +  L+P 
Sbjct: 417 LLSCLCKVGRIEEALTLFDEMETLRLEPD 445



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 8/276 (2%)

Query: 98  SLILRIIQEERIEEGMVLLKRMLRK--NMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
           S+I  +I ++ +    ++   +L K  N   + + + ++ +A  +   +  AL V  +M 
Sbjct: 138 SVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMK 197

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
              F A+   Y + +        + +   +  E++ +G    + T ++LI G  +  ++E
Sbjct: 198 DLNFQASVPTYNSLLHNMRHTDIMWD---VYNEIKVSGAPQSECTTSILIHGLCEQSKLE 254

Query: 216 ESLSYCEQMMSRKLL-PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           +++S+     S K++ PS  + N ++ + C+ G    A     L +  G   +  +Y+ L
Sbjct: 255 DAISFLHD--SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNIL 312

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           + G    G + E L    +ME   + P +  Y +L       G +  A K  + M    L
Sbjct: 313 LHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGL 372

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            P +  Y +L+  H + GN  +AL L +E +S G K
Sbjct: 373 NPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFK 408


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 176/381 (46%), Gaps = 5/381 (1%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y++Q    GF    ++F+T ++ + ++   D   ++   ML+    P+  T  T+I
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LC  G+L+    +++++    C P      +LI+ +  E ++EE + L + +  K + 
Sbjct: 344 NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLS 403

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +   +++++ A  K+ +   A+ ++EEM   G + +   Y   I   C  GK+ +A  L
Sbjct: 404 PNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDL 463

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++EME +G      T+N +I+G  K +RIEE+    +QM    +  +   FN +I  LC 
Sbjct: 464 LKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCN 523

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A  ++   + +G  PN +TY+ ++  Y K+G I +   +   M        +  
Sbjct: 524 AERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVT 583

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI+ LC+  + + A K  + M+   + P    Y  ++       N   AL L  EM 
Sbjct: 584 YATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMT 643

Query: 366 SEGLKPS--TSYLCSASTCRG 384
             G  P   T  +     CRG
Sbjct: 644 EVGGPPDAFTYKIVFRGLCRG 664



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 179/408 (43%), Gaps = 36/408 (8%)

Query: 1   MRLFEVAFD-VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA 59
           ++LF+ AFD V   L+  G   +   +N L+ V+ +  +  L+   Y  M      P+  
Sbjct: 138 LQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVV 197

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  T+I ALC+  Q +T V ML+ +     +P     T+L+   ++E  IE  + L  RM
Sbjct: 198 TFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARM 257

Query: 120 -----------------------------------LRKNMIHDTIAYSLIVYAKVKMRNL 144
                                              +      D + +S  V    +  ++
Sbjct: 258 SEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHV 317

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + AL V   ML+ G   + + Y+T I   C  G++EEA  ++ +M ++G  P   TFN L
Sbjct: 318 DHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTL 377

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I       ++EE+L    ++  + L P+   FN +I  LC+ G+   A  +       G 
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGC 437

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+E+TY+ LI      G++ + L L  EME      +   Y ++I  LC+  ++EEA++
Sbjct: 438 TPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEE 497

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            F  M    +      + +L+           A  L ++M+SEGL+P+
Sbjct: 498 VFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPN 545



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 1/315 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ R L  +G S ++ +FN LI+ + K     L  R+++ M  +   P+E T   
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+L   +D+L  +    C    +   ++I  + +  RIEE   +  +M    
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG 506

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I ++ ++        ++ A  + ++M+  G   N+  Y + +  YC+ G I +A 
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAA 566

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++Q M   G +    T+  LI G  KA+R + +L     M  + + P+  A+N +I+ L
Sbjct: 567 DILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSL 626

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
               N + A  +     + G  P+  TY  +  G  +  G I+E      EM      P 
Sbjct: 627 FRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPE 686

Query: 303 LPAYTSLISSLCQCG 317
             ++  L   L   G
Sbjct: 687 FSSFRMLAEGLLNLG 701



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 152/346 (43%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F TL+    +    +   R+   M E    P   T+  LI+  CK G++   +  + + 
Sbjct: 233 TFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQE 292

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P  +  ++ +  + Q   ++  + +L  ML++    D   YS ++        L
Sbjct: 293 IADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGEL 352

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  +  +M+  G   ++  + T I A C   ++EEA  L +E+   GL P   TFN+L
Sbjct: 353 EEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNIL 412

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    K      ++   E+M S    P    +N +I  LC  G   +A  +L      G 
Sbjct: 413 INALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGC 472

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             + +TY+ +I G  K   I+E  +++ +M+   I      + +LI  LC   ++++A +
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAE 532

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
               M S  L P    Y S++  + ++GN +KA  + + M + G +
Sbjct: 533 LVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFE 578



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 14/317 (4%)

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
           EA +R L SAL +   L    D+ + I  K  +        +++  ++ E  E G+ L++
Sbjct: 70  EAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQ 129

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
             +               YA++++ + ++  +V  ++   G  AN+ VY   +    E  
Sbjct: 130 SFIGS-------------YARLQLFD-DAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGS 175

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           KI+       EM + G++P   TFN +I+   +A++   ++   E+M S  + P  + F 
Sbjct: 176 KIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFT 235

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++    E G+ + A  +     + G SP  +T + LI GY K G + + L    +    
Sbjct: 236 TLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD 295

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
              P    +++ ++ LCQ G ++ A K   +M      P V  Y +++      G   +A
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355

Query: 358 LHLCEEMVSEGLKPSTS 374
             +  +MV  G  P T+
Sbjct: 356 KGIVNQMVDSGCLPDTT 372



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 9/273 (3%)

Query: 118 RMLRKNMIHDT-IAYSLIVYAKVKMRNLESA------LVVYEEMLKRGFSANSFVYTTFI 170
           RML   +  D  +  S  VY ++ +R L +A       V+  EM + G      +  +FI
Sbjct: 74  RMLNSALARDDGLTPSRDVYEEI-IRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFI 132

Query: 171 GAYCEYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           G+Y      ++A + +  +++  G++   E +N L+   A+  +I+   S   +M S+ +
Sbjct: 133 GSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGI 192

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P    FN +I  LC    A+ A  ML        +P+E T++ L+ G+ +EG I+  L+
Sbjct: 193 EPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALR 252

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L   M     SPT      LI+  C+ G++ +A  Y +   +    P    + + V    
Sbjct: 253 LKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLC 312

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
           + G+   AL +   M+ EG +P      +   C
Sbjct: 313 QNGHVDHALKVLGLMLQEGCEPDVYTYSTVINC 345



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 1/207 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A +V   ++  G   + I+FNTLI  +  ++R D    +   M+     PN  T 
Sbjct: 490 RRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTY 549

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            ++++  CK G +    D+L  +        V+   +LI  + +  R +  + LL+ M  
Sbjct: 550 NSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRM 609

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE-YGKIE 180
           K M     AY+ ++ +  +  N   AL ++ EM + G   ++F Y       C   G I+
Sbjct: 610 KGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIK 669

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEG 207
           EA   + EM + G  P   +F +L EG
Sbjct: 670 EAFDFLVEMADNGFIPEFSSFRMLAEG 696


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 166/347 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           + T++H + ++ R +    + +  + N   PN      LI   C  G+++  + + + + 
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           G RCSP V   T LI  + +  ++E  MVL  RM+   +  + + Y+ ++  +    +L+
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +   M   G   N + ++  I A C+  K+EEA   +  +   G+K  +  +  LI
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G  K  +I+ +    ++M+S   +P   +++ +I  LC      QA  ML   ++KG  
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + +TY+ +I    +E   +   K++ +M    I+P +  YT  + S C+ G++E+A+  
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M    + P +  Y +L+  +   G  ++A    E MV +G KP+
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN 526



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 166/347 (47%), Gaps = 8/347 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +++ +N LI     +   +   ++++ M  N   PN  T   LI  LCK G+++  
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +  R+      P V+  T+LI     E  ++    LL  M    ++ +   +S+++ A
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E A +    ++K+G   N  VYT+ I   C+ GKI+ A+ LMQ+M + G  P 
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF----NEMIRRLCECGNAKQAN 253
             +++ LI+G  + K++ ++    E MM + +  S   +    +E++R +   G  K  +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M+      G +P+ +TY+  +  Y +EG +++   +  +M  + + P L  Y +LI   
Sbjct: 447 KMIA----TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGY 502

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
              G + +A   F++M      P  D Y  L+ + ++K +   ++ +
Sbjct: 503 ANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 143/316 (45%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N  T  TLI+A C  G +      L  +     +P     TS +L   +   +     + 
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M  +  +     Y+ +++  +    +  A+ V+  M     + ++ VY T +   CE 
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+ EEA  L++E  + G +P    +N LI+G   A  +E +L   E M   +  P+   +
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
            E+I  LC+ G  ++A  + +  ++ G  PN +TY+ LI G   EG +Q   +L + ME 
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             + P    ++ LI +LC+  K+EEA  +   +    +     +Y SL+    + G    
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 357 ALHLCEEMVSEGLKPS 372
           A  L ++M+SEG  P 
Sbjct: 371 ADELMQKMISEGFVPD 386



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 142/317 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+     + +   C+ G L     +   +  + C       T+L+  ++    + E M +
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M   +   DT  Y+ +V+   +    E A V+ EE +  GF  N  VY   I  YC 
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++E A  + + M+     P   T+  LI G  K+ ++E ++    +M+   L P+   
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I+  C  G+ + A  +L L    G  PN+ T+S LI    K  +++E       + 
Sbjct: 285 YTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLV 344

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K +      YTSLI  LC+ GK++ AD+  + M S   VP    Y SL+     +   +
Sbjct: 345 KKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLS 404

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  + E+M+ +G++ S
Sbjct: 405 QATLMLEDMMEKGIQAS 421



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 35/256 (13%)

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP----YDE-------- 199
           E +  R  + N   YTT I AYC  G I  A   +  + +AGL P    Y          
Sbjct: 61  ESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRA 120

Query: 200 -----------------------TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
                                  T+  L+ G   A  + E+++    M +    P    +
Sbjct: 121 GMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVY 180

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             M+  LCE G  ++A  +L  A+  GF PN + Y+ LI GY   GE++  LK++  M+ 
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
              SP +  YT LI  LC+ GK+E A   F  M    L P V  Y +L+     +G+   
Sbjct: 241 NRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 357 ALHLCEEMVSEGLKPS 372
           A  L   M + GL P+
Sbjct: 301 AFRLLHLMETNGLVPN 316


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 1/356 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +++FN LIH + +        R+   +L+    PN  T+   I   C+   L   
Sbjct: 211 GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEA 270

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +LD + G+  +P VI   +LI  + +  ++ E    L++M+ +    D   Y+ I+  
Sbjct: 271 IRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDG 329

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  +++A  +  +   +GF  +   Y + I   C+ G I+ A  +  E    GLKP 
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPN 389

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
               N L++G ++   I ++L    +M      P    +N +I  LC+ G    A+ ++ 
Sbjct: 390 LVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVI 449

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
            A+ KG  P+  T++ LI GY K+ ++   +++   M    +SP +  Y S+++ LC+ G
Sbjct: 450 DAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG 509

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K E+    FK+M     VP +  Y  L     +     +AL+L EEM ++GL P  
Sbjct: 510 KYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDV 565



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 1/358 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG +  +I++NTLI  + K+ +        + M+     P+  T  ++I   CK G +Q 
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L     K   P      SLI  + Q+  I+  + +    + K +  + +  + +V 
Sbjct: 339 ADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVK 398

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +   +  AL +  EM + G S + + Y   I   C+ G + +A+ L+ +    G  P
Sbjct: 399 GLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLP 458

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TFN LI+G  K  +++ ++   ++M +  + P    +N ++  LC+ G  +   G  
Sbjct: 459 DVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTF 518

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            L ++KG  PN ITY+ L   + K  +++E L L  EM+ K ++P +  + +L+   C  
Sbjct: 519 KLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDN 578

Query: 317 GKLEEADKYFK-IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G L+ A + FK + + +     +  Y  ++     K N   A  L  +M   G  P +
Sbjct: 579 GDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDS 636



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 167/367 (45%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV   ++      S+ S+N +++++ +    D   ++Y  M +    P+  T    + 
Sbjct: 95  AVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMK 154

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           + C+  +      +L+ +  + C    +   ++I    +E    E   L + ML   +  
Sbjct: 155 SFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICP 214

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +A++ +++   +  +++ +  +  ++LKRG S N F    FI  +C+   + EA  L+
Sbjct: 215 DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLL 274

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             +   GL P   T+N LI G  K  ++ E+  Y  +M++    P    +N +I   C+ 
Sbjct: 275 DGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKL 333

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A+ +L     KGF P+E TY  LI G  ++G+I   + ++ E   K + P L   
Sbjct: 334 GMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLC 393

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +L+  L Q G + +A K    M  +   P +  Y  ++    + G  + A +L  + ++
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 367 EGLKPST 373
           +G  P  
Sbjct: 454 KGHLPDV 460



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 148/328 (45%), Gaps = 1/328 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+E+T  +LI+ LC+ G +   +++ +    K   P +++  +L+  + Q+  I + + L
Sbjct: 353 PDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKL 412

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  M       D   Y+L++    K+  +  A  +  + + +G   + F + T I  YC+
Sbjct: 413 MNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCK 472

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K++ A  ++  M N G+ P   T+N ++ G  KA + E+ +   + MM +  +P+   
Sbjct: 473 KLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIIT 532

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM- 294
           +N +    C+    ++A  ++    +KG +P+ + +  L+ G+   G++    +L+  + 
Sbjct: 533 YNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVD 592

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
           E    S T+  Y  +I++      +  A+K F  M  +   P    Y  ++    + GN 
Sbjct: 593 EQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNI 652

Query: 355 AKALHLCEEMVSEGLKPSTSYLCSASTC 382
                     + +GL PS +       C
Sbjct: 653 NSGYSFLLVKIEKGLIPSLTTFGRVLNC 680



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/356 (20%), Positives = 155/356 (43%), Gaps = 1/356 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF     ++ +LI+ + +    D    ++   +E    PN     TL+  L + G +  
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +++ +    CSP +     +I  + +   + +   L+   + K  + D   ++ ++ 
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   L++A+ + + M   G S +   Y + +   C+ GK E+     + M   G  P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N+L E   KA+++EE+L+  E+M ++ L P    F  +++  C+ G+   A  + 
Sbjct: 529 NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF 588

Query: 257 TLALDK-GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               ++  FS    TY+ +I  +A +  +    KL+ +M     SP    Y  +I   C+
Sbjct: 589 KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCK 648

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            G +     +  +     L+P +  +  ++     K    +A+ +   MV +G+ P
Sbjct: 649 TGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP 704



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 141/303 (46%), Gaps = 1/303 (0%)

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G++Q  VD+ +R+    C P V    +++  +++    ++   +  RM  K ++ D  
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            +++ + +  +     +A  +   M  +G  +++  Y T IG + E     EA+ L +EM
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G+ P    FN LI    +   ++ES     +++ R + P+    N  I+  C+    
Sbjct: 208 LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAML 267

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +L   + +G +P+ ITY+ LI G  K  ++ E      +M  +   P    Y S+
Sbjct: 268 NEAIRLLD-GVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I   C+ G ++ AD+  +       VP    Y SL+    + G+  +A+++  E + +GL
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386

Query: 370 KPS 372
           KP+
Sbjct: 387 KPN 389



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 1/333 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V     ++G   +L+  NTL+  +++        ++   M EN   P+  T   +I+
Sbjct: 374 AINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVIN 433

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G +    +++     K   P V    +LI    ++ +++  + ++ RM    +  
Sbjct: 434 GLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSP 493

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I Y+ I+    K    E  +  ++ M+++G   N   Y     ++C+  K+EEA  L+
Sbjct: 494 DVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLI 553

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCE 245
           +EM+N GL P    F  L++G      ++ +    +++  + K   + + +N MI     
Sbjct: 554 EEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAG 613

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             N   A  +     + GFSP+  TY  +I G+ K G I            K + P+L  
Sbjct: 614 KLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTT 673

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           +  +++ LC   ++ EA     +M    +VP V
Sbjct: 674 FGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV 706



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 1/271 (0%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           +I+E + + +RM   N      +Y+ I+   V+ R  + A  VY  M  +G   + + +T
Sbjct: 91  KIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFT 150

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             + ++C   +   A  L+  M + G +     +  +I G  +     E+    E+M+  
Sbjct: 151 IRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGL 210

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            + P   AFN++I  LC  G+ +++  +L   L +G SPN  T +  I G+ +   + E 
Sbjct: 211 GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEA 270

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           ++L   +  + ++P +  Y +LI  LC+  K+ EA+ Y + M +    P    Y S++  
Sbjct: 271 IRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDG 329

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           + + G    A  +  +   +G  P  S  CS
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCS 360



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/215 (20%), Positives = 95/215 (44%), Gaps = 4/215 (1%)

Query: 162 NSFVYTTFIGA---YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           N  +   +IGA   Y   GKI+EA  + + M+    +P  +++N ++    + +  +++ 
Sbjct: 72  NGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAH 131

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
               +M  + ++P    F   ++  C       A  +L     +G   + + Y  +IGG+
Sbjct: 132 KVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGF 191

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            +E    E  +L+ EM    I P + A+  LI +LC+ G ++E+++    +    + P +
Sbjct: 192 YEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNL 251

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                 +    ++    +A+ L +  V  GL P  
Sbjct: 252 FTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDV 285


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 179/396 (45%), Gaps = 39/396 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G S +L ++  +I  ++K+ R +   RI+  ML N   P+      LIS L K G+L 
Sbjct: 139 EKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLD 198

Query: 76  TYVDMLDRIHGKRCS----PMVIVNT---------------------------------- 97
             +  L+++    C+    P V+++                                   
Sbjct: 199 EALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFN 258

Query: 98  SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
            L+  + + ER EE +  +K+M  +        Y+ +V   +K+  L+ AL+  +E ++R
Sbjct: 259 PLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVER 318

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           GF  ++  YT+ I   C+ G++EE      EM N G +P   T+  LI+G  KAK I ++
Sbjct: 319 GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKA 378

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
                QM+    + S   +N ++  LC+ G   +A        ++G     +TYS L+ G
Sbjct: 379 HRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDG 438

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           +  EG +   ++L+  M  +   P L +Y  +I  LC+ GKL +A  YF+ +    L P 
Sbjct: 439 FCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPD 498

Query: 338 VDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPS 372
           V  + S + G+          + L E MVS+G  P+
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPN 534



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/432 (22%), Positives = 188/432 (43%), Gaps = 73/432 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L++   S  +++F  +I+ + +  R D  + + +  +     P+  T    I  LCK  +
Sbjct: 32  LDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAER 91

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L ++  K+C P  +  T+L+  +++  R++E M +L++M+ K        Y++
Sbjct: 92  VDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTV 151

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENA 192
           ++    K   +E A  ++ +ML  G   ++FVYT  I    + GK++EA   + +M EN 
Sbjct: 152 VIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENG 211

Query: 193 ---GLKP------------------------YDE----------TFNLLIEGCAKAKRIE 215
              G++P                        +DE          TFN L+    KA+R E
Sbjct: 212 CARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTE 271

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           E++++ ++M  R+  P+   +  ++    + G   +A   L  A+++GF P+ +TY+ +I
Sbjct: 272 EAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSII 331

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI------------------------- 310
            G  K G ++E  + ++EM  +   P    Y +LI                         
Sbjct: 332 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 391

Query: 311 ----------SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
                       LC+ G++ EA   F  M+    V  V  Y +L+     +GN + A+ L
Sbjct: 392 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 451

Query: 361 CEEMVSEGLKPS 372
              M+  G +P+
Sbjct: 452 FRRMLDRGCEPN 463



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 166/351 (47%), Gaps = 13/351 (3%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           E+R F  +L ++ +L+    K  R D      +  +E    P+  T  ++I  LCK G++
Sbjct: 282 ERRCFP-TLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRV 340

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +   +    +  +   P  +   +LI   ++ + I +   + ++ML+   +  T+ Y++I
Sbjct: 341 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 400

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K   +  A   +  M +RG  A    Y+  +  +C  G +  A  L + M + G 
Sbjct: 401 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 460

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE-CGNAKQAN 253
           +P   ++N++I G  +A ++ ++  Y E+++ R+L P    FN  +  LC+         
Sbjct: 461 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGV 520

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    + +G SPN  +YS L+ G  + G ++  L++++EM  + ++P +  + +LI  L
Sbjct: 521 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWL 580

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           C  G+++EA + F+ ++  S  P    Y SL+           AL  CE M
Sbjct: 581 CIAGRVDEALEVFRELERRS-APDAWSYWSLL----------DALSRCERM 620



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 153/315 (48%), Gaps = 8/315 (2%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++ LCK GQL   + +LD +    CSP ++  T +I  + +E+R++E   +L+R +R 
Sbjct: 14  ALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRA 70

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D + Y++ +    K   ++ A  + ++M ++     +  YT  +    + G+++EA
Sbjct: 71  GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++++M   G  P  +T+ ++I+G +KA R+EE+      M+     P    +  +I  
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190

Query: 243 LCECGNAKQA----NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           L + G   +A    N M+     +G  P+ + ++ +I      G +++ L  + E++  S
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELD-DS 249

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +  T   +  L+++LC+  + EEA  + K M      P +  Y SLV   L+ G   +AL
Sbjct: 250 LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEAL 309

Query: 359 HLCEEMVSEGLKPST 373
              +E V  G  P  
Sbjct: 310 LQLKEAVERGFIPDA 324



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 162/370 (43%), Gaps = 3/370 (0%)

Query: 9   DVCRYLEQRGFSLSL--ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           D   Y ++   SL L   +FN L+  + K++R +      + M E   +P   T  +L+ 
Sbjct: 238 DALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G+L   +  L     +   P  +  TS+I  + +  R+EEG      M  +    
Sbjct: 298 GFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 357

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++   +K + +  A  VY +ML+ G   ++  Y   +   C+ G++ EA    
Sbjct: 358 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 417

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             ME  G      T++ L++G      +  ++    +M+ R   P+  ++N +IR LC  
Sbjct: 418 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 477

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE-GEIQEVLKLYYEMEYKSISPTLPA 305
           G   +A       L +   P+  T++  + G  +    + + ++L+  M  +  SP L +
Sbjct: 478 GKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHS 537

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y+ L+  +C+ G LE   + F  M S  + P V ++ +L+      G   +AL +  E+ 
Sbjct: 538 YSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 597

Query: 366 SEGLKPSTSY 375
                 + SY
Sbjct: 598 RRSAPDAWSY 607



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 131/271 (48%), Gaps = 14/271 (5%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+ + ++ DT   + ++    K   L+ A+++ +EM     S +   +T  I   C   +
Sbjct: 1   MIDRKLV-DTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKR 56

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++EA  +++    AG +P   T+N+ I+G  KA+R++++    ++M  +K LP+   +  
Sbjct: 57  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++  L + G   +A  +L   ++KG SP   TY+ +I G +K G ++E  +++ +M    
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD----IYESLVGIHLEKGNK 354
             P    YT+LIS L + GKL+EA  Y   M  +    GV+    I+  ++      GN 
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236

Query: 355 AKALHLCEEMVSE------GLKPSTSYLCSA 379
             AL   +E+            P  + LC A
Sbjct: 237 EDALAYFDELDDSLDLTHFTFNPLVAALCKA 267


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 181/386 (46%), Gaps = 9/386 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPN 57
           R +E A ++   +  RG    ++++++ I    K  R    W+    +L +++     PN
Sbjct: 200 RQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSR----WKEAVGLLRSMKGQGVKPN 255

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
                  ISA  KGGQ +T VD+L  +     +P VI  +++I    +  + E    LL 
Sbjct: 256 VIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLM 315

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M  K ++ + I YS+++ A  K    E A+ +  EM + G + +   Y++ I A  + G
Sbjct: 316 EMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKG 375

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           + EEA  L++EM   G+ P   ++ ++I  CAK  R  E++   ++M +  + P    ++
Sbjct: 376 QWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYS 435

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
             I    +    +QA  +L      G +PN I+Y+  I   AK G  +  ++L  EM   
Sbjct: 436 AAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAH 495

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            ++P +  Y+++I+S     + EEA   F+ M+   + P V    + +    + G   +A
Sbjct: 496 GLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEA 555

Query: 358 LHLCEEMVSEGLKPST-SYLCSASTC 382
           L +  EM + GL P   SY  +   C
Sbjct: 556 LDVLGEMPTMGLVPDAISYRTAIDAC 581



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 158/345 (45%), Gaps = 5/345 (1%)

Query: 43  WR----IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           WR    +   M E    P+     + I+A     Q +  V++L  +  +   P V+  +S
Sbjct: 167 WRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSS 226

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
            I    +  R +E + LL+ M  + +  + I YS  + A  K    E+A+ + +EM   G
Sbjct: 227 AIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVG 286

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            + +   Y+T I A  + G+ E A  L+ EM   G+     T++++I  CAK  + EE++
Sbjct: 287 LAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAV 346

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           +   +M    + P    ++  I    + G  ++A G+L     +G +PN I+Y  +I   
Sbjct: 347 ALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISAC 406

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           AK G  +E + L  EM+   + P +  Y++ I +  Q  + E+A    + M +  L P V
Sbjct: 407 AKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNV 466

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLCSASTC 382
             Y S +    + G    A+ L  EM + GL P   +Y    ++C
Sbjct: 467 ISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASC 511



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 148/312 (47%), Gaps = 1/312 (0%)

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G  +  +D+LDR+  +   P     +S I       + E  + LL  M  +    D + Y
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S  + A  K+   + A+ +   M  +G   N  VY+  I A  + G+ E A  L++EM  
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL P   T++ +I+ CAK  + E +     +M ++ ++ +   ++ +I    + G  ++
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L    + G +P+ ITYS  I   AK+G+ +E + L  EM  + ++P   +Y  +IS
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           +  + G+  EA    + M++H + P V  Y + +    +     +AL L  EM + GL P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 372 ST-SYLCSASTC 382
           +  SY  +   C
Sbjct: 465 NVISYNSAIDAC 476



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 166/376 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E AF +   +  +G   ++I+++ +I    K  + +    + + M EN   P+  T  +
Sbjct: 307 WEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSS 366

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            ISA  K GQ +  V +L  +  +  +P  I    +I    +  R  E + LL+ M    
Sbjct: 367 TISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG 426

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D I YS  + A  +    E AL +  EM   G + N   Y + I A  + G+ + A 
Sbjct: 427 VPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAV 486

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM   GL P   T++ +I  CA  ++ EE+L    +M  + + P   + N  I   
Sbjct: 487 ELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINAC 546

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A  +L      G  P+ I+Y   I   AK    +E++ L  EM    ++P  
Sbjct: 547 AQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDA 606

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +Y   +S+    G  +EA    + M +  L P V  Y S +    + G   +A  L  +
Sbjct: 607 ISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQ 666

Query: 364 MVSEGLKPSTSYLCSA 379
           M + GL P  +   +A
Sbjct: 667 MPTFGLAPDVNSFNAA 682



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 172/382 (45%), Gaps = 3/382 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A  + R +++ G +  +I++++ I    K  + +    + + M      PN  +   
Sbjct: 342 WEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGI 401

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +ISA  K G+ +  +D+L  +      P VI  ++ I    Q  R E+ + LL+ M    
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATG 461

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK-IEEA 182
           +  + I+Y+  + A  K    + A+ +  EM   G + +   Y+  I A C  G+  EEA
Sbjct: 462 LTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI-ASCAMGRQWEEA 520

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM+  G+ P   + N  I  CA+    EE+L    +M +  L+P   ++   I  
Sbjct: 521 LDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA 580

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             +    K+   +L      G +P+ I+Y   +   + +G  +E L L  +M    +SP 
Sbjct: 581 CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPD 640

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y S I++  + G+ +EA    + M +  L P V+ + + +           A+ +  
Sbjct: 641 VVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLF 700

Query: 363 EMVSEGLKPS-TSYLCSASTCR 383
           EM + G+ P+  +YL +   C+
Sbjct: 701 EMRALGVSPNEATYLTAMYACK 722



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 138/318 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +  A D+ + ++  G    +I+++  I    ++ R +    + + M      PN  +  +
Sbjct: 412 WREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNS 471

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I A  K G+ +  V++L  +     +P VI  +++I       + EE + L + M R+ 
Sbjct: 472 AIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQG 531

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D ++ +  + A  +    E AL V  EM   G   ++  Y T I A  +  + +E  
Sbjct: 532 ITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEII 591

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM   GL P   ++   +  C+     +E+L     M++  L P    +N  I   
Sbjct: 592 DLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINAC 651

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  K+A  +L      G +P+  +++  I       +    +++ +EM    +SP  
Sbjct: 652 AKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNE 711

Query: 304 PAYTSLISSLCQCGKLEE 321
             Y + + +  +CG+ ++
Sbjct: 712 ATYLTAMYACKRCGEKDD 729



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 1/209 (0%)

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           +YG   +A  ++  M+  G+KP  + ++  I  C  A++ E ++     M +R   P   
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            ++  I    +    K+A G+L     +G  PN I YS  I    K G+ +  + L  EM
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
               ++P +  Y+++I +  + G+ E A +    M +  +V  +  Y  ++G   + G  
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQW 342

Query: 355 AKALHLCEEMVSEGLKPST-SYLCSASTC 382
            +A+ L  EM   G+ P   +Y  + S C
Sbjct: 343 EEAVALLREMQENGVAPDVITYSSTISAC 371



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 61/138 (44%)

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           S     +R   + G+ ++A  +L    ++G  P+   YS  I       + +  ++L   
Sbjct: 152 SHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLAS 211

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M  +   P +  Y+S I++  +  + +EA    + MK   + P V +Y + +    + G 
Sbjct: 212 MAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQ 271

Query: 354 KAKALHLCEEMVSEGLKP 371
              A+ L +EM + GL P
Sbjct: 272 WETAVDLLKEMPAVGLAP 289


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G   +++S+N +I    +    D+   ++  ML     PN  T   LI    K G  +
Sbjct: 457 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 516

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +D+ D++     +P      ++I  + +  ++ E    LK  L +  I   + Y+ IV
Sbjct: 517 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 576

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              +K  N++SAL VY EM + G S N   YT+ I  +C+  +I+ A     EM   GL+
Sbjct: 577 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 636

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                ++ LI+G  K + +E +     +++   L P+   +N MI    +  N + A   
Sbjct: 637 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 696

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               ++     +  TY+ LI G  KEG +     LY EM  K I P +  +  L++ LC 
Sbjct: 697 YKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCN 756

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G+LE A K  + M   ++ P V IY +L+  +  +GN  +A  L +EM+  GL P 
Sbjct: 757 KGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 813



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 1/355 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++L+   +L+         D    ++  + E+  +PN+ T   LI   C  G ++  
Sbjct: 320 GKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA 379

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++  ++      P V    SL+   ++    EE   L    +    + +   Y++++  
Sbjct: 380 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSW 438

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A  + + M+ +G   N   Y   I  +C  G ++ A+ +  +M    LKP 
Sbjct: 439 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 498

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI+G  K    E++L   +QM+S  + P+   FN +I  LC+ G   +A   L 
Sbjct: 499 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 558

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L++GF P+ +TY+ ++ G+ KEG I   L +Y EM    +SP +  YTSLI+  C+  
Sbjct: 559 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 618

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +++ A K    M+   L   V  Y +L+    ++ +   A  L  E++  GL P+
Sbjct: 619 RIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPN 673



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 162/344 (47%), Gaps = 34/344 (9%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I A+CK       +++L+ +  +   P     TS+I+  + +  + E + L + M+   
Sbjct: 261 IIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG 320

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + +  + ++       NL+SAL ++ ++ + G   N   Y+  I   C  G IE+A+
Sbjct: 321 KPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKAS 380

Query: 184 CLMQEMENAGLKP------------------------YDE----------TFNLLIEGCA 209
            L  +M+  G+ P                        +DE          T+N+++    
Sbjct: 381 ELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLC 440

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  +++E+ S  + M+++ ++P+  ++N+MI   C  GN   A+ + +  L +   PN +
Sbjct: 441 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVV 500

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TYS LI G  K+G+ ++ L L+ +M   +I+PT   + ++I+ LC+ G++ EA    K  
Sbjct: 501 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 560

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                +P    Y S+V   +++GN   AL +  EM   G+ P+ 
Sbjct: 561 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 604



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 152/343 (44%), Gaps = 35/343 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  V   +  R    ++++++ LI    K   ++    ++  ML     P + T  T+
Sbjct: 481 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 540

Query: 65  ISALCKGGQLQ-------------------TYVDMLD------------RIHGKRC---- 89
           I+ LCK GQ+                    TY  ++D             ++ + C    
Sbjct: 541 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 600

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           SP V+  TSLI    +  RI+  +     M  K +  D  AYS ++    K R++ESA  
Sbjct: 601 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 660

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++ E+L+ G S N  VY + I  + +   +E A    ++M N  +     T+  LI+G  
Sbjct: 661 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 720

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  R+  +     +M+S+ ++P    F+ ++  LC  G  + A  +L     K  +P+ +
Sbjct: 721 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 780

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            Y+ LI GY +EG ++E   L+ EM  + + P    Y  LI+ 
Sbjct: 781 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 127/274 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D  +   + GF  S +++N+++    K    D    +Y+ M E    PN  T  +LI+
Sbjct: 553 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 612

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK  ++   +   D +  K     V   ++LI    +   +E    L   +L   +  
Sbjct: 613 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSP 672

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y+ ++     + N+E+ALV Y++M+      +   YTT I    + G++  A+ L 
Sbjct: 673 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 732

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+ P   TF++L+ G     ++E +    E+M  + + PS   +N +I      
Sbjct: 733 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 792

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
           GN K+A  +    LD+G  P+++TY  LI G  K
Sbjct: 793 GNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 146/344 (42%), Gaps = 34/344 (9%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++A  +  +++  +D  + +  +   P V     L+  +++   I E   L  +M+ + 
Sbjct: 156 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 215

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D     ++V A +K   +E A   + E  +RG   ++  Y+  I A C+        
Sbjct: 216 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 275

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM+  G  P + TF  +I  C     + E+L   E+M++     +      +++  
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 335

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  GN   A  +     + G  PN++TYS LI G    G I++  +LY +M+   I P++
Sbjct: 336 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 395

Query: 304 -------------P---------------------AYTSLISSLCQCGKLEEADKYFKIM 329
                        P                      Y  ++S LC+ GK++EA      M
Sbjct: 396 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNM 455

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  +VP V  Y  ++  H  KGN   A  +  +M++  LKP+ 
Sbjct: 456 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 499



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 1/282 (0%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           I+  RIE  +     M+ +++I      ++++ A V+   +     +Y +M+ RG   + 
Sbjct: 161 IRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDH 220

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           F     + A  + G++EEA    +E +  G+K     ++++I+   K       L   E+
Sbjct: 221 FTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEE 280

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M  R  +PS + F  +I      GN  +A  +    ++ G   N +  + L+ GY  +G 
Sbjct: 281 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 340

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           +   L L+ ++    + P    Y+ LI   C  G +E+A + +  MK + + P V    S
Sbjct: 341 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 400

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY-LCSASTCRG 384
           L+  +L+     +A  L +E V  G+    +Y +  +  C+G
Sbjct: 401 LLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKG 442



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 92/200 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G  L + +++ LI    K    +    ++  +LE    PN     ++IS       
Sbjct: 630 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +    ++   R    +   T+LI  +++E R+     L   ML K ++ D I + +
Sbjct: 690 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 749

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V        LE+A  + EEM ++  + +  +Y T I  Y   G ++EA  L  EM + G
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809

Query: 194 LKPYDETFNLLIEGCAKAKR 213
           L P D T+++LI G  K  R
Sbjct: 810 LVPDDVTYDILINGKFKGDR 829



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 96/250 (38%), Gaps = 35/250 (14%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEA-NC--------------------------------- 184
           F  +  V+   + AY    +IE A +C                                 
Sbjct: 146 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 205

Query: 185 -LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M   G+     T ++++  C K  R+EE+  Y  +   R +     A++ +I+ +
Sbjct: 206 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 265

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+  N+     +L    ++G+ P+E T++ +I     +G + E L+L  EM        L
Sbjct: 266 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNL 325

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
              TSL+   C  G L+ A   F  +    L P    Y  L+      GN  KA  L  +
Sbjct: 326 VVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ 385

Query: 364 MVSEGLKPST 373
           M   G+ PS 
Sbjct: 386 MKLNGIPPSV 395


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 172/352 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG +   +++  LI+ + ++       R+ Q M +     +  T   LI   CK G+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     + +++  KR +P V+  T+L   + ++  +     LL  M  K +  +   Y+ 
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  NLE A+    +M + G   + + YTT IGA C+  +++ A+ L+QEM + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+N+L+ G   + R+E      E M+ + + P+ + +N ++++ C   N K   
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L +   PNE TY+ LI G+ K   ++E L  + EM  K    T  +Y +LI  L
Sbjct: 621 EIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            +  K  EA + F+ M+   L    D+Y   + +   + N    L LC+E+V
Sbjct: 681 NKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 175/371 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +  RG  L+ +++ ++I ++    +     R+ + M+ +    + A   T
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++S  C+ G L    +  D +  +  +   +  T+LI  + +   ++E   +L+ M  K 
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y++++    K+  +  A +V+ +M+++  + N   YT      C+ G +  AN
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM + GL+    T+N LI G  KA  +E+++     M    L P    +  +I  L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A+ +L   LDKG  P  +TY+ L+ G+   G ++   +L   M  K+I P  
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SL+   C    ++   + +K M S  +VP  + Y  L+  H +  N  +AL+   E
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 364 MVSEGLKPSTS 374
           M+ +G + + S
Sbjct: 661 MIEKGFRLTAS 671



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N L+  +  + R     +++  M      P+  T   ++   C   +L+T + +L  +
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +      +  TS+I  +  E ++ + + +++ M+   ++ D   ++ ++    +  +L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            +A   ++EM KRG +A+   YT  I   C  G+++EA  ++QEME+ GL     T+ +L
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K  ++ E+     +M+ +++ P+   +  +   LC+ G+   AN +L     KG 
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             N  TY+ LI G  K G +++ ++   +M+   + P +  YT++I +LCQ  +L+ A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + M    + P +  Y  L+      G       L E M+ + + P+T+
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 114/229 (49%), Gaps = 7/229 (3%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ +++E+ ++    N+  Y   + A C  G+I++A+ L  EM +    P   T+ +
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGI 290

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++ G      +E ++    +M +R L  +  A+  +I  LC+ G    A  ++   +  G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              +   ++ ++ G+ ++G++      + EM+ + ++     YT+LI+ LC+ G+L+EA+
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + M+   L      Y  L+  + + G   +A  +  +MV + + P+
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/223 (19%), Positives = 93/223 (41%), Gaps = 35/223 (15%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G   +++++N L++    S R +   R+ + MLE   +PN  T  +L+   C      
Sbjct: 558 DKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI----- 612

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                                         E+ ++    + K ML + ++ +   Y++++
Sbjct: 613 ------------------------------EKNMKSTTEIYKGMLSQEVVPNENTYNILI 642

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K RN++ AL  + EM+++GF   +  Y   I    +  K  EA  L ++M    L 
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
              + +N  I+       +E +L+ C++++   L+ S +  ++
Sbjct: 703 AEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDD 745


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 171/359 (47%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
            +E +G++  +IS++T+I+   +    D VW++ + M +    PN  T  ++I  LC+  +
Sbjct: 695  MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICK 754

Query: 74   LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            L    +    + G+   P  IV T+L+    +   I         M  +++  D + Y+ 
Sbjct: 755  LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814

Query: 134  IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            I+    ++ ++  A  ++ EML RG   +   +T  +  YC+ G I++A  +   M  AG
Sbjct: 815  IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874

Query: 194  LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
              P   T+  LI+G  K   ++ +     +M    L P+   +N ++  LC+ GN ++A 
Sbjct: 875  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934

Query: 254  GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             ++      G + + +TY+ L+  Y K GE+ +  ++  EM  K + PT+  +  L++  
Sbjct: 935  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF 994

Query: 314  CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G LE+ +K    M +  + P    +  LV  +  + N   A  + ++M S G++P 
Sbjct: 995  CLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 175/377 (46%), Gaps = 11/377 (2%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A  V R   + G   ++ S+N +IH V +  R +    +   M      P+  +  T+I+
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              C+ G+L     +++++  K   P      S+I  + +  ++ E       M+ + ++ 
Sbjct: 713  GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            DTI Y+ +V    K  ++ +A   + EM  R  + +   YT  I  +C+ G + EA  L 
Sbjct: 773  DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 832

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             EM   GL+P   TF  L+ G  KA  I+++      M+     P+   +  +I  LC+ 
Sbjct: 833  HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            G+   AN +L      G  PN  TY+ ++ G  K G I+E +KL  E E   ++     Y
Sbjct: 893  GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 952

Query: 307  TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG---IH--LEKGNKAKALHLC 361
            T+L+ + C+ G++++A +    M    L P +  +  L+    +H  LE G K     L 
Sbjct: 953  TTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK-----LL 1007

Query: 362  EEMVSEGLKP-STSYLC 377
              M+++G+ P +T++ C
Sbjct: 1008 NWMLAKGIAPNATTFNC 1024



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 147/299 (49%)

Query: 44   RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            +++  ML     P+  T   L++  CK G ++    + + +    CSP V+  T+LI  +
Sbjct: 830  KLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889

Query: 104  IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
             +E  ++    LL  M +  +  +   Y+ IV    K  N+E A+ +  E    G +A++
Sbjct: 890  CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 949

Query: 164  FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
              YTT + AYC+ G++++A  ++ EM   GL+P   TFN+L+ G      +E+       
Sbjct: 950  VTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009

Query: 224  MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
            M+++ + P+ + FN ++++ C   N K A  +      +G  P+  TY +L+ G+     
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARN 1069

Query: 284  IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            ++E   L+ EM+ K  S ++  Y+ LI    +  K  EA + F  M+   L    +I++
Sbjct: 1070 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFD 1128



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 110/228 (48%)

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A++V+ E  + G   N   Y   I   C+ G+I EA+ L+  ME  G  P   +++ +I
Sbjct: 652 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVI 711

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  +   +++     E+M  + L P+   +  +I  LC      +A    +  + +G  
Sbjct: 712 NGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGIL 771

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ I Y+ L+ G+ K G+I+   K +YEM  + I+P +  YT++IS  CQ G + EA K 
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           F  M    L P +  +  L+  + + G+   A  +   M+  G  P+ 
Sbjct: 832 FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 35/288 (12%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            AF V  ++ Q G S +++++ TLI  + K    D    +   M +    PN  T  ++++
Sbjct: 863  AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 922

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             LCK G                                    IEE + L+       +  
Sbjct: 923  GLCKSGN-----------------------------------IEEAVKLVGEFEAAGLNA 947

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            DT+ Y+ ++ A  K   ++ A  +  EML +G       +   +  +C +G +E+   L+
Sbjct: 948  DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1007

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
              M   G+ P   TFN L++       ++ + +  + M SR + P    +  +++  C  
Sbjct: 1008 NWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNA 1067

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             N K+A  +      KGFS +  TYS LI G+ K  +  E  +++ +M
Sbjct: 1068 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 5/254 (1%)

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF--SANS-FVYTTFIGAYCEYGK 178
           K+   D   + +     V+   L  A  V+E+ML  G   S +S  VY   +   C   K
Sbjct: 592 KDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCN--K 649

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
              A  + +E    G+     ++N++I    +  RI E+      M  +   P   +++ 
Sbjct: 650 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYST 709

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C  G   +   ++     KG  PN  TY  +IG   +  ++ E  + + EM  + 
Sbjct: 710 VINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG 769

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I P    YT+L+   C+ G +  A K+F  M S  + P V  Y +++    + G+  +A 
Sbjct: 770 ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 829

Query: 359 HLCEEMVSEGLKPS 372
            L  EM+  GL+P 
Sbjct: 830 KLFHEMLCRGLEPD 843



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 88/217 (40%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
             E  G +   +++ TL+    KS   D    I   ML     P   T   L++  C  G 
Sbjct: 940  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999

Query: 74   LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            L+    +L+ +  K  +P       L+ +      ++    + K M  + +  D   Y  
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYEN 1059

Query: 134  IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +V      RN++ A  +++EM  +GFS +   Y+  I  + +  K  EA  +  +M   G
Sbjct: 1060 LVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119

Query: 194  LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
            L    E F+   +   K KR +  +   ++++   L+
Sbjct: 1120 LAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1156


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 166/350 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++++ LIH + ++ R +  +++ Q M+E    P+  T   LI A C  G     + MLD 
Sbjct: 200 VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 259

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C P V   T LI R+ +E +IEE   + ++ML+  +    I ++ ++    K   
Sbjct: 260 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 319

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           + SA  +   M K     N   Y   +   C   K  +A  L++ + + GL P   T+N+
Sbjct: 320 VVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNI 379

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L++G  K  ++  + +    M S  L P    F  +I  LC+ G  +QANG+L   + KG
Sbjct: 380 LVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKG 439

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            S +E+T++ LI G+ K G+ ++V  L+  M       T   +   + +L +  KL EA+
Sbjct: 440 ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEAN 499

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                M  + LVP V  +  L+  H   G  A +L + E M   G  P+ 
Sbjct: 500 AMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 549



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 164/349 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++  LI  + +  + +    +++ ML++   P   T   LI+  CK G + +   +L  +
Sbjct: 271 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 330

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C P +     L+  + +  +  +  +LL+R++   ++ D + Y+++V    K   L
Sbjct: 331 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 390

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  ++  M   G   + F +T  I   C+ G++E+AN ++  M   G+   + TF  L
Sbjct: 391 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 450

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K  + ++     E M+  + L +   FN  +  L +     +AN ML   +  G 
Sbjct: 451 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 510

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ +T++ LI G+ + GE    LK+   M+    SP +  YT +I+ LC  G++EEA+ 
Sbjct: 511 VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET 570

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
               M S  + P    Y  LV  H++ G   +A  +   MV  G +P++
Sbjct: 571 ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNS 619



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 163/364 (44%), Gaps = 7/364 (1%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP---NEATIR 62
           VAF V R +   GF L  I + T+++ + K   N  V        + +R     +     
Sbjct: 111 VAFLVYRRMVNEGFVLGGIDYRTVVNALCK---NGFVQAAEMFCCKVLRLGFGLDTHVCT 167

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           +L+ A C+   L     + +++  +  C P  +  + LI  + +  R+EE   L + M+ 
Sbjct: 168 SLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 227

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K     T  Y++++ AK  +   + A+ + +EM  +    N   YT  I   C  GKIEE
Sbjct: 228 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 287

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           AN + ++M   GL P   TFN LI G  K   +  +      M      P+   +NE++ 
Sbjct: 288 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 347

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC    + +A  +L   +D G  P+ +TY+ L+ G+ KEG++     ++  M    + P
Sbjct: 348 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 407

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               +T+LI  LC+ G+LE+A+     M    +      + +L+  H + G       L 
Sbjct: 408 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 467

Query: 362 EEMV 365
           E MV
Sbjct: 468 ENMV 471



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 157/360 (43%), Gaps = 36/360 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + GF LS   ++TL+  + K +   + + +Y+ M+           RT+++ALCK G 
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q                                      +   ++LR     DT   + 
Sbjct: 144 VQA-----------------------------------AEMFCCKVLRLGFGLDTHVCTS 168

Query: 134 IVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +V A  +  +L  A  V+E+M K      NS  Y+  I   CE G++EEA  L QEM   
Sbjct: 169 LVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   T+ +LI+        ++++   ++M ++  +P+   +  +I RLC  G  ++A
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           NG+    L  G  P  IT++ LI GY KEG +    +L   ME  +  P +  Y  L+  
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+  K  +A    + +  + L+P    Y  LV    ++G    A ++   M S GL+P 
Sbjct: 349 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 174/404 (43%), Gaps = 36/404 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +E+     ++ ++N L+  + +  ++   + + + +++N   P+  T   L+ 
Sbjct: 323 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 382

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK GQL    ++ + ++     P     T+LI  + +  R+E+   +L  M++K +  
Sbjct: 383 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 442

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++    K+   +    ++E M++      +  +  F+ A  +  K+ EAN ++
Sbjct: 443 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 502

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   GL P   T  +LIEG  +A     SL   E+M      P+   +  +I  LC  
Sbjct: 503 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 562

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +L      G SPN  TY+ L+  + K G +    ++   M      P    Y
Sbjct: 563 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 622

Query: 307 TSLIS------------SLCQCGKL-------EEADK------YFKIMK-SHSL------ 334
           ++L+S            +L   G L       EE D        F++M   H+L      
Sbjct: 623 SALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEI 682

Query: 335 ----VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
               VP  D+Y  LV    ++G   +A  L ++MV  GL P  +
Sbjct: 683 KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 726



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 124/307 (40%), Gaps = 39/307 (12%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN  +  + K  + +    +   M++    P+  T   LI   C+ G+    + ML+R+
Sbjct: 481 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 540

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               CSP V   T +I  +    R+EE   +L  M    +  +   Y+++V A VK   L
Sbjct: 541 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 600

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYC------------EYGKIE---------EAN 183
           + A  +   M+K G   NS +Y+  +  +               G ++         + N
Sbjct: 601 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNN 660

Query: 184 CL----------------MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           CL                  E++  G+ P ++ +N L+ G  K  RI E+    + M+  
Sbjct: 661 CLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 719

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            L P   A + +I   C+          + L LD  F P+  +Y  +I G   EG +QE 
Sbjct: 720 GLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 778

Query: 288 LKLYYEM 294
            KL  ++
Sbjct: 779 QKLVSDL 785



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 15/122 (12%)

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQ-------EVLKLYYEMEYKSISPTLPAYTSLISS 312
           +++GF    I Y  ++    K G +Q       +VL+L + ++           TSL+ +
Sbjct: 120 VNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTH-------VCTSLVLA 172

Query: 313 LCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            C+   L EA + F K+ K  S  P    Y  L+    E G   +A  L +EMV +G +P
Sbjct: 173 NCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 232

Query: 372 ST 373
           ST
Sbjct: 233 ST 234


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 178/381 (46%), Gaps = 3/381 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+    ++++G   ++ + N+L+ +  K +R +  W +Y  M       +  T   +I+
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L+   D +  +      P ++   +++       R+E    +L  M R+ +  
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D+  Y  ++    K   LE A  ++EEM+++G   ++ +Y T I  +C  G ++ A+   
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+ P   T+N LI      +R +E+    +++  + + P    +N +I   C C
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            NAK+A  +    L  G  P + TY+ L+   +K+  ++E   L+ ++  + + P +  +
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMF 469

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LI   C    ++ A +  K M    + P    + +++  H  +G   +A  L +EM  
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529

Query: 367 EGLKP---STSYLCSASTCRG 384
            G+KP   S + L S  + RG
Sbjct: 530 RGIKPDHISFNTLISGYSRRG 550



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 163/341 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   ++++       ++ +LI  + K  R +   +I++ M++    P+     TL
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C  G L       D +  K  SP +    SLI  +  E+R +E   ++K +  K +
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I Y++++    +  N + A ++++EML  G       YT+ +    +  +++EA+ 
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++ + G+ P    FN LI+G      ++ +    + M   K+ P    FN +++  C
Sbjct: 453 LFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  ++A  +      +G  P+ I+++ LI GY++ G+I++  ++  EM     +PT+ 
Sbjct: 513 REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            Y +L+  LC+  + + A++  K M S  + P    Y +L+
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 169/354 (47%), Gaps = 6/354 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+ +FN +I+V+ K  +         HM  +   PN  T  T++   C  G+++    +L
Sbjct: 220 SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++  P      SLI  + ++ R+EE   + + M++K +    + Y+ ++      
Sbjct: 280 TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            NL+ A    +EMLK+G S     Y + I A     + +EA C+++E++  G+ P   T+
Sbjct: 340 GNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399

Query: 202 NLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           N+LI G   CA AK+   +    ++M++  + P+   +  ++  L +    K+A+ +   
Sbjct: 400 NILINGYCRCANAKK---AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              +G  P+ I ++ LI G+     ++   +L  +M+   + P    + +++   C+ GK
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +EEA + F  MK   + P    + +L+  +  +G+   A  +  EM+  G  P+
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 128/265 (48%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G S ++ ++N+LIH +    R D    + + + E    P+  T   LI+  C+    +
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAK 413

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + D +      P     TSL+  + ++ R++E   L K++  + ++ D I ++ ++
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                  N++ A  + ++M +     +   + T +  +C  GK+EEA  L  EM+  G+K
Sbjct: 474 DGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIK 533

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   +FN LI G ++   I+++     +M+     P+   +N +++ LC+      A  +
Sbjct: 534 PDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEEL 593

Query: 256 LTLALDKGFSPNEITYSHLIGGYAK 280
           L   + KG +P++ TY  LI G AK
Sbjct: 594 LKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 1/217 (0%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           GF + S V+   I + C+  + +EA      M+  G+ P  ET N L+    K  R E +
Sbjct: 147 GFKS-SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
                +M   ++  S   FN MI  LC+ G  K+A   +      G  PN +TY+ ++ G
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           Y   G ++    +   M+ + I P    Y SLIS +C+ G+LEEA K F+ M    L P 
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             IY +L+     KGN   A    +EM+ +G+ P+ S
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 108/245 (44%)

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           +I +  ++ +   M   + A   +  M ++G         + +  + +  + E A  L  
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM    +K    TFN++I    K  +++++  +   M +  + P+   +N ++   C  G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             + A+ +LT    +   P+  TY  LI G  K+G ++E  K++ EM  K + P+   Y 
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +LI   C  G L+ A  Y   M    + P +  Y SL+     +    +A  + +E+  +
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 368 GLKPS 372
           G+ P 
Sbjct: 391 GISPD 395



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 91/193 (47%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++ +L+HV++K +R      +++ +      P+      LI   C    ++   ++L  +
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +  P  +   +++    +E ++EE   L   M R+ +  D I+++ ++    +  ++
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  V  EML  GF+     Y   +   C+  + + A  L++EM + G+ P D T+  L
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 205 IEGCAKAKRIEES 217
           IEG AK    +E+
Sbjct: 613 IEGIAKVNIPDEN 625



 Score = 44.7 bits (104), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 68/167 (40%)

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G      I E   +      R    S   F+ +I+  C+   A +A        +KG  P
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLP 184

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
              T + L+  + K    +    LY EM    I  ++  +  +I+ LC+ GKL++A  + 
Sbjct: 185 TIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFV 244

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             M++  + P +  Y ++V  +   G    A  +   M  + ++P +
Sbjct: 245 GHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 177/391 (45%), Gaps = 32/391 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L   GF    +S+ T++  +  + R + V  ++  M+E    PNE T   L+   C+GG 
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +L+++ G  C+    +   +I  I ++ R+++    L  M       DTI+Y+ 
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +    E A  + +EM+++    N   + TFI   C+ G IE+A  L+++M   G
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420

Query: 194 L--------------------------------KPYDETFNLLIEGCAKAKRIEESLSYC 221
                                            KP   T+  L+ G   A+R++ +    
Sbjct: 421 CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELL 480

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            +M+ +   P+   FN ++   C+ G   +A  ++   ++ G +PN ITY+ L+ G   +
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITND 540

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
              +E L+L + +    +SP +  Y+S+I  L +  ++EEA K F I++   + P   IY
Sbjct: 541 CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIY 600

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++    ++ N   A+     MVS G  P+
Sbjct: 601 NKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 170/357 (47%), Gaps = 3/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   S++++  L+  V KS        +   M      PN  T   +I+ +C+ G++ 
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              + L+R+      P  +  T+++  +   +R E+   L   M+ KN + + + + ++V
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +E A+ V E+M   G +AN+ +    I   C+ G++++A   +  M + G  
Sbjct: 293 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 352

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++  +++G  +A+R E++    ++M+ +   P+   FN  I  LC+ G  +QA  +
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    + G   N +TY+ L+ G+  +G +   L+L+Y M  K   P    YT+L++ LC 
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCN 469

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +L+ A +    M      P V  +  LV    +KG   +A+ L E+M+  G  P+
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 6/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R  E+ G ++ + ++NTL+    +  + D   R+   M      P+  T   +I 
Sbjct: 97  AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIR 153

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G++   + +LD +  + C P V+  T L+  + +     + M +L  M  K    
Sbjct: 154 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP 213

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++I+    +   ++ A      +   GF  ++  YTT +   C   + E+   L 
Sbjct: 214 NIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM      P + TF++L+    +   +E ++   EQM       + +  N +I  +C+ 
Sbjct: 274 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A   L      G SP+ I+Y+ ++ G  +    ++  +L  EM  K+  P    +
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            + I  LCQ G +E+A    + M  H     +  Y +LV     +G    AL L     S
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL---FYS 450

Query: 367 EGLKPST 373
              KP+T
Sbjct: 451 MPCKPNT 457



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 4/277 (1%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           R+I  + + E   L+ R   +    D    + ++    +      A  V     + G + 
Sbjct: 52  RLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV 111

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           + F Y T +  YC YG+++ A  L+  M  A   P   T+  +I G     R+ E+LS  
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + M+ R   PS   +  ++  +C+     QA  +L     KG +PN +TY+ +I G  +E
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + +  +    +      P   +YT+++  LC   + E+ ++ F  M   + +P    +
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           + LV      G   +A+ + E+M   G   +T+ LC+
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT-LCN 324



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 138/320 (43%), Gaps = 32/320 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     +   G S   IS+ T++  + +++R +    + + M+     PNE T  T I 
Sbjct: 339 AFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFIC 398

Query: 67  ALCKGGQLQTYVDMLDRI--HG------------------------------KRCSPMVI 94
            LC+ G ++    +++++  HG                                C P  I
Sbjct: 399 ILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI 458

Query: 95  VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM 154
             T+L+  +   ER++    LL  ML+K+   + + ++++V    +   ++ A+ + E+M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           ++ G + N   Y T +         EEA  L+  + + G+ P   T++ +I   ++  R+
Sbjct: 519 MEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           EE++     +    + P    +N+++  LC+  N   A       +  G  PNE+TY  L
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 275 IGGYAKEGEIQEVLKLYYEM 294
           I G A E  ++E   L  E+
Sbjct: 639 IEGLANEDFLKETRDLLREL 658



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 96/207 (46%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++ TL+  +  ++R D    +   ML+    PN  T   L+S  C+ G +   ++++++
Sbjct: 458 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQ 517

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C+P +I   +L+  I  +   EE + LL  ++   +  D + YS I+    +   
Sbjct: 518 MMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDR 577

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E A+ ++  +   G    + +Y   + A C+    + A      M + G  P + T+  
Sbjct: 578 VEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYIT 637

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLL 230
           LIEG A    ++E+     ++ SR +L
Sbjct: 638 LIEGLANEDFLKETRDLLRELCSRGVL 664



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 6/150 (4%)

Query: 226 SRKLLPSCSAFNEM---IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +R   PS S+ N     +RRL    +  +A  ++  A  +G +P+    + LI    + G
Sbjct: 33  TRPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRG 92

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
              +  ++    E    +  + AY +L++  C+ G+L+ A    +++ S  + P    Y 
Sbjct: 93  RTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR---RLIASMPVAPDAYTYT 149

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++    ++G   +AL L ++M+  G +PS
Sbjct: 150 PIIRGLCDRGRVGEALSLLDDMLHRGCQPS 179


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 166/350 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++++ LIH + ++ R +  +++ Q M+E    P+  T   LI A C  G     + MLD 
Sbjct: 266 VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 325

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C P V   T LI R+ +E +IEE   + ++ML+  +    I ++ ++    K   
Sbjct: 326 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 385

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           + SA  +   M K     N   Y   +   C   K  +A  L++ + + GL P   T+N+
Sbjct: 386 VVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNI 445

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L++G  K  ++  + +    M S  L P    F  +I  LC+ G  +QANG+L   + KG
Sbjct: 446 LVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKG 505

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            S +E+T++ LI G+ K G+ ++V  L+  M       T   +   + +L +  KL EA+
Sbjct: 506 ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEAN 565

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                M  + LVP V  +  L+  H   G  A +L + E M   G  P+ 
Sbjct: 566 AMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 615



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 156/329 (47%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +++ ML++   P   T   LI+  CK G + +   +L  +    C P +     L+  + 
Sbjct: 357 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +  +  +  +LL+R++   ++ D + Y+++V    K   L  A  ++  M   G   + F
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            +T  I   C+ G++E+AN ++  M   G+   + TF  LI+G  K  + ++     E M
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +  + L +   FN  +  L +     +AN ML   +  G  P+ +T++ LI G+ + GE 
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
              LK+   M+    SP +  YT +I+ LC  G++EEA+     M S  + P    Y  L
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           V  H++ G   +A  +   MV  G +P++
Sbjct: 657 VKAHVKAGRLDRAFQIVSTMVKNGCQPNS 685



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 169/388 (43%), Gaps = 36/388 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + GF LS   ++TL+  + K +   + + +Y+ M+           RT+++ALCK G 
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209

Query: 74  LQ-----------------TYV-----------DMLD---RIHGK-----RCSPMVIVNT 97
           +Q                 T+V           D L    R+  K      C P  +  +
Sbjct: 210 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 269

Query: 98  SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
            LI  + +  R+EE   L + M+ K     T  Y++++ AK  +   + A+ + +EM  +
Sbjct: 270 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 329

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
               N   YT  I   C  GKIEEAN + ++M   GL P   TFN LI G  K   +  +
Sbjct: 330 ACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSA 389

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
                 M      P+   +NE++  LC    + +A  +L   +D G  P+ +TY+ L+ G
Sbjct: 390 FQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG 449

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           + KEG++     ++  M    + P    +T+LI  LC+ G+LE+A+     M    +   
Sbjct: 450 FCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLD 509

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMV 365
              + +L+  H + G       L E MV
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENMV 537



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 169/388 (43%), Gaps = 20/388 (5%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +E+     ++ ++N L+  + +  ++   + + + +++N   P+  T   L+ 
Sbjct: 389 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 448

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK GQL    ++ + ++     P     T+LI  + +  R+E+   +L  M++K +  
Sbjct: 449 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 508

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++    K+   +    ++E M++      +  +  F+ A  +  K+ EAN ++
Sbjct: 509 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 568

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   GL P   T  +LIEG  +A     SL   E+M      P+   +  +I  LC  
Sbjct: 569 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 628

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +L      G SPN  TY+ L+  + K G +    ++   M      P    Y
Sbjct: 629 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 688

Query: 307 TSLIS------------SLCQCGKLEEADKYFKIMKSHSL--------VPGVDIYESLVG 346
           ++L+S            +L   G L+      +   ++ L        VP  D+Y  LV 
Sbjct: 689 SALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVV 748

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              ++G   +A  L ++MV  GL P  +
Sbjct: 749 GLCKEGRIIEADQLTQDMVKHGLFPDKA 776



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 23/291 (7%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN  +  + K  + +    +   M++    P+  T   LI   C+ G+    + ML+R+
Sbjct: 547 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 606

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               CSP V   T +I  +    R+EE   +L  M    +  +   Y+++V A VK   L
Sbjct: 607 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 666

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYC------------EYGKIE---------EAN 183
           + A  +   M+K G   NS +Y+  +  +               G ++         + N
Sbjct: 667 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNN 726

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           CL  E++  G+ P ++ +N L+ G  K  RI E+    + M+   L P   A + +I   
Sbjct: 727 CLSNEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHY 784

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           C+          + L LD  F P+  +Y  +I G   EG +QE  KL  ++
Sbjct: 785 CKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 835



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 1/243 (0%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           YS ++    K+     A +VY  M+  GF      Y T + A C+ G ++ A     ++ 
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK-LLPSCSAFNEMIRRLCECGNA 249
             G          L+    +   + E+    E+M   +   P+   ++ +I  LCE G  
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +    ++KG  P+  TY+ LI      G   + +K+  EM  K+  P +  YT L
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+ GK+EEA+  F+ M  H L PG+  + +L+  + ++G    A  L   M     
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401

Query: 370 KPS 372
           KP+
Sbjct: 402 KPN 404



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 15/122 (12%)

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQ-------EVLKLYYEMEYKSISPTLPAYTSLISS 312
           +++GF    I Y  ++    K G +Q       +VL+L + ++           TSL+ +
Sbjct: 186 VNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTH-------VCTSLVLA 238

Query: 313 LCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            C+   L EA + F K+ K  +  P    Y  L+    E G   +A  L +EMV +G +P
Sbjct: 239 NCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 298

Query: 372 ST 373
           ST
Sbjct: 299 ST 300


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 166/350 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++++ LIH + ++ R +  +++ Q M+E    P+  T   LI A C  G     + MLD 
Sbjct: 243 VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 302

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C P V   T LI R+ +E +IEE   + ++ML+  +    I ++ ++    K   
Sbjct: 303 MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGW 362

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           + SA  +   M K     N   Y   +   C   K  +A  L++ + + GL P   T+N+
Sbjct: 363 VVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNI 422

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L++G  K  ++  + +    M S  L P    F  +I  LC+ G  +QANG+L   + KG
Sbjct: 423 LVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKG 482

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            S +E+T++ LI G+ K G+ ++V  L+  M       T   +   + +L +  KL EA+
Sbjct: 483 ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEAN 542

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                M  + LVP V  +  L+  H   G  A +L + E M   G  P+ 
Sbjct: 543 AMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 592



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 156/329 (47%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +++ ML++   P   T   LI+  CK G + +   +L  +    C P +     L+  + 
Sbjct: 334 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 393

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +  +  +  +LL+R++   ++ D + Y+++V    K   L  A  ++  M   G   + F
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            +T  I   C+ G++E+AN ++  M   G+   + TF  LI+G  K  + ++     E M
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +  + L +   FN  +  L +     +AN ML   +  G  P+ +T++ LI G+ + GE 
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
              LK+   M+    SP +  YT +I+ LC  G++EEA+     M S  + P    Y  L
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 633

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           V  H++ G   +A  +   MV  G +P++
Sbjct: 634 VKAHVKAGRLDRAFQIVSTMVKNGCQPNS 662



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 163/364 (44%), Gaps = 7/364 (1%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP---NEATIR 62
           VAF V R +   GF L  I + T+++ + K   N  V        + +R     +     
Sbjct: 154 VAFLVYRRMVNEGFVLGGIDYRTVVNALCK---NGFVQAAEMFCCKVLRLGFGLDTHVCT 210

Query: 63  TLISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           +L+ A C+   L     + +++  +  C P  +  + LI  + +  R+EE   L + M+ 
Sbjct: 211 SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 270

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K     T  Y++++ AK  +   + A+ + +EM  +    N   YT  I   C  GKIEE
Sbjct: 271 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 330

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           AN + ++M   GL P   TFN LI G  K   +  +      M      P+   +NE++ 
Sbjct: 331 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 390

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC    + +A  +L   +D G  P+ +TY+ L+ G+ KEG++     ++  M    + P
Sbjct: 391 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 450

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               +T+LI  LC+ G+LE+A+     M    +      + +L+  H + G       L 
Sbjct: 451 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 510

Query: 362 EEMV 365
           E MV
Sbjct: 511 ENMV 514



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 157/360 (43%), Gaps = 36/360 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + GF LS   ++TL+  + K +   + + +Y+ M+           RT+++ALCK G 
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q                                      +   ++LR     DT   + 
Sbjct: 187 VQA-----------------------------------AEMFCCKVLRLGFGLDTHVCTS 211

Query: 134 IVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +V A  +  +L  A  V+E+M K      NS  Y+  I   CE G++EEA  L QEM   
Sbjct: 212 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   T+ +LI+        ++++   ++M ++  +P+   +  +I RLC  G  ++A
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           NG+    L  G  P  IT++ LI GY KEG +    +L   ME  +  P +  Y  L+  
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+  K  +A    + +  + L+P    Y  LV    ++G    A ++   M S GL+P 
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 174/404 (43%), Gaps = 36/404 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +E+     ++ ++N L+  + +  ++   + + + +++N   P+  T   L+ 
Sbjct: 366 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 425

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK GQL    ++ + ++     P     T+LI  + +  R+E+   +L  M++K +  
Sbjct: 426 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 485

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++    K+   +    ++E M++      +  +  F+ A  +  K+ EAN ++
Sbjct: 486 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 545

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   GL P   T  +LIEG  +A     SL   E+M      P+   +  +I  LC  
Sbjct: 546 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 605

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +L      G SPN  TY+ L+  + K G +    ++   M      P    Y
Sbjct: 606 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 665

Query: 307 TSLIS------------SLCQCGKL-------EEADK------YFKIMK-SHSL------ 334
           ++L+S            +L   G L       EE D        F++M   H+L      
Sbjct: 666 SALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEI 725

Query: 335 ----VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
               VP  D+Y  LV    ++G   +A  L ++MV  GL P  +
Sbjct: 726 KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKA 769



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 124/307 (40%), Gaps = 39/307 (12%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN  +  + K  + +    +   M++    P+  T   LI   C+ G+    + ML+R+
Sbjct: 524 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 583

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               CSP V   T +I  +    R+EE   +L  M    +  +   Y+++V A VK   L
Sbjct: 584 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 643

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYC------------EYGKIE---------EAN 183
           + A  +   M+K G   NS +Y+  +  +               G ++         + N
Sbjct: 644 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNN 703

Query: 184 CL----------------MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           CL                  E++  G+ P ++ +N L+ G  K  RI E+    + M+  
Sbjct: 704 CLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 762

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            L P   A + +I   C+          + L LD  F P+  +Y  +I G   EG +QE 
Sbjct: 763 GLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 821

Query: 288 LKLYYEM 294
            KL  ++
Sbjct: 822 QKLVSDL 828



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 15/122 (12%)

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQ-------EVLKLYYEMEYKSISPTLPAYTSLISS 312
           +++GF    I Y  ++    K G +Q       +VL+L + ++           TSL+ +
Sbjct: 163 VNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTH-------VCTSLVLA 215

Query: 313 LCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            C+   L EA + F K+ K  +  P    Y  L+    E G   +A  L +EMV +G +P
Sbjct: 216 NCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 275

Query: 372 ST 373
           ST
Sbjct: 276 ST 277


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G   +++S+N +I    +    D+   ++  ML     PN  T   LI    K G  +
Sbjct: 497 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 556

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +D+ D++     +P      ++I  + +  ++ E    LK  L +  I   + Y+ IV
Sbjct: 557 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 616

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              +K  N++SAL VY EM + G S N   YT+ I  +C+  +I+ A     EM   GL+
Sbjct: 617 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 676

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                ++ LI+G  K + +E +     +++   L P+   +N MI    +  N + A   
Sbjct: 677 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 736

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               ++     +  TY+ LI G  KEG +     LY EM  K I P +  +  L++ LC 
Sbjct: 737 YKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCN 796

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G+LE A K  + M   ++ P V IY +L+  +  +GN  +A  L +EM+  GL P 
Sbjct: 797 KGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPD 853



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 1/355 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++L+   +L+         D    ++  + E+  +PN+ T   LI   C  G ++  
Sbjct: 360 GKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA 419

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++  ++      P V    SL+   ++    EE   L    +    + +   Y++++  
Sbjct: 420 SELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSW 478

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A  + + M+ +G   N   Y   I  +C  G ++ A+ +  +M    LKP 
Sbjct: 479 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPN 538

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI+G  K    E++L   +QM+S  + P+   FN +I  LC+ G   +A   L 
Sbjct: 539 VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLK 598

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L++GF P+ +TY+ ++ G+ KEG I   L +Y EM    +SP +  YTSLI+  C+  
Sbjct: 599 NFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 658

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +++ A K    M+   L   V  Y +L+    ++ +   A  L  E++  GL P+
Sbjct: 659 RIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPN 713



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 162/344 (47%), Gaps = 34/344 (9%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I A+CK       +++L+ +  +   P     TS+I+  + +  + E + L + M+   
Sbjct: 301 IIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG 360

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + +  + ++       NL+SAL ++ ++ + G   N   Y+  I   C  G IE+A+
Sbjct: 361 KPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKAS 420

Query: 184 CLMQEMENAGLKP------------------------YDE----------TFNLLIEGCA 209
            L  +M+  G+ P                        +DE          T+N+++    
Sbjct: 421 ELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLC 480

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  +++E+ S  + M+++ ++P+  ++N+MI   C  GN   A+ + +  L +   PN +
Sbjct: 481 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVV 540

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TYS LI G  K+G+ ++ L L+ +M   +I+PT   + ++I+ LC+ G++ EA    K  
Sbjct: 541 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 600

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                +P    Y S+V   +++GN   AL +  EM   G+ P+ 
Sbjct: 601 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 644



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 152/342 (44%), Gaps = 35/342 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A  V   +  R    ++++++ LI    K   ++    ++  ML     P + T  T+
Sbjct: 521 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 580

Query: 65  ISALCKGGQLQ-------------------TYVDMLD------------RIHGKRC---- 89
           I+ LCK GQ+                    TY  ++D             ++ + C    
Sbjct: 581 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 640

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           SP V+  TSLI    +  RI+  +     M  K +  D  AYS ++    K R++ESA  
Sbjct: 641 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 700

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++ E+L+ G S N  VY + I  + +   +E A    ++M N  +     T+  LI+G  
Sbjct: 701 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 760

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  R+  +     +M+S+ ++P    F+ ++  LC  G  + A  +L     K  +P+ +
Sbjct: 761 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 820

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            Y+ LI GY +EG ++E   L+ EM  + + P    Y  LI+
Sbjct: 821 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 127/274 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D  +   + GF  S +++N+++    K    D    +Y+ M E    PN  T  +LI+
Sbjct: 593 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 652

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK  ++   +   D +  K     V   ++LI    +   +E    L   +L   +  
Sbjct: 653 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSP 712

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y+ ++     + N+E+ALV Y++M+      +   YTT I    + G++  A+ L 
Sbjct: 713 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 772

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+ P   TF++L+ G     ++E +    E+M  + + PS   +N +I      
Sbjct: 773 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 832

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
           GN K+A  +    LD+G  P+++TY  LI G  K
Sbjct: 833 GNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 146/344 (42%), Gaps = 34/344 (9%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++A  +  +++  +D  + +  +   P V     L+  +++   I E   L  +M+ + 
Sbjct: 196 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 255

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D     ++V A +K   +E A   + E  +RG   ++  Y+  I A C+        
Sbjct: 256 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 315

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM+  G  P + TF  +I  C     + E+L   E+M++     +      +++  
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 375

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  GN   A  +     + G  PN++TYS LI G    G I++  +LY +M+   I P++
Sbjct: 376 CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSV 435

Query: 304 -------------P---------------------AYTSLISSLCQCGKLEEADKYFKIM 329
                        P                      Y  ++S LC+ GK++EA      M
Sbjct: 436 FNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNM 495

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  +VP V  Y  ++  H  KGN   A  +  +M++  LKP+ 
Sbjct: 496 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 539



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 1/282 (0%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           I+  RIE  +     M+ +++I      ++++ A V+   +     +Y +M+ RG   + 
Sbjct: 201 IRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDH 260

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           F     + A  + G++EEA    +E +  G+K     ++++I+   K       L   E+
Sbjct: 261 FTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEE 320

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M  R  +PS + F  +I      GN  +A  +    ++ G   N +  + L+ GY  +G 
Sbjct: 321 MKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGN 380

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           +   L L+ ++    + P    Y+ LI   C  G +E+A + +  MK + + P V    S
Sbjct: 381 LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNS 440

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY-LCSASTCRG 384
           L+  +L+     +A  L +E V  G+    +Y +  +  C+G
Sbjct: 441 LLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKG 482



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 35/244 (14%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  V R + + G S +++++ +LI+   KS+R DL  +    M E     +      L
Sbjct: 626 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 685

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM----- 119
           I   CK   +++  D+   +     SP  IV  S+I        +E  +V  K+M     
Sbjct: 686 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 745

Query: 120 ------------------------------LRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
                                         L K ++ D I + ++V        LE+A  
Sbjct: 746 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 805

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           + EEM ++  + +  +Y T I  Y   G ++EA  L  EM + GL P D T+++LI G  
Sbjct: 806 ILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKF 865

Query: 210 KAKR 213
           K  R
Sbjct: 866 KGDR 869



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 96/250 (38%), Gaps = 35/250 (14%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEA-NC--------------------------------- 184
           F  +  V+   + AY    +IE A +C                                 
Sbjct: 186 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 245

Query: 185 -LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +M   G+     T ++++  C K  R+EE+  Y  +   R +     A++ +I+ +
Sbjct: 246 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 305

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+  N+     +L    ++G+ P+E T++ +I     +G + E L+L  EM        L
Sbjct: 306 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNL 365

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
              TSL+   C  G L+ A   F  +    L P    Y  L+      GN  KA  L  +
Sbjct: 366 VVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ 425

Query: 364 MVSEGLKPST 373
           M   G+ PS 
Sbjct: 426 MKLNGIPPSV 435


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 174/365 (47%), Gaps = 11/365 (3%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G + SL+S+N +I    K    D    +   ++E+   PN  T   L+    K G  + 
Sbjct: 460 KGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEH 519

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             +M D++      P      S+I  + +  R+ E    L   ++++ I  ++ Y+ I+ 
Sbjct: 520 AFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIID 579

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
             VK   ++SA  VY EM +   S N   YT+ I  +C+  K++ A  +  +M+  GL+ 
Sbjct: 580 GYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLEL 639

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +  LI G  K + +E +  +  +++   L P+   +N MI       N + A    
Sbjct: 640 DITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAA---- 695

Query: 257 TLALDKGFSPNEIT-----YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            L L K    N+I      Y+ LI G  KEG++   L LY EM  + I P +  Y  LI+
Sbjct: 696 -LNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLIN 754

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+LE A K  K M  +++ P V +Y +L+  H ++GN  +A  L +EM+ +GL P
Sbjct: 755 GLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVP 814

Query: 372 -STSY 375
             T+Y
Sbjct: 815 DDTTY 819



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 163/330 (49%), Gaps = 1/330 (0%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           R++  ++E    PN A    LI    K G ++   ++  R+      P V +  + +L+ 
Sbjct: 348 RLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFI-LNFLLKG 406

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +++ + E   LL     +N I   + Y++++    ++  +  A  ++++M+ +G + + 
Sbjct: 407 FRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSL 466

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y   I  +C+ G +++A+ +M  +  +GLKP   T+ +L+EG  K    E + +  +Q
Sbjct: 467 VSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQ 526

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M++  ++P+   FN +I  LC+ G   +A   L   + + F P  +TY+ +I GY KEG 
Sbjct: 527 MVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGA 586

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           I     +Y EM    ISP +  YTSLI+  C+  K++ A K    MK   L   + +Y +
Sbjct: 587 IDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYAT 646

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L+    +  +   A     +++  GL P+T
Sbjct: 647 LIAGFCKMQDMENACKFFSKLLEVGLTPNT 676



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 140/308 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF++   +   G   +  +FN++I+ + K  R           ++    P   T   +
Sbjct: 518 EHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCI 577

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I    K G + +   +   +     SP VI  TSLI    +  +++  + +   M RK +
Sbjct: 578 IDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGL 637

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ ++    KM+++E+A   + ++L+ G + N+ VY   I AY     +E A  
Sbjct: 638 ELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALN 697

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM N  +    + +  LI+G  K  ++  +L    +M+ R ++P    +N +I  LC
Sbjct: 698 LHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLC 757

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A  +L        +P  + Y+ LI G+ KEG +QE  +L+ EM  K + P   
Sbjct: 758 NHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDT 817

Query: 305 AYTSLISS 312
            Y  L++ 
Sbjct: 818 TYDILVNG 825



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/317 (19%), Positives = 126/317 (39%), Gaps = 34/317 (10%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V     L+  +I+   +E+   L   M  + +  D     +++ A +K      A   
Sbjct: 185 PWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERY 244

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           + +   RG   ++  Y+  I A C    ++ A+ L++  E  G  P + T+  +I  C +
Sbjct: 245 FGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVR 304

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
                E+L   ++M+  ++  + +    +I+  C  G+   A  +    ++ G +PN   
Sbjct: 305 LGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAI 364

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT---------------------------- 302
           +S LI   +K G +++  +LY  M+   + PT                            
Sbjct: 365 FSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV 424

Query: 303 ------LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
                 +  Y  ++  LC+ GK+ EA   +  M    + P +  Y  ++  H +KG    
Sbjct: 425 ENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDD 484

Query: 357 ALHLCEEMVSEGLKPST 373
           A  +   ++  GLKP+ 
Sbjct: 485 AHEVMNGIIESGLKPNA 501



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 109/252 (43%)

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D+  ++ ++ + V+   +  A+  +  ML+ G           + A      +E+A+ 
Sbjct: 149 LSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHR 208

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM    +     T  +L+  C K  +  E+  Y  Q   R L    ++++ +I+ +C
Sbjct: 209 LFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVC 268

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              +   A+ ++    + G+ P+E TY+ +IG   + G   E L+L  EM    +   + 
Sbjct: 269 RGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVA 328

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
             TSLI   C  G +  A + F  +    + P V I+  L+    + GN  KA  L   M
Sbjct: 329 VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRM 388

Query: 365 VSEGLKPSTSYL 376
              GL+P+   L
Sbjct: 389 KCMGLQPTVFIL 400



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/277 (19%), Positives = 119/277 (42%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L++  ++  +I E +   + ML   ++      ++++ A ++   +E A  +++EM +R 
Sbjct: 158 LLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERR 217

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + +     + A  + GK  EA     +    GLK    +++++I+   +   ++ + 
Sbjct: 218 IYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLAS 277

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              E       +PS   +  +I      GN  +A  +    +D     N    + LI GY
Sbjct: 278 KLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGY 337

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
              G++   L+L+ E+    ++P +  ++ LI    + G +E+A++ +  MK   L P V
Sbjct: 338 CVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTV 397

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            I   L+    ++     A  L +  V  G+    +Y
Sbjct: 398 FILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTY 434



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 59/135 (43%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ + +        L  + +LI  + K  +      +Y  ML     P+      L
Sbjct: 693 EAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVL 752

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LC  GQL+    +L  + G   +P V++  +LI    +E  ++E   L   ML K +
Sbjct: 753 INGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGL 812

Query: 125 IHDTIAYSLIVYAKV 139
           + D   Y ++V  K+
Sbjct: 813 VPDDTTYDILVNGKL 827


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 170/342 (49%), Gaps = 1/342 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ +F++   +++      L +++TLIH +  S   D   R+Y+ M EN   P+     T
Sbjct: 271 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 330

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++   + G+++  +++   +  + C  +V  N  LI  + +  +++E + + + +  K+
Sbjct: 331 MLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNI-LIRGLFENAKVDEAISIWELLPEKD 389

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D++ Y ++V+   K   L  AL + EE        ++F Y++ I   C  G+++E  
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVA 449

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ +M   G KP     N +I G  +A ++E++L +   M+S+   P+   +N +I  L
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGL 509

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +     +A  ++   L KG+ PN ITYS L+ G  +  ++   L L+ +   K   P +
Sbjct: 510 SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDV 569

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +  +I  LC  GK+E+A + +  MK    VP +  + +L+
Sbjct: 570 KMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 177/386 (45%), Gaps = 4/386 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           + F+ A ++  ++ ++GFS  + S+ TLI+ + K+       +++  M E    P+ A  
Sbjct: 163 KQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY 222

Query: 62  RTLISALCKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             LI    K G +    ++ +R+  G    P +     +I  + +  + +E   +  RM 
Sbjct: 223 NILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMK 282

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +     D   YS +++      NL+ A  VY+EM + G S +  VY T +  Y   G+IE
Sbjct: 283 KNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIE 342

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E   L + ME  G +    ++N+LI G  +  +++E++S  E +  +        +  ++
Sbjct: 343 ECLELWKVMEKEGCRTV-VSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLV 401

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G   +A  +L  A +     +   YS +I G  +EG + EV  +  +M      
Sbjct: 402 HGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCK 461

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P      ++I+   +  KLE+A ++F  M S    P V  Y +L+    +    ++A  L
Sbjct: 462 PNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYAL 521

Query: 361 CEEMVSEGLKPS--TSYLCSASTCRG 384
            +EM+ +G KP+  T  L     C+G
Sbjct: 522 VKEMLHKGWKPNMITYSLLMNGLCQG 547



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 2/275 (0%)

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           E    T+I A  K       +D+  R+H    C P +    SL+  +I+  + +E     
Sbjct: 78  EDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
                  +  +   Y++++    + +  + A  +   M ++GFS + F Y T I +  + 
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSA 235
           G + +A  L  EM   G+ P    +N+LI+G  K   I  +    E+++    + P+  +
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N MI  LC+CG   ++  +           +  TYS LI G    G +    ++Y EM 
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 317

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
              +SP +  Y ++++   + G++EE  + +K+M+
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 37/246 (15%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           V  T I AY +    ++A  + Q M E  G +P   ++N L+    ++ + +E+ S+   
Sbjct: 80  VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 139

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
             +  L P+   +N +I+  C      +A  +L    ++GFSP+  +Y  LI   AK G 
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199

Query: 284 IQEVLKLYYEMEYK------------------------------------SISPTLPAYT 307
           + + LKL+ EM  +                                    S+ P +P+Y 
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            +I+ LC+CGK +E+ + +  MK +     +  Y +L+      GN   A  + +EM   
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 368 GLKPST 373
           G+ P  
Sbjct: 320 GVSPDV 325



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/226 (21%), Positives = 100/226 (44%), Gaps = 2/226 (0%)

Query: 142 RNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           +N  SAL +++ + +  G+S   +V+   +    +   +   + +++ +     K  ++ 
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDV 80

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMS-RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
              +I+  AK    +++L   ++M       P   ++N ++  L E     +A       
Sbjct: 81  ALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF 140

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
              G SPN  TY+ LI    ++ +  +  +L   M  +  SP + +Y +LI+SL + G +
Sbjct: 141 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYM 200

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            +A K F  M    + P V  Y  L+    +KG+   A  + E ++
Sbjct: 201 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLL 246



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           P ++  + +I  YAK     + L ++  M E     P + +Y SL+++L +  K +EA+ 
Sbjct: 77  PEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +F   ++  L P +  Y  L+ I   K    KA  L   M  +G  P  
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDV 184


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 167/363 (46%), Gaps = 12/363 (3%)

Query: 13  YLEQR--GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           Y E R  G S  L + + L + +   +R          +L     PN  T  TLI  LC 
Sbjct: 114 YNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCM 173

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK------NM 124
             ++     +  R+    C+P  +   +LI  + Q   +   + L K ML        N 
Sbjct: 174 EHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNC 233

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               I YS+I+    K+   + A  ++EEM  +G   +   Y+T I  +C  GK +++  
Sbjct: 234 KPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKH 293

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM + G++P   TF++LI+   K  ++ E+    E M+ R ++P+   +N +I   C
Sbjct: 294 LFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+   A  +      KG  P+EI+Y+ LI GY K  +++E + LY EM     SP + 
Sbjct: 354 MVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +L+  L Q GK+ +A K F +MK++    GV     + GI L+   K   L    E+
Sbjct: 414 TYGTLLKGLFQKGKVGDAKKLFGVMKTY----GVSANSQIYGIFLDGLCKNDCLFEAMEL 469

Query: 365 VSE 367
            +E
Sbjct: 470 FNE 472



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 171/363 (47%), Gaps = 6/363 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           +RG+  +++++ TLI  +    R     R++  M +    PN  T  TLI  LC+ G   
Sbjct: 154 RRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVN 213

Query: 74  --LQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             L+ + +ML+    +G  C P VI  + +I  + +  R +E   L + M  + MI D I
Sbjct: 214 IALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVI 273

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +YS +++        + +  +++EM+ +G   +   ++  I   C+ GK+ EA  L++ M
Sbjct: 274 SYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM 333

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G+ P   T+N LI+G      +  +      M S+ L P   ++  +I   C+    
Sbjct: 334 IQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKV 393

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           K+A  +    L  G SPN  TY  L+ G  ++G++ +  KL+  M+   +S     Y   
Sbjct: 394 KEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIF 453

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC+   L EA + F  +KS++    ++ Y  L+    + G    A  L E++  EGL
Sbjct: 454 LDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGL 513

Query: 370 KPS 372
           +P 
Sbjct: 514 QPD 516



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 150/338 (44%), Gaps = 6/338 (1%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           +  +  M+ +   P  ++   L+  L K         + + +     SP +   + L   
Sbjct: 76  FHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANC 135

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           +    R+ E +  +  +LR+  I + + Y+ ++        +  A  ++  M K G + N
Sbjct: 136 LCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPN 195

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMEN------AGLKPYDETFNLLIEGCAKAKRIEE 216
           +  Y T I   C+ G +  A  L +EM N         KP   T++++I+G  K  R +E
Sbjct: 196 AVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDE 255

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +    E+M ++ ++P   +++ +I   C  G   Q+  +    +D+G  P+ +T+S LI 
Sbjct: 256 AKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLID 315

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              KEG++ E  KL   M  + I P L  Y SLI   C  G L  A + F  M S  L P
Sbjct: 316 TLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEP 375

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
               Y +L+  + +     +A++L  EM+  G  P+ +
Sbjct: 376 DEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 148/323 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G    +IS++TLIH    + + D    ++  M++    P+  T   LI  LCK G+
Sbjct: 263 MKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGK 322

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L+ +  +   P +I   SLI        +     L   M  K +  D I+Y+ 
Sbjct: 323 VTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTT 382

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   ++ A+ +Y EML+ G S N   Y T +    + GK+ +A  L   M+  G
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +    + + + ++G  K   + E++    ++ S     +   ++ +I  LC+ G  + A 
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAW 502

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +G  P+ +TY+ +I G+ K G++     L+ +ME    +P + AY +L+   
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562

Query: 314 CQCGKLEEADKYFKIMKSHSLVP 336
           C+  KLEE  K    M    + P
Sbjct: 563 CEGNKLEEVIKLLHKMVQKDVSP 585



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/353 (21%), Positives = 161/353 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I+++ +I  + K  R D    +++ M      P+  +  TLI   C  G+      + 
Sbjct: 236 GVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLF 295

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +  +   P ++  + LI  + +E ++ E   LL+ M+++ ++ + I Y+ ++     +
Sbjct: 296 DEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMV 355

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L SA  ++  M  +G   +   YTT I  YC+  K++EA  L  EM   G  P   T+
Sbjct: 356 GDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTY 415

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             L++G  +  ++ ++      M +  +  +   +   +  LC+     +A  +      
Sbjct: 416 GTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKS 475

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
             F  N   YS LI G  K G+++   +L+ ++  + + P +  Y  +I   C+ G+++ 
Sbjct: 476 YNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDN 535

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           A+  F+ M+ +   P +  Y +L+    E     + + L  +MV + + P+ +
Sbjct: 536 ANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAA 588



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 35/300 (11%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG   +LI++N+LI         +    ++  M      P+E +  TLI+  CK  +++
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++ + +     SP V    +L+  + Q+ ++ +   L   M    +  ++  Y + +
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   L  A+ ++ E+    F  N   Y+  I   C+ GK+E A  L +++   GL+
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N++I G  K  +++ +    E+M      P   A+N ++   CE GN       
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCE-GN------- 566

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                                      +++EV+KL ++M  K +SP   + T ++  LC+
Sbjct: 567 ---------------------------KLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LFE A ++   L+   F L++ +++ LI  + K+ + +  W +++ + +    P+  T  
Sbjct: 463 LFE-AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYN 521

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +I   CK GQ+     + +++    C+P +I   +L+    +  ++EE + LL +M++K
Sbjct: 522 IMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK 581

Query: 123 NMIHDTIAYSLIV 135
           ++  +  + +++V
Sbjct: 582 DVSPNAASCTIVV 594



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 65/153 (42%)

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           ++  + + MM    +P  S+FN ++  L +  +  Q   +       G SP+  T S L 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
                   + E L     +  +   P +  YT+LI  LC   ++ EA + F  M+     
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           P    Y +L+    + GN   AL L +EM+++ 
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDA 226



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 58/116 (50%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A+++   L Q G    ++++N +IH   K  + D    +++ M EN   P+     T
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           L+   C+G +L+  + +L ++  K  SP     T ++  + ++E+ ++ + LL + 
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKF 613



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/75 (24%), Positives = 42/75 (56%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G +  +I++NTL+    + ++ + V ++   M++    PN A+   ++  LCK  +
Sbjct: 543 MEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602

Query: 74  LQTYVDMLDRIHGKR 88
            + +VD+L +   +R
Sbjct: 603 YKKFVDLLPKFPVQR 617


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 188/407 (46%), Gaps = 41/407 (10%)

Query: 7   AFDVCRYLEQR-----GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
             D+CR + +       + L +  +NTL++ + +    D + ++Y  MLE+   PN  T 
Sbjct: 162 VLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +++  CK G ++     +  I      P     TSLI+   Q + ++    + K M  
Sbjct: 222 NKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPL 281

Query: 122 KNMIHDTIAYSLIVYAK-------------VKMRNLE----------------------S 146
           K    + +AY+ +++               VKM++ +                       
Sbjct: 282 KGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSE 341

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL + +EM ++G   N   YT  I + C   K+E+A  L+ +M   GL P   T+N LI 
Sbjct: 342 ALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALIN 401

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K   IE++L   E M SR L P+   +NE+I+  C+  N  +A G+L   L++   P
Sbjct: 402 GYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLP 460

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + +TY+ LI G  + G      +L   M  + + P    YTS+I SLC+  ++EEA   F
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLF 520

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             ++   ++P V +Y +L+  + + G   +A  + E+M+S+   P++
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNS 567



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 174/369 (47%), Gaps = 7/369 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + +E++G   ++ ++  LI  +    + +    +   MLE    PN  T   LI+
Sbjct: 342 ALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALIN 401

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ---EERIEEGMVLLKRMLRKN 123
             CK G ++  +D+++ +  +   P    NT     +I+   +  + + M +L +ML + 
Sbjct: 402 GYCKRGMIEDALDVVELMESRNLRP----NTRTYNELIKGYCKRNVHKAMGVLNKMLERK 457

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D + Y+ ++  + +  N +SA  +   M  RG   + + YT+ I + C+  ++EEA 
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   +E   + P    +  LI+G  KA ++ E+    E+M+S+  LP+   FN +I  L
Sbjct: 518 DLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G  K+A  +    +     P   T + LI    K+G+     + + +M      P  
Sbjct: 578 CTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDA 637

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT+ I + C+ G+L++A+     MK + + P +  Y SL+  + + G    A  + + 
Sbjct: 638 HTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKR 697

Query: 364 MVSEGLKPS 372
           M   G +PS
Sbjct: 698 MHDTGCEPS 706



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 167/370 (45%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + AF V + +  +G   + +++  LIH +    R D    ++  M ++  YP   T   
Sbjct: 269 LDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTV 328

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI ALC   +    ++++  +  K   P +   T LI  +  + ++E+   LL +ML K 
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + I Y+ ++    K   +E AL V E M  R    N+  Y   I  YC+   + +A 
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAM 447

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ +M    + P   T+N LI+G  ++   + +      M  R L+P    +  MI  L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSL 507

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+    ++A  +      K   PN + Y+ LI GY K G++ E   +  +M  K+  P  
Sbjct: 508 CKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNS 567

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             + +LI  LC  GKL+EA    + M    L P V     L+   L+ G+   A    ++
Sbjct: 568 LTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQ 627

Query: 364 MVSEGLKPST 373
           M+S G KP  
Sbjct: 628 MLSSGTKPDA 637



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 160/389 (41%), Gaps = 20/389 (5%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A DV   +E R    +  ++N LI    K + +  +  +   MLE    P+  T  
Sbjct: 408 MIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMG-VLNKMLERKVLPDVVTYN 466

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +LI   C+ G   +   +L  ++ +   P     TS+I  + + +R+EE   L   + +K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           ++I + + Y+ ++    K   +  A ++ E+ML +    NS  +   I   C  GK++EA
Sbjct: 527 DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L ++M    L+P   T  +LI    K    + +    +QM+S    P    +   I+ 
Sbjct: 587 TLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQT 646

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C  G  + A  M+    + G SP+  TYS LI GY   G       +   M      P+
Sbjct: 647 YCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPS 706

Query: 303 LPAYTSLISSL---------------CQCGKLEEAD---KYFKIMKSHSLVPGVDIYESL 344
              + SLI  L               C    + E D   +  + M  H + P    YE L
Sbjct: 707 QHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKL 766

Query: 345 VGIHLEKGNKAKALHLCEEMVS-EGLKPS 372
           +    E GN   A  + + M   EG+ PS
Sbjct: 767 MLGICEIGNLRVAEKVFDHMQQKEGISPS 795



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 141/326 (43%), Gaps = 35/326 (10%)

Query: 14  LEQRGFSLSL---ISFNT-LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           LE++   + L   +S +T LIH + K    D  +R +Q ML +   P+  T  T I   C
Sbjct: 589 LEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYC 648

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT- 128
           + G+LQ   DM+ ++     SP +   +SLI       R     V+LKRM      HDT 
Sbjct: 649 REGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM------HDTG 702

Query: 129 ------IAYSLIV------YAKVK-----------MRNLESALVVYEEMLKRGFSANSFV 165
                    SLI       Y KVK           M   +  + + E+M++ G + N+  
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKS 762

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENA-GLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           Y   +   CE G +  A  +   M+   G+ P +  FN L+  C K ++  E+    + M
Sbjct: 763 YEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDM 822

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +    LP   +   +I RL + G  ++   +    L  G+  +E+ +  +I G  K+G +
Sbjct: 823 ICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLV 882

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLI 310
           +   +L+  ME    + +   Y+ LI
Sbjct: 883 EAFYELFNVMEKNGCTFSSQTYSLLI 908


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 167/351 (47%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+++FN +I+++ +  +         HM      PN  T  T+I+  C  G+ +    + 
Sbjct: 216 SIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIF 275

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K   P      S I R+ +E RIEE   +L ++L   ++ + + Y+ ++      
Sbjct: 276 KTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNK 335

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L+ A    +EM+ RG  A+ F Y   I A     +IEEA  +++EM   G++P   T+
Sbjct: 336 GDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTY 395

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+ I G  +    +++LS  ++M+ + + P+   +  +I    +     +A      ++ 
Sbjct: 396 NIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIK 455

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  P+ I ++ LI G+   G I    +L  EM+   + P    + +L+   C+  K+EE
Sbjct: 456 EGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEE 515

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A K    MK   + P    Y +L+  + ++G+   AL + +EM+S G  P+
Sbjct: 516 AKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 158/338 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  + + ++ +       ++N+ I  + K  R +    +   +LE+   PN  T   
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C  G L       D +  +     V     LI  +  E+RIEE   ++K M  K 
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y++ +    +  N + AL +++EM+++        YT+ I  + +  ++ EA 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
              ++    G+ P    FN LI+G      I+ +    ++M + K++P    FN +++  
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     ++A  +L    ++G  P+ I+Y+ LI GY+K G++++ L+++ EM      PTL
Sbjct: 508 CRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTL 567

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             Y +LI    + G+ + A++  + M+S  + P    Y
Sbjct: 568 LTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 5/283 (1%)

Query: 95  VNTSLILRII-----QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           V T+L+  ++     Q  + +E +  L  M    +I  T   + ++   +K+  ++ A  
Sbjct: 144 VKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWF 203

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           VYEEM+K    ++   +   I   C  GK ++A   +  ME  G+KP   T+N +I G  
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
              + E +    + M  + L P C  +N  I RLC+    ++A+G+L   L+ G  PN +
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ LI G   +G++ +      EM  + I  ++  Y  LI +L    ++EEA+   K M
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +   + P V  Y   +  +   GN  KAL L +EMV + ++P+
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 127/271 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG   S+ ++N LIH +    R +    + + M E    P+  T    I+  C+ G  +
Sbjct: 350 NRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAK 409

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + + D +  K   P V   TSLI    +  R+ E     K+ +++ M+ D I ++ ++
Sbjct: 410 KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALI 469

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                  N++ A  + +EM       +   + T +  YC   K+EEA  L+ EM+  G+K
Sbjct: 470 DGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIK 529

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N LI G +K   ++++L   ++M+S    P+   +N +I+   + G A  A  +
Sbjct: 530 PDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEEL 589

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           L     KG +P++ TY ++I       ++ E
Sbjct: 590 LREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 171/357 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   L++F +L+H     +R +    ++  ++     PN  T  TLI  LCK   L   
Sbjct: 147 GFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHA 206

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V++ +++      P V+   SL+  + +  R  +   LL+ M+++ +  + I ++ ++ A
Sbjct: 207 VEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDA 266

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK+  +  A  +Y+ M++     + F YT  I   C YG+++EA  +   ME+ G  P 
Sbjct: 267 FVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPN 326

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           + T+  LI G  K+KR+E+      +M  + L+ +   +  +I+  C  G    A  +  
Sbjct: 327 EVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFN 386

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +   P+  TY+ L+ G    G +++ L ++  M  + +   +  YT +I  +C+ G
Sbjct: 387 QMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVG 446

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           K+E+A   F  + S  + P V  Y +++     +G   +A  L ++M  +G  P+ S
Sbjct: 447 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNES 503



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 142/303 (46%), Gaps = 4/303 (1%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           Q    +D+  R+   R  P ++  T L+  I + +R +  + L ++M    +    + Y+
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGI--SPVLYT 119

Query: 133 LIVYAKVKMRNLES--ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
             +      R+ +   A     +M+K GF  +   +T+ +  +C + +IE+A  L  ++ 
Sbjct: 120 CNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G +P   T+  LI    K + +  ++    QM    + P+   +N ++  LCE G   
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +L   + +G  PN IT++ LI  + K G+I E  +LY  M   S+ P +  YT+LI
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           + LC  G+L+EA + F +M+S+   P    Y +L+    +         +  EM  +GL 
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359

Query: 371 PST 373
            +T
Sbjct: 360 ANT 362



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 146/355 (41%), Gaps = 35/355 (9%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           ++  M+ +   P+      L+S + K  +    + + +++     SP++     ++  + 
Sbjct: 69  LFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVC 128

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +  +       L +M++     D + ++ +++       +E AL ++++++  GF  N  
Sbjct: 129 RSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVV 188

Query: 165 VYTTFI-----------------------------------GAYCEYGKIEEANCLMQEM 189
            YTT I                                      CE G+  +A  L+++M
Sbjct: 189 TYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDM 248

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G++P   TF  LI+   K  +I E+    + M+   + P    +  +I  LC  G  
Sbjct: 249 MKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRL 308

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  M  L    G+ PNE+TY+ LI G+ K   +++  K++YEM  K +      YT L
Sbjct: 309 DEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVL 368

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           I   C  G+ + A + F  M S    P +  Y  L+      G   KAL + + M
Sbjct: 369 IQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYM 423



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 35/290 (12%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +RG   ++I+F  LI    K  +      +Y+ M++   YP+  T   LI+ LC  
Sbjct: 246 RDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTY 305

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+L     M   +      P  +  T+LI    + +R+E+G  +   M +K ++ +TI  
Sbjct: 306 GRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTIT- 364

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
                                             YT  I  YC  G+ + A  +  +M +
Sbjct: 365 ----------------------------------YTVLIQGYCLVGRPDVAQEVFNQMGS 390

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
               P   T+N+L++G      +E++L   + M  R++  +   +  +I+ +C+ G  + 
Sbjct: 391 RRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVED 450

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           A  +      KG  PN ITY+ +I G+ + G I E   L+ +M+     P
Sbjct: 451 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLP 500


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 166/349 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            S+N +I  + +S +     +++  M++    PN  T  T+I    KGG L+    + D+
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQ 254

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P V+    L+  + +  R++E   L+  M   +M+ D   YS++     +   
Sbjct: 255 MLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGE 314

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            ++ L ++ E LK+G    ++  +  +   C+ GK+ +A  + + + + GL P    +N 
Sbjct: 315 SQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNT 374

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  + + +  +    EQM SR + P    +N +I  LC+     +A  ++      G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+  T++ LI  Y   G++++   +  +M+ K I   + ++ S++ + C+ GK+ EA 
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                M    + P   +Y S++  ++E G+  +AL L E+M + G+  S
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSAS 543



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 174/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F +   +   G   +++++N L+  + ++ R D    +   M  +   P+  T   
Sbjct: 245 LEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSI 304

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L   L + G+ QT + +      K         + L+  + ++ ++ +   + + ++   
Sbjct: 305 LFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTG 364

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++  T+ Y+ ++    ++R+L  A  ++E+M  R    +   Y   I   C+   + +A 
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 424

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EME +G+ P  ETFN LI+    A ++E+  +    M  + +     +F  +++  
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +L   + K  +PN   Y+ +I  Y + G+ ++ L L  +M+   +S ++
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASI 544

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  L+  LC+  +++EA++    +++  L P V  Y +++     KG+  KAL L +E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 364 MVSEGLKPS 372
           M   G++P+
Sbjct: 605 MNKYGIRPT 613



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 166/354 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G  L   + + L++ + K  +     ++++ ++     P      TLI+  C+   L+
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + +++  +   P  I   +LI  + + E + +   L+  M +  +      ++ ++
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A      LE    V  +M ++G  ++   + + + A+C+ GKI EA  ++ +M    + 
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  + +N +I+   ++   E++L   E+M +  +  S   +N +++ LC      +A  +
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    ++G  P+ ++Y+ +I     +G+  + L+L  EM    I PTL    +L+S+L  
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALAS 626

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            G++ + +  ++ M   ++ P   IY  +V  ++   N +K   L +EM  +G+
Sbjct: 627 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 2/266 (0%)

Query: 109 IEEGMVLLKRMLRKNMIH--DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           ++  + +L+RM R       D  +Y++++    +      AL V++EM+  G + N   Y
Sbjct: 173 LDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITY 232

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
            T I  + + G +E    L  +M + G KP   T+N+L+ G  +  R++E+ +  ++M S
Sbjct: 233 NTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMAS 292

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
             +LP    ++ +   L   G ++    +   +L KG      T S L+ G  K+G++ +
Sbjct: 293 HSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             +++  + +  + PT   Y +LI+  CQ   L  A   F+ MKS  + P    Y +L+ 
Sbjct: 353 AKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              +     KA  L  EM   G+ PS
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPS 438



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 136/306 (44%), Gaps = 12/306 (3%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIH------VVTKSDRNDLVWRIYQHMLENIR 54
           +R    AF +   ++ R      I++N LI+      +VTK++  DLV  + +  ++   
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE--DLVMEMEKSGVD--- 436

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
            P+  T  TLI A    GQL+    +L  +  K     VI   S++    +  +I E + 
Sbjct: 437 -PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           +L  M+ K++  +   Y+ I+ A ++  + E AL++ E+M   G SA+   Y   +   C
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLC 555

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
              +I+EA  L+  + N GL+P   ++N +I  C      +++L   ++M    + P+  
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             + ++  L   G       +    L K   P+   Y  ++  Y +     +V  L  EM
Sbjct: 616 TCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 675

Query: 295 EYKSIS 300
             K I+
Sbjct: 676 SEKGIA 681



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 3/189 (1%)

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF--NEMIRRLCECGNA 249
           AG +P    +N +++ C  A  ++ +L+   +M   +  P   AF  N +I  L   G  
Sbjct: 151 AGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKG 210

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +    +D G +PN ITY+ +I G+ K G+++   +L  +M +    P +  Y  L
Sbjct: 211 SDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVL 270

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +S LC+ G+++E       M SHS++P    Y  L       G     L L  E + +G+
Sbjct: 271 LSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGV 330

Query: 370 KPSTSYLCS 378
               +Y CS
Sbjct: 331 MLG-AYTCS 338


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 156/324 (48%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +LE    P+      LI+  CK  ++     +LDR+  K  SP  +    +I  +    +
Sbjct: 145 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 204

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           ++  + +L ++L  N     I Y++++ A +    ++ AL + +EML RG   + F Y T
Sbjct: 205 LDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNT 264

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C+ G ++ A  +++ +E  G +P   ++N+L+       + EE      +M S K
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   ++ +I  LC  G  ++A  +L L  +KG +P+  +Y  LI  + +EG +   +
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 384

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +    M      P +  Y +++++LC+ GK ++A + F  +      P    Y ++    
Sbjct: 385 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 444

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
              G+K +ALH+  EMVS G+ P 
Sbjct: 445 WSSGDKIRALHMILEMVSNGIDPD 468



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 152/304 (50%), Gaps = 1/304 (0%)

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G     + +L+ +  K  +P VI+ T LI        + + + +++ +L K    D 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME-ILEKFGQPDV 154

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            AY+ ++    KM  ++ A  V + M  + FS ++  Y   IG+ C  GK++ A  ++ +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           + +   +P   T+ +LIE       ++E+L   ++M+SR L P    +N +IR +C+ G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  M+     KG  P+ I+Y+ L+     +G+ +E  KL  +M  +   P +  Y+ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI++LC+ GK+EEA    K+MK   L P    Y+ L+     +G    A+   E M+S+G
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 369 LKPS 372
             P 
Sbjct: 395 CLPD 398



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 181/436 (41%), Gaps = 73/436 (16%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R    A  V   LE+ G    + ++N LI+   K +R D   R+   M      P+  T
Sbjct: 133 LRNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVT 191

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I +LC  G+L   + +LD++    C P VI  T LI   + E  ++E + LL  ML
Sbjct: 192 YNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEML 251

Query: 121 RKNMIHDTIAYSLIVYAKVK----------MRNLE-----SALVVY-------------- 151
            + +  D   Y+ I+    K          +RNLE       ++ Y              
Sbjct: 252 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWE 311

Query: 152 --EEMLKRGFS----ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
             E+++ + FS     N   Y+  I   C  GKIEEA  L++ M+  GL P   +++ LI
Sbjct: 312 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 371

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA------------- 252
               +  R++ ++ + E M+S   LP    +N ++  LC+ G A QA             
Sbjct: 372 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 431

Query: 253 ------NGMLTL----------------ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
                 N M +                  +  G  P+EITY+ +I    +EG + +  +L
Sbjct: 432 PNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFEL 491

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHL 349
             +M      P++  Y  ++   C+  ++E+A      M  +   P    Y  L+ GI  
Sbjct: 492 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGF 551

Query: 350 EKGNKAKALHLCEEMV 365
             G +A+A+ L  ++V
Sbjct: 552 -AGYRAEAMELANDLV 566



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 34/169 (20%)

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEI---------------------------- 269
           ++  R C  GN  ++  +L   + KG++P+ I                            
Sbjct: 90  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKF 149

Query: 270 ------TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
                  Y+ LI G+ K   I +  ++   M  K  SP    Y  +I SLC  GKL+ A 
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K    + S +  P V  Y  L+   + +G   +AL L +EM+S GLKP 
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPD 258


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 175/371 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+V   +   +   G ++++  FN++I    K    D    + + M E    P+  T   
Sbjct: 291 FQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNI 350

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  C GG+++   + L+R   +   P     T L+    ++        +L ++    
Sbjct: 351 LINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETG 410

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D ++Y   ++  V    ++ AL+V E+M+++G   ++ +Y   +   C+ G+   A 
Sbjct: 411 DKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAK 470

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM +  L+P    +  L++G  +   ++++    E +MS+ + P    +N MI+ L
Sbjct: 471 LLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGL 530

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+CG    A   +        +P+E T+S +I GY K+ ++   LK++ +M  +   P +
Sbjct: 531 CKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV 590

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            AYTSLI+  C+   +  A+K F+ M+S +L P V  Y  L+G   + G   KA    E 
Sbjct: 591 VAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFEL 650

Query: 364 MVSEGLKPSTS 374
           M+     P+ +
Sbjct: 651 MLMNNCLPNDT 661



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 160/357 (44%), Gaps = 6/357 (1%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLEN------IRYPNEATIRTLISALCKGGQLQT 76
           +++ N+L++ + K+ + D+   +Y  MLE           +  +I  ++  LC  G+++ 
Sbjct: 164 VVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEE 223

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++D   G  C P V+    +I    ++  ++    + + +  K  +     Y  ++ 
Sbjct: 224 GRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALID 283

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K    +    +  EM   G + N  V+ + I A  +YG +++A  +M+ M   G +P
Sbjct: 284 GFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEP 343

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N+LI       RI+E+  + E+   R LLP+  ++  ++   C+ G+   A+ ML
Sbjct: 344 DITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDML 403

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               + G  P+ ++Y   I G    GEI   L +  +M  K + P    Y  L+S LC+ 
Sbjct: 404 FKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKK 463

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G+   A      M   +L P   +Y +LV   +      KA  L E ++S+G+ P  
Sbjct: 464 GRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGV 520



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 157/352 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ +N +I    K        R+++ +      P   T   LI   CK G+ Q    +L
Sbjct: 239 NVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLL 298

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + ++    +  V V  S+I    +   +++   +++ M       D   Y++++      
Sbjct: 299 NEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSG 358

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A    E   +R    N F YT  + AYC+ G    A+ ++ ++   G KP   ++
Sbjct: 359 GRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSY 418

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
              I G      I+ +L   E+MM + + P    +N ++  LC+ G    A  +L+  LD
Sbjct: 419 GAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLD 478

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
               P+   Y+ L+ G+ +  E+ +  +L+  +  K I P +  Y  +I  LC+CGK+ +
Sbjct: 479 LNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTD 538

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A  Y   MK  +  P    + +++  ++++ +   AL +  +M+ +  KP+ 
Sbjct: 539 AVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV 590



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 149/378 (39%), Gaps = 47/378 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           + +A D+   + + G    L+S+   IH        D+   + + M+E   +P+      
Sbjct: 396 YVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNV 455

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+S LCK G                                   R     +LL  ML  N
Sbjct: 456 LMSGLCKKG-----------------------------------RFPAAKLLLSEMLDLN 480

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   Y+ +V   ++   L+ A  ++E ++ +G       Y   I   C+ GK+ +A 
Sbjct: 481 LQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAV 540

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             + +M+ A   P + T + +I+G  K   ++ +L    QMM +K  P+  A+  +I   
Sbjct: 541 SYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGF 600

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+  +  +A  +          PN +TY+ LIGG++K G+ ++    +  M   +  P  
Sbjct: 601 CKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPND 660

Query: 304 PAYTSLISSLCQCG-------KLEEADK-----YFKIMKSHSLVPGVDIYESLVGIHLEK 351
             +  LI+ L           K EE D+     +F  M S      +  Y S++    + 
Sbjct: 661 TTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKH 720

Query: 352 GNKAKALHLCEEMVSEGL 369
           G    A  L  +M+ +G 
Sbjct: 721 GMVDTAQLLQTKMLRKGF 738



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 28/267 (10%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA---- 182
           + +AYS ++   VK R      +V E+M  R F        + I  Y EYG +++A    
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151

Query: 183 -------NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR------KL 229
                  NC    + N          N L+    K  +++ +    ++M+ R       L
Sbjct: 152 YMVCELYNCFPCVVAN----------NSLLNCLVKNGKVDVACELYDKMLERGGDHGLDL 201

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           +    +   +++ LC+ G  ++   ++      G  PN + Y+ +I GY K+G+++   +
Sbjct: 202 VVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATR 261

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           ++ E++ K   PTL  Y +LI   C+ GK +  D+    M    L   V ++ S++    
Sbjct: 262 VFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKY 321

Query: 350 EKGNKAKALHLCEEMVSEGLKPS-TSY 375
           + G   KA  +   M   G +P  T+Y
Sbjct: 322 KYGLVDKAAEMMRMMTEMGCEPDITTY 348


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 186/370 (50%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ +   L++RG   S++SFN+++  + K  + D    +++ M ++   PN +T   
Sbjct: 338 FENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAE-PNSSTYNI 396

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC  G+++    + D +      P ++    ++ R+ + ++ E    + +   ++ 
Sbjct: 397 IIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRG 456

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +++ Y  ++    K  N++ A  ++E ML  G +AN  VYT+ I  +  +G+ E+ +
Sbjct: 457 CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGH 516

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM   G +P     N  ++   KA  +E+  +  E +     LP   +++ +I  L
Sbjct: 517 KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 576

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A++ + +      +GF+ +   Y+ ++ G+ K G++ +  ++  EM+ K + PT+
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS  +   V +Y SL+    + G   +A  + EE
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696

Query: 364 MVSEGLKPST 373
           M+ +GL P+ 
Sbjct: 697 MMKKGLTPNV 706



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 178/371 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+++     QRG + + +++ +LI  + K    D  +R++++ML+     N     +
Sbjct: 442 FEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTS 501

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI      G+ +    +   ++ + C P + +  + +  + +   +E+G  + + +    
Sbjct: 502 LIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYG 561

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + D  +YS++++   K         ++  M ++GF+ ++  Y   +  +C+ GK+++A 
Sbjct: 562 FLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAY 621

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++EM+   + P   T+  +I+G AK  R++E+    E+  S+ +  +   ++ +I   
Sbjct: 622 EVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGF 681

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G   +A  +L   + KG +PN  T++ L+    K  EI E L  +  M+    SP  
Sbjct: 682 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNT 741

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI+ LC+  K  +A  +++ M+   LVP V  Y +++    + GN   A  L E 
Sbjct: 742 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFER 801

Query: 364 MVSEGLKPSTS 374
             + G  P  +
Sbjct: 802 FKANGGTPDAA 812



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 155/336 (46%), Gaps = 4/336 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++ +N  I    K+   D+ W+ +  +      P++ +  ++I  LCK G+L    ++ 
Sbjct: 251 DIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELF 310

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  +R  P      ++I+      + E    LL ++  +  I   ++++ I+    K 
Sbjct: 311 GQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKK 370

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           R ++ AL ++E M K+    NS  Y   I   C  GK+EEA  +  EME+AGL P   T 
Sbjct: 371 RKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTV 429

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++   KAK+ E +    E    R   P+   +  +I  L + GN   A  +    LD
Sbjct: 430 NIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLD 489

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G + N + Y+ LI  +   G  ++  K++ EM  +   P L    + +  + + G +E+
Sbjct: 490 TGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEK 549

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIH-LEKGNKAK 356
               F+ +K +  +P V  Y  L  IH L K  +A+
Sbjct: 550 GRAIFEDIKGYGFLPDVRSYSIL--IHGLTKAGQAR 583



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 166/373 (44%), Gaps = 8/373 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A+ +   +E  G   +L++ N ++  + K+ + +  + +++   +    PN  T  +L
Sbjct: 408 EEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSL 467

Query: 65  ISALCKGGQLQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           I  L K G +      + +MLD   G   +P  +V TSLI       R E+G  + K M 
Sbjct: 468 IDGLGKKGNVDDAYRLFENMLDT--GHNANP--VVYTSLIRNFFMHGRKEDGHKIFKEMN 523

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R+    D    +  +    K  ++E    ++E++   GF  +   Y+  I    + G+  
Sbjct: 524 RRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQAR 583

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E + +   M+  G       +N +++G  K+ +++++    E+M  +++ P+ + +  +I
Sbjct: 584 ETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSII 643

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L +     +A  +   A  KG   N I YS LI G+ K G I E   +  EM  K ++
Sbjct: 644 DGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 703

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  + SL+ +L +  ++ EA   F+ MK     P    Y  L+          KA   
Sbjct: 704 PNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVF 763

Query: 361 CEEMVSEGLKPST 373
            +EM  +GL P+ 
Sbjct: 764 WQEMQKQGLVPNV 776



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 144/305 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   + S++ LIH +TK+ +      I+  M +     +      ++   CK G+L   
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++L+ +  KR  P V    S+I  + + +R++E  +L +    K +  + I YS ++  
Sbjct: 621 YEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 680

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A ++ EEM+K+G + N + + + + A  +  +I EA    Q M+     P 
Sbjct: 681 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 740

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI G  + ++  ++  + ++M  + L+P+   +  MI  L + GN   A  +  
Sbjct: 741 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFE 800

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G +P+  +++ LI G +      E   ++ E   K     + A  SL+ +L +  
Sbjct: 801 RFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAE 860

Query: 318 KLEEA 322
            LE+A
Sbjct: 861 CLEQA 865



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 157/353 (44%), Gaps = 5/353 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+ +   +   L+  + ++ R D   R+   M      P  +    LI A+ +  Q +  
Sbjct: 142 GYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERA 201

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L ++        V + T+L+  + +E R+E  + L+  +    +  D + Y++ +  
Sbjct: 202 LELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDC 261

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  N++ A   + E+  +G   +   YT+ I   C+ G++ EA  L  +ME     P 
Sbjct: 262 FGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPC 321

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N +I G   A + E +    +Q+  R  +PS  +FN ++  L   G  ++ +  LT
Sbjct: 322 AYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCL---GKKRKVDEALT 378

Query: 258 L--ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L  A+ K   PN  TY+ +I      G+++E   +  EME+  + P L     ++  LC+
Sbjct: 379 LFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCK 438

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             K E A + F+        P    Y SL+    +KGN   A  L E M+  G
Sbjct: 439 AKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTG 491



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/401 (20%), Positives = 167/401 (41%), Gaps = 36/401 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A+     L+ +G     +S+ ++I V+ K+ R      ++  M      P      T+
Sbjct: 269 DMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I      GQ +    +LD++  + C P V+   S++  + ++ +++E + L + M +K+ 
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDA 387

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             ++  Y++I+        +E A ++ +EM   G   N       +   C+  K E A  
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM-------------------- 224
           + +     G  P   T+  LI+G  K   ++++    E M                    
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507

Query: 225 MSRKLLPSCSAFNEMIRRLCE---------------CGNAKQANGMLTLALDKGFSPNEI 269
           M  +       F EM RR C+                G+ ++   +       GF P+  
Sbjct: 508 MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 567

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           +YS LI G  K G+ +E   +++ M+ +  +    AY +++   C+ GKL++A +  + M
Sbjct: 568 SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM 627

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           K   + P V  Y S++    +     +A  L EE  S+G++
Sbjct: 628 KVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIE 668



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 114/239 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++Q+GF+L   ++N ++    KS + D  + + + M      P  AT  ++I  L K  +
Sbjct: 592 MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDR 651

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     + +    K     VIV +SLI    +  RI+E  ++L+ M++K +  +   ++ 
Sbjct: 652 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 711

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A VK   +  AL+ ++ M +   S N++ Y+  I   C   K  +A    QEM+  G
Sbjct: 712 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 771

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           L P   T+  +I G AK   I ++ S  E+  +    P  ++FN +I  +     A +A
Sbjct: 772 LVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEA 830



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 133/276 (48%), Gaps = 1/276 (0%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             L+  +++  R+++   ++  M R        AY++++ A  + R  E AL +  +M +
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G+     ++TT + A    G++E A  L+ E++ + L+P    +N+ I+   KA  ++ 
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 270

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +  +  ++ S+ L P   ++  MI  LC+ G   +A  +      +   P    Y+ +I 
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIM 330

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           GY   G+ +   KL  +++ +   P++ ++ S+++ L +  K++EA   F+ MK  +  P
Sbjct: 331 GYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EP 389

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               Y  ++ +    G   +A  + +EM   GL P+
Sbjct: 390 NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 108/242 (44%)

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V A V+ R L+ A  V   M +  F      YT  IGA  E  + E A  L+++M+  G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +     F  L+   A+  R+E +L+  +++    L P    +N  I    + GN   A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                   +G  P++++Y+ +I    K G + E  +L+ +ME +   P   AY ++I   
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              G+ E A K    +K    +P V  + S++    +K    +AL L E M  +    S+
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSS 392

Query: 374 SY 375
           +Y
Sbjct: 393 TY 394



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 102/235 (43%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V EEM   G+   +      + A     ++++A  ++  M     +P    + +LI   A
Sbjct: 134 VLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMA 193

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +A++ E +L    QM           F  ++R L   G  + A  ++         P+ +
Sbjct: 194 EARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIV 253

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+  I  + K G +    K ++E++ + + P   +YTS+I  LC+ G+L EA++ F  M
Sbjct: 254 LYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM 313

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
           ++   VP    Y +++  +   G    A  L +++   G  PS     S  TC G
Sbjct: 314 ETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLG 368



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 100/217 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++V   ++ +    ++ ++ ++I  + K DR D  + +++         N     +LI 
Sbjct: 620 AYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLID 679

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +L+ +  K  +P V    SL+  +++ E I E ++  + M       
Sbjct: 680 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP 739

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T  YS+++    +++    A V ++EM K+G   N   YTT I    + G I +A  L 
Sbjct: 740 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLF 799

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           +  +  G  P   +FN LIEG + A R  E+    E+
Sbjct: 800 ERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEE 836


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 188/368 (51%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A+++ + + + G  +++ + N +I+ + K+ + +        M E   +P+  T  TL
Sbjct: 79  DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 138

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+A C+ G L+   +++D + GK   P V    ++I  + +  +      +L  ML+  M
Sbjct: 139 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 198

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DT  Y++++    +  N+  A  +++EM  +G   +   ++  IG   + G +++A  
Sbjct: 199 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 258

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             ++M+NAGL P +  + +LI G  +   + E+L   ++M+ +  +     +N ++  LC
Sbjct: 259 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 318

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A+ + T   ++G  P+  T++ LI GY+K+G + + + L+  M  +++ P + 
Sbjct: 319 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 378

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI   C+  ++E+ ++ +  M S  + P    Y  L+  +   G  ++A  L +EM
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438

Query: 365 VSEGLKPS 372
           V +G + +
Sbjct: 439 VEKGFEAT 446



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 168/362 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G    L+SF+ LI +++K+   D   + ++ M      P+      LI   C+ G 
Sbjct: 228 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 287

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + + D +  + C   V+   +++  + +E+ + E   L   M  + +  D   ++ 
Sbjct: 288 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 347

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  N+  A+ ++E M++R    +   Y T I  +C+  ++E+ N L  +M +  
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 407

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++ +LI G      + E+    ++M+ +    +    N +++  C  GNA +A+
Sbjct: 408 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 467

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             L+  L KG  P+ ITY+ LI G+ KE  +     L  +ME   + P +  Y  +++  
Sbjct: 468 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 527

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G+++EA+     M    + P    Y SL+  H+ + N  +A  + +EM+  G  P  
Sbjct: 528 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587

Query: 374 SY 375
            +
Sbjct: 588 KF 589



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 170/371 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF++   +  +G    + ++N +I+ + K+ +      +   ML+    P+ AT  
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 206

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   C+   +     + D +  +   P ++  ++LI  + +   +++ +   + M   
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 266

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y++++    +   +  AL V +EML++G   +   Y T +   C+   + EA
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  EM   G+ P   TF  LI G +K   + ++++  E M+ R L P    +N +I  
Sbjct: 327 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 386

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+    ++ N +    + +   PN I+Y  LI GY   G + E  +L+ EM  K    T
Sbjct: 387 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 446

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +    +++   C+ G   +AD++   M    +VP    Y +L+   +++ N  +A  L  
Sbjct: 447 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 506

Query: 363 EMVSEGLKPST 373
           +M + GL P  
Sbjct: 507 KMENSGLLPDV 517



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 138/280 (49%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           C    +V   L+   +Q  ++ EG    + +  K +     A + ++   VK+  ++ A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            +Y+E+++ G   N +     I A C+  KIE     + +ME  G+ P   T+N LI   
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +   +EE+    + M  + L P    +N +I  LC+ G   +A G+L   L  G SP+ 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
            TY+ L+    +   + +  +++ EM  + + P L ++++LI  L + G L++A KYF+ 
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           MK+  L P   IY  L+G     G  ++AL + +EM+ +G
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 111/247 (44%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + + L+V   V+ R L      +  +  +G   +     + +G   + G ++ A  + 
Sbjct: 26  NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QE+  +G++    T N++I    K ++IE + S+   M  + + P    +N +I   C  
Sbjct: 86  QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  ++     KG  P   TY+ +I G  K G+      +  EM    +SP    Y
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+   C+   + +A++ F  M S  +VP +  + +L+G+  + G   +AL    +M +
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265

Query: 367 EGLKPST 373
            GL P  
Sbjct: 266 AGLAPDN 272



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 92/213 (43%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
            +N  V+   +  Y +  K+ E     + +++ GL       N L+ G  K   ++ +  
Sbjct: 24  GSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWE 83

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             ++++   +  +    N MI  LC+    +     L+   +KG  P+ +TY+ LI  Y 
Sbjct: 84  IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 143

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           ++G ++E  +L   M  K + P +  Y ++I+ LC+ GK   A      M    + P   
Sbjct: 144 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 203

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  L+       N   A  + +EM S+G+ P 
Sbjct: 204 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 236



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 2/197 (1%)

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++E    L+    N G  P    F+LL+    +A+++ E       + S+ L  S +A N
Sbjct: 9   RVEIVESLVLTYGNCGSNPL--VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  L + G    A  +    +  G   N  T + +I    K  +I+       +ME K
Sbjct: 67  SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P +  Y +LI++ C+ G LEEA +    M    L P V  Y +++    + G   +A
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186

Query: 358 LHLCEEMVSEGLKPSTS 374
             + +EM+  G+ P T+
Sbjct: 187 KGVLDEMLKIGMSPDTA 203


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 185/370 (50%), Gaps = 8/370 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++ + +   G + +L+++NTLI  + K+ + +  + + + ++ +   P+  T   ++ 
Sbjct: 134 AFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVD 193

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L   + M++ +  + C+P VI  T+L+  + +  R++E   + K M+ K+   
Sbjct: 194 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 253

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF--VYTTFIGAYCEYGKIEEANC 184
           D +AY  +V    K    + A  V +     G     +  VY   +  YC+ G+++E   
Sbjct: 254 DALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPN 308

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + ++M   G  P  +T+N++++G  K  +++E+  + E M S   +P   ++N +I  L 
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +    K+A  +L   +  G  P+ +TY+ L+  + KE    + + +   M    + P   
Sbjct: 369 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 428

Query: 305 AYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            Y +LIS L Q  +L +A +   +++++  +V     Y +++    ++G   +AL L + 
Sbjct: 429 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 488

Query: 364 MVSEGLKPST 373
           M   G++ +T
Sbjct: 489 MTGHGVEANT 498



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/391 (20%), Positives = 173/391 (44%), Gaps = 32/391 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +R  +  + ++N LI  + K+ + D    +   M++    P+  T  +++  LCK G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +    +L  +  + C P      +LI  + +++ ++    L+   +    + D + YS+
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +     K   ++ A  + +EM   G + N   Y T I   C+  K E+A  L++ + ++G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ-- 251
             P   T+ ++++G  K  R++++L   E M+ R   PS   +  ++  LC  G   +  
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 252 ------------ANGMLTLALDKGF------------------SPNEITYSHLIGGYAKE 281
                       A+ +  ++L  G+                  +P    Y+ L+ GY KE
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E+  ++ +M  +   P +  Y  ++  LC+ GK++EA  + + M S   VP V  Y
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++    +     +A  + ++M+  G+ P 
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPD 391



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/397 (22%), Positives = 172/397 (43%), Gaps = 32/397 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  +   + +R    S  ++NTLI  + K    D    +    + +   P+  T   
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L   LCK G++    +++  + G  C+P ++   +LI  + +  + E+   LL+ ++   
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + D + Y++IV    K   L+ AL + E MLKRG + +   YT  +   C  G+++EA+
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 184 CLMQEMENA------------------------------GLK--PYDETFNLLIEGCAKA 211
            + +EM +                               G++  PY + +N L++G  K 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            R++E  +  E M  R  +P+   +N ++  LC+ G   +A   L      G  P+ ++Y
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I G  K  + +E  ++  +M    I P    Y +L++  C+  + ++A    K M  
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             + P    Y +L+    +      A  L  EM+  G
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 156/328 (47%), Gaps = 7/328 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     +   G    ++S+N +I  + K+ +     ++   M++    P+  T  TL++
Sbjct: 341 AFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMA 400

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-MI 125
             CK  +    V +L  +      P  +   +LI  + Q  R+ +   L+  MLR   ++
Sbjct: 401 QFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVV 460

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
                Y+ I+    K   L+ AL++ + M   G  AN+  Y  FI   C+ G+++EA+ L
Sbjct: 461 SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 520

Query: 186 MQEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRK-LLPSCSAFNEMIRRL 243
           + EM+       DE ++  +I G  KA++++ +     +M++ K L  +   FN +I   
Sbjct: 521 LSEMDTL----RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 576

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +     +A  +L L + +G SP+ ITY+ +I    K  ++ +  +L+ EM  + I  + 
Sbjct: 577 TKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASS 636

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKS 331
            +YT LI  LC  G+ +EA +  + M S
Sbjct: 637 VSYTVLIYGLCGQGRGKEALQVLEEMAS 664



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 157/375 (41%), Gaps = 34/375 (9%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N L+    K  R D +  +++ M      PN  T   ++  LCK G++      L+ +H
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
              C P V+    +I  + +  + +E   +L +M++  +  D + Y+ ++    K    +
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLL 204
            A+ + + M+K G   ++  Y T I    +  ++ +A  LM EM  N  +     T+N +
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT------- 257
           I+   K   ++++L   + M    +  +   +N  I RLC+ G   +A+ +L+       
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 529

Query: 258 --------------------------LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
                                     +   KG      T++ LI  + K   + E L L 
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
             M  +  SP++  Y  +I+ LC+  K+++A + F  M    +V     Y  L+     +
Sbjct: 590 ELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 649

Query: 352 GNKAKALHLCEEMVS 366
           G   +AL + EEM S
Sbjct: 650 GRGKEALQVLEEMAS 664



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 20/189 (10%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++   G   + +++N  I  + K  R D    +   M + +R  +E +  T+I  LCK  
Sbjct: 488 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM-DTLR--DEVSYTTVIIGLCKAE 544

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVN----TS-----LILRIIQEERIEEGMVLLKRMLRKN 123
           QL       DR   K    MV V     TS     LI    + +R++E + LL+ M+++ 
Sbjct: 545 QL-------DR-ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG 596

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                I Y++++    K+  ++ A  +++EM  RG  A+S  YT  I   C  G+ +EA 
Sbjct: 597 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 656

Query: 184 CLMQEMENA 192
            +++EM ++
Sbjct: 657 QVLEEMASS 665



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG S S+I++N +I  + K D+ D  W ++  M       +  +   LI  LC  G+ +
Sbjct: 594 QRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGK 653

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             + +L+ +    C    +    L L +  + R EE   LL+RM  K
Sbjct: 654 EALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 171/368 (46%), Gaps = 16/368 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + GF  +L++FNTL+H +   DR      ++  M +    PN  T  TL++ LC+ G+
Sbjct: 41  LTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGR 96

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYS 132
           +   V +LDR+      P  I   +++  + +       + LL++M   + I  D + YS
Sbjct: 97  VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYS 156

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I+    K      A  ++ EM  +G   +   Y+  I  +C  GK  EA  L+QEM   
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P   TF+ LI    K   +  +    ++M+S  + P+    N ++  LC+ G  K A
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276

Query: 253 NGML------TLALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             M        + +D      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y+S+I+ LC+  +L+EA + F  M S S  P +  + +L+  + + G     L L 
Sbjct: 337 DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELF 396

Query: 362 EEMVSEGL 369
            EM   G+
Sbjct: 397 CEMGRRGI 404



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 133/294 (45%), Gaps = 13/294 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G    +++++ +I+    S +     R+ Q ML     P+  T   LI+AL K G 
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH------- 126
           L +  D+L  +      P V+   +L+  +    ++++ + + K M +K+M+        
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDIDATHAF 296

Query: 127 -----DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                D   Y++++   +       A  +YEEM  RG   ++  Y++ I   C+  +++E
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   M +    P   TFN LI G  KA  +++ L    +M  R ++ +   +  +IR
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
              + GN   +  +    +  G  P+ IT  +++ G   + E++  L +  E++
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 40/245 (16%)

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + +   I  +C   K+  A     ++   G  P   TFN L+ G     R+ E+L    Q
Sbjct: 16  YSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT------------- 270
           M      P+   F  ++  LC  G   +A  +L   ++ G  PN+IT             
Sbjct: 76  MCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131

Query: 271 -----------------------YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
                                  YS +I G  K+G   +   L+ EM+ K I P +  Y+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            +I+  C  GK  EA +  + M    + P V  +  L+   +++G+   A  L +EM+S 
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 368 GLKPS 372
           G+ P+
Sbjct: 252 GVCPN 256


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 167/356 (46%), Gaps = 8/356 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+ISFN L+  + K      V+ +Y+ M      PN  T+  LI+ LC   +++  +  +
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             I  +   P V+  TSLI  +  E RI E   L  RM +     + + Y  ++    + 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 142 RNLESALVVYEEMLKRGFSA-------NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
            N+  AL +++EML  G S        N F Y   I   C+ GK +EA  L  EM + G+
Sbjct: 210 GNINLALKLHQEML-NGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 268

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   TF+ LI+   K   + E+  + E MM R ++P    F  +I   C  G+   A  
Sbjct: 269 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 328

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +      KG+ P+ I+Y+ LI GY K   ++E +KLY EM      P +  +  L+  L 
Sbjct: 329 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 388

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             GK+ +A K F ++K H++   + I    +    + G   +A+ L  E+ S  +K
Sbjct: 389 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMK 444



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 38/350 (10%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++ S+N +I  + K  +     R++  M++    P+  T   LI  LCK G +      L
Sbjct: 236 NIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFL 295

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  +   P +   TSLI        ++    L   M  K    D I+Y++++Y   K 
Sbjct: 296 ETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT 355

Query: 142 RNLESALVVYEEMLKRG-----------------------------------FSANSFVY 166
            N+E A+ +Y EML+ G                                      N ++ 
Sbjct: 356 FNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYIC 415

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           + F+   C+ G + EA  L  E+++  +K   E+FN LI+G  KA+++E +    E++  
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
             L P    +  MI   C+ G    AN +  +  + G +PN +TYS L+ G+ K  +++E
Sbjct: 476 EGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEE 535

Query: 287 VLKLYYEMEYKSISPTLPAYT---SLISSLCQCGKLEEADKYFKIMKSHS 333
           V+KL ++M  K +S     YT    ++S   +C +  +  + F + K  S
Sbjct: 536 VVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFPVQKHPS 585



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 157/363 (43%), Gaps = 6/363 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           +RG+   ++++ +LI  +    R     R++  M +   +PN  T  TLI  LC+ G   
Sbjct: 154 RRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNIN 213

Query: 74  --LQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             L+ + +ML+    +   C P +     +I  + +  + +E   L   M+ + +  D +
Sbjct: 214 LALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVV 273

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            +S ++    K   +  A    E M+ RG   + F +T+ I  +C  G ++ A  L   M
Sbjct: 274 TFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSM 333

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            + G +P   ++ +LI G  K   +EE++    +M+     P    F  +++ L   G  
Sbjct: 334 PSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKV 393

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +  +        N    S  + G  K G + E ++L+ E++  ++   + ++  L
Sbjct: 394 GDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCL 453

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+  KLE A + F+ +    L P V  Y  ++    + G    A  L + M   G 
Sbjct: 454 IDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGC 513

Query: 370 KPS 372
            P+
Sbjct: 514 TPN 516



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 156/369 (42%), Gaps = 41/369 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR------YPNEATIRTLISA 67
           +++ G   +++++ TLI  + ++   +L  +++Q ML           PN  +   +I  
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK G+ +    + + +  +   P V+  ++LI  + +E  + E    L+ M+ + ++ D
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
              ++ ++     + +L+SA  ++  M  +G+  +   YT  I  YC+   +EEA  L  
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIE-------------------------------- 215
           EM   G  P  +TF +L++G   A ++                                 
Sbjct: 367 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNG 426

Query: 216 ---ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
              E++    ++ S  +     +FN +I  LC+    + A  +      +G  P+ +TY 
Sbjct: 427 CLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYC 486

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            +I G+ K G++     L+  ME    +P L  Y++L+    +  KLEE  K    M   
Sbjct: 487 IMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546

Query: 333 SLVPGVDIY 341
            +     IY
Sbjct: 547 DVSLAASIY 555



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 116/258 (44%), Gaps = 10/258 (3%)

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           M+   I+++L++ A  K+++      +Y++M   G S N F     I   C   ++ E  
Sbjct: 87  MMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGL 146

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             M  +   G  P   T+  LI+G     RI E+     +M      P+   +  +I+ L
Sbjct: 147 SAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGL 206

Query: 244 CECGNAKQA--------NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           C  GN   A        NG    A++    PN  +Y+ +I    K G+ +E  +L+ EM 
Sbjct: 207 CRTGNINLALKLHQEMLNGTSPYAIN--CKPNIFSYNIIIDELCKIGKWKEAKRLFNEMV 264

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + + P +  +++LI +LC+ G + EA K+ + M    +VP +  + SL+      G+  
Sbjct: 265 DQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLD 324

Query: 356 KALHLCEEMVSEGLKPST 373
            A  L   M S+G +P  
Sbjct: 325 SAKELFLSMPSKGYEPDV 342



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 67/132 (50%), Gaps = 1/132 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LFE A ++   L+     L + SFN LI  + K+ + +  W +++ + +    P+  T  
Sbjct: 428 LFE-AMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYC 486

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +I+  CK GQ+     +   +    C+P ++  ++L+    +  ++EE + LL +M++K
Sbjct: 487 IMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546

Query: 123 NMIHDTIAYSLI 134
           ++      Y+++
Sbjct: 547 DVSLAASIYTIV 558



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 56/118 (47%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A+++   L Q G    ++++  +I+   K+ + D    ++Q M EN   PN  T 
Sbjct: 461 RKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTY 520

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
             L+    K  +L+  V +L ++  K  S    + T +   + ++E+  E + +L+R 
Sbjct: 521 SALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRF 578


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 174/371 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE    +   +  RG ++++  FN +I    K           + M E    P+  T  T
Sbjct: 287 FEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNT 346

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+  CKGG+++   + L++   +   P     T L+    ++    +   +L R+    
Sbjct: 347 MINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIG 406

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D ++Y   ++  V    ++ AL+V E+M+++G   ++ +Y   +   C+ G+     
Sbjct: 407 EKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMK 466

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM +  ++P    F  L++G  +   ++E++   + ++ + + P    +N MI+  
Sbjct: 467 LLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGF 526

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G    A   L    +   +P+E TYS +I GY K+ ++   LK++ +M      P +
Sbjct: 527 CKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNV 586

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YTSLI+  C+   +  A+K F+ MKS  LVP V  Y +LVG   + G   KA  + E 
Sbjct: 587 ITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFEL 646

Query: 364 MVSEGLKPSTS 374
           M+  G  P+ +
Sbjct: 647 MLMNGCPPNDA 657



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 162/355 (45%), Gaps = 4/355 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPNEATIRTLISALCKGGQLQTY 77
           ++++ N+L++ + KS + D+  ++Y  ML+         +  T   ++  LC  G+++  
Sbjct: 161 TVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEG 220

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++    GK C P V+    +I    ++  ++     LK +  K ++     Y  ++  
Sbjct: 221 RRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALING 280

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K    E+   +  EM  RG + N  V+   I A  +YG + +A   M+ M   G  P 
Sbjct: 281 FCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPD 340

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N +I    K  RI+E+  + E+   R LLP+  ++  ++   C+ G+  +A GML 
Sbjct: 341 ITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLF 400

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + G  P+ ++Y   I G    GEI   L +  +M  K + P    Y  L+S LC+ G
Sbjct: 401 RIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNG 460

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +          M   ++ P V ++ +L+   +  G   +A+ + + ++ +G+ P 
Sbjct: 461 RFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPG 515



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 144/317 (45%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T   LI+  CK G+ +    +L  +  +  +  V V  ++I    +   + +    
Sbjct: 269 PTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAET 328

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           ++RM       D   Y+ ++    K   ++ A    E+  +RG   N F YT  + AYC+
Sbjct: 329 MRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCK 388

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G   +A  ++  +   G KP   ++   I G      I+ +L   E+MM + + P    
Sbjct: 389 QGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQI 448

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC+ G       +L+  LD+   P+   ++ L+ G+ + GE+ E +K++  + 
Sbjct: 449 YNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVII 508

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K + P +  Y ++I   C+ GK+ +A      MK+    P    Y +++  ++++ + +
Sbjct: 509 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMS 568

Query: 356 KALHLCEEMVSEGLKPS 372
            AL +  +M+    KP+
Sbjct: 569 SALKMFGQMMKHKFKPN 585



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 152/339 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  R + + G    + ++NT+I+   K  R        +   E    PN+ +   L+ 
Sbjct: 325 AAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMH 384

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G       ML RI      P ++   + I  ++    I+  +++ ++M+ K +  
Sbjct: 385 AYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFP 444

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    K     +  ++  EML R    + +V+ T +  +   G+++EA  + 
Sbjct: 445 DAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIF 504

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + +   G+ P    +N +I+G  K  ++ ++LS   +M +    P    ++ +I    + 
Sbjct: 505 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQ 564

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +   A  M    +   F PN ITY+ LI G+ K+ ++    K++  M+   + P +  Y
Sbjct: 565 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTY 624

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           T+L+    + GK E+A   F++M  +   P    +  L+
Sbjct: 625 TTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLI 663



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 16/316 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            L+S+   IH V      D+   + + M+E   +P+      L+S LCK G+      +L
Sbjct: 410 DLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLL 469

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +   P V V  +L+   I+   ++E + + K ++RK +    + Y+ ++    K 
Sbjct: 470 SEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKF 529

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  AL    +M     + + + Y+T I  Y +   +  A  +  +M     KP   T+
Sbjct: 530 GKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITY 589

Query: 202 NLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
             LI G C KA  I     +   M S  L+P+   +  ++    + G  ++A  +  L L
Sbjct: 590 TSLINGFCKKADMIRAEKVF-RGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELML 648

Query: 261 DKGFSPNEITYSHLIGGYAK--------------EGEIQEVLKLYYEMEYKSISPTLPAY 306
             G  PN+ T+ +LI G                 E E   +L  +  M  +     + AY
Sbjct: 649 MNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAY 708

Query: 307 TSLISSLCQCGKLEEA 322
            S+I  LC+ G ++ A
Sbjct: 709 NSVIVCLCKHGMVDTA 724



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/324 (20%), Positives = 137/324 (42%), Gaps = 40/324 (12%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           CS   + ++SL+  +       E  ++L+ M  +++     A+S ++ A  +  +L+ AL
Sbjct: 87  CSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRAL 146

Query: 149 VVYEEMLKRGFSANSFVYT-TFIGAYCEYGKIEEA----NCLMQEMENAGLKPYDETFNL 203
            ++  + +      + V + + +    + GK++ A    + ++Q  +  G    + T ++
Sbjct: 147 QLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 206

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +++G     +IEE     +    +  +P    +N +I   C+ G+ + A   L     KG
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKG 266

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS----------------------- 300
             P   TY  LI G+ K GE + V +L  EM  + ++                       
Sbjct: 267 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAA 326

Query: 301 ------------PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
                       P +  Y ++I+  C+ G+++EAD++ +  K   L+P    Y  L+  +
Sbjct: 327 ETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAY 386

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G+  KA  +   +   G KP 
Sbjct: 387 CKQGDYVKAAGMLFRIAEIGEKPD 410



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 21/172 (12%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R ++      +++++ TL+    K+ + +    I++ ML N   PN+AT   LI+ L 
Sbjct: 608 VFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLT 667

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
                   ++  D +  +R         SLIL                 ML +       
Sbjct: 668 NTATSPVLIEEKDSMENER---------SLILD------------FFTMMLSEGWDQVIA 706

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           AY+ ++    K   +++A ++  +ML +GF  +S  +T  +   C  GK +E
Sbjct: 707 AYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKE 758


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 1/380 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ A +V R +E +G +  +IS++  I       + +    +   M      PN     +
Sbjct: 301 WKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNS 360

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I A  KGGQ +  V++L  +     +P      S I    +  R +E + LLK M  K 
Sbjct: 361 AIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKR 420

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D I+Y+  + A  K    E AL +  +M  +G + N       I A  E G+ +E  
Sbjct: 421 LKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGL 480

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+++M   GL P   T+N  I+ C K  + E++L    +M    + P    +N  I   
Sbjct: 481 ELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAAC 540

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  K+A  +L     +G +P+ I+Y+  I  Y K G+ +  ++L  +M  K ++P +
Sbjct: 541 SKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNV 600

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I +  + G+ E+A    K +K  ++ P +  Y   +    ++G   +AL L  E
Sbjct: 601 ITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLRE 660

Query: 364 MVSEGLKPST-SYLCSASTC 382
           M +EGL P   SY  +   C
Sbjct: 661 MPAEGLTPDVISYTSAIRAC 680



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 174/380 (45%), Gaps = 1/380 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ A  V   +  +G +   IS+N  I    +S R      + + M      P+  +   
Sbjct: 266 WKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDA 325

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I A   GGQ +T VD+LD + G+  +P  I   S I+   +  + E+ + LL+ +    
Sbjct: 326 AIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALG 385

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D  +++  + A  K    + AL + +EM  +    ++  Y + I A  + G+ E A 
Sbjct: 386 LTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMAL 445

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L ++M   GL P   + N+ I  C +  R +E L    QM ++ L P+   +N  I+  
Sbjct: 446 ELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTC 505

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A  +L    +   +P+ ITY+  I   +K G  +E + L  EM  + ++P +
Sbjct: 506 GKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDV 565

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT+ I +  + G+ E A +  + M +  L P V  Y S++      G   KAL L +E
Sbjct: 566 ISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKE 625

Query: 364 MVSEGLKPS-TSYLCSASTC 382
           +    + P   SY  + S C
Sbjct: 626 LKETAVAPDLMSYNLAISAC 645



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 170/366 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A ++ R +   G +    SFN+ I   TKS R      + + M      P+  +  +
Sbjct: 371 WEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNS 430

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I A  KGGQ +  +++  ++  K  +P VI +   I    +  R +EG+ LL++M  + 
Sbjct: 431 AIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQG 490

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I Y+  +    K    E AL +  +M +   + +S  Y + I A  + G+ +EA 
Sbjct: 491 LTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAV 550

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM   GL P   ++   I+   K  + E ++    QM ++ L P+   +N +I+  
Sbjct: 551 ALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKAC 610

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G  ++A  +L    +   +P+ ++Y+  I    K G  +E L L  EM  + ++P +
Sbjct: 611 GRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDV 670

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YTS I +    G+ E+A     +M +H + P    Y   +    + G + +A+ L  E
Sbjct: 671 ISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVRE 730

Query: 364 MVSEGL 369
           M   GL
Sbjct: 731 MAQRGL 736



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 184/407 (45%), Gaps = 42/407 (10%)

Query: 4   FEVAFDVCRYL-EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +E A ++ R + EQ G S ++  +N+ I      D+ ++   + + M +    P+E +  
Sbjct: 160 WEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYN 219

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           + I A  +GGQ +  + +L  +     +P  I   S+I    +E + +E + +L  M  K
Sbjct: 220 SAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAK 279

Query: 123 NMIHDTIAYSLIVYAKVK----------MRNLESALV----------------------- 149
            +  +TI+Y++ + A  +          +R +ES  V                       
Sbjct: 280 GLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETS 339

Query: 150 --VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             + +EM  RG + N+  + + I A  + G+ E+A  L++E+   GL P   +FN  I  
Sbjct: 340 VDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAA 399

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGF 264
           C K+ R +E+L   ++M +++L P   ++N  I     CG   Q    L L      KG 
Sbjct: 400 CTKSGRWKEALELLKEMPAKRLKPDAISYNSAIE---ACGKGGQWEMALELRRQMPTKGL 456

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN I+ +  I    + G  QE L+L  +M  + ++P +  Y S I +  + G+ E+A  
Sbjct: 457 TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALD 516

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
               MK  ++ P    Y S +    ++G   +A+ L  EM  +GL P
Sbjct: 517 LLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTP 563



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 136/297 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E+A ++ R +  +G + ++IS N  I    +  R      + + M      PN  T  +
Sbjct: 441 WEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNS 500

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I    KGGQ +  +D+L ++     +P  I   S I    +  R +E + LL+ M  + 
Sbjct: 501 AIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQG 560

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D I+Y+  + A  K    E A+ +  +M  +G + N   Y + I A    G+ E+A 
Sbjct: 561 LTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKAL 620

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++E++   + P   ++NL I  C K  R EE+L    +M +  L P   ++   IR  
Sbjct: 621 DLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRAC 680

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              G  ++A G+L L    G SP   +YS  I    K G  +E + L  EM  + +S
Sbjct: 681 NAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLS 737



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 2/234 (0%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLI 205
           AL + +EM K G    +  YTT I      G+ E+A  L++E+ E  G+ P    +N  I
Sbjct: 129 ALGILDEM-KEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAI 187

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           E C    + E ++S   +M  R+++P   ++N  I+     G  ++  G+L      G +
Sbjct: 188 EACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLT 247

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ ITY+ +I G  KEG+ +E L +  EM  K ++P   +Y   I +  + G+ +EA + 
Sbjct: 248 PDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEV 307

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
            + M+S  + P V  Y++ +      G    ++ L +EM   G+ P+T +  SA
Sbjct: 308 LRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSA 361



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 126/272 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++   ++ R +  +G + ++I++N+ I    K  + +    +   M E    P+  T  +
Sbjct: 476 WQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNS 535

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I+A  K G+ +  V +L  + G+  +P VI  T+ I    +  + E  + LL++M  K 
Sbjct: 536 AIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKG 595

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I Y+ ++ A  +    E AL + +E+ +   + +   Y   I A  + G+ EEA 
Sbjct: 596 LTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEAL 655

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM   GL P   ++   I  C      E++L     M +  + P+ ++++  I   
Sbjct: 656 DLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEAC 715

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            + G  ++A  ++     +G S   I+ S ++
Sbjct: 716 GKGGRREEAVCLVREMAQRGLSHRNISNSLIV 747



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 94/203 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ A  + R +  +G +  +IS+   I    K+ + +    + + M      PN  T  +
Sbjct: 546 WKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNS 605

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I A  +GG+ +  +D+L  +     +P ++     I    +  R EE + LL+ M  + 
Sbjct: 606 VIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEG 665

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D I+Y+  + A       E AL +   M   G S  +  Y+  I A  + G+ EEA 
Sbjct: 666 LTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAV 725

Query: 184 CLMQEMENAGLKPYDETFNLLIE 206
           CL++EM   GL   + + +L++E
Sbjct: 726 CLVREMAQRGLSHRNISNSLIVE 748


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 171/368 (46%), Gaps = 16/368 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + GF  +L++FNTL+H +   DR      ++  M +    PN  T  TL++ LC+ G+
Sbjct: 41  LTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGR 96

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYS 132
           +   V +LDR+      P  I   +++  + +       + LL++M   + I  D + YS
Sbjct: 97  VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYS 156

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I+    K      A  ++ EM  +G   +   Y+  I  +C  GK  EA  L+QEM   
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P   TF+ LI    K   +  +    ++M+S  + P+    N ++  LC+ G  K A
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276

Query: 253 NGML------TLALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             M        + +D      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y+S+I+ LC+  +L+EA + F  M S S  P +  + +L+  + + G     L L 
Sbjct: 337 DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELF 396

Query: 362 EEMVSEGL 369
            EM   G+
Sbjct: 397 CEMGRRGI 404



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 134/294 (45%), Gaps = 13/294 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G    +++++ +I+    S +     R+ Q ML     P+  T   LI+AL K G 
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH------- 126
           L +  D+L  +      P V+   +L+  +    ++++ + + K M +K+M+        
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM-QKSMMDIDATHAF 296

Query: 127 -----DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                D   Y++++   +       A  +YEEM  RG   ++  Y++ I   C+  +++E
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   M +    P   TFN LI G  KA  +++ L    +M  R ++ +   +  +IR
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
              + GN   +  +    +  G  P+ IT  +++ G   + E+++ L +  E++
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 40/245 (16%)

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + +   I  +C   K+  A     ++   G  P   TFN L+ G     R+ E+L    Q
Sbjct: 16  YSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT------------- 270
           M      P+   F  ++  LC  G   +A  +L   ++ G  PN+IT             
Sbjct: 76  MCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131

Query: 271 -----------------------YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
                                  YS +I G  K+G   +   L+ EM+ K I P +  Y+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            +I+  C  GK  EA +  + M    + P V  +  L+   +++G+   A  L +EM+S 
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS 251

Query: 368 GLKPS 372
           G+ P+
Sbjct: 252 GVCPN 256


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 171/360 (47%), Gaps = 6/360 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +  +   L++   K+ R++   R+ +  LE + +PNE    T+I+  CK GQ+   
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++LD +  +     V+++++LI  + ++ RI+E +   K M  +    + I Y+ +V  
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNG 189

Query: 138 KVKMRNLESALVVYEEMLKR-----GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
             K   ++ AL ++++M KR     G   +   Y+T I A C+  ++++A    + M   
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P   T++ LI+G  K  R  E L     M  +    +   FN M+  L +    ++A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
                  L  G  PN +TY+  + G  K G + E  ++  EM    ++P +  Y+S+I  
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C+ G++++AD  F  M  H  +P    + +L+    E     +A  + E+MV+ G  P 
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 429



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 181/359 (50%), Gaps = 9/359 (2%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-------PNEATIRTLISALCKGG 72
           S ++I++NT+++ + K++R D    ++  M +  RY       P+  +  T+I ALCK  
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEK--RYEASHGCEPDVISYSTVIDALCKAQ 234

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++    +   R+    C+P V+  +SLI  + + +R  E + LL  M  K    + I ++
Sbjct: 235 RVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFN 294

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            +++A  K    E A   +E +LK G   N   Y   +   C+ G+++EA  ++ EM  +
Sbjct: 295 AMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVES 354

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P   T++ +I+G  KA R++++     +MM  + +P    F  ++    E   +++A
Sbjct: 355 KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA 414

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +    ++ GF P   TY+ L+        ++  L++Y++M+ K   P    Y  LI  
Sbjct: 415 FRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQC 474

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           LC+  +++EA ++  +M++ ++VP   I  +LV +  ++G   +A  + + +V  G +P
Sbjct: 475 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQP 533



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/402 (21%), Positives = 178/402 (44%), Gaps = 32/402 (7%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           +++++GF +++I FN ++H + K+D  +   + ++ +L++ + PN  T    +  LCK G
Sbjct: 280 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 339

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++     +L  +   + +P VI  +S+I    +  R+++   +  RM+    I   + + 
Sbjct: 340 RVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            +++   + +    A  V+E+M+  GF      Y   +   C    +E A  +  +M+  
Sbjct: 400 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 459

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   T+  LI+   +A+R++E+  + + M +  ++P+ +  + ++  LC+ G   +A
Sbjct: 460 KRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 519

Query: 253 NGMLT--------------------------------LALDKGFSPNEITYSHLIGGYAK 280
             +L                                 L    GF  +  TYS  +    K
Sbjct: 520 CSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICK 579

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G+  E +++  +M  K + P    Y +++ SLC   ++E A   F+ M S    PG+  
Sbjct: 580 AGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVT 639

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
           Y  L+G         +A  + E MV+ G  P    + + S+C
Sbjct: 640 YTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSC 681



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/377 (19%), Positives = 144/377 (38%), Gaps = 70/377 (18%)

Query: 11  CRYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           C++ E   + G   +++++N  +H + K+ R D  +RI   M+E+   P+  T  ++I  
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK G++    D+  R+    C P  +   +L+    + ++  E   + + M+    I  
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 429

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI----------------- 170
              Y++++       ++ESAL +Y +M ++    +   Y   I                 
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLD 489

Query: 171 ----------GA--------YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG----- 207
                     GA         C+ G+++EA  ++  +   G +P  ETF +L+E      
Sbjct: 490 VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRK 549

Query: 208 ---------------------------CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
                                        KA + +E++   EQM+ + + P    +  ++
Sbjct: 550 KWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           R LC     + A         +G +P  +TY+ LIG         E  +++  M     +
Sbjct: 610 RSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFT 669

Query: 301 PTLPAYTSLISSLCQCG 317
           P      +L S L   G
Sbjct: 670 PQAQTMRTLSSCLRDAG 686



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 6/195 (3%)

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           K GF  N++     + A+ +  + EEA+ L++E       P +  +  +I G  KA +++
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           ++    ++M  R +       + +I+ LC  G   +A      ++ +  SPN ITY+ ++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFK-SMGEECSPNVITYNTVV 187

Query: 276 GGYAKEGEIQEVLKLYYEMEYK-----SISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            G  K   I E L+L+ +ME +        P + +Y+++I +LC+  ++++A +YFK M+
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247

Query: 331 SHSLVPGVDIYESLV 345
           +    P V  Y SL+
Sbjct: 248 AVGCAPNVVTYSSLI 262


>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 169/364 (46%), Gaps = 1/364 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ + A  V  ++   GF   L +   L++ + K+   ++VW++Y+ M+     PN    
Sbjct: 166 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 225

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI A CK G ++    +L+ +  +   P +    +LI    ++    E + +  RM R
Sbjct: 226 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 285

Query: 122 KNMIHDTIAYSLIVYAKVK-MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             +  D + Y+ ++Y   + + +LE AL + E M   G       Y + +   CE GKI+
Sbjct: 286 GGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIK 345

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +AN L+ EM    ++P + T N LI    K   +  ++   ++M+   L P    F  +I
Sbjct: 346 DANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 405

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+      A   L   LD GFSP+  TYS L+  Y  +   + V++L  E+  K + 
Sbjct: 406 HGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLF 465

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
             +  Y +LI  LC+  K+E A++ F +M+   +     +Y SL   + + G    A  +
Sbjct: 466 VDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDM 525

Query: 361 CEEM 364
            +EM
Sbjct: 526 LDEM 529



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/354 (22%), Positives = 147/354 (41%), Gaps = 36/354 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL  + + V + + + G   ++  FN LIH   KS   +   ++   M     +P+  T 
Sbjct: 201 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 260

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL-------------------- 101
            TLIS  CK G     + + DR+     SP ++   SLI                     
Sbjct: 261 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVME 320

Query: 102 ----------------RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                           ++ +E +I++   LL  M  + +  D +  + ++ A  K+ ++ 
Sbjct: 321 VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMG 380

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           SA+ V ++ML+ G   + F +   I  +C+  +++ A   + EM +AG  P   T++ L+
Sbjct: 381 SAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 440

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +        E  +   +++  + L    S +  +IRRLC+    + A  + TL   KG  
Sbjct: 441 DSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMK 500

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
            + + Y+ L   Y K G+      +  EM+ + +  TL  Y    +S    G +
Sbjct: 501 GDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 554



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 1/215 (0%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
            +NS + +  +  Y      ++A  + + M   G KP+     +L+   AKA+       
Sbjct: 149 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 208

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             ++M+   ++P+   FN +I   C+ G+ ++A  +L     +   P+  TY+ LI  Y 
Sbjct: 209 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 268

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC-QCGKLEEADKYFKIMKSHSLVPGV 338
           K+G   E L +   ME   +SP +  Y SLI   C +   LEEA +  ++M+   L PGV
Sbjct: 269 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGV 328

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             Y S++    E+G    A  L  EM    ++P  
Sbjct: 329 VTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDN 363


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 177/381 (46%), Gaps = 3/381 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+    ++++G   ++ + N+L+ +  K +R +  W +Y  M       +  T   +I+
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L+   D +  +      P ++   +++       R+E    +L  M R+ +  
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D+  Y  ++    K   LE A  ++EEM+++G   ++ +Y T I  +C  G ++ A+   
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+ P   T+N LI      +R +E+    +++  + + P    +N +I   C C
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            NAK+A  +    L  G  P + TY+ L+   +K+  ++E   L+ ++  + + P    +
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMF 469

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LI   C    ++ A +  K M    + P    + +++  H  +G   +A  L +EM  
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529

Query: 367 EGLKP---STSYLCSASTCRG 384
            G+KP   S + L S  + RG
Sbjct: 530 RGIKPDHISFNTLISGYSRRG 550



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 169/354 (47%), Gaps = 6/354 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+ +FN +I+V+ K  +         HM  +   PN  T  T++   C  G+++    +L
Sbjct: 220 SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++  P      SLI  + ++ R+EE   + + M++K +    + Y+ ++      
Sbjct: 280 TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            NL+ A    +EMLK+G S     Y + I A     + +EA C+++E++  G+ P   T+
Sbjct: 340 GNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399

Query: 202 NLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           N+LI G   CA AK+   +    ++M++  + P+   +  ++  L +    K+A+ +   
Sbjct: 400 NILINGYCRCANAKK---AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              +G  P+ I ++ LI G+     ++   +L  +M+   + P    + +++   C+ GK
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +EEA + F  MK   + P    + +L+  +  +G+   A  +  EM+  G  P+
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 163/341 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   ++++       ++ +LI  + K  R +   +I++ M++    P+     TL
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C  G L       D +  K  SP +    SLI  +  E+R +E   ++K +  K +
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I Y++++    +  N + A ++++EML  G       YT+ +    +  +++EA+ 
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++ + G+ P    FN LI+G      ++ +    + M   K+ P    FN +++  C
Sbjct: 453 LFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  ++A  +      +G  P+ I+++ LI GY++ G+I++  ++  EM     +PT+ 
Sbjct: 513 REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            Y +L+  LC+  + + A++  K M S  + P    Y +L+
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 128/265 (48%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G S ++ ++N+LIH +    R D    + + + E    P+  T   LI+  C+    +
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAK 413

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + D +      P     TSL+  + ++ R++E   L K++  + ++ D I ++ ++
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                  N++ A  + ++M +     +   + T +  +C  GK+EEA  L  EM+  G+K
Sbjct: 474 DGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIK 533

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   +FN LI G ++   I+++     +M+     P+   +N +++ LC+      A  +
Sbjct: 534 PDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEEL 593

Query: 256 LTLALDKGFSPNEITYSHLIGGYAK 280
           L   + KG +P++ TY  LI G AK
Sbjct: 594 LKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 1/217 (0%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           GF + S V+   I + C+  + +EA      M+  G+ P  ET N L+    K  R E +
Sbjct: 147 GFKS-SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
                +M   ++  S   FN MI  LC+ G  K+A   +      G  PN +TY+ ++ G
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           Y   G ++    +   M+ + I P    Y SLIS +C+ G+LEEA K F+ M    L P 
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             IY +L+     KGN   A    +EM+ +G+ P+ S
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 108/245 (44%)

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           +I +  ++ +   M   + A   +  M ++G         + +  + +  + E A  L  
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM    +K    TFN++I    K  +++++  +   M +  + P+   +N ++   C  G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             + A+ +LT    +   P+  TY  LI G  K+G ++E  K++ EM  K + P+   Y 
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +LI   C  G L+ A  Y   M    + P +  Y SL+     +    +A  + +E+  +
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 368 GLKPS 372
           G+ P 
Sbjct: 391 GISPD 395



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 91/193 (47%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++ +L+HV++K +R      +++ +      P+      LI   C    ++   ++L  +
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +  P  +   +++    +E ++EE   L   M R+ +  D I+++ ++    +  ++
Sbjct: 493 DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDI 552

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  V  EML  GF+     Y   +   C+  + + A  L++EM + G+ P D T+  L
Sbjct: 553 KDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTL 612

Query: 205 IEGCAKAKRIEES 217
           IEG AK    +E+
Sbjct: 613 IEGIAKVNIPDEN 625



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 68/167 (40%)

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G      I E   +      R    S   F+ +I+  C+   A +A        +KG  P
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLP 184

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
              T + L+  + K    +    LY EM    I  ++  +  +I+ LC+ GKL++A  + 
Sbjct: 185 TIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFV 244

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             M++  + P +  Y ++V  +   G    A  +   M  + ++P +
Sbjct: 245 GHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 7/328 (2%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++  CKGG +     + D +     +P  +  T+L+       + E+G  L + M R 
Sbjct: 43  ALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRG 102

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +   Y+ ++    +    E A  +++EM  RG   N   Y T I   C +GK+ +A
Sbjct: 103 GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDA 162

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+  M   G +P   TFNLL++G  KA ++  +L +  QM +    PS   +N +I  
Sbjct: 163 AKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAG 222

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C   +  +AN  L+   ++G  P ++TY+ LI  +A+E  + +  ++   ME   +   
Sbjct: 223 FCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVD 282

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y  L+ +LC  G +++A K F+ M    + P   IY+ ++  +  +G+  KAL L  
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342

Query: 363 EMVSEGLKP-STSY------LCSASTCR 383
           EM  +GL P S SY      LC    C+
Sbjct: 343 EMRQKGLIPNSASYGLTIRVLCKDDKCQ 370



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 142/328 (43%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G + + +++  L+H      + +  + +++ M      PN  T   LI   C+ G+ +  
Sbjct: 68  GLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA 127

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             + D +  +     V+   +LI  + +  ++ +   LL  M  +      I ++L+V  
Sbjct: 128 RSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDG 187

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   + +AL  + +M   GF  ++  Y   I  +C    +  AN  + +M+  GL+P 
Sbjct: 188 YGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPT 247

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ +LI+  A+   + ++      M    L      +  ++R LC  GN K A  +  
Sbjct: 248 KVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQ 307

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG  P+ + Y  +I GY +EG   + LKL  EM  K + P   +Y   I  LC+  
Sbjct: 308 SMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLV 345
           K +EA+     M    L     I ++L+
Sbjct: 368 KCQEAEALLDDMVRAGLQTSESICQALL 395



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 1/280 (0%)

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVV 150
           M     + + R+     +   + +L R  +  +   D  A + +V    K  ++  A  V
Sbjct: 1   MWGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRV 60

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           ++EM   G + N   YT  +  Y  +G+ E+   L +EM   G++P   T+N LI    +
Sbjct: 61  FDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
               E + S  ++M  R ++ +  ++N +I  LC  G    A  +L +   +G  P+ IT
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           ++ L+ GY K G++   L  + +M+     P+   Y  LI+  C+   +  A++    MK
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              L P    Y  L+     + +  KA  +   M   GL+
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLE 280



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/277 (18%), Positives = 117/277 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  +   +  RG   +++S+NTLI  + +  +     ++   M      P+  T   
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNL 183

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+    K G++   +   +++      P  +    LI    +   +      L  M  + 
Sbjct: 184 LVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + Y++++ +  +  ++  A  +   M K G   ++  Y   + A C  G +++A 
Sbjct: 244 LEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDAR 303

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L Q M   G++P +  ++++I G  +     ++L    +M  + L+P+ +++   IR L
Sbjct: 304 KLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVL 363

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
           C+    ++A  +L   +  G   +E     L+   A+
Sbjct: 364 CKDDKCQEAEALLDDMVRAGLQTSESICQALLDAKAR 400


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 177/359 (49%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   GF     +FN+L++ + +         I   ML+    P+  T  +LI  LCK G+
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  V++L+++  +  SP  +   +LI  + +E ++EE   L + +  K ++ D   ++ 
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++       N   A+ ++EEM  +G   + F Y   I + C  G++EEA  L++EME++G
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
                 T+N LI+G  K KRIEE+    ++M  + +  +   +N +I  LC+    ++A 
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAA 546

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++   L +G  P++ TY+ L+  + + G+I++   +   M      P    Y +LI  L
Sbjct: 547 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL 606

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + G++E A +  + ++   +V     Y  ++     +   ++A+ L  EM+ +G  P 
Sbjct: 607 SKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPD 665



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 167/356 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S    +F TL+    +    +   RI + M+      +  T+  L+   CK G+++  
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEV 300

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +  +D +  +   P      SL+  + +   ++  + +L  ML++    D   Y+ +++ 
Sbjct: 301 LSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFG 360

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  +E A+ +  +M+ R FS N+  Y T I   C+  ++EEA  L + + + G+ P 
Sbjct: 361 LCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 420

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TFN LI+G         ++   E+M ++   P    +N +I  LC  G  ++A  +L 
Sbjct: 421 VCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLK 480

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G S N +TY+ LI G+ K   I+E  +++ EME + IS  +  Y +LI  LC+  
Sbjct: 481 EMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNR 540

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++EEA +    M    L P    Y SL+      G+  KA  + + M S G +P +
Sbjct: 541 RVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDS 596



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 136/255 (53%)

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           RM+ + +  D   +++++ A  +   +  A+++ EEM   G S +   +TT +  + E G
Sbjct: 201 RMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            +  A  + ++M  AG    + T N+L+ G  K  RIEE LS+ ++M +    P    FN
Sbjct: 261 NMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  LC  G+ K A  +L + L +GF P+  TY+ LI G  K GE++E +++  +M  +
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
             SP    Y +LIS+LC+  ++EEA +  +++ S  ++P V  + SL+       N   A
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440

Query: 358 LHLCEEMVSEGLKPS 372
           + L EEM ++G  P 
Sbjct: 441 MELFEEMKTKGCHPD 455



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 164/369 (44%), Gaps = 1/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   + Q GF   + ++N+LI  + K    +    I   M+     PN  T  TLIS
Sbjct: 335 ALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIS 394

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  Q++   ++   +  K   P V    SLI  +         M L + M  K    
Sbjct: 395 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHP 454

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++ +      LE AL + +EM   G S N   Y T I  +C+  +IEEA  + 
Sbjct: 455 DEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIF 514

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EME  G+     T+N LI+G  K +R+EE+    +QM+   L P    +N ++   C  
Sbjct: 515 DEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRA 574

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+ K+A  ++      G  P+ +TY  LI G +K G ++   +L   ++ K +      Y
Sbjct: 575 GDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTY 634

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMV 365
             +I +L +  +  EA + F+ M      P    Y+ +  G+    G   +A+    EM 
Sbjct: 635 NPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMT 694

Query: 366 SEGLKPSTS 374
            +G  P  S
Sbjct: 695 DKGFLPDFS 703



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 169/368 (45%), Gaps = 1/368 (0%)

Query: 3   LFEVAFDVCRYLEQR-GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           LF+ A  V   +E+  G  L   ++N L++V+   ++  LV  +   M+     P+  T 
Sbjct: 155 LFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTF 214

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI ALC+  Q++  + M++ +     SP     T+L+   I+E  +   + + ++M+ 
Sbjct: 215 NILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVA 274

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                  +  +++V+   K   +E  L   +EM   GF  + F + + +   C  G ++ 
Sbjct: 275 AGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKH 334

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  ++  M   G  P   T+N LI G  K   +EE++    QM+ R   P+   +N +I 
Sbjct: 335 ALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIS 394

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+    ++A  +  +   KG  P+  T++ LI G       +  ++L+ EM+ K   P
Sbjct: 395 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHP 454

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y  LI SLC  G+LEEA    K M+S      V  Y +L+    +     +A  + 
Sbjct: 455 DEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIF 514

Query: 362 EEMVSEGL 369
           +EM  +G+
Sbjct: 515 DEMELQGI 522



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 147/333 (44%), Gaps = 1/333 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   +  R FS + +++NTLI  + K ++ +    + + +      P+  T  +L
Sbjct: 368 EEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 427

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC     +  +++ + +  K C P       LI  +    R+EE + LLK M     
Sbjct: 428 IQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC 487

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ ++    K + +E A  +++EM  +G S N   Y T I   C+  ++EEA  
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ 547

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           LM +M   GLKP   T+N L+    +A  I+++    + M S    P    +  +I  L 
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  + A+ +L     KG      TY+ +I    +E    E ++L+ EM  K   P   
Sbjct: 608 KAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAV 667

Query: 305 AYTSLISSLCQ-CGKLEEADKYFKIMKSHSLVP 336
            Y  +   LC   G + EA  +   M     +P
Sbjct: 668 TYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLP 700



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 143/326 (43%), Gaps = 10/326 (3%)

Query: 54  RYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           + P   T + L  AL +     + +D+LD    +       V +S+I   +  +  ++G 
Sbjct: 65  QLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPN----FVPSSVIYEEVLRKLGKDGS 120

Query: 114 VLLKRMLRKNMIHDTI-----AYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYT 167
               R + + M H         + +++ +  K    + A+ V + M +  G   ++F Y 
Sbjct: 121 FGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYN 180

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             +    +  K++    +   M + G+KP   TFN+LI+   +A +I  ++   E+M S 
Sbjct: 181 FLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSY 240

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            L P    F  +++   E GN   A  +    +  G   + +T + L+ GY KEG I+EV
Sbjct: 241 GLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEV 300

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           L    EM  +   P    + SL++ LC+ G ++ A +   +M      P +  Y SL+  
Sbjct: 301 LSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFG 360

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
             + G   +A+ +  +M+     P+T
Sbjct: 361 LCKLGEVEEAVEILNQMILRDFSPNT 386



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 124/288 (43%), Gaps = 7/288 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIR 62
            E A  + + +E  G S +++++NTLI    K+ R +    I+  M L+ I   N  T  
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISR-NVVTYN 530

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI  LCK  +++    ++D++  +   P      SL+    +   I++   +++ M   
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D++ Y  ++    K   +E A  +   +  +G       Y   I A     +  EA
Sbjct: 591 GCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEA 650

Query: 183 NCLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
             L +EM   G  P   T+ ++  G C+    I E++ +  +M  +  LP  S+F  +  
Sbjct: 651 VRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAE 710

Query: 242 RLCECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVL 288
            LC          ++   + +  FS +E++   +I G+ K  + Q+ L
Sbjct: 711 GLCALSMEDTLIKLVNRVMKQANFSDSEVS---MIMGFLKIRKFQDAL 755


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 175/368 (47%), Gaps = 4/368 (1%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D C+  EQ   +G     I++ TLI   +K+ + D   ++   ML     P   T  +++
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK   +    +++ ++  + C P + + TSL+   + + R EE   +L  M  +   
Sbjct: 511 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 570

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++        +  A  V++ M+++G + ++  Y T I  + + G +E A  +
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 630

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++ M  +G+ P    +N L++G  K +R++++    ++M++  + P+   FN ++  L +
Sbjct: 631 LELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFK 690

Query: 246 CGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
            G   +A  +    L+K    P  ++Y+ LI G  K G + E    + EM  + I P   
Sbjct: 691 DGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECH 750

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YTSLI SL + G++ EA K  + M    + P V  Y +L+   ++      A  + +EM
Sbjct: 751 TYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEM 810

Query: 365 VSEGLKPS 372
           +  G  P+
Sbjct: 811 MKRGCAPN 818



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 175/395 (44%), Gaps = 29/395 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   + + G     ++F TLI  ++   + D    +Y+ M+E    P      +LI 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G++    ++   +  K+ +   +   SL+    +  R+++G+ LL +M+  +   
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC-- 184
           D   Y+++V    +   L+ AL +++ +   G   N+  YTT I    +  ++EEA    
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357

Query: 185 ---------------------------LMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
                                      L ++++ AG  P    +  +I+G  KA RIE+ 
Sbjct: 358 DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDG 417

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           L   E M     +P+ + +  +I  LC+      A  +    + KG  P+ ITY+ LI G
Sbjct: 418 LKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDG 477

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           ++K  ++ E  KL   M  K   PT   Y S++   C+   + EA +    M+     PG
Sbjct: 478 FSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPG 537

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + I+ SL+  +L KG   +A  +  EM + G  P 
Sbjct: 538 LFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 572



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 160/325 (49%), Gaps = 1/325 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++   +   G   +++S+NT+I  +   D+ D  ++ +  M++N   P+    
Sbjct: 34  RKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAF 93

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI   CK GQ Q    +L++   KR  P V + TS+I    +   ++ G  +L+ ML 
Sbjct: 94  TTLIHGFCKAGQPQVGHMLLNQAL-KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLA 152

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              I D  AY +++    K+  ++ A  ++E M K G   +   + T I A   +GK++E
Sbjct: 153 AGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDE 212

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L +EM   G +PY E  + LI    KA +++E+    + ++++K+  S  A+N ++ 
Sbjct: 213 ACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMD 272

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G       +L   ++    P+  TY+ L+ G+++   + + L+L+  +      P
Sbjct: 273 GYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKP 332

Query: 302 TLPAYTSLISSLCQCGKLEEADKYF 326
               YT++I  L    ++EEA  +F
Sbjct: 333 NAATYTTIIQGLYDAQRMEEAKAFF 357



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 165/395 (41%), Gaps = 36/395 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+  G S +++++  +I  + K+ R +   + ++ M  +   P   T   +I  LCK   
Sbjct: 389 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQM 448

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     + +++  K C P  I  T+LI    +  +++E   LL  ML K      + Y  
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 508

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           IV+   K+  +  A  V  +M +RG     F++T+ +  Y   G+ EEA  ++ EM   G
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    +  LI+      R+ E+    + M+ +   P    +  +I+   + GN + A 
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYA---------------------------------- 279
            +L L    G  P+   Y+ L+ GY                                   
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 280 -KEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            K+G+      L+ EM E   + PTL +YT LI  L + G++ EA   F+ M    ++P 
Sbjct: 689 FKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPE 748

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              Y SL+    + G   +A  L E+MV  G+ P 
Sbjct: 749 CHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPD 783



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 169/367 (46%), Gaps = 6/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + L   G   +  ++ T+I  +  + R +     +   L+ I Y       T+I 
Sbjct: 318 ALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISY------TTVIK 371

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L    ++    ++ +++    CSP V+  T++I  +++  RIE+G+   + M   + + 
Sbjct: 372 GLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVP 431

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y++++    K + L  A  V+E+M+++G   ++  YTT I  + +  K++EA  L+
Sbjct: 432 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 491

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G +P   T+  ++ G  K   I E+     QM  R   P    F  ++      
Sbjct: 492 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 551

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G A++A  +LT    +G +P+ I Y+ LI      G + E   ++  M  K  +P    Y
Sbjct: 552 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 611

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            ++I +  + G +E A +  ++M    + P    Y SL+  +++     +A  + + MV+
Sbjct: 612 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 671

Query: 367 EGLKPST 373
            G+KP+ 
Sbjct: 672 SGIKPNA 678



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 174/393 (44%), Gaps = 42/393 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
             G    +I+F TLIH   K+ +  +   +    L+  R P+     ++I   CK G L 
Sbjct: 83  DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR-PDVFLYTSVIHGYCKAGDLD 141

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           T   +L+ +    C P       LI  + +  R++E   L +RM +   + D + +  ++
Sbjct: 142 TGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLI 201

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM------ 189
            A      L+ A  +Y EM++RG+     V  + I A C+ GK++EAN + Q +      
Sbjct: 202 EALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVA 261

Query: 190 ------------------ENAGLK-----------PYDETFNLLIEGCAKAKRIEESLSY 220
                              + GLK           P  +T+N+L+ G ++A R++++L  
Sbjct: 262 TSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALEL 321

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            + + S    P+ + +  +I+ L +    ++A      ALD       I+Y+ +I G A 
Sbjct: 322 FKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDV------ISYTTVIKGLAD 375

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
              I E  +L+ +++    SP + AYT++I  L + G++E+  K F+ M   S VP    
Sbjct: 376 SKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTT 435

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           Y  ++    +      A  + E+MV +G  P T
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDT 468



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 163/369 (44%), Gaps = 3/369 (0%)

Query: 8   FDVCRYLEQRGF---SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +D  R  E + F   +L +IS+ T+I  +  S R D    +++ +      PN      +
Sbjct: 345 YDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAV 404

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K G+++  +   + + G  C P     T +I  + + + + +   + ++M++K  
Sbjct: 405 IDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGC 464

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + DTI Y+ ++    K   ++ A  + + ML +G    +  Y + +  +C+   I EA  
Sbjct: 465 VPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKE 524

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++ +M   G +P    F  L+       R EE+     +M +R   P    +  +I  L 
Sbjct: 525 VIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLF 584

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A  +    ++KG +P+ +TY  +I  ++K G ++   ++   M    + P   
Sbjct: 585 STGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCF 644

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY SL+    +  ++++A   +  M +  + P    +  L+    + G   +A  L +EM
Sbjct: 645 AYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEM 704

Query: 365 VSEGLKPST 373
           + +   P T
Sbjct: 705 LEKDEVPPT 713



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/341 (22%), Positives = 156/341 (45%), Gaps = 1/341 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A D  + +   G    +++ N +++ + K+ + D    ++  M      P   +  T+
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS L    ++       + +    C P VI  T+LI    +  + + G +LL + L++  
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-F 120

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ +++   K  +L++   + EEML  G   ++  Y   I   C+ G+++EA  
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L + M  +G      TF  LIE  +   +++E+     +M+ R   P     + +I  LC
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   +AN +    + K  + + + Y+ L+ GY K G + + LKL  +M      P + 
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQ 300

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            Y  L++   +  +L++A + FK++ S+   P    Y +++
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII 341



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 1/279 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A+ V   +  RG +  +I + +LI ++  + R      ++  M+E    P+  T  T+
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I    K G ++   ++L+ +      P      SL+   ++ ER+++   +  RM+   +
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV-YTTFIGAYCEYGKIEEAN 183
             + + ++++++   K    + A  +++EML++     + V YT  I    + G++ EA 
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
              QEM + G+ P   T+  LI   AKA RI E+    E M+   + P   A++ +I  L
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 794

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            +      A  +    + +G +PNE+TY  L  G+   G
Sbjct: 795 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 1/228 (0%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E AL   +EM   G   +       +   C+  KI++A  L  EM + G +P   ++N 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I G A   +++E+  +   M+     P   AF  +I   C+ G  +  + +L  AL K 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KR 119

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           F P+   Y+ +I GY K G++    K+  EM      P   AY  LI  LC+ G+++EA 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           + F+ M+    +     + +L+      G   +A  L  EM+  G +P
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 134/293 (45%), Gaps = 3/293 (1%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++  +D L  +H     P V VN +++L  + +  +I++ + L   M         ++Y+
Sbjct: 1   MEEALDCLKEMHTTGLMPDV-VNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYN 59

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++     +  ++ A   +  M+  G   +   +TT I  +C+ G+ +  + L+ +    
Sbjct: 60  TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR 119

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P    +  +I G  KA  ++      E+M++   +P  +A+  +I  LC+ G   +A
Sbjct: 120 -FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +       G   + +T+  LI   +  G++ E  +LY EM  +   P L    SLI +
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           LC+ GK++EA++ ++ + +  +      Y SL+  + + G     L L  +MV
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMV 291


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 2/368 (0%)

Query: 7   AFDVCRYLEQRGFSL--SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           A D+ R   ++G     +++ ++T++H + K  +      ++  M +    PN  T  ++
Sbjct: 193 ALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSV 252

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I ALCK   +     +L ++ G    P  +   +LI       + ++ + + K M  + +
Sbjct: 253 IHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGV 312

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I +T+  S  V    K   +E A   ++ ML +G   N   Y+T +  Y   G + + + 
Sbjct: 313 IPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSN 372

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   M   G+ P    FN+L+ G AK   + E++   E M  R L P    +  +I   C
Sbjct: 373 LFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFC 432

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+   A       +DKG  PN   Y  LI G+   G++ +  +L YE+  K + P + 
Sbjct: 433 RMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCIL 492

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           ++ SLI+ LC+ G++ EA + F ++        V+I+ SL+  +   G  ++A  + + M
Sbjct: 493 SFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAM 552

Query: 365 VSEGLKPS 372
           VS G++P 
Sbjct: 553 VSVGIEPD 560



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 174/360 (48%), Gaps = 4/360 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++ +++ LI    ++ R DL +  +  +L      +   + +L+  LC   +    VD+L
Sbjct: 102 TVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVL 161

Query: 82  -DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK--NMIHDTIAYSLIVYAK 138
             R+    C P  I  ++++  +  + R +  + +L+  +++      + + YS +V+  
Sbjct: 162 FHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGL 221

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K   +  A  ++ EM ++G   N   Y + I A C+   +++A  ++++M   G++P +
Sbjct: 222 FKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDN 281

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N LI G +   + ++++   ++M SR ++P+    +  +  LC+ G  ++A      
Sbjct: 282 VTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDS 341

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG   N I+YS L+ GYA  G + ++  L+  M    I P    +  L++   +CG 
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS-YLC 377
           + EA   F+ M+   L P V  Y +++      G+   A+     M+ +G++P+ + Y C
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/417 (22%), Positives = 179/417 (42%), Gaps = 43/417 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   + Q+G   +++++N++IH + K+   D    I + M+ N   P+  T  TLI 
Sbjct: 230 ACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIH 289

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                GQ +  V M   +  +   P  +  ++ +  + +  RIEE       ML K    
Sbjct: 290 GYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKL 349

Query: 127 DTIAYSLIVYAK------VKMRNL-----------------------------ESALVVY 151
           + I+YS +++        V M NL                               A+ ++
Sbjct: 350 NIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIF 409

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG-CAK 210
           E+M KRG + +   Y   I A+C  G +++A      M + G++P    +  LI+G C  
Sbjct: 410 EDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTH 469

Query: 211 AKRIE-ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
              ++ E L Y  ++ ++ L P   +F  +I  LC+ G   +A  +  + +  G   +  
Sbjct: 470 GDLVKAEELVY--EIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVN 527

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            ++ LI GY   G++ E  +++  M    I P +  Y +L++  C+ G++++    F+ +
Sbjct: 528 IFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFREL 587

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK---PSTSYLCSASTCR 383
               + P    Y  ++      G  A A  + +EM+  G+    P+ S L +   CR
Sbjct: 588 LHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTG-LCR 643



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/363 (20%), Positives = 159/363 (43%), Gaps = 35/363 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG +  ++++  +IH   +    D     + HM++    PN A  + LI   C  G 
Sbjct: 412 MQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGD 471

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    +++  I  K   P ++   SLI  + +E R+ E                      
Sbjct: 472 LVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFE---------------------- 509

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
                        A  +++ +++ G  A+  ++T+ I  YC  GK+ EA  +   M + G
Sbjct: 510 -------------AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   T+  L+ GC K  RI++ L    +++ + + P+   +  ++  L   G    A 
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M    ++ G +    TYS L+ G  +    +E + ++ ++   ++   +     +IS +
Sbjct: 617 EMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKM 676

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  + EEA+  F  +  + LVP V  Y  ++   +++G+  +A  +   M+  GL P++
Sbjct: 677 FKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTS 736

Query: 374 SYL 376
            ++
Sbjct: 737 HFI 739



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/286 (20%), Positives = 127/286 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G    ++SF +LI+ + K  R     RI+  ++      +     +LI   C  G+
Sbjct: 482 IRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGK 541

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     + D +      P ++   +L+    +  RI++G++L + +L K +   T  Y +
Sbjct: 542 MSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGI 601

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+          +A  +++EM++ G +     Y+  +   C     EEA  + Q++    
Sbjct: 602 ILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMN 661

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +K      N++I    KA+R EE+      +    L+P+   +  M+  L + G+ ++A 
Sbjct: 662 VKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAE 721

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           G+ ++ L  G SP     + ++    ++GEI +       ++ KSI
Sbjct: 722 GVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSI 767



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/199 (18%), Positives = 81/199 (40%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   +   G    ++++ TL++   K+ R D    +++ +L     P   T   ++ 
Sbjct: 545 AFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILD 604

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L   G+     +M   +     +  +   + L+  + +    EE + + +++   N+  
Sbjct: 605 GLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKF 664

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +  ++++    K R  E A  ++  +   G       YT  +    + G +EEA  + 
Sbjct: 665 DIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVF 724

Query: 187 QEMENAGLKPYDETFNLLI 205
             M  +GL P     N+++
Sbjct: 725 SVMLKSGLSPTSHFINVIV 743


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 173/368 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+A  +   +++ GF+  ++++N+LI    K    D    I++ M +    P+  T   L
Sbjct: 272 EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 331

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+  CK  ++    + L  +      P V+  ++ I    +E  ++E +     M R  +
Sbjct: 332 INCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVAL 391

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   Y+ ++ A  K  NL  AL + EE+L+ G   N   YT  +   CE G+++EA  
Sbjct: 392 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 451

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + + M NAG+ P  ET+  L+ G  KAK +E +    ++M  + + P    +  ++  LC
Sbjct: 452 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLC 511

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                ++A  ++    + G + N + Y+ L+  Y K G+  E L L  EM    +  T  
Sbjct: 512 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV 571

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI  LC+ G ++EA  +F  M    L P V +Y +LV    +      A  L +EM
Sbjct: 572 TYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631

Query: 365 VSEGLKPS 372
           + +G+ P 
Sbjct: 632 LDKGMMPD 639



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 166/354 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S N L+H ++K  R DL  + ++ M       +  T   +I  LCK G L+    +  ++
Sbjct: 222 SCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM 281

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                +P ++   SLI    +   ++E + + ++M   +   D I Y+ ++    K   +
Sbjct: 282 KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERM 341

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A     EM   G   N   Y+TFI A+C+ G ++EA     +M    L P + T+  L
Sbjct: 342 PKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSL 401

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   KA  + E+L   E+++   +  +   +  ++  LCE G  K+A  +    L+ G 
Sbjct: 402 IDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 461

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN+ TY+ L+ G+ K  E++    +  EM+ K I P L  Y +++  LC   +LEEA  
Sbjct: 462 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 521

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
               +K   +     IY +L+  + + G   +AL L EEM+  GL  +    C+
Sbjct: 522 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 35/398 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+    ++  G   ++++++T I    K        + +  M      PNE T  +LI 
Sbjct: 344 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 403

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G L   + +++ I        V+  T+L+  + +E R++E   + + ML   +  
Sbjct: 404 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 463

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKR----------------------------- 157
           +   Y+ +V+  +K + +E A  + +EM ++                             
Sbjct: 464 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 523

Query: 158 ------GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
                 G + N+ +YTT + AY + G+  EA  L++EM + GL   + T+  LI+G  K+
Sbjct: 524 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKS 583

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             ++E++ +  +M    L P+ + +  ++  LC+    + A  +    LDKG  P++I Y
Sbjct: 584 GLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAY 643

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI G  K G +QE L L   M    +   L AYT+LI  L   G++++A      M  
Sbjct: 644 TALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIG 703

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             ++P   +Y  L+  +   G   +AL L  EM   G+
Sbjct: 704 KGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 4/330 (1%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR--CSPMVIVNTSLILR 102
           I  H+L   R+ ++A    L   +C    L ++ D+ D +   R  C P   V  +L   
Sbjct: 137 ILVHILFCARFYSDAN-AVLKELICLRRVLPSW-DVFDLLWATRNVCVPGFGVFDALFSA 194

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           +I+   +EE      +M +  +     + + +++   K+   + +   +++M   G   +
Sbjct: 195 LIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRS 254

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
            F Y   I   C+ G +E A  L  +M+ AG  P   T+N LI+G  K   ++E +   E
Sbjct: 255 VFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFE 314

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           QM      P    +N +I   C+     +A   L      G  PN +TYS  I  + KEG
Sbjct: 315 QMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEG 374

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            +QE +K + +M   +++P    YTSLI + C+ G L EA K  + +    +   V  Y 
Sbjct: 375 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 434

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+    E+G   +A  +   M++ G+ P+
Sbjct: 435 ALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 102/221 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G + + + + TL+    KS +      + + ML+      E T   LI  LCK G 
Sbjct: 526 IKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGL 585

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q  +    R+      P V V T+L+  + +    E    L   ML K M+ D IAY+ 
Sbjct: 586 VQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 645

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   +K  NL+ AL + + M++ G   +   YT  I      G++++A  L+ EM   G
Sbjct: 646 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG 705

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + P +  +  LI+      +++E+L    +M  R ++   S
Sbjct: 706 VLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLS 746


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 7/328 (2%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++  CKGG +     + D +     +P  +  T+L+       + E+G  L + M R 
Sbjct: 43  ALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRG 102

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +   Y+ ++    +    E A  +++EM  RG   N   Y T I   C +GK+ +A
Sbjct: 103 GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDA 162

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+  M   G +P   TFNLL++G  KA ++  +L +  QM +    PS   +N +I  
Sbjct: 163 AKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAG 222

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C   +  +AN  L+   ++G  P ++TY+ LI  +A+E  + +  ++   ME   +   
Sbjct: 223 FCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVD 282

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y  L+ +LC  G +++A K F+ M    + P   IY+ ++  +  +G+  KAL L  
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342

Query: 363 EMVSEGLKP-STSY------LCSASTCR 383
           EM  +GL P S SY      LC    C+
Sbjct: 343 EMRQKGLIPNSASYGLTIRVLCKDDKCQ 370



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 138/314 (43%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G + + +++  L+H      + +  + +++ M      PN  T   LI   C+ G+ +  
Sbjct: 68  GLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA 127

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             + D +  +     V+   +LI  + +  ++ +   LL  M  +      I ++L+V  
Sbjct: 128 RSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDG 187

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   + +AL  + +M   GF  ++  Y   I  +C    +  AN  + +M+  GL+P 
Sbjct: 188 YGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPT 247

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ +LI+  A+   + ++      M    L      +  ++R LC  GN K A  +  
Sbjct: 248 KVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQ 307

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG  P+ + Y  +I GY +EG   + LKL  EM  K + P   +Y   I  LC+  
Sbjct: 308 SMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367

Query: 318 KLEEADKYFKIMKS 331
           K +EA+     M++
Sbjct: 368 KCQEAEALLDDMET 381



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 1/280 (0%)

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVV 150
           M     + + R+     +   + +L R  +  +   D  A + +V    K  ++  A  V
Sbjct: 1   MWGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRV 60

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           ++EM   G + N   YT  +  Y  +G+ E+   L +EM   G++P   T+N LI    +
Sbjct: 61  FDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
               E + S  ++M  R ++ +  ++N +I  LC  G    A  +L +   +G  P+ IT
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           ++ L+ GY K G++   L  + +M+     P+   Y  LI+  C+   +  A++    MK
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              L P    Y  L+     + +  KA  +   M   GL+
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLE 280



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/253 (18%), Positives = 109/253 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  +   +  RG   +++S+NTLI  + +  +     ++   M      P+  T   
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNL 183

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+    K G++   +   +++      P  +    LI    +   +      L  M  + 
Sbjct: 184 LVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + Y++++ +  +  ++  A  +   M K G   ++  Y   + A C  G +++A 
Sbjct: 244 LEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDAR 303

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L Q M   G++P +  ++++I G  +     ++L    +M  + L+P+ +++   IR L
Sbjct: 304 KLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVL 363

Query: 244 CECGNAKQANGML 256
           C+    ++A  +L
Sbjct: 364 CKDDKCQEAEALL 376


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 183/368 (49%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +EQ      ++ + ++I  + K  +    + ++  M+     P+  T  +L+ 
Sbjct: 180 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 239

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC   + +    +L+++   +  P V++ ++++  + +E ++ E   ++  M+++ +  
Sbjct: 240 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 299

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++        ++ A+ V++ M+++GF+ +   YTT I  YC+  KI++A  L 
Sbjct: 300 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 359

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM      P  +T+N L+ G     R++++++   +M++R  +P    ++ ++  LC+ 
Sbjct: 360 EEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 419

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            + ++A  +L        +P+   Y+ +I G  + GE++    L+  +  K + P++  Y
Sbjct: 420 CHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 479

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I  LC+ G L EA+K F  M  +   P    Y ++    L+     +A+ L EEM++
Sbjct: 480 NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 539

Query: 367 EGLKPSTS 374
            G     S
Sbjct: 540 RGFSADVS 547



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 171/366 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G      +F TLI  +    +      ++  M++    PN  T  TLI+
Sbjct: 110 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 169

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G     + +L  +    C P V++ TS+I  + ++ ++ E   L  +M+ + +  
Sbjct: 170 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 229

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ +V+A   +   +    +  +M+      +  +++T + A C+ GK+ EA+ ++
Sbjct: 230 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 289

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G++P   T+  L++G      ++E++   + M+ +   P   ++  +I   C+ 
Sbjct: 290 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 349

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +      K + P+  TY+ L+ G    G +Q+ + L++EM  +   P L  Y
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+ SLC+   LEEA    K +++ +L P + +Y  ++      G    A  L   + S
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469

Query: 367 EGLKPS 372
           +GL PS
Sbjct: 470 KGLHPS 475



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 172/372 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +     +   ++  G   ++ + N LI+     +R    + +   +L+    P+  T
Sbjct: 69  MKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTT 128

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC  G++   + + D++  +   P V+   +LI  + +       + LL+ M 
Sbjct: 129 FTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 188

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           + N   D + Y+ I+ +  K R +  A  ++ +M+ +G S + F YT+ + A C   + +
Sbjct: 189 QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWK 248

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
               L+ +M N+ + P    F+ +++   K  ++ E+    + M+ R + P    +  ++
Sbjct: 249 HVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLM 308

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C      +A  +  + + KGF+P+ I+Y+ LI GY K  +I + + L+ EM  K   
Sbjct: 309 DGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI 368

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y +L+  LC  G+L++A   F  M +   +P +  Y  L+    +  +  +A+ L
Sbjct: 369 PDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMAL 428

Query: 361 CEEMVSEGLKPS 372
            + + +  L P 
Sbjct: 429 LKAIEASNLNPD 440



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/358 (20%), Positives = 150/358 (41%), Gaps = 10/358 (2%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q  F    + FNTL   ++  +R          +L     P+      L++++ K     
Sbjct: 24  QNNFHSKSLHFNTLDDALSSFNR----------LLHMHPPPSIVDFAKLLTSIAKMKHYS 73

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           T + +  ++      P V     LI       R+     +L ++L+     D   ++ ++
Sbjct: 74  TVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLI 133

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   +  AL ++++M+  GF  N   Y T I   C+ G    A  L++ ME    +
Sbjct: 134 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 193

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  +I+   K +++ E+ +   QM+ + + P    +  ++  LC     K    +
Sbjct: 194 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 253

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   ++    P+ + +S ++    KEG++ E  ++   M  + + P +  YT+L+   C 
Sbjct: 254 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 313

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +++EA K F +M      P V  Y +L+  + +     KA++L EEM  +   P T
Sbjct: 314 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 371


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 172/396 (43%), Gaps = 35/396 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRI---------------------------- 45
           +E +G++  +IS++T+++   +    D VW++                            
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331

Query: 46  -------YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
                  +  M+     P+     TLI   CK G ++        +H +  +P V+  T+
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           +I    Q   + E   L   M  K +  D++ ++ ++    K  +++ A  V+  M++ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            S N   YTT I   C+ G ++ AN L+ EM   GL+P   T+N ++ G  K+  IEE++
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
               +  +  L      +  ++   C+ G   +A  +L   L KG  P  +T++ L+ G+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
              G +++  KL   M  K I+P    + SL+   C    L+ A   +K M S  + P  
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             YE+LV  H +  N  +A  L +EM  +G   S S
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 174/378 (46%), Gaps = 10/378 (2%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            A  V R   + G   ++ S+N +IH V +  R      +   M      P+  +  T++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           +  C+ G+L     +++ +  K   P   +  S+I  + +  ++ E       M+R+ ++
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            DT+ Y+ ++    K  ++ +A   + EM  R  + +   YT  I  +C+ G + EA  L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             EM   GL+P   TF  LI G  KA  ++++      M+     P+   +  +I  LC+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+   AN +L      G  PN  TY+ ++ G  K G I+E +KL  E E   ++     
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG---IH--LEKGNKAKALHL 360
           YT+L+ + C+ G++++A +  K M    L P +  +  L+    +H  LE G K     L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK-----L 583

Query: 361 CEEMVSEGLKPSTSYLCS 378
              M+++G+ P+ +   S
Sbjct: 584 LNWMLAKGIAPNATTFNS 601



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 144/287 (50%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   LI+  CK G ++    + + +    CSP V+  T+LI  + +E  ++    L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M +  +  +   Y+ IV    K  N+E A+ +  E    G +A++  YTT + AYC+
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++++A  +++EM   GL+P   TFN+L+ G      +E+       M+++ + P+ + 
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN ++++ C   N K A  +      +G  P+  TY +L+ G+ K   ++E   L+ EM+
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            K  S ++  Y+ LI    +  K  EA + F  M+   L    +I++
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 132/284 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G     ++F  LI+   K+      +R++ HM++    PN  T  TLI  LCK G L +
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             ++L  +      P +    S++  + +   IEE + L+       +  DT+ Y+ ++ 
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   ++ A  + +EML +G       +   +  +C +G +E+   L+  M   G+ P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TFN L++       ++ + +  + M SR + P    +  +++  C+  N K+A  + 
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                KGFS +  TYS LI G+ K  +  E  +++ +M  + ++
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 42/286 (14%)

Query: 129 IAYSLI--VYAKVKMRNLESALVVYEEML---KRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +A SLI   + + K+ N+  + V + ++L    + + ++  V+  F     ++G + EA 
Sbjct: 137 VAQSLISSFWERPKL-NVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREAR 195

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAK-AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            + ++M N GL    ++ N+ +   +K   +   ++    +     +  + +++N +I  
Sbjct: 196 RVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHF 255

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL------------ 290
           +C+ G  K+A+ +L L   KG++P+ I+YS ++ GY + GE+ +V KL            
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315

Query: 291 -----------------------YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
                                  + EM  + I P    YT+LI   C+ G +  A K+F 
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            M S  + P V  Y +++    + G+  +A  L  EM  +GL+P +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 91/217 (41%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
            E  G +   +++ TL+    KS   D    I + ML     P   T   L++  C  G 
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+    +L+ +  K  +P      SL+ +      ++    + K M  + +  D   Y  
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K RN++ A  +++EM  +GFS +   Y+  I  + +  K  EA  +  +M   G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           L    E F+   +   K KR +  +   ++++   L+
Sbjct: 697 LAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 7/328 (2%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++  CKGG +     + D +     +P  +  T+L+       + E+G  L + M R 
Sbjct: 43  ALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRG 102

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +   Y+ ++    +    E A  +++EM  RG   N   Y T I   C +GK+ +A
Sbjct: 103 GVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDA 162

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+  M   G +P   TFNLL++G  KA ++  +L +  QM +    PS   +N +I  
Sbjct: 163 AKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAG 222

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C   +  +AN  L+   ++G  P ++TY+ LI  +A+E  + +  ++   ME   +   
Sbjct: 223 FCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVD 282

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y  L+ +LC  G +++A K F+ M    + P   IY+ ++  +  +G+  KAL L  
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342

Query: 363 EMVSEGLKP-STSY------LCSASTCR 383
           EM  +GL P S SY      LC    C+
Sbjct: 343 EMRQKGLIPNSASYGLTIRVLCKDDKCQ 370



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 138/314 (43%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G + + +++  L+H      + +  + +++ M      PN  T   LI   C+ G+ +  
Sbjct: 68  GLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERA 127

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             + D +  +     V+   +LI  + +  ++ +   LL  M  +      I ++L+V  
Sbjct: 128 RSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDG 187

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   + +AL  + +M   GF  ++  Y   I  +C    +  AN  + +M+  GL+P 
Sbjct: 188 YGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPT 247

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ +LI+  A+   + ++      M    L      +  ++R LC  GN K A  +  
Sbjct: 248 KVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQ 307

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG  P+ + Y  +I GY +EG   + LKL  EM  K + P   +Y   I  LC+  
Sbjct: 308 SMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367

Query: 318 KLEEADKYFKIMKS 331
           K +EA+     M++
Sbjct: 368 KCQEAEALLDDMET 381



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 1/280 (0%)

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVV 150
           M     + + R+     +   + +L R  +  +   D  A + +V    K  ++  A  V
Sbjct: 1   MWGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRV 60

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           ++EM   G + N   YT  +  Y  +G+ E+   L +EM   G++P   T+N LI    +
Sbjct: 61  FDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
               E + S  ++M  R ++ +  ++N +I  LC  G    A  +L +   +G  P+ IT
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           ++ L+ GY K G++   L  + +M+     P+   Y  LI+  C+   +  A++    MK
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              L P    Y  L+     + +  KA  +   M   GL+
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLE 280



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/253 (18%), Positives = 109/253 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  +   +  RG   +++S+NTLI  + +  +     ++   M      P+  T   
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNL 183

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+    K G++   +   +++      P  +    LI    +   +      L  M  + 
Sbjct: 184 LVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERG 243

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + Y++++ +  +  ++  A  +   M K G   ++  Y   + A C  G +++A 
Sbjct: 244 LEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDAR 303

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L Q M   G++P +  ++++I G  +     ++L    +M  + L+P+ +++   IR L
Sbjct: 304 KLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVL 363

Query: 244 CECGNAKQANGML 256
           C+    ++A  +L
Sbjct: 364 CKDDKCQEAEALL 376


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 179/353 (50%), Gaps = 1/353 (0%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S  L +F+++IH ++K+   +   +++Q M+E+   P+  T   ++S L + G+L    +
Sbjct: 287 SPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFE 346

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           + + +    C  +V  N  LI  ++  +++E+ +   + +  + +  D+  Y L++    
Sbjct: 347 LWNVMSKNNCCNIVSYNM-LIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLC 405

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   L  AL + EE    G   ++F Y++ +   C+ G +E+A  L+ +M+    K    
Sbjct: 406 KNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSH 465

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            FN LI G  +A ++EE++S   +M S+   P+  ++N +I  LC+      A   L   
Sbjct: 466 VFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEM 525

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L++G  P+ ITYS LI G  +  ++   L L+++   K + P L  +  +I  LC   K+
Sbjct: 526 LEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKV 585

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + A + F  M+  + VP +  + +++    + G+  +AL + + ++  GL+P 
Sbjct: 586 DVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPD 638



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 172/362 (47%), Gaps = 2/362 (0%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           Y +  G S +L ++N LI +  K  + +    +   M EN   P+  +  TLI+AL K G
Sbjct: 139 YFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSG 198

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AY 131
            L   V++ D +  +  +P V+    LI   +++    +   + KR+L ++ ++ ++  Y
Sbjct: 199 NLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETY 258

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++    K+  L+ ++ ++  M K   S + F +++ I    + G    A  + QEM  
Sbjct: 259 NIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIE 318

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           +GL P   T+N ++ G  +  ++ +       +MS+    +  ++N +I+ L +    +Q
Sbjct: 319 SGLSPDVRTYNAMLSGLFRTGKLNKCFELW-NVMSKNNCCNIVSYNMLIQGLLDNKKVEQ 377

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A     L  ++G   +  TY  LI G  K G + + L++  E E +       AY+S++ 
Sbjct: 378 AICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVH 437

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+ G LE+A +    MK +       ++ SL+  ++      +A+ +  EM S+   P
Sbjct: 438 GLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAP 497

Query: 372 ST 373
           + 
Sbjct: 498 TV 499



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/324 (21%), Positives = 149/324 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+N LI  +  + + +     +Q + E     +  T   LI+ LCK G L   + +L
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRIL 417

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +    +         +S++  + ++  +E+ + L+ +M +     ++  ++ ++   V+ 
Sbjct: 418 EEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRA 477

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             LE A+ V  EM  +  +     Y T I   C+  +  +A   ++EM   GLKP   T+
Sbjct: 478 FKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITY 537

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           +LLI+G  + ++++ +L+   Q ++++L P     N +I  LC       A  + T    
Sbjct: 538 SLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQ 597

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
               P+ +T++ ++ G  K G+  E LK++  +    + P + +Y      LC C ++ +
Sbjct: 598 VNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSD 657

Query: 322 ADKYFKIMKSHSLVPGVDIYESLV 345
           A ++        ++P    +  LV
Sbjct: 658 AIEFLYDALDRGILPNAPTWNVLV 681



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 123/272 (45%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           E  G  L   ++++++H + K    +    +   M +N R  N     +LI+   +  +L
Sbjct: 421 ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKL 480

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +  + +L  +  K C+P V+   ++I  + + ER  +  + LK ML + +  D I YSL+
Sbjct: 481 EEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    +   ++ AL ++ + + +    +  ++   I   C   K++ A  +  +M     
Sbjct: 541 IDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T N ++EG  KA    E+L   ++++   L P   ++N   + LC C     A  
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIE 660

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            L  ALD+G  PN  T++ L+     +  + E
Sbjct: 661 FLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 137/314 (43%), Gaps = 2/314 (0%)

Query: 10  VCRY--LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           +C +  L +RG      ++  LI+ + K+   +   RI +         +     +++  
Sbjct: 379 ICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHG 438

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK G L+  V+++ ++   R      V  SLI   ++  ++EE + +L+ M  K+    
Sbjct: 439 LCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPT 498

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            ++Y+ I+    K      A +  +EML+ G   +   Y+  I   C   K++ A  L  
Sbjct: 499 VVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWH 558

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +  N  LKP  +  N++I G   A++++ +L    QM     +P     N ++  L + G
Sbjct: 559 QCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAG 618

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
           +  +A  +    L+ G  P+ I+Y+    G      + + ++  Y+   + I P  P + 
Sbjct: 619 DCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWN 678

Query: 308 SLISSLCQCGKLEE 321
            L+ ++     L E
Sbjct: 679 VLVRAVVDDKPLME 692



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 136/304 (44%), Gaps = 6/304 (1%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L  + +M+D I G  C+P +    S++   I+  +  E  +         M  +   Y++
Sbjct: 98  LNLFQNMVD-IFG--CNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K R  E    +   M + G + +   Y T I A  + G + +A  L  EM   G
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQA 252
           + P    +N+LI+G  +     ++    +++++   + PS   +N MI  LC+ G   ++
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             M         SP+  T+S +I G +K G      K++ EM    +SP +  Y +++S 
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSG 334

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP- 371
           L + GKL +  + + +M  ++    V  Y  L+   L+     +A+   + +   GLK  
Sbjct: 335 LFRTGKLNKCFELWNVMSKNNCCNIVS-YNMLIQGLLDNKKVEQAICYWQLLHERGLKAD 393

Query: 372 STSY 375
           ST+Y
Sbjct: 394 STTY 397



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/322 (19%), Positives = 139/322 (43%), Gaps = 45/322 (13%)

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY-- 151
           +++ +L+L++++ E+     + +         H   A+   V+  +  R ++  LVV+  
Sbjct: 7   VISPTLVLKLLKAEKNPNAALAI---FDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVG 63

Query: 152 ---EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA-GLKPYDETFNLLIEG 207
              + M  +  + +  V  + I AY +    ++A  L Q M +  G  P   +FN ++  
Sbjct: 64  RIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNA 123

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             ++ +  E+  +     +  + P+   +N +I+  C+    ++  G+LT   + G +P+
Sbjct: 124 FIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPD 183

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYK------------------------------ 297
            ++Y  LI   AK G + + ++L+ EM  +                              
Sbjct: 184 ILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWK 243

Query: 298 ------SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
                 S+ P++  Y  +I+ LC+ GKL+E+ + +  MK +   P +  + S++    + 
Sbjct: 244 RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKA 303

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           GN   A  + +EM+  GL P  
Sbjct: 304 GNFNAAEKVFQEMIESGLSPDV 325



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 102/213 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  V R ++ +  + +++S+NT+I+ + K++R    +   + MLE    P+  T   
Sbjct: 480 LEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSL 539

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC+G ++   +++  +   KR  P + ++  +I  +   ++++  + +  +M + N
Sbjct: 540 LIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVN 599

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + D + ++ I+    K  +   AL +++ +L+ G   +   Y       C   ++ +A 
Sbjct: 600 CVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAI 659

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
             + +  + G+ P   T+N+L+      K + E
Sbjct: 660 EFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 188/368 (51%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A+++ + + + G  +++ + N +I+ + K+ + +        M E   +P+  T  TL
Sbjct: 236 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 295

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+A C+ G L+   +++D + GK   P V    ++I  + +  +      +L  ML+  M
Sbjct: 296 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 355

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DT  Y++++    +  N+  A  +++EM  +G   +   ++  IG   + G +++A  
Sbjct: 356 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 415

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             ++M+NAGL P +  + +LI G  +   + E+L   ++M+ +  +     +N ++  LC
Sbjct: 416 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLC 475

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A+ + T   ++G  P+  T++ LI GY+K+G + + + L+  M  +++ P + 
Sbjct: 476 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV 535

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI   C+  ++E+ ++ +  M S  + P    Y  L+  +   G  ++A  L +EM
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595

Query: 365 VSEGLKPS 372
           V +G + +
Sbjct: 596 VEKGFEAT 603



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 168/362 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G    L+SF+ LI +++K+   D   + ++ M      P+      LI   C+ G 
Sbjct: 385 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 444

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + + D +  + C   V+   +++  + +E+ + E   L   M  + +  D   ++ 
Sbjct: 445 MSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 504

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  N+  A+ ++E M++R    +   Y T I  +C+  ++E+ N L  +M +  
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 564

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++ +LI G      + E+    ++M+ +    +    N +++  C  GNA +A+
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 624

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             L+  L KG  P+ ITY+ LI G+ KE  +     L  +ME   + P +  Y  +++  
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 684

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G+++EA+     M    + P    Y SL+  H+ + N  +A  + +EM+  G  P  
Sbjct: 685 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744

Query: 374 SY 375
            +
Sbjct: 745 KF 746



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 170/370 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF++   +  +G    + ++N +I+ + K+ +      +   ML+    P+ AT  
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   C+   +     + D +  +   P ++  ++LI  + +   +++ +   + M   
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 423

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y++++    +   +  AL V +EML++G   +   Y T +   C+   + EA
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  EM   G+ P   TF  LI G +K   + ++++  E M+ R L P    +N +I  
Sbjct: 484 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 543

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+    ++ N +    + +   PN I+Y  LI GY   G + E  +L+ EM  K    T
Sbjct: 544 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 603

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +    +++   C+ G   +AD++   M    +VP    Y +L+   +++ N  +A  L  
Sbjct: 604 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 663

Query: 363 EMVSEGLKPS 372
           +M + GL P 
Sbjct: 664 KMENSGLLPD 673



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 18/350 (5%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  SL SF+ +IH++ +S R      +   M+          + +L+      G      
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           D+L R +                  +Q  ++ EG    + +  K +     A + ++   
Sbjct: 188 DLLVRTY------------------VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGL 229

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           VK+  ++ A  +Y+E+++ G   N +     I A C+  KIE     + +ME  G+ P  
Sbjct: 230 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 289

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N LI    +   +EE+    + M  + L P    +N +I  LC+ G   +A G+L  
Sbjct: 290 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 349

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L  G SP+  TY+ L+    +   + +  +++ EM  + + P L ++++LI  L + G 
Sbjct: 350 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 409

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L++A KYF+ MK+  L P   IY  L+G     G  ++AL + +EM+ +G
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 20/253 (7%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEE 181
           N  H   ++S +++  V+ R L  A  V   M+++ G S                 ++E 
Sbjct: 127 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVS-----------------RVEI 169

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              L+    N G  P    F+LL+    +A+++ E       + S+ L  S +A N ++ 
Sbjct: 170 VESLVLTYGNCGSNPL--VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLG 227

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L + G    A  +    +  G   N  T + +I    K  +I+       +ME K + P
Sbjct: 228 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP 287

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI++ C+ G LEEA +    M    L P V  Y +++    + G   +A  + 
Sbjct: 288 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 347

Query: 362 EEMVSEGLKPSTS 374
           +EM+  G+ P T+
Sbjct: 348 DEMLKIGMSPDTA 360


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 179/404 (44%), Gaps = 36/404 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  +   ++   F+  L+ +N  I    K  + D+ W+ +  M      P++ T  TL
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK  +L   V++ + +   R  P V    ++I+      + +E   LL+R  RK  
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC 374

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I   IAY+ I+    +   +E AL +++EM ++  + N   Y   I   C+ G++E A  
Sbjct: 375 IPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALK 433

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +   M+ AGL P   T N++I+   KA++++E+ S    +  +   P    F  +I  L 
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A  +    LD    PN + Y+ LI  + K G  ++  K+Y EM ++  SP L 
Sbjct: 494 RRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLM 553

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV------------------- 345
              S +  + + G++E+    F+ +K+  LVP V  Y  L+                   
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613

Query: 346 ---GIHLE-------------KGNKAKALHLCEEMVSEGLKPST 373
              G+HL+              G   KA  L EEM ++GL+P+ 
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 171/350 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F +LI  + +  R D  + +Y+ ML++ + PN     +LI    K G+ +    +   +
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             + CSP +++  S +  + +   +E+G  L + +  + ++ D  +YS++++  VK    
Sbjct: 544 VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFS 603

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                ++ EM ++G   +   Y T I  +C+ GK+++A  L++EM+  GL+P   T+  +
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++G AK  R++E+    E+  S  +  +   ++ +I    + G   +A  +L   + KG 
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN  T++ L+    K  EI E    +  M+    SP    Y+ +I+ LC   K  +A  
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFV 783

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +++ M+   L P    Y +++    + GN  +A  L +   + G  P ++
Sbjct: 784 FWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSA 833



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 186/370 (50%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +    +++G   S+I++N ++  + +  + +   RI+  M ++   PN  T   
Sbjct: 359 FDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLTTYNI 417

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LCK G+L+  + + D +      P ++    +I R+ + ++++E   +   +  K 
Sbjct: 418 LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D+  +  ++    +   ++ A  +YE+ML      N  VYT+ I  + + G+ E+ +
Sbjct: 478 CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH 537

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM + G  P     N  ++   KA  +E+  +  E++ ++ L+P   +++ +I  L
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G +++   +     ++G   + + Y+ +I G+ K G++ +  +L  EM+ K + PT+
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV 657

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S++  L +  +L+EA   F+  KS  +   V IY SL+    + G   +A  + EE
Sbjct: 658 VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEE 717

Query: 364 MVSEGLKPST 373
           ++ +GL P++
Sbjct: 718 LMQKGLTPNS 727



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 170/377 (45%), Gaps = 3/377 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + +  F  +  ++ TLI  ++ ++R D +  ++  M E     N     TL+ 
Sbjct: 187 AFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVR 246

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              + G++   + +LD +     +  +++    I    +  +++        M  + ++ 
Sbjct: 247 VFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVP 306

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           D + Y+ ++    K R L+ A+ ++EE+ L R      + Y T I  Y   GK +EA  L
Sbjct: 307 DDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPC-VYAYNTMIMGYGSAGKFDEAYSL 365

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++  +  G  P    +N ++    +  ++EE+L   ++M  +   P+ + +N +I  LC+
Sbjct: 366 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCK 424

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  + A  +     + G  PN +T + +I    K  ++ E   ++  +++K  SP    
Sbjct: 425 AGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRT 484

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           + SLI  L + G++++A   ++ M     +P V +Y SL+    + G K     + +EMV
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMV 544

Query: 366 SEGLKPSTSYLCSASTC 382
             G  P    L S   C
Sbjct: 545 HRGCSPDLMLLNSYMDC 561



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 159/335 (47%), Gaps = 4/335 (1%)

Query: 6   VAFDVCRYLEQRGFSLSLIS-FNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRT 63
           VAF   R++E++         +N  + V+ ++   D + +I + M +      N  ++  
Sbjct: 115 VAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVE- 173

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+++  K  +L+    +++ +   +  P     T+LI  +    R +  + L  +M    
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +   ++ +V    +   +++AL + +EM    F+A+  +Y   I  + + GK++ A 
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
               EM+  GL P D T+  LI    KA+R++E++   E++   + +P   A+N MI   
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G   +A  +L     KG  P+ I Y+ ++    ++G+++E L+++ EM  +  +P L
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNL 412

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
             Y  LI  LC+ G+LE A K    MK   L P +
Sbjct: 413 TTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNI 447



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 145/309 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G    + S++ LIH + K+  +   ++++  M E   + +     T+I   CK G+
Sbjct: 578 IKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGK 637

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L+ +  K   P V+   S++  + + +R++E  +L +      +  + + YS 
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSS 697

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++ A ++ EE++++G + NS+ +   + A  +  +I+EA    Q M+N  
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T++++I G    ++  ++  + ++M  + L P+   +  MI  L + GN  +A 
Sbjct: 758 CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEAR 817

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           G+       G  P+   Y+ +I G +   +  +   ++ E   K           L+ +L
Sbjct: 818 GLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL 877

Query: 314 CQCGKLEEA 322
            +   LE+A
Sbjct: 878 HKADCLEQA 886



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 111/254 (43%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+  +    + RNL+    + EEM   GF  ++ V    + ++ +  K++EA  +++ M 
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
               +P    +  LI   + A R +  L+   QM       +   F  ++R     G   
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +L       F+ + + Y+  I  + K G++    K ++EM+ + + P    YT+LI
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             LC+  +L+EA + F+ +  +  VP V  Y +++  +   G   +A  L E    +G  
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375

Query: 371 PSTSYLCSASTCRG 384
           PS        TC G
Sbjct: 376 PSVIAYNCILTCLG 389


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 171/364 (46%), Gaps = 17/364 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  GF  S+  FN+ I  +  + ++  V  I   M      PN  T   LI+  CK G 
Sbjct: 506 MENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGN 565

Query: 74  LQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           L      Y +M++    K   P + + + L+    +E +++E  ++L+++   +MI D  
Sbjct: 566 LHDACILYFEMVE----KGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCS 621

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           A +L         N+     + E +      +   ++   I   C+ G++ +A  L +++
Sbjct: 622 ASTL---------NIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDL 672

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           +  G  P + T++ LI GC+ +  I+ +    ++M+S +L P+   +N +I  LC+  N 
Sbjct: 673 KVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNV 732

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +      KG SPN ITY+ LI G+ K+G   E  KL  +M  + I PT+  YT L
Sbjct: 733 SRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTIL 792

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC  G +EEA K    M  +++ P    Y +L+  +   GN      L  EM   GL
Sbjct: 793 IHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGL 852

Query: 370 KPST 373
            P+ 
Sbjct: 853 LPAN 856



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 153/317 (48%), Gaps = 1/317 (0%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N      ++   C+ GQ +    +L  +  K  SP V+  T L+    +E R+EE   ++
Sbjct: 198 NLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVV 257

Query: 117 KRML-RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           K +   + ++ D +AY  ++    +   +E A  V +EM+  G   N FVY T I  YC+
Sbjct: 258 KEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCK 317

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++ E   L+Q  E  G+   + ++N L++G  +   + ++   C+ M+      +   
Sbjct: 318 LGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLT 377

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++   C  G    A  +  L L +G  PNEI+ S L+ G+ K G+ ++ L L+ E  
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL 437

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + ++  +    ++I+ LC+  ++ EA++ F  MK  S       Y +L+  + + G+  
Sbjct: 438 ARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG 497

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  +  EM + G  PS
Sbjct: 498 RATQIRIEMENLGFVPS 514



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 179/427 (41%), Gaps = 61/427 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+ C  + + GF+ + +++NTL++        D   +++  ML+    PNE +  TL+ 
Sbjct: 359 AFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLD 418

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G+ +  +++      +  +  V+   ++I  + +  R+ E   L  RM   +   
Sbjct: 419 GFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPC 478

Query: 127 DTIAYSLIVYA-------------KVKMRNL--------------------ESALV--VY 151
           D++ Y  ++               +++M NL                    +S  V  + 
Sbjct: 479 DSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIR 538

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM  +G S N+  Y   I  +C+ G + +A  L  EM   GLKP     ++L+    + 
Sbjct: 539 VEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYRE 598

Query: 212 KRIEESLSYCEQMMSRKLLPSCSA--------------------------FNEMIRRLCE 245
            +++E+    +++    ++  CSA                          +N +I  LC+
Sbjct: 599 GKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCK 658

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G    A  +      KGF P+  TYS LI G +  G I     L  EM    ++P +  
Sbjct: 659 LGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVT 718

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y SLI  LC+   +  A   F  ++S  + P    Y +L+  H + GN  +A  L ++M+
Sbjct: 719 YNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI 778

Query: 366 SEGLKPS 372
            EG++P+
Sbjct: 779 KEGIQPT 785



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 173/375 (46%), Gaps = 2/375 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRT 63
           EVA  +   L+ +G S +++++  L+    K  R +   ++ + + EN +   +E     
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  C+ G+++    + D +        + V  ++I    +  R+ E   LL+    + 
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D  +Y+ +V    +   +  A    + M++ GF+  +  Y T +  +C  G I++A 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M   G+ P + + + L++G  KA + E++L+  ++ ++R L  +    N +I  L
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A  +     +     + +TY  LI GY K G++    ++  EME     P++
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             + S I+ L    +  + +     M +  L P    Y +L+    ++GN   A  L  E
Sbjct: 516 EMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575

Query: 364 MVSEGLKPSTSYLCS 378
           MV +GLKP+  ++CS
Sbjct: 576 MVEKGLKPNL-FICS 589



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 136/306 (44%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  +++  +NT+I+   K  R   V ++ Q         +E +  TL+   C+ G +   
Sbjct: 300 GVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKA 359

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            +  D +     +   +   +L+        I++ + L   ML++ ++ + I+ S ++  
Sbjct: 360 FETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDG 419

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K    E AL +++E L RG + N     T I   C+  ++ EA  L   M+       
Sbjct: 420 FFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCD 479

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  K   +  +     +M +   +PS   FN  I  L     + + N +  
Sbjct: 480 SLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRV 539

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG SPN +TY  LI G+ KEG + +   LY+EM  K + P L   + L+S   + G
Sbjct: 540 EMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREG 599

Query: 318 KLEEAD 323
           K++EA+
Sbjct: 600 KVDEAN 605



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 3/213 (1%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           FSA SF     + A+ + G++++A  +  EM  AG +    + N L+    +A  I  ++
Sbjct: 92  FSAASF--DLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAV 149

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           +  +QM     LP       M +  C  G    A   L    + G   N + Y  ++ GY
Sbjct: 150 AVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGY 209

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK-IMKSHSLVPG 337
            + G+ +   KL + ++ K +SP +  YT L+   C+ G++EEA+K  K I ++  +V  
Sbjct: 210 CRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVID 269

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              Y +L+  + ++G    A  + +EM+  G++
Sbjct: 270 EVAYGALINGYCQRGRMEDANRVRDEMIDAGVQ 302



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 85/187 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+ +GF     ++++LIH  + S   DL + +   ML     PN  T  +LI  LCK   
Sbjct: 672 LKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCN 731

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   V + +++  K  SP  I   +LI    ++    E   L ++M+++ +      Y++
Sbjct: 732 VSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTI 791

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++       +E A+ + ++M++     N   Y T I  Y   G ++    L  EM   G
Sbjct: 792 LIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICG 851

Query: 194 LKPYDET 200
           L P + T
Sbjct: 852 LLPANWT 858


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 172/383 (44%), Gaps = 21/383 (5%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF L  +S+ TLIH + K         + Q +   +   N     T+I  +CK   +   
Sbjct: 155 GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 214

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+   +  K  SP V+  ++LI       ++++ + L  +++ +N+  D   ++++V  
Sbjct: 215 FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 274

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R ++    V+  M+K+G   +   Y + +  YC   ++  A  +   M   G+ P 
Sbjct: 275 FCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPD 334

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N+LI G  K K+++++++   +M  + ++P+   +N +I  L + G    A  ++ 
Sbjct: 335 IRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVD 394

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC- 316
              D+G  PN +TY+ +I    K  ++ + + L  + + + I P++  YT LI  LC+  
Sbjct: 395 QMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE 454

Query: 317 -------------------GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
                              G  +EA      MK  S +P    YE  +   L+     KA
Sbjct: 455 GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKA 514

Query: 358 LHLCEEMVSEG-LKPSTSYLCSA 379
             L  EM++ G L  S SY CS+
Sbjct: 515 EKLFREMITRGLLNRSASYPCSS 537



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 128/270 (47%), Gaps = 8/270 (2%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ + L  R+LR+N       ++ I+ + VK ++  + L + ++M  RG   N F    
Sbjct: 67  VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 169 FIGAYCEYG----KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            I  +C+ G    +I +A     ++   G      ++  LI G  K      +L   +++
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
             + +  +   +N +I  +C+  +   A  + +  + KG SPN +TYS LI G+   G++
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 246

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           ++ + L+ ++  ++I P    +  L+   C+  K++E    F +M    ++P V  Y SL
Sbjct: 247 KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSL 306

Query: 345 VGIH--LEKGNKAKALHLCEEMVSEGLKPS 372
           +  +  +++ N AK++     M   G+ P 
Sbjct: 307 MDGYCLVKEVNTAKSIF--NTMAQGGVNPD 334



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 104/229 (45%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A + +++++  GF  +   Y T I   C+ G+   A  L+Q ++   ++     +N 
Sbjct: 141 IHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNT 200

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I G  K K + ++     +M+S+ + P+   ++ +I      G  K A  +    + + 
Sbjct: 201 VIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILEN 260

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+  T++ L+ G+ K+ +++E   ++  M  + I P +  Y SL+   C   ++  A 
Sbjct: 261 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAK 320

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F  M    + P +  Y  L+    +     KA++L  EM  + + P+
Sbjct: 321 SIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPN 369



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 4/215 (1%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           N   Y++    +     +++A  L   +      P    FN ++    K+K     LS  
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK----GFSPNEITYSHLIGG 277
           ++M  R + P+    N +I   C+ G          L  DK    GF  ++++Y  LI G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             K GE +  L L   ++ K +      Y ++I  +C+   + +A   +  M S  + P 
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           V  Y +L+      G    A+ L  +++ E +KP 
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPD 264


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 167/359 (46%), Gaps = 5/359 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   ++ ++N L+  + K+DR D   +++  M      P+  T  T++S+LCK G+
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    ++  R       P V V  +LI  + +E RIE  + LL  M+   +  + ++YS 
Sbjct: 230 IDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +     N+E A  ++ +M  RG  AN   +T  I      GK+ EA  L + M   G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P    +N LI G      +EE+L  C+QM     LP+ + ++ +I    + G+   A+
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 +  G  PN +TY+ ++    K     +   L  +M  +  +P    + + I  L
Sbjct: 405 ETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGL 464

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G++E A K  + M+ H  +P +  Y  L+          +A  L +E+ +  L+P+
Sbjct: 465 CGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 164/362 (45%), Gaps = 8/362 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
            F  +  ++  +I  + +    D+V  I Q M  +     E     +I+   + G  +  
Sbjct: 69  AFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQA 128

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + M  RI    C P V +   L+  ++ E + +    L   M +  +I +   Y++++ A
Sbjct: 129 LKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKA 188

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-LKP 196
             K   +++A  ++ EM  +G   ++  YTT + + C+ GKI++A       E AG  KP
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR------ELAGRFKP 242

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +N LI+G  K  RIE ++    +MM   + P+  +++ +I  LC  GN + A  + 
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G   N  T++ LI G    G++ E L L+  M      P + AY +LI  LC  
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 362

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
           G LEEA +    M+    +P V  Y  L+    + G+   A      M+S G +P+  +Y
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 376 LC 377
            C
Sbjct: 423 TC 424



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 170/369 (46%), Gaps = 1/369 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           EVA  +   +   G   +++S++ +I+ +  S   +L + ++  M       N  T   L
Sbjct: 261 EVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPL 320

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I      G+L   +D+   +    C P V+   +LI  +     +EE + +  +M R   
Sbjct: 321 IKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGC 380

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + +   YS+++    K  +L  A   +  M+  G   N   YT  +   C+    ++AN 
Sbjct: 381 LPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANS 440

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+++M   G  P   TFN  I+G     R+E ++   E+M     LP+ + +NE++  L 
Sbjct: 441 LVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALF 500

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                ++A G+      +   PN +TY+ ++ G+++ G + E L+L+ +   +  +P   
Sbjct: 501 RMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSI 560

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKS-HSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            Y ++I + C+ GK++ A +  + + S     P +  Y SL+       N  +A+   ++
Sbjct: 561 TYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDK 620

Query: 364 MVSEGLKPS 372
            +++G+ P+
Sbjct: 621 AINQGICPN 629



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 163/365 (44%), Gaps = 1/365 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF +   +  RG   ++ +F  LI       +      +++ M+++   PN     TL
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G L+  + + D++    C P V   + LI    +   +        RM+    
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ +V    K    + A  + E+M   G + N+  + TFI   C  G++E A  
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++ M+  G  P   T+N L++   +  + EE+    +++ +R L P+   +N ++    
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-YKSISPTL 303
             G   +A  +   AL +G +P+ ITY+ +I  Y K+G+++   +L   +   K   P +
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YTSLI   C    +EEA  +     +  + P    + +LV    +       +H+ ++
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDD 655

Query: 364 MVSEG 368
           ++ +G
Sbjct: 656 ILRKG 660



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 159/358 (44%), Gaps = 1/358 (0%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R L  R F  S+  +N LI  + K  R ++  ++   M++N   PN  +   +I++L
Sbjct: 231 DDARELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C  G ++    +  ++  + C   +   T LI       ++ E + L K M++     + 
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           +AY+ +++      +LE AL V ++M + G   N   Y+  I  + + G +  A+     
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M + G +P   T+  +++   K    +++ S  E+M      P+   FN  I+ LC  G 
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR 469

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +L      G  PN  TY+ L+    +  + +E   L+ E+E +++ P L  Y +
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           ++    + G + EA + F         P    Y +++  + ++G    A  L E + S
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 13/241 (5%)

Query: 142 RNLESALVVYEEMLK-RGFSANSFVYTTFI---GAYCEYGKIEEANCLMQEMENAGLKPY 197
           RNL S L  +  +     F   +  Y   I   G  CE   ++    ++Q+M+  G+   
Sbjct: 52  RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQY---ILQQMKMDGINCC 108

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           ++ F  +I G  +    E++L    ++      P+   +N ++  L      +  N + T
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  PN  TY+ L+    K   +    KL+ EM  K   P    YT+++SSLC+ G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYL 376
           K+++A +     K     P V +Y +L+    ++G    A+ L  EM+  G+ P+  SY 
Sbjct: 229 KIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 377 C 377
           C
Sbjct: 284 C 284



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/204 (20%), Positives = 91/204 (44%), Gaps = 1/204 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +F+ A  +   +   G + + ++FNT I  +  + R +   ++ + M  +   PN  T  
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYN 493

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+ AL +  + +    +   I  +   P ++   +++    +   + E + L  + L +
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVR 553

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEE 181
               D+I Y+ +++A  K   ++ A  + E +   + +  +   YT+ I   C +  IEE
Sbjct: 554 GTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEE 613

Query: 182 ANCLMQEMENAGLKPYDETFNLLI 205
           A   + +  N G+ P   T+N L+
Sbjct: 614 AMAFLDKAINQGICPNFATWNALV 637



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 1/159 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  +E AF + + +E R    +L+++NT+++  +++       +++   L     P+  T
Sbjct: 502 MNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHG-KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
             T+I A CK G+++    +++R+   K   P +I  TSLI        IEE M  L + 
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKA 621

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           + + +  +   ++ +V            + + +++L++G
Sbjct: 622 INQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 173/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G   ++ +FNTLI  +    +   V  ++  M+     PN  T  TLI+
Sbjct: 113 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLIN 172

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G     + +L  +    C P V+V TS+I  + ++ ++ +   L   M+ + +  
Sbjct: 173 GLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 232

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ +++A   +   +    +  EM+      N  +++T + A C+ GK+ EA+ ++
Sbjct: 233 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 292

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G++P   T+N L++G      ++E++   + M+ +   P   +++ +I   C+ 
Sbjct: 293 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 352

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A  +      K   PN +TYS L+ G    G +Q+ + L++EM  +   P   +Y
Sbjct: 353 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+  LC+  +L+EA    K ++  ++ P + IY  ++      G    A  L   + S
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 472

Query: 367 EGLKPS 372
           +GL P+
Sbjct: 473 KGLHPN 478



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 160/336 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +     +   ++  G   ++ + N LI+      R    + +   +L+    PN AT
Sbjct: 72  MKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 131

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC  G++   + + D++ G+   P V+   +LI  + +       + LL+ M 
Sbjct: 132 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 191

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           + N   D + Y+ I+ +  K R +  A  ++ EM+ +G S + F Y + I A C   + +
Sbjct: 192 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 251

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
               L+ EM N+ + P    F+ +++   K  ++ E+    + M+ R + P+   +N ++
Sbjct: 252 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 311

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C      +A  +    + KGF+P+ ++YS LI GY K   I++ + L+ EM  K + 
Sbjct: 312 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 371

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           P    Y++L+  LC  G+L++A   F  M +   +P
Sbjct: 372 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP 407



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 175/368 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +EQ      ++ + ++I  + K  +    + ++  M+     P+  T  +LI 
Sbjct: 183 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 242

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC   + +    +L+ +   +  P V++ ++++  + +E ++ E   ++  M+++ +  
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++        ++ A+ V++ M+ +GF+ +   Y+T I  YC+  +IE+A  L 
Sbjct: 303 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 362

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    L P   T++ L+ G     R++++++   +M++R  +P   ++  ++  LC+ 
Sbjct: 363 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 422

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +L         P+   Y+ +I G  + GE++    L+  +  K + P +  Y
Sbjct: 423 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 482

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +I+ LCQ G L EA K F  MK     P    Y  +    L      + + L +EM++
Sbjct: 483 TIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLA 542

Query: 367 EGLKPSTS 374
            G     S
Sbjct: 543 RGFSADVS 550



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 166/356 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+  F  L+  +TK      V  +   M      PN  T+  LI++ C   +L     +L
Sbjct: 58  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVL 117

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P +    +LI  +  E +I E + L  +M+ +    + + Y  ++    K+
Sbjct: 118 AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKV 177

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +  +A+ +   M +     +  VYT+ I + C+  ++ +A  L  EM + G+ P   T+
Sbjct: 178 GSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTY 237

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI         +   +   +M++ K++P+   F+ ++  LC+ G   +A+ ++ + + 
Sbjct: 238 NSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK 297

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  PN +TY+ L+ G+    E+ E +K++  M  K  +P + +Y++LI+  C+  ++E+
Sbjct: 298 RGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEK 357

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           A   F+ M    L+P    Y +L+      G    A+ L  EMV+ G  P     C
Sbjct: 358 AMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYC 413



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 158/346 (45%), Gaps = 35/346 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G S S+ ++N+LIH +        V  +   M+ +   PN     T++ 
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277

Query: 67  ALCKGGQL---QTYVDML--------------------------------DRIHGKRCSP 91
           ALCK G++      VDM+                                D +  K  +P
Sbjct: 278 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 337

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
            V+  ++LI    + +RIE+ M L + M RK +I +T+ YS +++    +  L+ A+ ++
Sbjct: 338 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 397

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM+ RG   +   Y   +   C+  +++EA  L++ +E + + P  + + ++I+G  +A
Sbjct: 398 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 457

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             +E +      + S+ L P+   +  MI  LC+ G   +A+ +      KG+SPN  TY
Sbjct: 458 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 517

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + +  G+ +  E    ++L  EM  +  S  +   T L+  L   G
Sbjct: 518 NLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 150/350 (42%), Gaps = 10/350 (2%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FNTL   ++  +R          ML     P+ A    L+ ++ K     T + +  +
Sbjct: 35  LNFNTLDDALSSFNR----------MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQ 84

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P +     LI      +R+     +L ++L+     +   ++ ++        
Sbjct: 85  MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +   L ++++M+  GF  N   Y T I   C+ G    A  L++ ME    +P    +  
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+   K +++ ++ +   +M+ + + PS   +N +I  LC     K    +L   ++  
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN + +S ++    KEG++ E   +   M  + + P +  Y +L+   C   +++EA 
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 324

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K F  M      P V  Y +L+  + +     KA++L EEM  + L P+T
Sbjct: 325 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 374



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 90/207 (43%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + TF      +  +++A      M +    P    F  L+    K K     LS   QM 
Sbjct: 27  HNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMD 86

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           S  + P+    N +I   C       A  +L   L  G  PN  T++ LI G   EG+I 
Sbjct: 87  SFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIG 146

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           EVL L+ +M  +   P +  Y +LI+ LC+ G    A +  + M+  +  P V +Y S++
Sbjct: 147 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSII 206

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               +     +A +L  EM+ +G+ PS
Sbjct: 207 DSLCKDRQVTQAFNLFSEMIHQGISPS 233


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 159/328 (48%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +    LE   YP+  T   LI A C    +   + +LD +  + C P V+    L+  + 
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +E R++E +  L  M       + I +++I+ +         A  +  EM+++G S +  
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            +   I   C  G +  A  ++++M   G  P   ++N L+ G  K K+++ ++ Y E M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +SR   P    +N M+  LC+ G    A  +L     KG SP  ITY+ +I G +K G+ 
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            + ++L +EM  K + P +  Y+SLI+ L + GK+EEA K+F  ++   + P    Y S+
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +    +     +A+     M+S+G KP+
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMISKGCKPT 330



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 163/363 (44%), Gaps = 1/363 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R LE+  +   +I++  LI             ++   M      P+  T   L++ +CK 
Sbjct: 6   RQLEKECYP-DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKE 64

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+L   +  L+ +      P VI +  ++  +    R  +   LL  M+RK      + +
Sbjct: 65  GRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTF 124

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++    +   L  A+ + E+M   G + NS  Y   +  +C+  K++ A   ++ M +
Sbjct: 125 NILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVS 184

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G  P   T+N ++    K  +++ ++    Q+ S+   P    +N +I  L + G   Q
Sbjct: 185 RGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQ 244

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L     KG  P+ ITYS LI G ++EG+++E +K ++++E   + P    Y S++ 
Sbjct: 245 AVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMF 304

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+  + + A  +   M S    P    Y  L+     +G   +AL L  E+ S G+  
Sbjct: 305 GLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVK 364

Query: 372 STS 374
            +S
Sbjct: 365 KSS 367



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 120/235 (51%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +   G + + +S+N L+H   K  + D   +  + M+    YP+  T  T+++
Sbjct: 140 AIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLT 199

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G++   V++L+++  K CSP++I   ++I  + +  + ++ + LL  M  K +  
Sbjct: 200 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKP 259

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS ++    +   +E A+  + ++   G   N+F Y + +   C+  + + A   +
Sbjct: 260 DVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFL 319

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
             M + G KP + ++ +LIEG A     +E+L    ++ SR ++   SA   ++R
Sbjct: 320 AYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 67/152 (44%)

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++ + ++  P    +  +I   C      QA  +L     +G  P+ +TY+ L+ G  KE
Sbjct: 5   DRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKE 64

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E +K    M      P +  +  ++ S+C  G+  +A+K    M      P V  +
Sbjct: 65  GRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTF 124

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     KG   +A+ + E+M + G  P++
Sbjct: 125 NILINFLCRKGLLGRAIDILEKMPTHGCTPNS 156



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/159 (19%), Positives = 69/159 (43%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A ++   L  +G S  LI++NT+I  ++K  + D    +   M      P+  T  +L
Sbjct: 208 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSL 267

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ L + G+++  +     + G    P      S++  + + ++ +  +  L  M+ K  
Sbjct: 268 IAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGC 327

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
               ++Y++++         + AL +  E+  RG    S
Sbjct: 328 KPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKS 366


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 19/348 (5%)

Query: 26  FNTLI-HVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           FNT++  ++ ++ R + V  I   M+     PN+  +   +  LCKGG+ Q  V +  + 
Sbjct: 189 FNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 248

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K                   + ++E   +++ ML K +  D+I Y++++    K   +
Sbjct: 249 LNK------------------GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 290

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A+ ++ +M +RGF  + F + T + AYC  GK+EE   L+ +M+  GL+P   ++  +
Sbjct: 291 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 350

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  KAK I ++  Y  ++M R L P+   +N +I      G+   A   +      G 
Sbjct: 351 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 410

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  +TY  L+      G ++E   ++ +    ++   +  YT +I   C+ GK+ EA  
Sbjct: 411 QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVA 470

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           YF+ M+S  + P    Y +L+  + + GN  +A  L +EMV  G+ P 
Sbjct: 471 YFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPD 518



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 187/421 (44%), Gaps = 53/421 (12%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF +   +EQ G + S+++F  LI+ + + +R   V  + Q M +    PNE     L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C+ G     + + D +  K+  P  +    +   + +E  +E    +L+ ML   M
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 125 -IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK----- 178
            +H  +  +++ +   + R LES + +  EM+ RG   N  + T  +   C+ GK     
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 242

Query: 179 ------------IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL-------- 218
                       ++EA  ++Q M N G++    T+N++I GC K  ++EE++        
Sbjct: 243 GIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 302

Query: 219 ---------------SYC------------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
                          +YC            +QM +  L P   ++  +I   C+  + ++
Sbjct: 303 RGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRK 362

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A   LT  +D+G  PN   Y+ LIGGY + G+I   +     M+   I PT   Y SL+ 
Sbjct: 363 AKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMY 422

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            +C  G +EEA   F   + +++  GV  Y  ++  + + G   +A+   EEM S G+ P
Sbjct: 423 WMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISP 482

Query: 372 S 372
           +
Sbjct: 483 N 483



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 178/376 (47%), Gaps = 18/376 (4%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           E R  +L+  S+  +I  + K+ + D  + +   +      P   T   L+ ALCK G++
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +    +  R+     +P V+    LI  + + ER  E  ++L+ M +  +  + + Y+ +
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    +  +   AL +++EM+ +     +  Y     A C+ G++E A  ++++M + G+
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 195 KPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             +   FN ++     + +R+E  +S   +M++R + P+       +R LC+ G  ++A 
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 242

Query: 254 GM-----------------LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           G+                 +   L+KG   + ITY+ +I G  K+ +++E +KL+ +M  
Sbjct: 243 GIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 302

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           +   P L  + +L+ + C  GK+EE       MK+  L P +  Y +++  H +  +  K
Sbjct: 303 RGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRK 362

Query: 357 ALHLCEEMVSEGLKPS 372
           A     E++  GLKP+
Sbjct: 363 AKEYLTELMDRGLKPN 378



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 128/311 (41%), Gaps = 35/311 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V + +  +G  L  I++N +I    K  + +   +++  M      P+  T  TL+ 
Sbjct: 258 ATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLH 317

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C  G+++    +LD++  +   P                                   
Sbjct: 318 AYCNLGKMEETFHLLDQMKTEGLQP----------------------------------- 342

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y  I+    K +++  A     E++ RG   N F+Y   IG Y   G I  A   +
Sbjct: 343 DIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAV 402

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M++ G++P + T+  L+     A  +EE+ +   Q     +      +  MI+  C+ 
Sbjct: 403 ETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKL 462

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A         +G SPN++TY+ L+  Y+K G  +E  KL+ EM    + P    Y
Sbjct: 463 GKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITY 522

Query: 307 TSLISSLCQCG 317
            +LI+   + G
Sbjct: 523 GTLIARCSEKG 533



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 2/160 (1%)

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           SR +  +  ++  MI+ LC+ G       ML      G  P  +TY+ L+    K G ++
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVE 63

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E  +L   ME   ++P++  +  LI+ L +  +  E     + M+   + P   IY  L+
Sbjct: 64  EAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS--TSYLCSASTCR 383
           G H  KG+ ++AL L +EMV + +KP+  T  L + + C+
Sbjct: 124 GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK 163


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 165/348 (47%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N +I  + +S +     +++  M++    PN  T  T+I    KGG L+    + D++
Sbjct: 18  SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM 77

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P ++    L+  + +  R++E  VL+  M   +M  D   YS++     +    
Sbjct: 78  LHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 137

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            + L ++ E LK+G    ++  +  +   C+ GK+ +A  +++ + + GL P    +N L
Sbjct: 138 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 197

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  + + +  +    EQM SR + P    +N +I  LC+     +A  ++      G 
Sbjct: 198 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 257

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  T++ LI  Y   G++++   +  +M+ K I   + ++ S++ + C+ GK+ EA  
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               M    + P   +Y S++  ++E G+  +A  L E+M + G+  S
Sbjct: 318 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 365



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 175/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F +   +   G   +++++N L+  + ++ R D    +   M  +  +P+  T   
Sbjct: 67  LEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSI 126

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L   L + G+ +T + +      K         + L+  + ++ ++ +   +L+ ++   
Sbjct: 127 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 186

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++  T+ Y+ ++    ++R+L  A  ++E+M  R    +   Y   I   C+   + +A 
Sbjct: 187 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 246

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EME +G+ P  ETFN LI+    A ++E+  +    M  + +     +F  +++  
Sbjct: 247 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 306

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +L   + K  +PN   Y+ +I  Y + G+ ++   L  +M+   +S ++
Sbjct: 307 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 366

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  L+  LC+  +++EA++    +++  L P V  Y +++     KG+  KAL L +E
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426

Query: 364 MVSEGLKPS 372
           M   G++P+
Sbjct: 427 MNKYGIRPT 435



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 165/354 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G  L   + + L++ + K  +     ++ + ++     P      TLI+  C+   L+
Sbjct: 149 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 208

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + +++  +   P  I   +LI  + + E + +   L+  M +  +      ++ ++
Sbjct: 209 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 268

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A      LE    V  +M ++G  ++   + + + A+C+ GKI EA  ++ +M    + 
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 328

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  + +N +I+   ++   E++    E+M +  +  S   +N +++ LC      +A  +
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 388

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    ++G  P+ ++Y+ +I     +G+  + L+L  EM    I PTL  Y +L+S+L  
Sbjct: 389 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALAS 448

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            G++ + +  ++ M   ++ P   IY  +V  ++   N +K   L +EM  +G+
Sbjct: 449 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 113/246 (45%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  +Y++++    +      AL V++EM+  G   N   Y T I  + + G +E    L 
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M + G KP   T+N+L+ G  +A R++E+    ++M S  + P    ++ +   L   
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G ++    +   +L KG      T S L+ G  K+G++ +  ++   + +  + PT   Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +LI+  CQ   L  A   F+ MKS  + P    Y +L+    +     KA  L  EM  
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 367 EGLKPS 372
            G+ PS
Sbjct: 255 SGVDPS 260



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 12/306 (3%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIH------VVTKSDRNDLVWRIYQHMLENIR 54
           +R    AF +   ++ R      I++N LI+      +VTK++  DLV  + +  ++   
Sbjct: 204 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE--DLVMEMEKSGVD--- 258

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
            P+  T  TLI A    GQL+    +L  +  K     VI   S++    +  +I E + 
Sbjct: 259 -PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           +L  M+ K++  +   Y+ I+ A ++  + E A ++ E+M   G SA+   Y   +   C
Sbjct: 318 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 377

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
              +I+EA  L+  + N GL+P   ++N +I  C      +++L   ++M    + P+  
Sbjct: 378 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 437

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            ++ ++  L   G       +    L K   P+   Y  ++  Y +     +V  L  EM
Sbjct: 438 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 497

Query: 295 EYKSIS 300
             K I+
Sbjct: 498 SEKGIA 503


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 167/359 (46%), Gaps = 5/359 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   ++ ++N L+  + K+DR D   +++  M      P+  T  T++S+LCK G+
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    ++  R       P V V  +LI  + +E RIE  + LL  M+   +  + ++YS 
Sbjct: 230 IDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +     N+E A  ++ +M  RG  AN   +T  I      GK+ EA  L + M   G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P    +N LI G      +EE+L  C+QM     LP+ + ++ +I    + G+   A+
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 +  G  PN +TY+ ++    K     +   L  +M  +  +P    + + I  L
Sbjct: 405 ETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGL 464

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G++E A K  + M+ H  +P +  Y  L+          +A  L +E+ +  L+P+
Sbjct: 465 CGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 164/362 (45%), Gaps = 8/362 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
            F  +  ++  +I  + +    D+V  I Q M  +     E     +I+   + G  +  
Sbjct: 69  AFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQA 128

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + M  RI    C P V +   L+  ++ E + +    L   M +  +I +   Y++++ A
Sbjct: 129 LKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKA 188

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-LKP 196
             K   +++A  ++ EM  +G   ++  YTT + + C+ GKI++A       E AG  KP
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR------ELAGRFKP 242

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +N LI+G  K  RIE ++    +MM   + P+  +++ +I  LC  GN + A  + 
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G   N  T++ LI G    G++ E L L+  M      P + AY +LI  LC  
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSN 362

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
           G LEEA +    M+    +P V  Y  L+    + G+   A      M+S G +P+  +Y
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 376 LC 377
            C
Sbjct: 423 TC 424



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 170/369 (46%), Gaps = 1/369 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           EVA  +   +   G   +++S++ +I+ +  S   +L + ++  M       N  T   L
Sbjct: 261 EVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPL 320

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I      G+L   +D+   +    C P V+   +LI  +     +EE + +  +M R   
Sbjct: 321 IKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGC 380

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + +   YS+++    K  +L  A   +  M+  G   N   YT  +   C+    ++AN 
Sbjct: 381 LPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANS 440

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+++M   G  P   TFN  I+G     R+E ++   E+M     LP+ + +NE++  L 
Sbjct: 441 LVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALF 500

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                ++A G+      +   PN +TY+ ++ G+++ G + E L+L+ +   +  +P   
Sbjct: 501 RMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSI 560

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKS-HSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            Y ++I + C+ GK++ A +  + + S     P +  Y SL+       N  +A+   ++
Sbjct: 561 TYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDK 620

Query: 364 MVSEGLKPS 372
            +++G+ P+
Sbjct: 621 AINQGICPN 629



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 163/365 (44%), Gaps = 1/365 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF +   +  RG   ++ +F  LI       +      +++ M+++   PN     TL
Sbjct: 296 ELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTL 355

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G L+  + + D++    C P V   + LI    +   +        RM+    
Sbjct: 356 IHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGC 415

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ +V    K    + A  + E+M   G + N+  + TFI   C  G++E A  
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++ M+  G  P   T+N L++   +  + EE+    +++ +R L P+   +N ++    
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-YKSISPTL 303
             G   +A  +   AL +G +P+ ITY+ +I  Y K+G+++   +L   +   K   P +
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YTSLI   C    +EEA  +     +  + P    + +LV    +       +H+ ++
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDD 655

Query: 364 MVSEG 368
           ++ +G
Sbjct: 656 ILRKG 660



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/358 (22%), Positives = 159/358 (44%), Gaps = 1/358 (0%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R L  R F  S+  +N LI  + K  R ++  ++   M++N   PN  +   +I++L
Sbjct: 231 DDARELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C  G ++    +  ++  + C   +   T LI       ++ E + L K M++     + 
Sbjct: 290 CVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNV 349

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           +AY+ +++      +LE AL V ++M + G   N   Y+  I  + + G +  A+     
Sbjct: 350 VAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNR 409

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M + G +P   T+  +++   K    +++ S  E+M      P+   FN  I+ LC  G 
Sbjct: 410 MISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR 469

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +L      G  PN  TY+ L+    +  + +E   L+ E+E +++ P L  Y +
Sbjct: 470 VEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNT 529

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           ++    + G + EA + F         P    Y +++  + ++G    A  L E + S
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 13/241 (5%)

Query: 142 RNLESALVVYEEMLK-RGFSANSFVYTTFI---GAYCEYGKIEEANCLMQEMENAGLKPY 197
           RNL S L  +  +     F   +  Y   I   G  CE   ++    ++Q+M+  G+   
Sbjct: 52  RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQY---ILQQMKMDGINCC 108

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           ++ F  +I G  +    E++L    ++      P+   +N ++  L      +  N + T
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYT 168

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  PN  TY+ L+    K   +    KL+ EM  K   P    YT+++SSLC+ G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYL 376
           K+++A +     K     P V +Y +L+    ++G    A+ L  EM+  G+ P+  SY 
Sbjct: 229 KIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 377 C 377
           C
Sbjct: 284 C 284



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 1/204 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +F+ A  +   +   G + + I+FNT I  +  + R +   ++ + M  +   PN  T  
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYN 493

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+ AL +  + +    +   I  +   P ++   +++    +   + E + L  + L +
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVR 553

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEE 181
               D+I Y+ +++A  K   ++ A  + E +   + +  +   YT+ I   C +  IEE
Sbjct: 554 GTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEE 613

Query: 182 ANCLMQEMENAGLKPYDETFNLLI 205
           A   + +  N G+ P   T+N L+
Sbjct: 614 AMAFLDKAINQGICPNFATWNALV 637



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 1/159 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  +E AF + + +E R    +L+++NT+++  +++       +++   L     P+  T
Sbjct: 502 MNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHG-KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
             T+I A CK G+++    +++R+   K   P +I  TSLI        IEE M  L + 
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKA 621

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           + + +  +   ++ +V            + + +++L++G
Sbjct: 622 INQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 169/359 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E++G    L+++NTL++   +       + +   M      P   T   LI+ LCK G 
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGS 309

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +    +LD + G    P       +++   ++E + E   +   ML++ ++ D I++S 
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           IV    +   L  AL  +E+M   G   ++ +YT  I  YC    +  A  +  EM   G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
                 T+N L+ G  + K ++++    ++M+ R + P       +I   C+ GN  +A 
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 489

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      +   P+ +TY+ L+ G+ K GE+++  +L+Y+M  + I P+  +++ LI+  
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGF 549

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G + EA + +  MK   + P +    +++  +L  GN +KA      M+SEG+ P 
Sbjct: 550 CSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPD 608



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/394 (22%), Positives = 178/394 (45%), Gaps = 35/394 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L +RGF +S+ + N L+  + K    DL W++Y+  +++    N  T+  +++ALCK G+
Sbjct: 180 LRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGK 239

Query: 74  LQT-------------YVDML----------------------DRIHGKRCSPMVIVNTS 98
           L               Y D++                      D + GK   P +    +
Sbjct: 240 LDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNA 299

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI  + +E   E    +L  ML   +  +   ++ ++    +  ++  A  V+ EML+RG
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRG 359

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              +   +++ +G +   G++  A    ++M+  GL P    + +LI G  +   +  +L
Sbjct: 360 VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGAL 419

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
               +M+ R  +     +N ++  LC       A+ +    +++G  P+  T + LI GY
Sbjct: 420 KMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGY 479

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K+G + + L L+  M  +S+ P +  Y +L+   C+ G++E+A + +  M S  + P  
Sbjct: 480 CKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSY 539

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +  L+      G  ++A  L +EM  +G+KP+
Sbjct: 540 ISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPT 573



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 171/389 (43%), Gaps = 41/389 (10%)

Query: 25  SFNTLIHVVTKSDRNDLVW---RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +FN ++    +S R + VW   R++  ML+    P+  +  +++    + G+L   +   
Sbjct: 331 TFNPML---VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF 387

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +++ G    P  ++ T LI    + + +   + +   M+ +  + D + Y+ ++    + 
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           + L+ A  +++EM++RG   + +  TT I  YC+ G + +A  L + M    LKP   T+
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC----------------- 244
           N L++G  K   +E++      M+SR++ PS  +F+ +I   C                 
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567

Query: 245 ------------------ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
                               GN  +AN  L   + +G  P+ ITY+ LI  + KE     
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDR 627

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L   ME + + P L  Y +++    + G+++EA+     M    + P    Y SL+ 
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            ++ K N  +A  + +EM+  G  P   +
Sbjct: 688 GYVSKDNMKEAFRVHDEMLQRGFVPDDKF 716



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 150/333 (45%), Gaps = 20/333 (6%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKR--------------------CSPMVIV 95
           PN + I TLI  L +  +L     +L RI  K                      +  V+V
Sbjct: 97  PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156

Query: 96  NTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
              LI   +Q  ++ EG    + + ++       A + ++ A VK+  ++ A  VYE+ +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           K G   N +     + A C+ GK++     + EME  G+     T+N L+    +   + 
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           E+    + M  + L P    +N +I  LC+ G+ ++A  +L   L  G  PN  T++ ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
               ++ ++ E  +++ EM  + + P L +++S++    + G+L  A  YF+ MK   LV
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           P   IY  L+  +    + + AL +  EMV  G
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 155/363 (42%), Gaps = 32/363 (8%)

Query: 39  NDLVWRIYQHMLENIR----YPNEATIRTLISALCKGGQLQTYV----DMLDRIHGKRCS 90
           + L++R+ Q+   ++R    + N     TLI  L +  + Q Y     +++  I     +
Sbjct: 41  DKLLFRLKQNDFSSLRTHLLHSNSTLTLTLIPQLLQ--KCQNYPLLLPNLIQTIASTSPN 98

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT--------------------IA 130
           P +I   +LI  ++Q +++ E   LL R++RK+ +                       + 
Sbjct: 99  PSII--ATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           + L++   V+ R L      ++ + KRGF  +       +GA  + G ++ A  + ++  
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            +G      T N+++    K  +++    Y  +M  + +      +N ++   C  G   
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A G++     KG  P   TY+ LI G  KEG  +   ++  EM    + P    +  ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+   + EA++ F  M    +VP +  + S+VG+    G   +AL   E+M   GL 
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396

Query: 371 PST 373
           P T
Sbjct: 397 PDT 399



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 35/266 (13%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++ + A ++ + + +RG      +  TLIH   K         +++ M      P+  T 
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507

Query: 62  RTLISALCKGGQLQT----YVDMLDR------------IHG------------------- 86
            TL+   CK G+++     + DM+ R            I+G                   
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           K   P ++   ++I   ++   + +    L  M+ + +  D I Y+ ++ + VK  N + 
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDR 627

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A  +   M +RG   N   Y   +G +  +G+++EA  ++ +M + G+ P   T+  LI 
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPS 232
           G      ++E+    ++M+ R  +P 
Sbjct: 688 GYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 81/174 (46%)

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           F+LLI    +A+++ E     + +  R    S +A N ++  + + G    A  +    +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G   N  T + ++    K+G++  V     EME K +   L  Y +L+++ C+ G + 
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           EA      M    L PG+  Y +L+    ++G+  +A  + +EM+  GL P+ +
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 171/363 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E R    +++ +NT+I  + K    +  + +Y  M     +P+  T  TLI 
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  GQL     +LD +  K  +P V +   LI  + +E  ++E   LL  M ++ +  
Sbjct: 194 GFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKP 253

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + YS ++     +  +++A  ++  M++ G + N + Y   I   C+  +++EA  L+
Sbjct: 254 GVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 313

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM +  + P   T+N LI+G  K+ RI  +L+   +M  R        +  ++  LC+ 
Sbjct: 314 REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 373

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N  +A  +     ++G  P   TY+ LI G  K G ++   +L+  +  K     +  Y
Sbjct: 374 QNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTY 433

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +IS LC+ G  +EA      M+ +  +P    +E ++    EK    KA  L  EM++
Sbjct: 434 TVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIA 493

Query: 367 EGL 369
           +GL
Sbjct: 494 KGL 496



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 171/361 (47%), Gaps = 8/361 (2%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF +  +S+ TL++ + K        ++ + + +    PN     T+I  LCK   +  
Sbjct: 109 QGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+   +  +   P  I  T+LI       ++     LL  M+ KN+      Y++++ 
Sbjct: 169 AYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILIN 228

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K  N++ A  +   M K G       Y+T +  YC  G+++ A  +   M   G+ P
Sbjct: 229 ALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNP 288

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N++I G  K KR++E+++   +M+ + ++P    +N +I  LC+ G    A  ++
Sbjct: 289 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 348

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G   + +TY+ L+    K   + +   L+ +M+ + I PT+  YT+LI  LC+ 
Sbjct: 349 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 408

Query: 317 GKLEEADKYFKIMKSHSLVPG--VDIYESLVGIH--LEKGNKAKALHLCEEMVSEGLKPS 372
           G+L+ A + F+    H LV G  +D++   V I    ++G   +AL +  +M   G  P+
Sbjct: 409 GRLKNAQELFQ----HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 464

Query: 373 T 373
            
Sbjct: 465 A 465



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 163/347 (46%), Gaps = 2/347 (0%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +I FN ++  + K  +      + + M ++ IR  N  T+  LI+  C  GQ+     +L
Sbjct: 10  IIEFNKILGSLAKMKQYLTAISLSKQMEVKGIR-ANFVTLNILINCFCHLGQMAFSFSVL 68

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P  I   +L+  +  +  +++ +    +++ +    D ++Y  ++    K+
Sbjct: 69  GKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKI 128

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ +   +  R    N  +Y T I   C+   + EA  L  EM+  G+ P   T+
Sbjct: 129 GETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITY 188

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI G     ++  + S  ++M+ + + P    +N +I  LC+ GN K+A  +L +   
Sbjct: 189 TTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTK 248

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  P  +TYS L+ GY   GE+Q   ++++ M    ++P + +Y  +I+ LC+C +++E
Sbjct: 249 EGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 308

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           A    + M   ++VP    Y SL+    + G    AL+L  EM   G
Sbjct: 309 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 121/245 (49%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           I ++ I+ +  KM+   +A+ + ++M  +G  AN       I  +C  G++  +  ++ +
Sbjct: 11  IEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGK 70

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           +   G +P   T N L++G      +++SL + ++++++       ++  ++  LC+ G 
Sbjct: 71  ILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGE 130

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +L +  D+   PN + Y+ +I G  K+  + E   LY EM+ + I P    YT+
Sbjct: 131 TRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTT 190

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI   C  G+L  A      M   ++ PGV IY  L+    ++GN  +A +L   M  EG
Sbjct: 191 LIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEG 250

Query: 369 LKPST 373
           +KP  
Sbjct: 251 IKPGV 255



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 173/370 (46%), Gaps = 8/370 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEAT 60
           +L   A+D+   ++ RG     I++ TLI+      +    + +   M L+NI  P    
Sbjct: 164 KLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNIN-PGVYI 222

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ALCK G ++   ++L  +  +   P V+  ++L+        ++    +   M+
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV 282

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +  +  +  +Y++++    K + ++ A+ +  EML +    ++  Y + I   C+ G+I 
Sbjct: 283 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 342

Query: 181 EANCLMQEMENAGLKPYD-ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            A  LM EM + G +P D  T+  L++   K + ++++ +   +M  R + P+   +  +
Sbjct: 343 SALNLMNEMHHRG-QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+ G  K A  +    L KG   +  TY+ +I G  KEG   E L +  +ME    
Sbjct: 402 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    +  +I SL +  + ++A+K    M +  L+  +D   + V +  E     K LH
Sbjct: 462 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLV-LDFKVADVFVQNENDKAEKLLH 520

Query: 360 LCEEMVSEGL 369
              EM+++GL
Sbjct: 521 ---EMIAKGL 527


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 167/350 (47%), Gaps = 1/350 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWR-IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           + F  LI+   KS R D     +Y  M++N   P+  T  TLI  LCK G + + VDM++
Sbjct: 345 VHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN 404

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +    C+P +I  T+L+    ++ ++EE   +L  M  K    + + Y++++ A  K  
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            +  AL +  EM  +G   + F + T I   C+  + E+A  L ++M   G+     T+N
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYN 524

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            LI    +   I+E+L     M+ R        +N +I+  C+ G  ++A G+    + K
Sbjct: 525 TLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK 584

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              P+ I+ + LI G  + G++   L+L  +M ++ ++P +  Y SLI+ LC+ G + EA
Sbjct: 585 DLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREA 644

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              F  +++  + P    Y +L+  H   G    A  L    V     P+
Sbjct: 645 FNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPN 694



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 171/358 (47%), Gaps = 5/358 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGF+ + I++  L++ + +  + D      Q +L  +  PN+     LI+   K G+L  
Sbjct: 307 RGFTPNDITYGVLMNGLCRVGKVDEA----QVLLNKVPTPNDVHFTILINGYVKSGRLDE 362

Query: 77  YVDML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               L D++    C P V    +LI  + ++  +   + ++  M       + I Y+ ++
Sbjct: 363 ANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLL 422

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   LE A  V  EM  +GF  N   Y   + A C+ GK+ +A  ++ EM + G K
Sbjct: 423 DGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCK 482

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN LI G  K  R E++L+    M+   ++ +   +N +I      G  ++A  +
Sbjct: 483 PDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKL 542

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   L +G   +EITY+ LI  + K G  ++ L L+ EM  K + P+  +   LI+ LC+
Sbjct: 543 VNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCR 602

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK+  A +  + M    L P V  Y SL+    + GN  +A +L  ++ +EG++P  
Sbjct: 603 VGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDA 660



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 163/350 (46%), Gaps = 5/350 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++ ++  ++   +   ++  ML     P   T   ++ ALC   ++     +L  +
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM 234

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C P  +V  +LI  + + +R+ E + LL+ M     + D   ++ ++Y   ++  +
Sbjct: 235 TKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRI 294

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                + + ML RGF+ N   Y   +   C  GK++EA  L+ ++      P D  F +L
Sbjct: 295 HEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTIL 350

Query: 205 IEGCAKAKRIEESLSYC-EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           I G  K+ R++E+ ++  ++M+     P    FN +I  LC+ G    A  M+      G
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG 410

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +PN ITY+ L+ G+ K+ +++E   +  EM  K     +  Y  L+ +LC+ GK+ +A 
Sbjct: 411 CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKAL 470

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                M      P +  + +L+    +   K  AL L  +M+ +G+  +T
Sbjct: 471 DMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANT 520



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 149/308 (48%), Gaps = 2/308 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G    + +FNTLIH + K         +   M  N   PN  T  TL+   CK  QL+
Sbjct: 373 KNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLE 432

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L+ +  K     ++    L+  + +  ++ + + +L  M  K    D   ++ ++
Sbjct: 433 EAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLI 492

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +   K+   E AL +Y +ML  G  AN+  Y T I A+   G I+EA  L+ +M   G  
Sbjct: 493 FGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGC- 551

Query: 196 PYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           P DE T+N LI+   K    E++L   ++M+ + L+PS  + N +I  LC  G    A  
Sbjct: 552 PLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALE 611

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L   + +G +P+ +TY+ LI G  K G I+E   L+ +++ + I P    Y +LI   C
Sbjct: 612 LLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHC 671

Query: 315 QCGKLEEA 322
           + G  ++A
Sbjct: 672 RAGMFDDA 679



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 144/307 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +   G + +LI++ TL+    K ++ +    +   M       N      L+ 
Sbjct: 399 AVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLR 458

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G++   +DML  +  K C P +    +LI  + + +R E+ + L + ML   +I 
Sbjct: 459 ALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIA 518

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T+ Y+ +++A ++   ++ AL +  +ML RG   +   Y   I A+C+ G  E+A  L 
Sbjct: 519 NTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLF 578

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM    L P + + NLLI G  +  ++  +L     M+ R L P    +N +I  LC+ 
Sbjct: 579 DEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKM 638

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN ++A  +      +G  P+ ITY+ LI  + + G   +   L       +  P    +
Sbjct: 639 GNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTW 698

Query: 307 TSLISSL 313
             L+S+ 
Sbjct: 699 YILVSNF 705



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 170/363 (46%), Gaps = 5/363 (1%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + + G   + + + TLIH ++K DR +   ++ + M      P+  T   +I  LC+ 
Sbjct: 232 RDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRL 291

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            ++     ++DR+  +  +P  I    L+  + +  +++E  VLL ++   N +H    +
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVH----F 347

Query: 132 SLIVYAKVKMRNLESA-LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++++   VK   L+ A   +Y++M+K G   + F + T I   C+ G +  A  ++ +M 
Sbjct: 348 TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P   T+  L++G  K  ++EE+     +M ++    +   +N ++R LC+ G   
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVP 467

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  ML    DKG  P+  T++ LI G  K    ++ L LY +M    +      Y +LI
Sbjct: 468 KALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLI 527

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            +  + G ++EA K    M           Y  L+    + G   KAL L +EMV + L 
Sbjct: 528 HAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLV 587

Query: 371 PST 373
           PS 
Sbjct: 588 PSN 590



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 6/229 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + R +   G   + +++NTLIH   +        ++   ML      +E T   L
Sbjct: 502 EDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGL 561

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A CK G  +  + + D +  K   P  I    LI  + +  ++   + LL+ M+ + +
Sbjct: 562 IKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGL 621

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN- 183
             D + Y+ ++    KM N+  A  ++ ++   G   ++  Y T I  +C  G  ++A  
Sbjct: 622 APDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYL 681

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            L++ +ENA + P D T+ +L+    K    E  +S+     + K++PS
Sbjct: 682 LLLRGVENAFI-PNDVTWYILVSNFIKEIGKENGISFG----TAKVIPS 725



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 4/152 (2%)

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            K Y+   ++L+   A    +  ++ Y  +M+S+ ++P+   F  +++ LC       A 
Sbjct: 173 FKSYNVVLDILVS--ANCPSVAANVFY--EMLSKGVIPTVYTFGVVMKALCMVNEVDNAC 228

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L      G  PN + Y  LI   +K   + E LKL  EM      P +  +  +I  L
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           C+  ++ E  K    M      P    Y  L+
Sbjct: 289 CRLNRIHEGAKLVDRMLFRGFTPNDITYGVLM 320


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 172/362 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           +F V   + + G+  + I+ NTL+  +            +  ++      ++ +  TL++
Sbjct: 64  SFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLN 123

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+ ++ + +L  I  +   P V++  ++I  + +++ + E   L   M  + +  
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS ++Y       L  A  +  EM+ +  + N + YT  + A C+ GK++EA  L+
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G+KP   ++N L++G      ++ +      M+ + + P+  ++N MI RLC+ 
Sbjct: 244 AVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS 303

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +L   L K   PN +TYS LI G+ K G I   L L  EM ++     +  Y
Sbjct: 304 KRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTY 363

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSL+ +LC+   L++A   F  MK   + P    Y +L+    + G    A  L + ++ 
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLV 423

Query: 367 EG 368
           +G
Sbjct: 424 KG 425



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 174/363 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E R    +++ +NT+I  + K    +  + +Y  M     +PN  T  TLI 
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY 193

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  GQL     +L+ +  K  +P V   T L+  + +E +++E   LL  M ++ +  
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + ++Y+ ++     +  +++A  ++  M+++G + N + Y   I   C+  +++EA  L+
Sbjct: 254 NVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLL 313

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E+ +  + P   T++ LI+G  K  RI  +L   ++M  R        +  ++  LC+ 
Sbjct: 314 REVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKN 373

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N  +A  +     ++G  PN+ TY+ LI G  K G  +   KL+  +  K     +  Y
Sbjct: 374 QNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTY 433

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +IS LC+ G L+EA      M+ +  +P    +E ++    EK    KA  L  EM++
Sbjct: 434 NVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIA 493

Query: 367 EGL 369
           + L
Sbjct: 494 KDL 496



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 168/360 (46%), Gaps = 8/360 (2%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF +  +S+ TL++ + K        ++ + + +    PN     T+I  LCK   +  
Sbjct: 109 QGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+   +  +   P VI  ++LI       ++ E   LL  M+ KN+  +   Y++++ 
Sbjct: 169 AYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD 228

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   ++ A  +   M K G   N   Y T +  YC  G+++ A  +   M   G+ P
Sbjct: 229 ALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N++I+   K+KR++E+++   +++ + ++P+   ++ +I   C+ G    A  +L
Sbjct: 289 NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G   + +TY+ L+    K   + +   L+ +M+ + I P    YT+LI  LC+ 
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408

Query: 317 GKLEEADKYFKIMKSHSLVPGVDI----YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           G+ + A K F+    H LV G  I    Y  ++    ++G   +AL +  +M   G  P 
Sbjct: 409 GRHKNAQKLFQ----HLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 162/346 (46%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           ++ FN ++  + K         +++ M      P+  T+  LI+  C  GQ+     +L 
Sbjct: 10  IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           +I      P  I   +L+  +  +  +++ +    +++ +    D ++Y+ ++    K+ 
Sbjct: 70  KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
              SAL +   +  R    N  +Y T I   C+   + EA  L  EM+  G+ P   T++
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            LI G   A ++ E+     +M+ + + P+   +  ++  LC+ G  K+A  +L +   +
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  PN ++Y+ L+ GY   GE+Q   ++++ M  K ++P + +Y  +I  LC+  +++EA
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA 309

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
               + +   ++VP    Y SL+    + G    AL L +EM   G
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRG 355



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 167/372 (44%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +  A  + + ++ +G    L + N LI+      +    + +   +L+    PN  T
Sbjct: 23  MKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTIT 82

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + TL+  LC  G+++  +   D++  +      +   +L+  + +       + LL+ + 
Sbjct: 83  LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIE 142

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            ++   + + Y+ I+    K + +  A  +Y EM  RG   N   Y+T I  +C  G++ 
Sbjct: 143 DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLM 202

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L+ EM    + P   T+ +L++   K  +++E+ +    M    + P+  ++N ++
Sbjct: 203 EAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLM 262

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C  G  + A  M    + KG +PN  +Y+ +I    K   + E + L  E+ +K++ 
Sbjct: 263 DGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMV 322

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y+SLI   C+ G++  A    K M        V  Y SL+    +  N  KA  L
Sbjct: 323 PNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATAL 382

Query: 361 CEEMVSEGLKPS 372
             +M   G++P+
Sbjct: 383 FMKMKERGIQPN 394



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 181/372 (48%), Gaps = 13/372 (3%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEAT 60
           +L   A+D+   ++ RG   ++I+++TLI+    + +    + +   M L+NI  PN  T
Sbjct: 164 KLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNIN-PNVYT 222

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+ ALCK G+++   ++L  +  +   P V+   +L+        ++    +   M+
Sbjct: 223 YTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMV 282

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +K +  +  +Y++++    K + ++ A+ +  E+L +    N+  Y++ I  +C+ G+I 
Sbjct: 283 QKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRIT 342

Query: 181 EANCLMQEMENAGLKPYD-ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            A  L++EM + G +P D  T+  L++   K + ++++ +   +M  R + P+   +  +
Sbjct: 343 SALDLLKEMYHRG-QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTAL 401

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+ G  K A  +    L KG   N  TY+ +I G  KEG + E L +  +ME    
Sbjct: 402 IDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGC 461

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK--GNKAKA 357
            P    +  +I SL +  + ++A+K    M +  L+   D        H E+      KA
Sbjct: 462 IPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRD-------FHGERSPNENDKA 514

Query: 358 LHLCEEMVSEGL 369
             L  EM+++GL
Sbjct: 515 EKLLHEMIAKGL 526



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 128/253 (50%), Gaps = 3/253 (1%)

Query: 124 MIHDT---IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++ DT   + ++ IV + VKM++  +A+ ++++M  +G   + F     I  +C  G++ 
Sbjct: 3   LVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMT 62

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            +  ++ ++   G +P   T N L++G      +++SL + ++++++       ++  ++
Sbjct: 63  FSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLL 122

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G  + A  +L +  D+   PN + Y+ +I G  K+  + E   LY EM+ + I 
Sbjct: 123 NGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y++LI   C  G+L EA      M   ++ P V  Y  L+    ++G   +A +L
Sbjct: 183 PNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNL 242

Query: 361 CEEMVSEGLKPST 373
              M  EG+KP+ 
Sbjct: 243 LAVMTKEGVKPNV 255



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 145/318 (45%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P       ++ +L K     T + +  ++  K   P +     LI       ++     +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L ++L+     +TI  + ++        ++ +L  +++++ +GF  +   Y T +   C+
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+   A  L++ +E+   +P    +N +I+G  K K + E+     +M +R + P+   
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++ +I   C  G   +A G+L   + K  +PN  TY+ L+    KEG+++E   L   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + + P + +Y +L+   C  G+++ A + F  M    + P V  Y  ++    +     
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 356 KALHLCEEMVSEGLKPST 373
           +A++L  E++ + + P+T
Sbjct: 308 EAMNLLREVLHKNMVPNT 325



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 130/286 (45%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R +P ++    ++  +++ +     + L K+M  K +  D    ++++     +  +  +
Sbjct: 5   RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             V  ++LK G+  N+    T +   C  G+++++     ++   G +    ++  L+ G
Sbjct: 65  FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNG 124

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K      +L     +  R   P+   +N +I  LC+     +A  + +    +G  PN
Sbjct: 125 LCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPN 184

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            ITYS LI G+   G++ E   L  EM  K+I+P +  YT L+ +LC+ GK++EA     
Sbjct: 185 VITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLA 244

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +M    + P V  Y +L+  +   G    A  +   MV +G+ P+ 
Sbjct: 245 VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNV 290


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 169/361 (46%), Gaps = 38/361 (10%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQT 76
           G   S+ S NTL++V+ ++ R DLV  ++++  E+    PN  T   L+ ALCK   +++
Sbjct: 148 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 207

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +LD I                                       ++ + + Y+ I+ 
Sbjct: 208 AYKVLDEIPAM-----------------------------------GLVPNLVTYTTILG 232

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
             V   ++ESA  V EEML RG+  ++  YT  +  YC+ G+  EA  +M +ME   ++P
Sbjct: 233 GYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEP 292

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
            + T+ ++I    K K+  E+ +  ++M+ R  +P  S   ++I  LCE     +A G+ 
Sbjct: 293 NEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLW 352

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L     P+    S LI    KEG + E  KL+ E +  SI P+L  Y +LI+ +C+ 
Sbjct: 353 RKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSI-PSLLTYNTLIAGMCEK 411

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
           G+L EA + +  M      P    Y  L+    + GN  + + + EEM+  G  P+ T++
Sbjct: 412 GELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTF 471

Query: 376 L 376
           L
Sbjct: 472 L 472



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 4/255 (1%)

Query: 12  RYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           R LE+   RG+    I++  L+    K  R      +   M +N   PNE T   +I AL
Sbjct: 245 RVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 304

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK  +     +M D +  +   P   +   +I  + ++ +++E   L ++ML+ N + D 
Sbjct: 305 CKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 364

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
              S +++   K   +  A  +++E   +G   +   Y T I   CE G++ EA  L  +
Sbjct: 365 ALLSTLIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 423

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M     KP   T+N+LIEG +K   ++E +   E+M+     P+ + F  +   L + G 
Sbjct: 424 MFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGK 483

Query: 249 AKQANGMLTLALDKG 263
            + A  ++++A+  G
Sbjct: 484 EEDAIKIVSMAVMNG 498



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 94/214 (43%), Gaps = 1/214 (0%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS-YCEQ 223
           ++   +  Y   G+ E +  +   + + G+K    + N L+    + +R +   + +   
Sbjct: 120 LFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 179

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
             S  + P+    N +++ LC+  + + A  +L      G  PN +TY+ ++GGY   G+
Sbjct: 180 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGD 239

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           ++   ++  EM  +   P    YT L+   C+ G+  EA      M+ + + P    Y  
Sbjct: 240 MESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 299

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           ++    ++    +A ++ +EM+     P +S  C
Sbjct: 300 MIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCC 333


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 35/372 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R F+ A  V   + +RG  L+ +++N LI  + +S   +  +   + M +    P+  T
Sbjct: 235 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 294

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  +      +LD +      P V+V  +LI   ++E   +E   ++K   
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIK--- 351

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                                           EM+  G   N   Y   +   C+ G+++
Sbjct: 352 --------------------------------EMVAAGVQPNKITYDNLVRGLCKMGQMD 379

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A+ L+++M     +P   T+NL+IEG  +    +++     +M +  + P+   ++ MI
Sbjct: 380 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 439

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G  ++A+ +L     KG  PN   Y+ LI GY +EG +    +++ +M   ++ 
Sbjct: 440 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 499

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P L  Y SLI  L + G++EE+ KYF  M+   L+P    Y  L+  +L+ G+   A  L
Sbjct: 500 PDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQL 559

Query: 361 CEEMVSEGLKPS 372
            + M+  GLKP+
Sbjct: 560 VQRMLDTGLKPN 571



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 160/350 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++N +I    +       +R+   M      PN  T   +I  LC+ G+ +   D+L+ 
Sbjct: 398 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 457

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K   P   V   LI    +E  +     +  +M + N++ D   Y+ +++   K+  
Sbjct: 458 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 517

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E +   + +M +RG   N F Y+  I  Y + G +E A  L+Q M + GLKP D  +  
Sbjct: 518 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 577

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+E   K+  IE+  S  + M+ + ++     +  +I  L   GN + A  +L+     G
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+   YS LI G  K  + ++   +  EM  K + P +  Y +LI  LC+ G +  A 
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             F  + +  LVP    Y SL+    + G+ + A +L  EM++ G+ P  
Sbjct: 698 NVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 747



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 160/351 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ +  LI    +    D  +++ + M+     PN+ T   L+  LCK GQ+     +L
Sbjct: 326 NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 385

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P  I    +I    +    ++   LL  M    +  +   YS++++   + 
Sbjct: 386 KQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 445

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E A  + EEM  +G   N+FVY   I  YC  G +  A  +  +M    + P    +
Sbjct: 446 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 505

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G +K  R+EES  Y  QM  R LLP+   ++ +I    + G+ + A  ++   LD
Sbjct: 506 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  PN++ Y  L+  Y K  +I++V   +  M  + +      Y  LI +L   G +E 
Sbjct: 566 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 625

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +    ++ +  VP V +Y SL+    +  ++ KA  + +EM  +G+ P+
Sbjct: 626 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 676



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 164/369 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +E  G S ++ +++ +IH + +S   +    + + M      PN      LIS
Sbjct: 416 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 475

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G +    ++ D++      P +    SLI  + +  R+EE      +M  + ++ 
Sbjct: 476 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 535

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   YS +++  +K  +LESA  + + ML  G   N  +Y   + +Y +   IE+ +   
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M + G+   +  + +LI   + +  +E +      +     +P    ++ +I  LC+ 
Sbjct: 596 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 655

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            + ++A G+L     KG  PN + Y+ LI G  K G+I     ++  +  K + P    Y
Sbjct: 656 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 715

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI   C+ G +  A   +  M +  + P   +Y  L       G+  +A+ L EEM  
Sbjct: 716 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL 775

Query: 367 EGLKPSTSY 375
            G    +S+
Sbjct: 776 RGHASISSF 784



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 154/333 (46%), Gaps = 18/333 (5%)

Query: 35  KSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVI 94
           KSD  + V   ++ ML+     +      LI  L   G ++    +L  I      P V 
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 643

Query: 95  VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM 154
           V +SLI  + +    E+   +L  M +K +  + + Y+ ++    K  ++  A  V+  +
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           L +G   N   YT+ I   C+ G I  A  L  EM   G+ P    +++L  GC+ A  +
Sbjct: 704 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 763

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           E+++   E+M  R    S S+FN ++   C+ G  ++   +L + + +G  PN +T  ++
Sbjct: 764 EQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENI 822

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G ++ G++ EV  ++ E++ K+       ++SL   +   GK+               
Sbjct: 823 ISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-------------- 868

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
              +D+ + ++  H ++GN  KAL L + +V++
Sbjct: 869 ---LDVVDDMIRDHCKEGNLDKALMLRDVIVAK 898



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 112/234 (47%)

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K+R  ++A  V  EM +RG   N+  Y   I   C  G +EEA    ++ME+ GL P   
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+  LI G  K++R  E+ +  ++M   +L P+   +  +I      GNA +A  M+   
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           +  G  PN+ITY +L+ G  K G++     L  +M   S  P    Y  +I    +    
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 413

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++A +    M++  + P V  Y  ++    + G   KA  L EEM ++GLKP+ 
Sbjct: 414 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 13/182 (7%)

Query: 205 IEGCAKAKRIEESL-SYCE------------QMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           +EG A   R   +L +YC+            +M  R    +   +N +I  LC  G  ++
Sbjct: 216 VEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 275

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A G      D G  P+  TY  LI G  K     E   L  EM    + P +  Y +LI 
Sbjct: 276 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 335

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              + G  +EA K  K M +  + P    Y++LV    + G   +A  L ++MV +  +P
Sbjct: 336 GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 395

Query: 372 ST 373
            T
Sbjct: 396 DT 397


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 173/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G   ++ +FNTLI  +    +   V  ++  M+     PN  T  TLI+
Sbjct: 122 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLIN 181

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G     + +L  +    C P V+V TS+I  + ++ ++ +   L   M+ + +  
Sbjct: 182 GLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 241

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ +++A   +   +    +  EM+      N  +++T + A C+ GK+ EA+ ++
Sbjct: 242 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 301

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G++P   T+N L++G      ++E++   + M+ +   P   +++ +I   C+ 
Sbjct: 302 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 361

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A  +      K   PN +TYS L+ G    G +Q+ + L++EM  +   P   +Y
Sbjct: 362 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+  LC+  +L+EA    K ++  ++ P + IY  ++      G    A  L   + S
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 481

Query: 367 EGLKPS 372
           +GL P+
Sbjct: 482 KGLHPN 487



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 160/336 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +     +   ++  G   ++ + N LI+      R    + +   +L+    PN AT
Sbjct: 81  MKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 140

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC  G++   + + D++ G+   P V+   +LI  + +       + LL+ M 
Sbjct: 141 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 200

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           + N   D + Y+ I+ +  K R +  A  ++ EM+ +G S + F Y + I A C   + +
Sbjct: 201 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 260

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
               L+ EM N+ + P    F+ +++   K  ++ E+    + M+ R + P+   +N ++
Sbjct: 261 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 320

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C      +A  +    + KGF+P+ ++YS LI GY K   I++ + L+ EM  K + 
Sbjct: 321 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 380

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           P    Y++L+  LC  G+L++A   F  M +   +P
Sbjct: 381 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP 416



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 175/368 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +EQ      ++ + ++I  + K  +    + ++  M+     P+  T  +LI 
Sbjct: 192 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 251

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC   + +    +L+ +   +  P V++ ++++  + +E ++ E   ++  M+++ +  
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++        ++ A+ V++ M+ +GF+ +   Y+T I  YC+  +IE+A  L 
Sbjct: 312 NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLF 371

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    L P   T++ L+ G     R++++++   +M++R  +P   ++  ++  LC+ 
Sbjct: 372 EEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKN 431

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +L         P+   Y+ +I G  + GE++    L+  +  K + P +  Y
Sbjct: 432 RRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTY 491

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +I+ LCQ G L EA K F  MK     P    Y  +    L      + + L +EM++
Sbjct: 492 TIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLA 551

Query: 367 EGLKPSTS 374
            G     S
Sbjct: 552 RGFSADVS 559



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 166/356 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+  F  L+  +TK      V  +   M      PN  T+  LI++ C   +L     +L
Sbjct: 67  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVL 126

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P +    +LI  +  E +I E + L  +M+ +    + + Y  ++    K+
Sbjct: 127 AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKV 186

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +  +A+ +   M +     +  VYT+ I + C+  ++ +A  L  EM + G+ P   T+
Sbjct: 187 GSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTY 246

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI         +   +   +M++ K++P+   F+ ++  LC+ G   +A+ ++ + + 
Sbjct: 247 NSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK 306

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  PN +TY+ L+ G+    E+ E +K++  M  K  +P + +Y++LI+  C+  ++E+
Sbjct: 307 RGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEK 366

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           A   F+ M    L+P    Y +L+      G    A+ L  EMV+ G  P     C
Sbjct: 367 AMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYC 422



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 158/346 (45%), Gaps = 35/346 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G S S+ ++N+LIH +        V  +   M+ +   PN     T++ 
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286

Query: 67  ALCKGGQL---QTYVDML--------------------------------DRIHGKRCSP 91
           ALCK G++      VDM+                                D +  K  +P
Sbjct: 287 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 346

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
            V+  ++LI    + +RIE+ M L + M RK +I +T+ YS +++    +  L+ A+ ++
Sbjct: 347 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 406

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM+ RG   +   Y   +   C+  +++EA  L++ +E + + P  + + ++I+G  +A
Sbjct: 407 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             +E +      + S+ L P+   +  MI  LC+ G   +A+ +      KG+SPN  TY
Sbjct: 467 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 526

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + +  G+ +  E    ++L  EM  +  S  +   T L+  L   G
Sbjct: 527 NLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 150/350 (42%), Gaps = 10/350 (2%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FNTL   ++  +R          ML     P+ A    L+ ++ K     T + +  +
Sbjct: 44  LNFNTLDDALSSFNR----------MLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQ 93

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P +     LI      +R+     +L ++L+     +   ++ ++        
Sbjct: 94  MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +   L ++++M+  GF  N   Y T I   C+ G    A  L++ ME    +P    +  
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+   K +++ ++ +   +M+ + + PS   +N +I  LC     K    +L   ++  
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN + +S ++    KEG++ E   +   M  + + P +  Y +L+   C   +++EA 
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 333

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K F  M      P V  Y +L+  + +     KA++L EEM  + L P+T
Sbjct: 334 KVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 383



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 90/207 (43%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + TF      +  +++A      M +    P    F  L+    K K     LS   QM 
Sbjct: 36  HNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMD 95

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           S  + P+    N +I   C       A  +L   L  G  PN  T++ LI G   EG+I 
Sbjct: 96  SFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIG 155

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           EVL L+ +M  +   P +  Y +LI+ LC+ G    A +  + M+  +  P V +Y S++
Sbjct: 156 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSII 215

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               +     +A +L  EM+ +G+ PS
Sbjct: 216 DSLCKDRQVTQAFNLFSEMIHQGISPS 242


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 165/349 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            S+N +I  + +S +     +++  M++    PN  T  T+I    KGG L+    + D+
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQ 254

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P ++    L+  + +  R++E  VL+  M   +M  D   YS++     +   
Sbjct: 255 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             + L ++ E LK+G    ++  +  +   C+ GK+ +A  +++ + + GL P    +N 
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  + + +  +    EQM SR + P    +N +I  LC+     +A  ++      G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+  T++ LI  Y   G++++   +  +M+ K I   + ++ S++ + C+ GK+ EA 
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                M    + P   +Y S++  ++E G+  +A  L E+M + G+  S
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 543



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 175/369 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E  F +   +   G   +++++N L+  + ++ R D    +   M  +  +P+  T   
Sbjct: 245 LEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSI 304

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L   L + G+ +T + +      K         + L+  + ++ ++ +   +L+ ++   
Sbjct: 305 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 364

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++  T+ Y+ ++    ++R+L  A  ++E+M  R    +   Y   I   C+   + +A 
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 424

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EME +G+ P  ETFN LI+    A ++E+  +    M  + +     +F  +++  
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAF 484

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +L   + K  +PN   Y+ +I  Y + G+ ++   L  +M+   +S ++
Sbjct: 485 CKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 544

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  L+  LC+  +++EA++    +++  L P V  Y +++     KG+  KAL L +E
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 364 MVSEGLKPS 372
           M   G++P+
Sbjct: 605 MNKYGIRPT 613



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 165/354 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G  L   + + L++ + K  +     ++ + ++     P      TLI+  C+   L+
Sbjct: 327 KKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + +++  +   P  I   +LI  + + E + +   L+  M +  +      ++ ++
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A      LE    V  +M ++G  ++   + + + A+C+ GKI EA  ++ +M    + 
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  + +N +I+   ++   E++    E+M +  +  S   +N +++ LC      +A  +
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    ++G  P+ ++Y+ +I     +G+  + L+L  EM    I PTL  Y +L+S+L  
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALAS 626

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            G++ + +  ++ M   ++ P   IY  +V  ++   N +K   L +EM  +G+
Sbjct: 627 AGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 2/266 (0%)

Query: 109 IEEGMVLLKRMLRKNMIH--DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           ++  + +++RM R       D  +Y++++    +      AL V++EM+  G   N   Y
Sbjct: 173 LDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITY 232

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
            T I  + + G +E    L  +M + G KP   T+N+L+ G  +A R++E+    ++M S
Sbjct: 233 NTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMAS 292

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
             + P    ++ +   L   G ++    +   +L KG      T S L+ G  K+G++ +
Sbjct: 293 HSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             ++   + +  + PT   Y +LI+  CQ   L  A   F+ MKS  + P    Y +L+ 
Sbjct: 353 AEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              +     KA  L  EM   G+ PS
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPS 438



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 12/306 (3%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIH------VVTKSDRNDLVWRIYQHMLENIR 54
           +R    AF +   ++ R      I++N LI+      +VTK++  DLV  + +  ++   
Sbjct: 382 VRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE--DLVMEMEKSGVD--- 436

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
            P+  T  TLI A    GQL+    +L  +  K     VI   S++    +  +I E + 
Sbjct: 437 -PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           +L  M+ K++  +   Y+ I+ A ++  + E A ++ E+M   G SA+   Y   +   C
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 555

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
              +I+EA  L+  + N GL+P   ++N +I  C      +++L   ++M    + P+  
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            ++ ++  L   G       +    L K   P+   Y  ++  Y +     +V  L  EM
Sbjct: 616 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 675

Query: 295 EYKSIS 300
             K I+
Sbjct: 676 SEKGIA 681



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 3/189 (1%)

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF--NEMIRRLCECGNA 249
           AG +P    +N +++ C  A  ++ +L+   +M   +  P   AF  N +I  L   G  
Sbjct: 151 AGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKG 210

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +    +D G  PN ITY+ +I G+ K G+++   +L  +M +    P +  Y  L
Sbjct: 211 SDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVL 270

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +S LC+ G+++E       M SHS+ P    Y  L       G     L L  E + +G+
Sbjct: 271 LSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGV 330

Query: 370 KPSTSYLCS 378
               +Y CS
Sbjct: 331 MLG-AYTCS 338


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 184/388 (47%), Gaps = 22/388 (5%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           EQ G+   + S+N L+ ++ KS       ++Y+ +L +   PN  T + LI   CK GQ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              ++ L  +     +P V +   LI  + ++   ++ + L + M    +  D   Y+ +
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 135 VYAKVKMRNLESALVVYEEMLKRGF-SANSFV-YTTFIGA-YCEYGKIEEANCLMQEMEN 191
           +    K  NLE A  + EEM++RG  SA   V Y T I A  C+ G +EEA  ++  M+ 
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           AG  P   T+N +I     A R+ E+    E + +    P    FN ++   C+ G   +
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEA---AEILKTMSCSPDLVTFNTLLDGFCKAGMLPR 255

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L     +   P+ ITY+ L+ G  + G++Q    L  E+  +   P + AYTSL+ 
Sbjct: 256 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 315

Query: 312 SLCQCGKLEEADKYFKIMKSH---------SLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
            LC+ G++EEA K  K M +          ++VP +  Y  ++G  ++ G+ +KA+ L  
Sbjct: 316 GLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 375

Query: 363 EMVSEGLKPST-------SYLCSASTCR 383
           ++V+ G  P           LC A+  R
Sbjct: 376 DLVARGYVPDVVTYNTLIDGLCKANRVR 403



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 177/363 (48%), Gaps = 13/363 (3%)

Query: 22  SLISFNTLIHV-VTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
            ++++NTLI+  + K    +    I   M      P+  T  ++I ALC  G++    ++
Sbjct: 168 DIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI 227

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L  +    CSP ++   +L+    +   +   + +L+ M R+N++ D I Y+++V    +
Sbjct: 228 LKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 284

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME---------N 191
           +  ++ A  + EE++++G+  +   YT+ +   C+ G+IEEA+ L++EM          +
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   T+N+++ G  K   I +++S    +++R  +P    +N +I  LC+    ++
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 404

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +       G  PN++T   ++ G  + G + +   L  EM  K  +P +  YTSLI 
Sbjct: 405 ACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 464

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+  ++++A      M+   +      Y  L+   +  G  A+A+ + +EMV+ G  P
Sbjct: 465 GLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLP 524

Query: 372 STS 374
             S
Sbjct: 525 DGS 527



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 131/291 (45%), Gaps = 9/291 (3%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S  L++FNTL+    K+        + + M      P+  T   L++ LC+ GQ+Q    
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 293

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---------NMIHDTIA 130
           +L+ I  +   P VI  TSL+  + +   IEE   L+K M  +         NM+     
Sbjct: 294 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT 353

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y++++   +K  ++  A+ +  +++ RG+  +   Y T I   C+  ++ EA  L  EM 
Sbjct: 354 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 413

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           + G  P D T   ++ G  +  R++++ S   +M  ++  P+   +  +I  LC+     
Sbjct: 414 SLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 473

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            A  +L     +G + ++  Y  LI      G + E + +Y EM  +   P
Sbjct: 474 DACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLP 524



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 8/169 (4%)

Query: 39  NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
           +DLV R Y         P+  T  TLI  LCK  +++   D+ D +    C P  +   S
Sbjct: 375 SDLVARGY--------VPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGS 426

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           ++  + +  R+++   L+  M RK    + + Y+ ++    K   ++ A VV + M  +G
Sbjct: 427 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQG 486

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
            + + F Y   I +    G++ EA  +  EM   G  P   T   L E 
Sbjct: 487 VALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 535


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 171/371 (46%), Gaps = 41/371 (11%)

Query: 9   DVCR------YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           D CR      ++E   F LS++++N LIH                               
Sbjct: 233 DFCRAKEKILWMESNRFDLSIVTYNVLIH------------------------------- 261

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
                LCKGG +   +++   +  K     V+   +L+L   + ++ ++G+ L+  M+  
Sbjct: 262 ----GLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVEL 317

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             +    A S +V    K  N++SA  +  ++ + GF  N FVY   I A C+   +++A
Sbjct: 318 GFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKA 377

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L + M +  L   D T+++LI+   K   ++ + SY  +M+   +  +   +N +I  
Sbjct: 378 ELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLING 437

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G+   A  + T  +++G  P   T++ LI GY K+ ++++  KLY EM  K I+P+
Sbjct: 438 HCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPS 497

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  +T+LI  LC   ++ EA K F  M    + P    Y  ++  + +  N  KA  L E
Sbjct: 498 VYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLE 557

Query: 363 EMVSEGLKPST 373
           +M+  GL P T
Sbjct: 558 DMLHNGLVPDT 568



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 171/363 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V + L ++G    ++++ TL+    +  + D    +   M+E    P EA +  L+ 
Sbjct: 272 ALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVD 331

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K G + +  D++ ++      P + V  +LI  + + E +++  +L K M   N+  
Sbjct: 332 GLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPL 391

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + YS+++ +  K   L+ A   +  M++ G     + Y + I  +C++G +  A  L 
Sbjct: 392 NDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLY 451

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M N GL+P   TF  LI G  K  ++E++     +M  +++ PS   F  +I  LC  
Sbjct: 452 TKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCST 511

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A+ +    +++   P E+TY+ +I GY K   + +  +L  +M +  + P    Y
Sbjct: 512 NEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTY 571

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LIS LC  G++  A  +   +   +L      Y +L+  +  +G   +AL    EM+ 
Sbjct: 572 RPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQ 631

Query: 367 EGL 369
            G+
Sbjct: 632 RGI 634



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 163/369 (44%), Gaps = 1/369 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF + R + ++  + S+ +F  LI+ +  ++      +++  M+E    P E T   +
Sbjct: 480 EKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVM 539

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK   +    ++L+ +      P       LI  +    R+      +  + +KN+
Sbjct: 540 IEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNL 599

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + YS +++       L  AL    EM++RG + +   +   I    +   ++    
Sbjct: 600 KLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFG 659

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+++M + GL+P    +  +I+  +K    ++S    + M++ K  P+   +   +  LC
Sbjct: 660 LLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLC 719

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   +A  +    L    SPN +TY   +    KEG ++E   L++EM  K +     
Sbjct: 720 KVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LKGLLANTA 778

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  LI   C+ G+L EA K    M  + + P    Y +++  H   G+   A+ L + M
Sbjct: 779 TYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTM 838

Query: 365 VSEGLKPST 373
           + +G++P +
Sbjct: 839 LRKGVEPDS 847



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 164/356 (46%), Gaps = 1/356 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R    + +++N +I    K+   D  + + + ML N   P+  T R LIS LC  G++ 
Sbjct: 526 ERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVS 585

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              D +D +H K      +  ++L+     + R+ E +     M+++ +  D + +++++
Sbjct: 586 AAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLI 645

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              +K ++++    + ++M  +G   +S +YT+ I AY + G  +++   +  M      
Sbjct: 646 DGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCF 705

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+   + G  K   I+ +    E+M++  + P+   +   +  L + GN K+A  +
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L KG   N  TY+ LI G+ K G + E  K+  EM    I P    Y+++I   C+
Sbjct: 766 HHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCR 824

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            G +  A + +  M    + P    +  L+      G   KA  L  +M+S GLKP
Sbjct: 825 SGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP 880



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/360 (22%), Positives = 161/360 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G   ++  +N+LI+   K         +Y  M+     P   T  TLIS  CK  Q++
Sbjct: 421 EDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVE 480

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +   ++ K  +P V   T+LI  +     + E   L   M+ + +    + Y++++
Sbjct: 481 KAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMI 540

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  N++ A  + E+ML  G   +++ Y   I   C  G++  A   + ++    LK
Sbjct: 541 EGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLK 600

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
             +  ++ L+ G     R+ E+LS   +M+ R +         +I    +  + K+  G+
Sbjct: 601 LNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGL 660

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L    D+G  P+ + Y+ +I  Y+KEG  ++  +    M  +   P +  YT+ ++ LC+
Sbjct: 661 LKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCK 720

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            G+++ A   F+ M + ++ P    Y   +    ++GN  +A  L  EM+   L  + +Y
Sbjct: 721 VGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLANTATY 780



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 163/369 (44%), Gaps = 2/369 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRT 63
           + A+D+   L + GF  +L  +N LI+ + K +  D    +Y++M  ++  P N+ T   
Sbjct: 340 DSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNM-HSMNLPLNDVTYSI 398

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G L        R+        +    SLI    +   +     L  +M+ + 
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +      ++ ++    K   +E A  +Y EM ++  + + + +T  I   C   ++ EA+
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM    +KP + T+N++IEG  KA  ++++    E M+   L+P    +  +I  L
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G    A   +     K    NE+ YS L+ GY  +G + E L    EM  + I+  L
Sbjct: 579 CSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL 638

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  LI    +   ++      K M    L P   IY S++  + ++G+  K+    + 
Sbjct: 639 VCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDL 698

Query: 364 MVSEGLKPS 372
           MV+E   P+
Sbjct: 699 MVTEKCFPN 707



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 144/317 (45%), Gaps = 11/317 (3%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E     C  + QRG ++ L+    LI    K      ++ + + M +    P+    
Sbjct: 618 RLTEALSASCEMI-QRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIY 676

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            ++I A  K G  +   + LD +  ++C P V+  T+ +  + +   I+    L ++ML 
Sbjct: 677 TSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLT 736

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
            N+  +++ Y   + +  K  N++ A  ++ EMLK G  AN+  Y   I  +C+ G++ E
Sbjct: 737 ANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIE 795

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  ++ EM   G+ P   T++ +I    ++  +  ++   + M+ + + P   AFN +I 
Sbjct: 796 ATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIY 855

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITY---------SHLIGGYAKEGEIQEVLKLYY 292
             C  G   +A  +    L +G  P +I           + L+ G    GE+   L+LY+
Sbjct: 856 GCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYH 915

Query: 293 EMEYKSISPTLPAYTSL 309
            M  +++  +L  +  L
Sbjct: 916 SMLTRAVKLSLEMWKCL 932



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/386 (20%), Positives = 156/386 (40%), Gaps = 55/386 (14%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           SF  L+H + +   N L W            P  + + TL   L +G   +   +     
Sbjct: 98  SFAILVHALVQ---NKLFW------------PANSLLHTL---LLRGSDPKFVFEKFLES 139

Query: 85  HGKRCSPMVIVNTSLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           H K+C     +    ++   +Q  R+ + +V+L+ ML   ++ +    S I+   +++R 
Sbjct: 140 H-KQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRK 198

Query: 144 LESALVVYEEMLKRGFSANSFV-----------------------------------YTT 168
                 V++E +  G   + +                                    Y  
Sbjct: 199 FILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNV 258

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C+ G + EA  + + +   GLK    T+  L+ G  + ++ ++ +    +M+   
Sbjct: 259 LIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELG 318

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            +P+ +A + ++  L + GN   A  ++      GF PN   Y+ LI    K  ++ +  
Sbjct: 319 FVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAE 378

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            LY  M   ++      Y+ LI S C+ G L+ A+ YF  M    +   +  Y SL+  H
Sbjct: 379 LLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGH 438

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTS 374
            + G+ + A  L  +M++EGL+P+ +
Sbjct: 439 CKFGDLSAAEFLYTKMINEGLEPTAT 464



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 112/271 (41%), Gaps = 19/271 (7%)

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF---------- 169
           L KNM H T +++++V+A V+ +    A  +   +L RG S   FV+  F          
Sbjct: 88  LHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRG-SDPKFVFEKFLESHKQCKFS 146

Query: 170 --------IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
                   + +Y +  ++ +A  +++ M    L P   T + ++ G  + ++        
Sbjct: 147 STLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVF 206

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++ ++  + P     + +IR LCE  +  +A   +       F  + +TY+ LI G  K 
Sbjct: 207 DESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKG 266

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E L++   +  K +   +  Y +L+   C+  + ++       M     VP     
Sbjct: 267 GGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAV 326

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             LV    +KGN   A  L  ++   G  P+
Sbjct: 327 SGLVDGLRKKGNIDSAYDLVVKLGRFGFLPN 357


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 159/334 (47%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +LE    P+      LI+  CK  ++     +LDR+  K  SP  +    +I  +    +
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           ++  + +L ++L  N     I Y++++ A +    ++ AL + +EML RG   + F Y T
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C+ G ++ A  +++ +E  G +P   ++N+L+       + EE      +M S K
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   ++ +I  LC  G  ++A  +L L  +KG +P+  +Y  LI  + +EG +   +
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +    M      P +  Y +++++LC+ GK ++A + F  +      P    Y ++    
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
              G+K +ALH+  EM+S G+ P      S  +C
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 187/412 (45%), Gaps = 39/412 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R    A  V   LE+ G    + ++N LI+   K +R D   R+   M      P+  T
Sbjct: 137 LRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVT 195

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I +LC  G+L   + +L+++    C P VI  T LI   + E  ++E + L+  ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255

Query: 121 RKNMIHDTIAYSLIVYAKVK----------MRNL-----ESALVVY-------------- 151
            + +  D   Y+ I+    K          +RNL     E  ++ Y              
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315

Query: 152 --EEMLKRGFS----ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
             E+++ + FS     N   Y+  I   C  GKIEEA  L++ M+  GL P   +++ LI
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
               +  R++ ++ + E M+S   LP    +N ++  LC+ G A QA  +     + G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN  +Y+ +       G+    L +  EM    I P    Y S+IS LC+ G ++EA + 
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAK-ALHLCEEMVSEGLKPS-TSY 375
              M+S    P V  Y ++V +   K ++ + A+++ E MV  G +P+ T+Y
Sbjct: 496 LVDMRSCEFHPSVVTY-NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 1/304 (0%)

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G     + +L+ +  K  +P VI+ T LI        I + + +++ +L K    D 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            AY+ ++    KM  ++ A  V + M  + FS ++  Y   IG+ C  GK++ A  ++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           + +   +P   T+ +LIE       ++E+L   ++M+SR L P    +N +IR +C+ G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  M+     KG  P+ I+Y+ L+     +G+ +E  KL  +M  +   P +  Y+ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI++LC+ GK+EEA    K+MK   L P    Y+ L+     +G    A+   E M+S+G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 369 LKPS 372
             P 
Sbjct: 399 CLPD 402



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 34/169 (20%)

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEI---------------------------- 269
           ++  R C  GN  ++  +L   + KG++P+ I                            
Sbjct: 94  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153

Query: 270 ------TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
                  Y+ LI G+ K   I +  ++   M  K  SP    Y  +I SLC  GKL+ A 
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K    + S +  P V  Y  L+   + +G   +AL L +EM+S GLKP 
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 172/369 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +   F +   ++  G    + + N LI+     +R    + +   +L+    P+ AT  T
Sbjct: 83  YPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTT 142

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G++   + + D++ G+   P V+   +LI  + +       + LL+ M + N
Sbjct: 143 LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 202

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y+ I+ +  K R +  A  ++ +M+ +G S + F YT+ I + C   + +   
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 262

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ +M N+ + P    F+ +++   K  +I E+    + M+ R + P+   +N ++   
Sbjct: 263 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  +    +  G++PN I+Y+ LI GY K   + +   L+ EM  K + P  
Sbjct: 323 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +L+  LC  G+L++A   F  M +H  +P +  Y  L+    +K +  +A+ L + 
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442

Query: 364 MVSEGLKPS 372
           +    + P 
Sbjct: 443 IEGSNMDPD 451



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 169/366 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G      +F TLI  +    +      ++  M+     PN  T  TLI+
Sbjct: 121 AFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLIN 180

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G     + +L  +    C P V+V TS+I  + ++ ++ E   L  +M+ + +  
Sbjct: 181 GLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP 240

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ ++++   +   +    +  +M+      +  +++T + A C+ GKI EA+ ++
Sbjct: 241 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 300

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G++P   T+N L++G      ++E++   + M+     P+  ++N +I   C+ 
Sbjct: 301 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 360

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +      K   PN +TY+ L+ G    G +Q+ + L++EM      P L  Y
Sbjct: 361 QRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATY 420

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+  LC+   L+EA    K ++  ++ P + IY  ++      G    A  +   + S
Sbjct: 421 RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS 480

Query: 367 EGLKPS 372
           +GL+P+
Sbjct: 481 KGLRPN 486



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/368 (20%), Positives = 178/368 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +EQ      ++ + ++I  + K  +    + ++  M+     P+  T  +LI 
Sbjct: 191 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 250

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LC   + +    +L+++   +  P V++ ++++  + +E +I E   ++  M+ + +  
Sbjct: 251 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 310

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++        ++ A+ V++ M+  G++ N   Y T I  YC+  ++++A  L 
Sbjct: 311 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 370

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    L P   T+N L+ G     R++++++   +M++   +P  + +  ++  LC+ 
Sbjct: 371 EEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKK 430

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +  +A  +L         P+   Y+ +I G  + GE++    ++  +  K + P +  Y
Sbjct: 431 SHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTY 490

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +I+ LC+ G L+EA+K F  M  +   P    Y ++    L+     +A+ L +EM++
Sbjct: 491 TIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLA 550

Query: 367 EGLKPSTS 374
            G     S
Sbjct: 551 RGFSADVS 558



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 152/360 (42%), Gaps = 10/360 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L    F    ++FNTL   ++  +R          ML     P+      L++++ K  Q
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNR----------MLHMHPPPSTVDFNRLLTSIAKTKQ 82

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
             T   + +++      P V     LI       R      +L ++L+  +  DT  ++ 
Sbjct: 83  YPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTT 142

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        +  AL ++++M+  GF  N   Y T I   C+ G    A  L++ ME   
Sbjct: 143 LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 202

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P    +  +I+   K +++ E+ +   +M+ + + P    +  +I  LC     K   
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 262

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   ++    P+ + +S ++    KEG+I E   +   M  + + P +  Y +L+   
Sbjct: 263 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C   +++EA K F  M  +   P V  Y +L+  + +     KA +L EEM  + L P+T
Sbjct: 323 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 111/239 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +   G++ ++IS+NTLI+   K  R D    +++ M +    PN  T  TL+ 
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 390

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G+LQ  + +   +      P +     L+  + ++  ++E M LLK +   NM  
Sbjct: 391 GLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 450

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    +   LE+A  ++  +  +G   N   YT  I   C  G ++EAN L 
Sbjct: 451 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 510

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM+  G  P   T+N + +G  + K    ++   ++M++R      S    ++  LC+
Sbjct: 511 MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 569



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 139/303 (45%), Gaps = 1/303 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++ F+T++  + K  +      +   M+     PN  T   L+   C   ++   V + 
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 335

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +     +P VI   +LI    + +R+++   L + M +K +I +T+ Y+ +++    +
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L+ A+ ++ EM+  G   +   Y   +   C+   ++EA  L++ +E + + P  + +
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++I+G  +A  +E +      + S+ L P+   +  MI  LC  G   +AN +      
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 515

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+  TY+ +  G  +  E    ++L  EM  +  S  +   T L+  LC   KL++
Sbjct: 516 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD-DKLDQ 574

Query: 322 ADK 324
           + K
Sbjct: 575 SVK 577



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 90/211 (42%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +S  +  F      +  +++A      M +    P    FN L+   AK K+     S  
Sbjct: 31  SSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 90

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            QM S  + P     N +I   C       A  +L   L  G  P+  T++ LI G   E
Sbjct: 91  NQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVE 150

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G+I + L L+ +M  +   P +  Y +LI+ LC+ G    A +  + M+  +  P V +Y
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            S++    +     +A +L  +MV +G+ P 
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPD 241


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 185/373 (49%), Gaps = 10/373 (2%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLV-------WRIYQ---HMLENIRYPNEATI 61
           R L   G    ++S+N ++  +  + R D V        R+++    M E+   P+    
Sbjct: 202 RKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMY 261

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I  +CK G  +   D+L R+      P V+   +++  +   ER EE   LL  M +
Sbjct: 262 ATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ 321

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           ++   D + ++++V    +   ++  + + E+ML+ G   +   YTT I  +C+ G ++E
Sbjct: 322 EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDE 381

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++ M   G KP   ++ ++++G  +A+R  ++      M+ +  LP+   FN +I 
Sbjct: 382 AVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLIN 441

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +C+ G A+QA  +L   L  G SP+ I+YS +I G  K G+ +E L+L   M  K I+P
Sbjct: 442 FMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITP 501

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y+S+ S+L + G+ ++  + F  ++  ++     +Y +++    ++    +A+   
Sbjct: 502 NTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFF 561

Query: 362 EEMVSEGLKPSTS 374
             MVS G  P+ S
Sbjct: 562 AYMVSNGCMPNES 574



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 164/362 (45%), Gaps = 35/362 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           EVA D+   +   G   +++ +NT++  +  ++R +    +   M +     ++ T   L
Sbjct: 275 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 334

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +   C+ G +   +++L+++    C P VI  T++I    +E  ++E ++LLK M     
Sbjct: 335 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 394

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +TI+Y++++    +      A  +   M+++G   N   + T I   C+ G  E+A  
Sbjct: 395 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIE 454

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+++M   G  P   +++ +I+G  KA + EE+L                          
Sbjct: 455 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE------------------------- 489

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                     +L + ++KG +PN I YS +    ++EG   ++++++  ++  ++     
Sbjct: 490 ----------LLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAA 539

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y ++ISSLC+  + + A  +F  M S+  +P    Y  L+     +G   +A  L  E+
Sbjct: 540 LYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599

Query: 365 VS 366
            S
Sbjct: 600 CS 601



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/410 (21%), Positives = 175/410 (42%), Gaps = 50/410 (12%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R L+  G +  ++++N +I    ++ +   V    +        PN  T   ++ +L
Sbjct: 62  DAARALDTAGDAAGVVAYNAMIAGYCRAGQ---VAAARRLAAAVPVPPNAYTYFPIVRSL 118

Query: 69  C-----------------------------------KGGQLQTYVDMLDRIHGKRCSPMV 93
           C                                   +GG  ++ V  L  +H K C+ + 
Sbjct: 119 CARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCT-LD 177

Query: 94  IVNTSLILRIIQEER-IEEGMVLLKRMLRKNMIHDTIAYSLIVYA---KVKMRNLESALV 149
             N +L++  I E+  ++EG+ LL+++       D ++Y+ ++       +  ++E  +V
Sbjct: 178 SGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMV 237

Query: 150 ----VYE---EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
               V+E   +M + G + +  +Y T I   C+ G  E AN ++  M + GLKP    +N
Sbjct: 238 EMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYN 297

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +++G   A+R EE+     +M           FN ++   C+ G   +   +L   L+ 
Sbjct: 298 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 357

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P+ ITY+ +I G+ KEG + E + L   M      P   +YT ++  LC+  +  +A
Sbjct: 358 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 417

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +    M     +P    + +L+    +KG   +A+ L ++M+  G  P 
Sbjct: 418 QELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPD 467



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 134/291 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A D+   + Q    L  ++FN L+    ++   D V  + + MLE+   P+  T  T
Sbjct: 309 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTT 368

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+  CK G +   V +L  +    C P  I  T ++  + + ER  +   L+  M+++ 
Sbjct: 369 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 428

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + + + ++ ++    K    E A+ + ++ML  G S +   Y+T I    + GK EEA 
Sbjct: 429 CLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 488

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  M N G+ P    ++ +    ++  R ++ +   + +    +    + +N +I  L
Sbjct: 489 ELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSL 548

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           C+     +A       +  G  PNE TY+ LI G A EG ++E   L  E+
Sbjct: 549 CKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 102/211 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   + IS+  ++  + +++R      +  HM++    PN  T  TLI+ +CK G  +  
Sbjct: 393 GCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQA 452

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L ++    CSP +I  +++I  + +  + EE + LL  M+ K +  +TI YS +  A
Sbjct: 453 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASA 512

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +    +  + +++ +      +++ +Y   I + C+  + + A      M + G  P 
Sbjct: 513 LSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 572

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           + T+ +LI G A    + E+     ++ SR+
Sbjct: 573 ESTYTILIRGLASEGLVREAQDLLSELCSRR 603



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/324 (20%), Positives = 134/324 (41%), Gaps = 19/324 (5%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +I+  C+ GQ+     +   +      P       ++  +     I + + +L  M  +
Sbjct: 81  AMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLR 137

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                     +I+ A  +     SA+   + +  +G + +S      + A CE G ++E 
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAK-------------RIEESLSYCEQMMSRKL 229
             L++++ + G +P   ++N +++G   AK             R+ E+LS   QM     
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALS---QMPEHGC 254

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P    +  +I  +C+ G+ + AN +L+     G  PN + Y+ ++ G       +E   
Sbjct: 255 TPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAED 314

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L  EM  +        +  L+   CQ G ++   +  + M  H  +P V  Y +++    
Sbjct: 315 LLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC 374

Query: 350 EKGNKAKALHLCEEMVSEGLKPST 373
           ++G   +A+ L + M + G KP+T
Sbjct: 375 KEGLVDEAVMLLKNMSACGCKPNT 398


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 178/366 (48%), Gaps = 3/366 (0%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           + F+  +     G  LS+ S N L+  + K      +  +Y+ M+     P   +   +I
Sbjct: 111 LGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVI 170

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRK 122
           + LCK G+L    D+++ +  +  S  VI   +LI    ++ +  ++ +   +LK M   
Sbjct: 171 NGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRAD 230

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + +++++    K +N+ +A+ V+ EM ++G   N   Y + I   C  GK+ EA
Sbjct: 231 GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA 290

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  +M N+ LKP   T N L+ G  K K ++++    + M  + + P+ + +N +I  
Sbjct: 291 TALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDA 350

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+  N + A  +  + L KG  P+  TY+ LI G  ++G+++    L  EM+ K +   
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           L  Y  LI SLC  G++++A +    M    L P    Y +++  + ++GN   AL+L  
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRS 470

Query: 363 EMVSEG 368
           +M   G
Sbjct: 471 QMEKVG 476



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 166/349 (47%), Gaps = 3/349 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRT 63
           A D+   ++ RG S ++I++NTLI    K  +   +++   I + M  +   PNE T   
Sbjct: 182 AGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNI 241

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK   +   + +   ++ +   P V+   SLI  +    ++ E   L  +M+   
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I ++ ++    K + ++ A  ++++M K+G + N   Y   I AYC+   +E+A 
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L + M   G+ P   T+N LI G  +   +E + +   +M ++ L      +N +I  L
Sbjct: 362 ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G  K+A  +L     KG  P+++TY+ +I GY KEG ++  L L  +ME       +
Sbjct: 422 CNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANV 481

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
             Y  LI   C+  KLE+A+     M    L+P    YE +    +EKG
Sbjct: 482 ATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 38/294 (12%)

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           K M+R+ +    I++++++    K+  L  A  + E+M  RG SAN   Y T I  YC+ 
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 177 GKIEE---ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           GKI +   A+ +++EM   G+ P + TFN+LI+G  K K +  ++    +M  + + P+ 
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             +N +I  LC  G   +A  +    ++    PN IT++ L+ G+ K   +++  +L+ +
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG------- 346
           M  + I+P +  Y  LI + C+   +E+A   ++IM    + P V  Y  L+        
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391

Query: 347 -------------IHLE---------------KGNKAKALHLCEEMVSEGLKPS 372
                         HL+               KG   KAL L +EM  +GLKPS
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPS 445



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 141/293 (48%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            A  V   + ++G   +++++N+LI+ +  + + +    +   M+ +   PN  T   L+
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           +  CK   ++   ++ D +  +  +P V     LI    ++E +E+   L + ML K + 
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   Y+ ++    +  +LE+A  +  EM  +   A+   Y   I + C  G++++A  L
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM   GLKP   T+N +I+G  K   +  +L+   QM     L + + +N +I+  C+
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
               + ANG+L   L+KG  PN +TY  +     ++G + ++    Y++   S
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVAVSS 546



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 130/292 (44%), Gaps = 5/292 (1%)

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           G+   P+  V T L L  I     E+  +LL  +   +   ++I   ++V+A  K     
Sbjct: 53  GQSSKPISRVQTPL-LSFINYSTQEQTQILLS-VSGDSFCANSIIVDILVWAYAKNLRTR 110

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
                ++     G   +       +    + G+I +   + +EM    ++P   +FN++I
Sbjct: 111 LGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVI 170

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ---ANGMLTLALDK 262
            G  K  ++ ++    E M  R +  +   +N +I   C+ G   +   A+ +L      
Sbjct: 171 NGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRAD 230

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  PNE+T++ LI G+ K+  +   +K++ EM  + + P +  Y SLI+ LC  GK+ EA
Sbjct: 231 GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA 290

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
                 M +  L P +  + +L+    +     +A  L ++M  +G+ P+ +
Sbjct: 291 TALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 16/156 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A ++   ++ +     LI++N LI  +          R+   M      P++ T  T
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   CK G L+  +++  ++        V     LI    +++++E+   LL  ML K 
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +I + + Y                 +V EEM+++GF
Sbjct: 512 LIPNRMTYE----------------IVTEEMMEKGF 531


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 158/319 (49%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN     TLI   CK G+++   D+   +            T LI  + +    ++G  +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            ++M    +  +   Y+ ++    K    + A  V++EM +RG S N   Y T IG  C 
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K+ EAN ++ +M++ G+ P   T+N LI+G     ++ ++LS C  + SR L PS   
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++   C  G+   A  M+    ++G  P+++TY+ LI  +A+   +++ ++L   ME
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P +  Y+ LI   C  G++ EA + FK M   +  P   IY +++  + ++G+  
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495

Query: 356 KALHLCEEMVSEGLKPSTS 374
           +AL L +EM  + L P+ +
Sbjct: 496 RALKLLKEMEEKELAPNVA 514



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 155/316 (49%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++  LI+ + K+      + +Y+ M E+  +PN  T   +++ LCK G+ +    + D +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +  S  ++   +LI  + +E ++ E   ++ +M    +  + I Y+ ++     +  L
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             AL +  ++  RG S +   Y   +  +C  G    A  +++EME  G+KP   T+ +L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+  A++  +E+++     M    L+P    ++ +I   C  G   +A+ +    ++K  
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PNE+ Y+ +I GY KEG     LKL  EME K ++P + +Y  +I  LC+  K +EA++
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534

Query: 325 YFKIMKSHSLVPGVDI 340
             + M    + P   I
Sbjct: 535 LVEKMIDSGIDPSTSI 550



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 162/348 (46%), Gaps = 20/348 (5%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR--I 84
           ++L+H +T+S+ +   +R+Y           E  I + + +      +  + +M+D   +
Sbjct: 78  SSLLHYLTESETSKTKFRLY-----------EVIINSYVQSQSLNLSISYFNEMVDNGFV 126

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
            G  C         L+  ++      +          K ++ D  ++ +++    +   +
Sbjct: 127 PGSNCF------NYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEI 179

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E +  +  E+ + GFS N  +YTT I   C+ G+IE+A  L  EM   GL   + T+ +L
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  K    ++     E+M    + P+   +N ++ +LC+ G  K A  +     ++G 
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           S N +TY+ LIGG  +E ++ E  K+  +M+   I+P L  Y +LI   C  GKL +A  
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + +KS  L P +  Y  LV     KG+ + A  + +EM   G+KPS
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 192/422 (45%), Gaps = 56/422 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +  A  + R +E +G + +L++ N LI+  ++  +N L + ++ ++L+    PN  T+ T
Sbjct: 76  YHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTT 135

Query: 64  LI-------------SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI-----LRIIQ 105
           LI             + LCK GQ +  + +L R+ GK   P V++  ++I     ++++ 
Sbjct: 136 LIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 195

Query: 106 E------ERIEEGMV------------------------LLKRMLRKNMIHDTIAYSLIV 135
           E      E + EG+                         L  +M+ +N+  D   ++++V
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 255

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   ++    V+  M+K+G   N   Y + +  YC   ++ +AN +   M   G+ 
Sbjct: 256 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN 315

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  +++N++I G  K K+++E+++  ++M  + ++P+   +  +I  LC+ G    A  +
Sbjct: 316 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKL 375

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL--------YYEMEYKSISPTLPAYT 307
           +    D+G  P+ ITYS ++    K  ++ + + L        + ++  K  +  + AYT
Sbjct: 376 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYT 435

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            +I   C  G   EA      M+ +  +P    YE ++    +K     A  L  EM++ 
Sbjct: 436 VMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 495

Query: 368 GL 369
           GL
Sbjct: 496 GL 497



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/292 (19%), Positives = 129/292 (44%), Gaps = 26/292 (8%)

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +H K  +P +     ++  +++       + L ++M  K +  + +  ++++    ++  
Sbjct: 51  LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              +  V+  +LK+G+  N    TT I   C                         ++  
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLC----------------------LKVSYGT 148

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  K  +   +L    ++  + + P+   +N +I  +C+     +A  + +  + +G
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+ +TYS LI G+   G++++ + L+ +M  ++I P +  +  L+   C+ GK++E  
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIH--LEKGNKAKALHLCEEMVSEGLKPST 373
             F +M    + P V  Y SL+  +  +++ NKA ++     M   G+ P T
Sbjct: 269 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIF--NTMAQGGVNPDT 318



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 25/265 (9%)

Query: 116 LKRML-RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
             R+L +KN       +  I+ + VK+    +A+ ++ +M  +G ++N       I  + 
Sbjct: 47  FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSC 233
           + G+   +  +   +   G  P   T   LI+G C K                       
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKV---------------------- 144

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
            ++  +I  LC+ G A+ A  +L     K   PN + Y+ +I    K   + E   LY E
Sbjct: 145 -SYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M  + ISP +  Y++LIS     GKL++A   F  M   ++ P V  +  LV    + G 
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263

Query: 354 KAKALHLCEEMVSEGLKPSTSYLCS 378
             +   +   M+ +G+KP+    CS
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCS 288



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 8/194 (4%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           I+  M +    P+  +   +I+  CK  ++   +++  ++H K   P V+  TSLI  + 
Sbjct: 305 IFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLC 364

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV--------VYEEMLK 156
           +  +I   + L+  M  + +  D I YS I+ A  K   ++ A+         V+E++  
Sbjct: 365 KSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFV 424

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           +G++ + + YT  I  +C  G   EA  L+ +ME+ G  P  +T+ ++I    K    + 
Sbjct: 425 KGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDM 484

Query: 217 SLSYCEQMMSRKLL 230
           +     +M++R LL
Sbjct: 485 AEKLLREMIARGLL 498


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 160/317 (50%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N+ T+  LI++LC+   +   V +L ++      P  +  T+LI  +  E RI+E + L 
Sbjct: 120 NDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELF 179

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M  ++ + +T+ ++++V    K   +  A  V+E M ++G   N + Y   +  YC  
Sbjct: 180 NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLR 239

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
            ++ +A+ + + M   G  P   ++++LI G  K++RI+E+ +   QM  ++L+P+   +
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTY 299

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +++ LC   +  +A  +       G  PN  TYS L+ G  K G ++E LKL   M+ 
Sbjct: 300 NTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQE 359

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           + + P +  Y  LI  +   GKLE A + F  + ++ + P V  Y  ++   L++G   +
Sbjct: 360 RKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDE 419

Query: 357 ALHLCEEMVSEGLKPST 373
           A  L  +M  +G  P +
Sbjct: 420 AYKLFRKMEDDGFLPDS 436



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 114/247 (46%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           H+    ++++ +  ++ ++  A+ V  +M K G   +S  +TT I   C  G+I+EA  L
Sbjct: 119 HNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVEL 178

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             EM      P   TF +L++   K   + E+    E M  + + P+   +N ++   C 
Sbjct: 179 FNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCL 238

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 A+ +  + + KG +P+  +YS LI GY K   I E   L  +M  K + P    
Sbjct: 239 RLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +L+  LC    L EA + FK M S  ++P +  Y  L+    + G+  +AL L   M 
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358

Query: 366 SEGLKPS 372
              L+P 
Sbjct: 359 ERKLEPD 365



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 135/288 (46%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++F  L+ V+ K         +++ M E    PN  T   L++  C   ++     + + 
Sbjct: 192 VTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEI 251

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + GK C+P V   + LI    +  RI+E   LL +M  K +I +T+ Y+ ++       +
Sbjct: 252 MVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASS 311

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L  A  ++++M   G   N   Y+  +   C++G +EEA  L+  M+   L+P    +N+
Sbjct: 312 LLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNI 371

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G   A ++E +     ++ +  + PS   +N MI+ L + G + +A  +     D G
Sbjct: 372 LIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDG 431

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           F P+  +Y+ +I G+ +  +    ++L  EM  +  S     +  L+ 
Sbjct: 432 FLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 119/264 (45%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I++ M    RM+  N     +     + +  K +   + + +  +M   G + N +    
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I + C    I  A  ++ +M   G++P   TF  LI G     RI+E++    +M  R 
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            +P+   F  ++  LC+ G   +A  +     +KG  PN  TY+ L+ GY    E+ +  
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           K++  M  K  +P++ +Y+ LI+  C+  +++EA      M    L+P    Y +L+   
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
               +  +A  L ++M S G+ P+
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPN 330



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 7/220 (3%)

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           F+G+  +  +      L  +M+  G+   D T N+LI    +   I  ++S   +M    
Sbjct: 92  FLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLG 151

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           + P    F  +I  LC  G  K+A  +      +   PN +T++ L+    K+G + E  
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEAR 211

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            ++  M  K + P +  Y +L++  C   ++ +A K F+IM      P V  Y  L+  +
Sbjct: 212 CVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGY 271

Query: 349 LEKGNKAKALHLCEEMVSEGLKPST-SY------LCSAST 381
            +     +A  L  +M  + L P+T +Y      LC AS+
Sbjct: 272 CKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASS 311



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 98/220 (44%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G + S+ S++ LI+   KS R D    +   M E    PN  T  TL+  LC    L  
Sbjct: 255 KGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLE 314

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             ++  ++      P +   + L+  + +   +EE + LL  M  + +  D + Y++++ 
Sbjct: 315 AQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQ 374

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  LE A  ++ ++   G   +   Y   I    + G  +EA  L ++ME+ G  P
Sbjct: 375 GMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLP 434

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
              ++N++I+G  + +    ++   ++M+ R+     S F
Sbjct: 435 DSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTF 474


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 174/373 (46%), Gaps = 2/373 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E RG   + ++FN LI+   +       + +   +L+    P+  T+ T I   C  GQ
Sbjct: 96  MEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQ 155

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   ++  D++         +   +LI  + +       + LL+R+  K +  D + YS 
Sbjct: 156 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +  K +N+  A  +Y EM+ R  S+N   Y+  I  +C  GK+++A  L  +M +  
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   TFN+L++   K  R++E+ +    MM + + P    +N ++   C       A 
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L     +G +    +Y+ +I G+ K   + + +KL+ EM +K I P +  Y SLI  L
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
           C+ G++  A +   +M      P +  Y S++    +     KA+ L  ++  +G++P+ 
Sbjct: 396 CKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNM 455

Query: 373 -TSYLCSASTCRG 384
            T  +     C+G
Sbjct: 456 YTYTILIDGLCKG 468



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 169/363 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R ++ +   L ++ ++T+I  + K    +  + +Y  M+      N  T   LIS
Sbjct: 194 ALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALIS 253

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+L+  + + +++  +  +P V     L+    +E R++E    L  M+++ +  
Sbjct: 254 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP 313

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++     +  +  A  +   M  RG +A    Y   I  +C+   +++A  L 
Sbjct: 314 DIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLF 373

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM +  + P   T+N LI+G  K+ RI  +L   + M  R   P    ++ ++  LC+ 
Sbjct: 374 KEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKN 433

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +L    D+G  PN  TY+ LI G  K G +++   ++ ++  K  + T+  Y
Sbjct: 434 HLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTY 493

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +I   C  G  +EA      MK +S +P    YE ++    +K    KA  L  EM++
Sbjct: 494 TVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMIT 553

Query: 367 EGL 369
            GL
Sbjct: 554 RGL 556



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 127/264 (48%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           + + + L   +LR+N     + +  I+ + VK ++  + L ++++M  RG   N   +  
Sbjct: 51  VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C+ G I  A  ++ ++   G +P   T N  I+G     +I ++L++ +++++  
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
                 ++  +I  LC+ G  + A  +L     K    + + YS +I    K+  + +  
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            LY EM  + IS  +  Y++LIS  C  GKL++A   F  M S ++ P V  +  LV   
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G   +A +    M+ +G+KP 
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPD 314



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/343 (19%), Positives = 157/343 (45%), Gaps = 18/343 (5%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG + ++ S+N +I+   K    D   ++++ M     +PN  T  +LI  LCK G+
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   ++++D +H +   P +I  +S++  + +   +++ + LL ++  + +  +   Y++
Sbjct: 401 ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTI 460

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   LE A  ++E++L +G++     YT  I  +C +G  +EA  L+ +M++  
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE------------MIR 241
             P   T+ ++I         +++     +M++R LL S   +              +  
Sbjct: 521 CIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNN 580

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              +C +++++     L L++ +    +T S++     K+ E   V+ +Y   ++     
Sbjct: 581 DSLQCTSSQESGNWAKLLLERIYCDCVLTKSNM---RDKDVECPSVI-IYSTCDWSKQGY 636

Query: 302 TLP--AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            L    YT +I   C  G  +E+      M+ +  +P    Y+
Sbjct: 637 ILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/383 (19%), Positives = 153/383 (39%), Gaps = 36/383 (9%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           SF+T       +D  D V  ++  +L     P +     ++ +L K     T + +  ++
Sbjct: 38  SFSTSTTFHNNNDVVDAV-SLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKM 96

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P  +    LI    Q   I     +L ++L+     DTI  +  +        +
Sbjct: 97  EYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQI 156

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             AL  +++++  GF  +   Y T I   C+ G+   A  L++ ++   ++     ++ +
Sbjct: 157 HQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTI 216

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   K K + ++     +M+SR++  +   ++ +I   C  G  K A G+      +  
Sbjct: 217 IDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENI 276

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLK----------------------------------- 289
           +P+  T++ L+  + KEG ++E                                      
Sbjct: 277 NPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKS 336

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           +   M ++ ++ T+ +Y  +I+  C+   +++A K FK M    + P V  Y SL+    
Sbjct: 337 ILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLC 396

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           + G  + AL L + M   G +P 
Sbjct: 397 KSGRISYALELIDLMHDRGQQPD 419


>gi|302757523|ref|XP_002962185.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
 gi|300170844|gb|EFJ37445.1| hypothetical protein SELMODRAFT_77345 [Selaginella moellendorffii]
          Length = 442

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 181/369 (49%), Gaps = 4/369 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V + + ++G+   +I + +L+  ++K+   D   ++ Q ++     P E T  + IS
Sbjct: 63  ACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFIS 122

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+++    ++ R  GK C+  V+    +    + E +IEE + L   M++K +  
Sbjct: 123 GLCKNGRVEEAGKLV-REMGKMCAAEVL--HCIFGGYVLEGKIEEALALKDEMVKKGVTL 179

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ +++    +R  + A  ++E M+++G+  ++  Y   +  +C+ GK++ A  ++
Sbjct: 180 DVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVV 239

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M+ AGL+     +N L++G     R  E+++  + M+ + ++PS   +N ++  LC+ 
Sbjct: 240 EIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLGLCKL 299

Query: 247 GNAKQANGMLTLALDK-GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
           G    A  +L    ++ G  P  ++Y  LI G  K G   E + ++ EM    + P  P+
Sbjct: 300 GQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPS 359

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            TSLI +L    +++EA +  + M    + P    Y +LV +         A  +  EM+
Sbjct: 360 CTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMM 419

Query: 366 SEGLKPSTS 374
                P  S
Sbjct: 420 DNSCVPDGS 428



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 148/346 (42%), Gaps = 39/346 (11%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            +I+AL K  +    +   +R+  ++C P +   T +I  + +  ++     + + M RK
Sbjct: 14  AIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRK 73

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D I Y+ +V    K   ++ A  + +E++ RG       YT+FI   C+ G++EEA
Sbjct: 74  GWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEA 133

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++EM   G     E  + +  G     +IEE+L+  ++M+ + +      +  +I  
Sbjct: 134 GKLVREM---GKMCAAEVLHCIFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTNLIHG 190

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ----------------- 285
           L       +A  M    + +G+ P+  TY  ++  + K+G++Q                 
Sbjct: 191 LFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEAN 250

Query: 286 ------------------EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
                             E + +Y  M  K + P++  Y  L+  LC+ G+  +A    +
Sbjct: 251 CHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILMLGLCKLGQTADARLVLR 310

Query: 328 IMKSHS-LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M+    +VP +  Y +L+    + G   +A+ +  EMV  G+ P 
Sbjct: 311 EMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPD 356



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 41/287 (14%)

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           G +C   V+  T++I  + +  R ++ +   +RM+ +    D   +++++    K   L 
Sbjct: 5   GSQC---VVAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLN 61

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  V++EM ++G+  +  VYT+ +    +   ++EA  L+QE+ + G+KP + T+   I
Sbjct: 62  RACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFI 121

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R+EE+       + R++   C+A                              
Sbjct: 122 SGLCKNGRVEEA-----GKLVREMGKMCAA------------------------------ 146

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
             E+ +  + GGY  EG+I+E L L  EM  K ++  +  YT+LI  L    + +EA + 
Sbjct: 147 --EVLHC-IFGGYVLEGKIEEALALKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEM 203

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           F+ M     VP    Y  +V    ++G    A  + E M + GL+ +
Sbjct: 204 FEAMVQQGYVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEAN 250



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 1/267 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G +L +  +  LIH +    RND    +++ M++    P+  T   ++S  CK G++Q
Sbjct: 174 KKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVQQGYVPDTRTYGMIVSHFCKQGKMQ 233

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +++ +          +  SL+   +   R  E + +   MLRK ++   + Y++++
Sbjct: 234 AACKVVEIMDAAGLEANCHIYNSLMDGFLGVNRAREAINVYDTMLRKMVMPSIVTYNILM 293

Query: 136 YAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
               K+     A +V  EM +R G       Y T I    + G+ +EA  +  EM + G+
Sbjct: 294 LGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGV 353

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   +   LI+  A A R++E+      M    + P   A+N +++ LC       A  
Sbjct: 354 VPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWD 413

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKE 281
           +L   +D    P+  T+  +  G+  +
Sbjct: 414 VLVEMMDNSCVPDGSTFRAMKLGFKAD 440


>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
          Length = 766

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 176/373 (47%), Gaps = 8/373 (2%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE------NIRYPNEATIR 62
           D+   +++      +++   LI+ ++KS R D    +++ M        N+   +     
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLSKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374

Query: 63  TLISALCKGGQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           TLI  LCK G+L+   ++L R+   +RC P  +    LI    +  ++E    ++ RM  
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAVKLETAKEVVSRMKE 434

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  + +  + IV    +   L  A+V + +M K G   N   Y T I A C    +E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A    ++M  AG  P  + +  LI G  + +R  +++   E++          A+N +I 
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+  NA++   MLT    +G  P+ ITY+ LI  + K  + + V ++  +M    + P
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIYESLVGIHLEKGNKAKALHL 360
           T+  Y ++I + C  G+L+EA K FK M  HS V P   IY  L+    + GN  +AL L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674

Query: 361 CEEMVSEGLKPST 373
            EEM  + ++P+ 
Sbjct: 675 KEEMKMKMVRPNV 687



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 1/315 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++N LI    ++ + +    +   M E+   PN  T+ T++  +C+   L   V     
Sbjct: 407 VTYNCLIDGYCRAVKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +     V+   +LI        +E+ M   ++ML      D   Y  ++    ++R 
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              A+ V E++ + GFS +   Y   IG +C+    E+   ++ +ME  G KP   T+N 
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDK 262
           LI    K K  E      EQM    L P+ + +  +I   C  G   +A  +   + L  
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
             +PN + Y+ LI  ++K G   + L L  EM+ K + P +  Y +L   L +  + E  
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706

Query: 323 DKYFKIMKSHSLVPG 337
            K    M   S  P 
Sbjct: 707 LKLMDEMVEQSCEPN 721



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/379 (20%), Positives = 155/379 (40%), Gaps = 50/379 (13%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTK----SDRNDLVWRIYQHMLENIRYPNEATIR 62
           A+D+   L +    L    FN L+  + +    S  NDLV ++ +  +     P+  T+ 
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIR----PDVVTLG 333

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN------TSLILRIIQEERIEEGMVLL 116
            LI+ L K  ++   +++ +++ GKR     ++        +LI  + +  R++E   LL
Sbjct: 334 ILINTLSKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393

Query: 117 KRM-LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            RM L +  + + + Y+ ++    +   LE+A  V   M +     N     T +G  C 
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAVKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +  +  A     +ME  G+K    T+  LI  C     +E+++ + E+M+     P    
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I  LC+      A  ++    + GFS + + Y+ LIG +  +   ++V ++  +ME
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            +   P    Y +LIS   +    E  ++                               
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVER------------------------------- 602

Query: 356 KALHLCEEMVSEGLKPSTS 374
               + E+M  +GL P+ +
Sbjct: 603 ----MMEQMREDGLDPTVT 617



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 136/301 (45%), Gaps = 3/301 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++ TLIH        +     Y+ MLE    P+      LIS LC+  +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +++++     S  ++    LI     +   E+   +L  M ++    D+I Y+ 
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NA 192
           ++    K ++ ES   + E+M + G       Y   I AYC  G+++EA  L ++M  ++
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P    +N+LI   +K     ++LS  E+M  + + P+   +N + + L E    +  
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++   +++   PN+IT   L+   +   E+ ++ K  +   Y   SPT  A    + S
Sbjct: 707 LKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK--FMQGYSVASPTEKASPFDVFS 764

Query: 313 L 313
           L
Sbjct: 765 L 765



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/325 (20%), Positives = 140/325 (43%), Gaps = 1/325 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A +V   +++     ++++ NT++  + +    ++    +  M +     N  T  T
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A C    ++  +   +++    CSP   +  +LI  + Q  R  + + +++++    
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D +AY++++       N E    +  +M K G   +S  Y T I  + ++   E   
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRR 242
            +M++M   GL P   T+  +I+       ++E+L   + M +  K+ P+   +N +I  
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + GN  QA  +      K   PN  TY+ L     ++ + + +LKL  EM  +S  P 
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721

Query: 303 LPAYTSLISSLCQCGKLEEADKYFK 327
                 L+  L    +L +  K+ +
Sbjct: 722 QITMEILMERLSGSDELVKLRKFMQ 746


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 166/391 (42%), Gaps = 36/391 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S++++N ++  ++ +       R +  ML +   PN  T   L+ ALC  G  +  
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +L  + G  C P V+   +L+    +   ++    L+  M    +  + + ++ +V  
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E A  V++EM++ G + +   Y T +G YC+ G   EA  +  EM   G+ P 
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSR------------------------------ 227
             TF  LI    KA  +E +++   QM  R                              
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 228 -----KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
                ++ PS   +N +I   C  G   +A  +L     KG  P+ +TYS +I  Y K  
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +     +L  +M  K + P    Y+SLI  LC   +L +A   FK M    L P    Y 
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           SL+  H ++GN   AL L ++MV  G+ P  
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDV 540



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 175/411 (42%), Gaps = 50/411 (12%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G   +L++FN++++ + K+ + +   +++  M+     P+  +  TL+   CK G 
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC 310

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +   +  K   P V+  TSLI  + +   +E  + L+++M  + +  + + ++ 
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L+ AL+    M +     +   Y   I  YC  G+++EA  L+ EME  G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           LKP   T++ +I    K      +    +QM+ + +LP    ++ +IR LC       A+
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    +  G  P+E TY+ LI G+ KEG ++  L L+ +M    + P +  Y+ LI+ L
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550

Query: 314 --------------------------------------------------CQCGKLEEAD 323
                                                             C  G + EAD
Sbjct: 551 SKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 610

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           K ++ M   +      +Y  L+  H   GN  KAL   ++M+  G  P+++
Sbjct: 611 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNST 661



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 180/416 (43%), Gaps = 50/416 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q+G    +++F +LIHV+ K+   +    + + M E     NE T   LI 
Sbjct: 314 ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALID 373

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G L   +  +  +   R  P V+   +LI       R++E   LL  M  K +  
Sbjct: 374 GFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP 433

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS I+ A  K  +  SA  + ++ML++G   ++  Y++ I   C   ++ +A+ L 
Sbjct: 434 DVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLF 493

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   GL+P + T+  LI+G  K   +E +LS  ++M+   +LP    ++ +I  L + 
Sbjct: 494 KNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKS 553

Query: 247 GNAKQANGML-----------------------------TLALDKGF------------- 264
             A +A  +L                              LAL KGF             
Sbjct: 554 ARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVY 613

Query: 265 --------SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                   + +   YS LI G+ + G + + L  + +M     +P   +  SLI  L + 
Sbjct: 614 QSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFEN 673

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           G + EAD+  + + ++  +   +  ++L+ ++L +GN    L +   M  +GL PS
Sbjct: 674 GMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 156/339 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +   G   +++++NTL+    ++   D   R+   M E    PN  T  ++++
Sbjct: 209 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVN 268

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +CK G+++    + D +  +  +P  +   +L+    +     E + +   M +K ++ 
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 328

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ +++   K  NLE A+ +  +M +RG   N   +T  I  +C+ G +++A   +
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 388

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M+   +KP    +N LI G     R++E+     +M ++ L P    ++ +I   C+ 
Sbjct: 389 RGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 448

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +   A  +    L+KG  P+ ITYS LI     E  + +   L+  M    + P    Y
Sbjct: 449 CDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTY 508

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           TSLI   C+ G +E A      M    ++P V  Y  L+
Sbjct: 509 TSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLI 547


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 173/363 (47%), Gaps = 4/363 (1%)

Query: 4   FEVAFDV-CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TI 61
           F+ AF + C  L+ R    S++ F  ++  + K ++ D+V  ++ H +EN+   ++  + 
Sbjct: 596 FDDAFGLFCEMLQSRPIP-SIVDFTRVLTAIAKMNKFDIVIYLF-HKMENLGISHDLYSF 653

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C+  +    + +L ++      P ++   SL+    Q  R +E + L+  M  
Sbjct: 654 TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  + + Y+ ++    K R+L +AL ++  M K+G  A++  Y T I   C  G+  +
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+++M    + P    F  LI+   K   + E+ +  ++M+ R + P+   +N +I 
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  G    A  M  L + KG  P+ +TY+ LI G+ K   +++ +KL+ EM ++ +  
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y +LI   CQ GKL  A K F  M    + P +  Y  L+      G   KAL + 
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953

Query: 362 EEM 364
           E++
Sbjct: 954 EDL 956



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 171/368 (46%), Gaps = 3/368 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
             +A  +   + + G+  S+++F +L+H     +R    + +   M+++   PN     T
Sbjct: 116 LSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNT 175

Query: 64  LISALCKGGQLQTYVDMLDRIH--GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           LI  LCK G +   +++L+ +   G+  + +V  NT L+  +       +   +L+ M +
Sbjct: 176 LIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNT-LLTGLCYSGEWRQAARILRDMTK 234

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  D   ++ ++ A VK  NL+ A  +Y++ML+     N+  Y + I   C +G++  
Sbjct: 235 RRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYH 294

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A      M + G  P   T+N LI G  K++R+E+ +   ++M    L+     +N +I 
Sbjct: 295 AKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIH 354

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G  + A  + +  +  G +P+ IT+  L+ G    GEI   +  + +M       
Sbjct: 355 GYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYL 414

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            + AY  +I  LC+  K+EEA + F  +    + P    Y  ++    + G + +A  L 
Sbjct: 415 GIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELF 474

Query: 362 EEMVSEGL 369
             M  +G+
Sbjct: 475 RRMKEDGI 482



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 35/407 (8%)

Query: 1    MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
            M  F++   +   +E  G S  L SF  LIH   +  R  L   +   M++    P+  T
Sbjct: 628  MNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVT 687

Query: 61   IRTLISALCKGGQLQTYVDMLDRIHGKRCSP-MVIVNT---------------------- 97
            + +L++  C+G + Q  V ++D +      P +VI NT                      
Sbjct: 688  LGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGME 747

Query: 98   ------------SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                        +LI  +    R  +   LL+ M+++ +  + I ++ ++   VK  NL 
Sbjct: 748  KKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 807

Query: 146  SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
             A  +Y+EM++R    N   Y + I  +C  G++ +A  +   M + G  P   T+N LI
Sbjct: 808  EAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLI 867

Query: 206  EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
             G  K+KR+E+ +    +M  + L+     +N +I   C+ G    A  +    +D G  
Sbjct: 868  TGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVP 927

Query: 266  PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            P+ +TY+ L+      G+I++ L +  +++   +   +  Y  +I  +C+  K++EA   
Sbjct: 928  PDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCL 987

Query: 326  FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            F+ +    +      Y +++      G + +A  LC  M  +G  PS
Sbjct: 988  FRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPS 1034



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 129/282 (45%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P ++  T ++  I +  + +  + L  +M    + HD  +++++++   +      A
Sbjct: 610 RPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLA 669

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L +  +M+K GF  +     + +  +C+  + +EA  L+  M   GL+P    +N +I G
Sbjct: 670 LALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVING 729

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K + +  +L     M  + ++     +N +I  LC  G    A  +L   + +   PN
Sbjct: 730 LCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPN 789

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            I ++ LI  + KEG + E   LY EM  +S+ P +  Y SLI+  C  G+L +A   F 
Sbjct: 790 VIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFD 849

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +M S    P V  Y +L+    +       + L  EM  +GL
Sbjct: 850 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 160/345 (46%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            F+ A  +   + + G   +++ +NT+I+ + K+   +    I+  M +     +  T  T
Sbjct: 701  FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            LIS LC  G+      +L  +  ++  P VI  T+LI   ++E  + E   L K M+R++
Sbjct: 761  LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            +  + + Y+ ++        L  A  +++ M+ +G   +   Y T I  +C+  ++E+  
Sbjct: 821  VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 880

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             L  EM + GL     T+N LI G  +A ++  +     +M+   + P    +N ++  L
Sbjct: 881  KLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            C  G  ++A  M+          + ITY+ +I G  +  +++E   L+  +  K +    
Sbjct: 941  CNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDA 1000

Query: 304  PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
             AY ++IS LC+ G   EADK    MK    +P   IY+  +  H
Sbjct: 1001 IAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDH 1045



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 1/284 (0%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+  T L+  I    R E  +   ++M    + HD  +++++++   +   L  AL +
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             +M+K G+  +   + + +  +C   +I +A  L+  M  +G +P    +N LI+   K
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182

Query: 211 AKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
              +  +L    +M  + +L      +N ++  LC  G  +QA  +L     +  +P+  
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           T++ LI  + K+G + E  +LY +M   SI P    Y SLI+ LC  G+L  A K F +M
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            S    P V  Y +L+    +       + L + M  EGL   T
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 157/374 (41%), Gaps = 1/374 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R +E      + +E  G S  L SF  LIH   +  R  L   I   M++    P+  T
Sbjct: 78  LRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVT 137

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +L+   C   ++     ++  +      P V+V  +LI  + +   +   + LL  M 
Sbjct: 138 FGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEME 197

Query: 121 RKN-MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           +K  +  D + Y+ ++           A  +  +M KR  + + F +T  I A+ + G +
Sbjct: 198 KKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNL 257

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA  L ++M  + + P   T+N LI G     R+  +    + M S+   P+   +N +
Sbjct: 258 DEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTL 317

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I   C+    +    +      +G   +  TY+ LI GY + G+++    ++  M    +
Sbjct: 318 INGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGV 377

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P +  +  L+  LC  G++  A   F  M+S     G+  Y  ++    +     +A  
Sbjct: 378 TPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWE 437

Query: 360 LCEEMVSEGLKPST 373
           L   +  EG+KP  
Sbjct: 438 LFCRLPVEGVKPDA 451



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 149/376 (39%), Gaps = 38/376 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIR 62
           FE A D+   + Q     S++ F  L+  +    R + V    Q M L  I + +  +  
Sbjct: 46  FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH-DLYSFT 104

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C+  +L   + +L ++      P ++   SL+           G  L      +
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLL----------HGFCL------R 148

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N IHD  A+SL+                   M+K G+  N  VY T I   C+ G +  A
Sbjct: 149 NRIHD--AFSLVA-----------------SMVKSGYEPNVVVYNTLIDCLCKNGDVNIA 189

Query: 183 NCLMQEMENAGLKPYD-ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
             L+ EME  G    D  T+N L+ G   +    ++      M  R++ P    F  +I 
Sbjct: 190 LELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALID 249

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              + GN  +A  +    L     PN +TY+ LI G    G +    K +  M  K   P
Sbjct: 250 AFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFP 309

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI+  C+  ++E+  K F+ M    LV     Y +L+  + + G    A  + 
Sbjct: 310 NVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIF 369

Query: 362 EEMVSEGLKPSTSYLC 377
             MVS G+ P     C
Sbjct: 370 SWMVSCGVTPDIITHC 385



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 106/229 (46%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            + A  ++ EML+     +   +T  + A  +  K +    L  +MEN G+     +F +
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTI 655

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI    +  R   +L+   +MM     PS      ++   C+    ++A  ++    + G
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN + Y+ +I G  K  ++   L+++Y ME K I      Y +LIS LC  G+  +A 
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + M    + P V  + +L+   +++GN  +A +L +EM+   + P+
Sbjct: 776 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/426 (21%), Positives = 165/426 (38%), Gaps = 62/426 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            FD+   +  +G   +++++NTLI+   KS R +   +++Q M       +  T  TLI 
Sbjct: 298 TFDL---MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIH 354

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+L+   D+   +     +P +I +  L+  +     I   MV    M       
Sbjct: 355 GYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYL 414

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             +AY+++++   K   +E A  ++  +   G   ++  YT  I   C+ G   EA+ L 
Sbjct: 415 GIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELF 474

Query: 187 QEMENAGLKPYDETFNLLIEG------------CAKAKR-IEESLS----YCEQMMSRKL 229
           + M+  G+    E  +L   G            C K +R I ES      Y +  +   L
Sbjct: 475 RRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSL 534

Query: 230 -----LPSCSAFNEMIRR---LCECGNAKQANG-----------------------MLTL 258
                + S S+    +RR   L E GN  ++                         +  +
Sbjct: 535 VGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCI 594

Query: 259 ALDKGFS-----------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             D  F            P+ + ++ ++   AK  +   V+ L+++ME   IS  L ++T
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            LI   C+C +   A      M      P +    SL+    +     +A+ L + M   
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 368 GLKPST 373
           GL+P+ 
Sbjct: 715 GLEPNV 720



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 81/201 (40%)

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           K ++A  L  EM  +   P    F  ++   AK  + +  +    +M +  +     +F 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I   C C     A  +L   +  GF P+ +T   L+ G+ +    QE + L   M   
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P +  Y ++I+ LC+   L  A + F  M+   +V     Y +L+      G    A
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 358 LHLCEEMVSEGLKPSTSYLCS 378
             L  +MV   + P+  +  +
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTA 795


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 159/334 (47%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +LE    P+      LI+  CK  ++     +LDR+  K  SP  +    +I  +    +
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           ++  + +L ++L  N     I Y++++ A +    ++ AL + +EML RG   + F Y T
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C+ G ++ A  +++ +E  G +P   ++N+L+       + EE      +M S K
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   ++ +I  LC  G  ++A  +L L  +KG +P+  +Y  LI  + +EG +   +
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +    M      P +  Y +++++LC+ GK ++A + F  +      P    Y ++    
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
              G+K +ALH+  EM+S G+ P      S  +C
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 187/412 (45%), Gaps = 39/412 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R    A  V   LE+ G    + ++N LI+   K +R D   R+   M      P+  T
Sbjct: 137 LRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVT 195

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I +LC  G+L   + +L+++    C P VI  T LI   + E  ++E + L+  ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255

Query: 121 RKNMIHDTIAYSLIVYAKVK----------MRNL-----ESALVVY-------------- 151
            + +  D   Y+ I+    K          +RNL     E  ++ Y              
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWE 315

Query: 152 --EEMLKRGFS----ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
             E+++ + FS     N   Y+  I   C  GKIEEA  L++ M+  GL P   +++ LI
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
               +  R++ ++ + E M+S   LP    +N ++  LC+ G A QA  +     + G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN  +Y+ +       G+    L +  EM    I P    Y S+IS LC+ G ++EA + 
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAK-ALHLCEEMVSEGLKPS-TSY 375
              M+S    P V  Y ++V +   K ++ + A+++ E MV  G +P+ T+Y
Sbjct: 496 LVDMRSCEFHPSVVTY-NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 1/304 (0%)

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G     + +L+ +  K  +P VI+ T LI        I + + +++ +L K    D 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            AY+ ++    KM  ++ A  V + M  + FS ++  Y   IG+ C  GK++ A  ++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           + +   +P   T+ +LIE       ++E+L   ++M+SR L P    +N +IR +C+ G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  M+     KG  P+ I+Y+ L+     +G+ +E  KL  +M  +   P +  Y+ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI++LC+ GK+EEA    K+MK   L P    Y+ L+     +G    A+   E M+S+G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 369 LKPS 372
             P 
Sbjct: 399 CLPD 402



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 34/169 (20%)

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEI---------------------------- 269
           ++  R C  GN  ++  +L   + KG++P+ I                            
Sbjct: 94  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153

Query: 270 ------TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
                  Y+ LI G+ K   I +  ++   M  K  SP    Y  +I SLC  GKL+ A 
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K    + S +  P V  Y  L+   + +G   +AL L +EM+S GLKP 
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 154/321 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R + Q G      +FN L++   K+ R D VW++++ M      PN  T   LI 
Sbjct: 108 ALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILID 167

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A+CK G ++  + +   +  + C P +   TS+I  + +   +++   L + M  + ++ 
Sbjct: 168 AVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVA 227

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ +++   +    ++A  ++ EML +G   +   +T+ +      G+  EA  + 
Sbjct: 228 TRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIF 287

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QE  + G       +N+LI+   K+KR++E+     ++    L+P    FN ++  LC+ 
Sbjct: 288 QEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKS 347

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +L      G +P+   Y+ LI G  K G ++E  +L  EM+     P +  Y
Sbjct: 348 GRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTY 407

Query: 307 TSLISSLCQCGKLEEADKYFK 327
            +LI   C+ G++E+A + F+
Sbjct: 408 NTLIDESCKGGRIEDALRLFE 428



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 169/373 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E + +  + +E    +L+  ++N+LI    K+        +Y+ M ++   P+  T  
Sbjct: 69  LLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFN 128

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++A  K  ++ +   + + +  + CSP VI  + LI  + +   +E+ + +   M  +
Sbjct: 129 VLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSR 188

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               +   Y+ ++    K  +++ A  ++EEM   G  A   VY + I      G+ + A
Sbjct: 189 GCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAA 248

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM + GL+P   TF  L+ G   A R  E+    ++          + +N +I  
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A  +     + G  P+  T++ L+ G  K G I +   L  +M+    +P 
Sbjct: 309 LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPD 368

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y +LI  L + G++EEA +    M+S    P V  Y +L+    + G    AL L E
Sbjct: 369 VTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFE 428

Query: 363 EMVSEGLKPSTSY 375
           E+ ++G   + +Y
Sbjct: 429 EISAKGFANTVTY 441



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 147/311 (47%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L       G L+  V+ L R+ G RC+       SLI   ++    ++ + + + M +  
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  DT  +++++ A  K + ++S   ++EEM  +  S N   Y+  I A C+ G +E+A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M++ G +P   T+  +I+G  K+  ++++    E+M S  L+ +   +N +I  L
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G A  A  +    L KG  P+ +T++ L+ G    G   E  +++ E      +  +
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  LI +LC+  +L+EA + F  ++   LVP V  + +L+    + G    A  L  +
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 364 MVSEGLKPSTS 374
           M   G  P  +
Sbjct: 360 MKRAGCTPDVT 370



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 5/280 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +   G   + + +N+LIH + +S R D   ++++ ML     P+  T  +L+ 
Sbjct: 213 AFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVY 272

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L   G+      +        C+  V +   LI  + + +R++E   +   +    ++ 
Sbjct: 273 GLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVP 332

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   ++ ++    K   +  A ++  +M + G + +  VY T I    + G++EEA  L+
Sbjct: 333 DVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLL 392

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM++ G +P   T+N LI+   K  RIE++L   E++ S K   +   +N ++  LC  
Sbjct: 393 LEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEI-SAKGFANTVTYNTILNGLCMA 451

Query: 247 GNAKQA----NGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           G   +A    NGM    +D    P+ +TY+ L+ G  + G
Sbjct: 452 GRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 165/349 (47%), Gaps = 2/349 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLISALCKGGQLQTYVDM 80
           S+  F+ L+  ++K  + D+V  +++ M + +  P N  T   L++  C+  QL   +  
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++   SL+    + +RI + + +  RM+      + + Y+ I+    K
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            + +++AL +   M   G   ++  Y + I   C  G+ ++A  ++  M    + P   T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           FN LI+ C K  RI E+    E+M+ R L P    ++ +I  LC      +A  M    +
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG  P+ +TYS LI GY K  +++  +KL+ EM  + +      YT LI   C+ GKL 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            A++ FK M    + P +  Y  L+    + G   KAL +  +M   G+
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 170/359 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +++F +L++   + DR      ++  M+E    PN     T+I  LCK  Q+   
Sbjct: 146 GHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNA 205

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L+R+      P  +   SLI  +    R ++   ++  M ++ +  D   ++ ++ A
Sbjct: 206 LDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDA 265

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK   +  A  +YEEM++R    +   Y+  I   C Y +++EA  +   M + G  P 
Sbjct: 266 CVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPD 325

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI G  K+K++E  +    +M  R ++ +   +  +I+  C  G    A  +  
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFK 385

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +  G  PN ITY+ L+ G    G+I++ L +  +M+   +   +  Y  +I  +C+ G
Sbjct: 386 WMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAG 445

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++ +A   +  +    L P +  Y +++    +KG + +A  L  +M  +G+ P+  Y+
Sbjct: 446 EVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNECYV 504



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 166/336 (49%), Gaps = 3/336 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEAT 60
           R+++  +   R +E  G+  +++ +NT+I  + KS + D    +   M ++ IR P+  T
Sbjct: 166 RIYDALYMFDRMVEM-GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIR-PDAVT 223

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +LIS LC  G+      M+  +  +   P V    +LI   ++E RI E   L + M+
Sbjct: 224 YNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMI 283

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R+++  D + YSL++Y       L+ A  ++  M+ +G   +   Y+  I  YC+  K+E
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
               L  EM   G+     T+ +LI+G  +A ++  +    + M+   + P+   +N ++
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLL 403

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G  ++A  +L      G   + +TY+ +I G  K GE+ +   LY  +  K ++
Sbjct: 404 HGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLT 463

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           P +  YT+++  L + G   EAD  F+ MK   ++P
Sbjct: 464 PDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 2/292 (0%)

Query: 84  IHGKRCSPM-VIVNTSLILRIIQE-ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            H  +C P+  I + S +L  I + ++ +  + L ++M    + H+    ++++    + 
Sbjct: 70  FHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRC 129

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L  AL    +M+K G   +   + + +  +C   +I +A  +   M   G +P    +
Sbjct: 130 SQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIY 189

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+G  K+K+++ +L    +M    + P    +N +I  LC  G    A  M++    
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTK 249

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +   P+  T++ LI    KEG I E  +LY EM  +S+ P +  Y+ LI  LC   +L+E
Sbjct: 250 REIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A++ F  M S    P V  Y  L+  + +       + L  EM   G+  +T
Sbjct: 310 AEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 100/254 (39%), Gaps = 35/254 (13%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +R     + +FN LI    K  R      +Y+ M+     P+  T   LI  LC   +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     M   +  K C P V+  + LI    + +++E GM L   M ++ ++ +T+ Y++
Sbjct: 307 LDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTV 366

Query: 134 IV--YAKVKMRN---------------------------------LESALVVYEEMLKRG 158
           ++  Y +    N                                 +E ALV+  +M K G
Sbjct: 367 LIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSG 426

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
             A+   Y   I   C+ G++ +A  L   +   GL P   T+  ++ G  K     E+ 
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEAD 486

Query: 219 SYCEQMMSRKLLPS 232
           +   +M    +LP+
Sbjct: 487 ALFRKMKEDGILPN 500


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 169/350 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++NTLI  +    R      +   ML     P+  T   L+ A CK    +  + +LD +
Sbjct: 34  TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K C+P ++    ++  I QE R+++ +  LK +       +T++Y++++         
Sbjct: 94  RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 153

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  +  EM ++G   N   +   I   C  G +E A  +++++   G  P   ++N L
Sbjct: 154 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 213

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +    K K++++++++ + M+SR   P   ++N ++  LC  G    A  +L    DKG 
Sbjct: 214 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 273

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P  I+Y+ +I G  K G+ +E L+L  EM  K + P +  Y+++ + LC+  ++E+A +
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            F  ++   + P   +Y +++    ++     A+ L   M+  G  P+ S
Sbjct: 334 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 383



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 110/225 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A +V   + + G + + +S+N L+H   K  + D        M+    YP+  +  
Sbjct: 187 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 246

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALC+ G++   V++L ++  K C+P++I   ++I  + +  + +E + LL  M+ K
Sbjct: 247 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 306

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS I     +   +E A+  + ++   G   N+ +Y   I   C+  +   A
Sbjct: 307 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 366

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             L   M   G  P + T+ +LIEG A    I+E+    +++ SR
Sbjct: 367 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 3/210 (1%)

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y   +  YC  G+++ A  L+ EM    ++P   T+N LI G     R   +L+  ++
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+ R+ +P    +  ++   C+    KQA  +L    DKG +P+ +TY+ ++ G  +EG 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           + + ++    +      P   +Y  ++  LC   + E+A++    M      P V  +  
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L+     KG    AL + E++   G  P++
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNS 207


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 163/339 (48%), Gaps = 10/339 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S    + N L++ +   +R      +   +L     P+  T  TLI  LC   ++   
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD------TIAY 131
             +  R+    C+P  I   +L+  + +   I   + L + ML  + ++        I+Y
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+I+ A  K R  + A  ++EEM  +G +     YT+ I  +C  GK EEA  L  EM N
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN 305

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G++P   TFN+LI+   K  ++ E+    E M+ R ++P+   +N +I   C  G+   
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 365

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +      KG  P+ I Y+ LI GY K  +++E +KLY  M      P +  Y +L++
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLT 425

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
            L Q GK+ +A K F +MK +  +PG D+Y  + GI L 
Sbjct: 426 GLFQGGKVGDAKKLFGVMKVYG-IPG-DLY--IYGIFLN 460



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 136/285 (47%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G   ++++FN LI V+ K  +      + + M++    PN  T  +LI   C  G L 
Sbjct: 305 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 364

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           +  ++   +  K C P VI  T LI    +  ++EE M L   ML+     D   Y  ++
Sbjct: 365 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 424

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +  A  ++  M   G   + ++Y  F+   C+ G + EA  L  ++++  +K
Sbjct: 425 TGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK 484

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
              E FN LI+G  KA ++E +    E++   +L P    +N MI   C  G   +AN +
Sbjct: 485 LDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANIL 544

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                  G +P++ITY+ LI G+ +  ++++V++L + M  + +S
Sbjct: 545 FQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 160/365 (43%), Gaps = 6/365 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN-----IRY-PNEATIRTLISA 67
           +++ G + + I++ TL+  + ++    +  +++Q ML +     I + P   +   +I A
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK  +     D+ + +  +  +P VI  TSLI       + EE   L   M+ + +  +
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + +++++    K   +  A  + E M++RG   N   Y + I  +C  G +  A  L  
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            M + G +P    + +LI G  K  ++EE++     M+     P    +  ++  L + G
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 431

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               A  +  +    G   +   Y   + G  K G + E ++L+ +++  +I   +  + 
Sbjct: 432 KVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFN 491

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            LI  LC+ GKLE A + F+ +    L P V  Y  ++      G   KA  L ++M   
Sbjct: 492 CLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKN 551

Query: 368 GLKPS 372
           G  P 
Sbjct: 552 GCTPD 556



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 6/260 (2%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+  N      +++ ++    K+++      +Y +M   G S +       +   C   +
Sbjct: 87  MMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNR 146

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           + E   +M  +   G  P   T+  LI+G     RI ++     +M      P+   +  
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGT 206

Query: 239 MIRRLCECGNAKQANGMLTLALDK------GFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
           +++ LC  GN   A  +    L+        F P  I+YS +I    K+    E   L+ 
Sbjct: 207 LMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFE 266

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM+ + ++PT+ +YTSLI   C  GK EEA + F  M +  + P V  +  L+ +  ++G
Sbjct: 267 EMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG 326

Query: 353 NKAKALHLCEEMVSEGLKPS 372
              +A  L E M+  G+ P+
Sbjct: 327 KVIEAKDLLEVMIQRGIVPN 346



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 69/172 (40%), Gaps = 1/172 (0%)

Query: 197 YDETFNLLIEGCAKAK-RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           + +  ++ +  C        ++  +   MM     P  S+F  ++  L +  +  Q   +
Sbjct: 59  FQQQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYL 118

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G SP+  T + L+        + E L +   +  +   P +  YT+LI  LC 
Sbjct: 119 YNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCM 178

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
             ++ +A   F  M+     P    Y +L+      GN + AL L +EM+++
Sbjct: 179 EHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLND 230


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +++ G   SL   NT I+V+ K  + +   +  + M      P+  T  +LI 
Sbjct: 254 ALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK 313

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML-RKNMI 125
             C   +++  ++++  +  K C P  +   +++  + +E++IEE   L+++M+   N+I
Sbjct: 314 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLI 373

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ +++   K  + + AL   +E   +GF  +   Y+  + ++C+ G+++EA  L
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 433

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M + G  P   T+  +++G  +  RI+E+    +QM      P+  ++  ++  LC 
Sbjct: 434 VIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCH 493

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G + +A  M+ ++ +  ++PN ITY  ++ G  +EG++ E   L  EM  K   PT   
Sbjct: 494 SGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVE 553

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
              LI SLCQ  K+ EA KY +   +      V  + +++    + G+   AL + ++M 
Sbjct: 554 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613

Query: 366 SEGLKPST 373
             G  P  
Sbjct: 614 LSGKHPDA 621



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 171/359 (47%), Gaps = 3/359 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLISALCKGGQL 74
           Q  +S   + + T++ V++K+       R+ + M    I  P EA    ++S   + G+L
Sbjct: 193 QWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVS-YSRAGKL 251

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +  + +L  +      P + +  + I  +++  ++E+ +  L+RM    +  D + Y+ +
Sbjct: 252 RNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSL 311

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAG 193
           +     +  +E AL +   +  +G   +   Y T +G  C+  KIEE  CLM++M  N+ 
Sbjct: 312 IKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSN 371

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N LI   +K    +++L++ ++   +        ++ ++   C+ G   +A 
Sbjct: 372 LIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAK 431

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++     +G +P+ +TY+ ++ G+ + G I E  K+  +M      P   +YT+L++ L
Sbjct: 432 SLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGL 491

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  GK  EA +   + + H   P    Y +++     +G  ++A  L  EMV +G  P+
Sbjct: 492 CHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPT 550



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 163/362 (45%), Gaps = 1/362 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRT 63
           E A ++   L  +G     +S+ T++  + K  + + V  + + M+ N    P++ T  T
Sbjct: 322 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNT 381

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L K G     +  L     K      +  ++++    Q+ R++E   L+  M  + 
Sbjct: 382 LIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRG 441

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y+ IV    ++  ++ A  + ++M K G   N+  YT  +   C  GK  EA 
Sbjct: 442 CNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 501

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++   E     P   T+  ++ G  +  ++ E+     +M+ +   P+    N +I+ L
Sbjct: 502 EMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSL 561

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A   L   L+KG + N + ++ +I G+ + G+++  L +  +M      P  
Sbjct: 562 CQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDA 621

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT+L  +L + G+L+EA +    M S  L P    Y S++  + + G     L+L E+
Sbjct: 622 VTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEK 681

Query: 364 MV 365
           M+
Sbjct: 682 ML 683



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/357 (21%), Positives = 152/357 (42%), Gaps = 39/357 (10%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG +  ++++  ++    +  R D   +I Q M ++   PN  +   L++ LC  G+   
Sbjct: 440 RGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 499

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             +M++       +P  I   +++  + +E ++ E   L + M+ K      +  +L++ 
Sbjct: 500 AREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ 559

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           +  + + +  A    EE L +G + N   +TT I  +C+ G +E A  ++ +M  +G  P
Sbjct: 560 SLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHP 619

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  L +   K  R++E+     +M+S+ L P+                        
Sbjct: 620 DAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPT------------------------ 655

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                       +TY  +I  Y++ G + ++L L  +M  +   P    Y  +I  LC  
Sbjct: 656 -----------PVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDF 702

Query: 317 GKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           G LEEA+K   K++++ S V   +    L+  +L+KG    A  +   M    L P 
Sbjct: 703 GNLEEAEKLLGKVLRTASKVDA-NTCHVLMESYLKKGVAISAYKVACRMFRRNLTPD 758



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 132/279 (47%), Gaps = 8/279 (2%)

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIH---DTIAYSLIVYAKV-KMRNLESALVVYEEML 155
           +L ++ + ++ +G   + R++ +  I    +   Y ++ Y++  K+RN   AL V   M 
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRN---ALRVLTLMQ 262

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           K G   +  +  T I    + GK+E+A   ++ M+  G+KP   T+N LI+G     RIE
Sbjct: 263 KAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIE 322

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHL 274
           ++L     + S+   P   ++  ++  LC+    ++   ++  +  +    P+++TY+ L
Sbjct: 323 DALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTL 382

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I   +K G   + L    E + K        Y++++ S CQ G+++EA      M S   
Sbjct: 383 IHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGC 442

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            P V  Y ++V      G   +A  + ++M   G KP+T
Sbjct: 443 NPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNT 481


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 172/396 (43%), Gaps = 35/396 (8%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRI---------------------------- 45
            +E +G++  +IS++T+++   +    D VW++                            
Sbjct: 715  MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 774

Query: 46   -------YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
                   +  M+     P+     TLI   CK G ++        +H +  +P V+  T+
Sbjct: 775  LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834

Query: 99   LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
            +I    Q   + E   L   M  K +  D++ ++ ++    K  +++ A  V+  M++ G
Sbjct: 835  IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894

Query: 159  FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
             S N   YTT I   C+ G ++ AN L+ EM   GL+P   T+N ++ G  K+  IEE++
Sbjct: 895  CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954

Query: 219  SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                +  +  L      +  ++   C+ G   +A  +L   L KG  P  +T++ L+ G+
Sbjct: 955  KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014

Query: 279  AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
               G +++  KL   M  K I+P    + SL+   C    L+ A   +K M S  + P  
Sbjct: 1015 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 1074

Query: 339  DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              YE+LV  H +  N  +A  L +EM  +G   S S
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 1110



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 174/377 (46%), Gaps = 10/377 (2%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A  V R   + G   ++ S+N +IH V +  R      +   M      P+  +  T+++
Sbjct: 673  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              C+ G+L     +++ +  K   P   +  S+I  + +  ++ E       M+R+ ++ 
Sbjct: 733  GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            DT+ Y+ ++    K  ++ +A   + EM  R  + +   YT  I  +C+ G + EA  L 
Sbjct: 793  DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             EM   GL+P   TF  LI G  KA  ++++      M+     P+   +  +I  LC+ 
Sbjct: 853  HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            G+   AN +L      G  PN  TY+ ++ G  K G I+E +KL  E E   ++     Y
Sbjct: 913  GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972

Query: 307  TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG---IH--LEKGNKAKALHLC 361
            T+L+ + C+ G++++A +  K M    L P +  +  L+    +H  LE G K     L 
Sbjct: 973  TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK-----LL 1027

Query: 362  EEMVSEGLKPSTSYLCS 378
              M+++G+ P+ +   S
Sbjct: 1028 NWMLAKGIAPNATTFNS 1044



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 144/287 (50%)

Query: 56   PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
            P+  T   LI+  CK G ++    + + +    CSP V+  T+LI  + +E  ++    L
Sbjct: 862  PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921

Query: 116  LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            L  M +  +  +   Y+ IV    K  N+E A+ +  E    G +A++  YTT + AYC+
Sbjct: 922  LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981

Query: 176  YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             G++++A  +++EM   GL+P   TFN+L+ G      +E+       M+++ + P+ + 
Sbjct: 982  SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041

Query: 236  FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
            FN ++++ C   N K A  +      +G  P+  TY +L+ G+ K   ++E   L+ EM+
Sbjct: 1042 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101

Query: 296  YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
             K  S ++  Y+ LI    +  K  EA + F  M+   L    +I++
Sbjct: 1102 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 132/284 (46%)

Query: 17   RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
            +G     ++F  LI+   K+      +R++ HM++    PN  T  TLI  LCK G L +
Sbjct: 858  KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917

Query: 77   YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++L  +      P +    S++  + +   IEE + L+       +  DT+ Y+ ++ 
Sbjct: 918  ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977

Query: 137  AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
            A  K   ++ A  + +EML +G       +   +  +C +G +E+   L+  M   G+ P
Sbjct: 978  AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037

Query: 197  YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               TFN L++       ++ + +  + M SR + P    +  +++  C+  N K+A  + 
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097

Query: 257  TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                 KGFS +  TYS LI G+ K  +  E  +++ +M  + ++
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 1141



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 109/227 (48%)

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A++V+ E  + G   N   Y   I   C+ G+I+EA+ L+  ME  G  P   +++ ++
Sbjct: 672 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 731

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  +   +++     E M  + L P+   +  +I  LC      +A    +  + +G  
Sbjct: 732 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 791

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ + Y+ LI G+ K G+I+   K +YEM  + I+P +  YT++IS  CQ G + EA K 
Sbjct: 792 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           F  M    L P    +  L+  + + G+   A  +   M+  G  P+
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 132/286 (46%), Gaps = 42/286 (14%)

Query: 129 IAYSLI--VYAKVKMRNLESALVVYEEML---KRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +A SLI   + + K+ N+  + V + ++L    + + ++  V+  F     ++G + EA 
Sbjct: 580 VAQSLISSFWERPKL-NVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREAR 638

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKA-KRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            + ++M N GL    ++ N+ +   +K   +   ++    +     +  + +++N +I  
Sbjct: 639 RVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHF 698

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           +C+ G  K+A+ +L L   KG++P+ I+YS ++ GY + GE+ +V KL   M+ K + P 
Sbjct: 699 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 758

Query: 303 --------------------------------LP---AYTSLISSLCQCGKLEEADKYFK 327
                                           LP    YT+LI   C+ G +  A K+F 
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            M S  + P V  Y +++    + G+  +A  L  EM  +GL+P +
Sbjct: 819 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 864



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 91/217 (41%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
             E  G +   +++ TL+    KS   D    I + ML     P   T   L++  C  G 
Sbjct: 960  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019

Query: 74   LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            L+    +L+ +  K  +P      SL+ +      ++    + K M  + +  D   Y  
Sbjct: 1020 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 1079

Query: 134  IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +V    K RN++ A  +++EM  +GFS +   Y+  I  + +  K  EA  +  +M   G
Sbjct: 1080 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 1139

Query: 194  LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
            L    E F+   +   K KR +  +   ++++   L+
Sbjct: 1140 LAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1176


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 179/379 (47%), Gaps = 6/379 (1%)

Query: 11  CRYL-EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLISAL 68
           C YL +++GF  ++ + N ++ +  K +R  + W +Y  M   NIR  +  T   +I+ L
Sbjct: 168 CFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIR-SSLYTFNIMINVL 226

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK G+L+   + +  +      P V+   ++I       + +   V+ + M  K +  D 
Sbjct: 227 CKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDC 286

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
             Y+  +    K   LE A  +  +ML+ G   N+  Y   I  YC  G +++A     E
Sbjct: 287 YTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDE 346

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M + G+     T+NL I       R+ ++ +  ++M  + ++P     N +I   C CG+
Sbjct: 347 MISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD 406

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
           AK+A G+L   + KG  P  +TY+ LI    K   ++E   L+ +++ + + P +  + +
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNA 466

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI   C  G ++ A +  K M +  ++P    Y +L+  +  +G   +A  L +EM   G
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526

Query: 369 LKP---STSYLCSASTCRG 384
           +KP   S + L S  + RG
Sbjct: 527 IKPDHISYNTLISGYSKRG 545



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 166/354 (46%), Gaps = 6/354 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SL +FN +I+V+ K  +         HM      PN  T  T+I   C  G+ Q    + 
Sbjct: 215 SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIF 274

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K   P      S I  + +E R+EE   L+ +ML   ++ + + Y+ ++      
Sbjct: 275 QTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNK 334

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L+ A    +EM+ +G  A+   Y  FI A    G++ +A+ +++EM   G+ P   T 
Sbjct: 335 GDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTH 394

Query: 202 NLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           N+LI G   C  AKR   +    ++M+ + + P+   +  +I  L +    K+A+ + + 
Sbjct: 395 NILINGYCRCGDAKR---AFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSK 451

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              +G  P+ I ++ LI G+   G I    +L  EM+   + P    Y +L+   C+ GK
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK 511

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +EEA +    MK   + P    Y +L+  + ++G+   A  + +EM++ G  P+
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 172/362 (47%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++E  G   +++++NT+IH      +      I+Q M +    P+  T  + IS LCK G
Sbjct: 241 HMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEG 300

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L+    ++ ++      P  +   +LI     +  +++       M+ K ++   + Y+
Sbjct: 301 RLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYN 360

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           L ++A      +  A  + +EM ++G   ++  +   I  YC  G  + A  L+ EM   
Sbjct: 361 LFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK 420

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G++P   T+  LI    K  R++E+ +   ++    LLP    FN +I   C  GN  +A
Sbjct: 421 GIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRA 480

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L    +    P+EITY+ L+ GY +EG+++E  +L  EM+ + I P   +Y +LIS 
Sbjct: 481 FQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISG 540

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + G +++A +    M +    P +  Y +L+    +      A  L +EMVS+G+ P 
Sbjct: 541 YSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD 600

Query: 373 TS 374
            S
Sbjct: 601 DS 602



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 160/342 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  + + ++ +G      ++N+ I  + K  R +    +   MLE    PN  T   
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNA 326

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C  G L       D +  K     ++     I  +  E R+ +   ++K M  K 
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           M+ D + +++++    +  + + A  + +EM+ +G       YT+ I    +  +++EA+
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  +++  GL P    FN LI+G      I+ +    ++M + K+LP    +N +++  
Sbjct: 447 ALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGY 506

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G  ++A  +L     +G  P+ I+Y+ LI GY+K G++++  ++  EM      PT+
Sbjct: 507 CREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTI 566

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             Y +LI  LC+  + E A++  K M S  + P    Y S++
Sbjct: 567 LTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 35/307 (11%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   SL+++N  IH +    R      + + M E    P+  T   LI+  C+ G  + 
Sbjct: 350 KGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKR 409

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +LD + GK   P ++  TSL                                   +Y
Sbjct: 410 AFGLLDEMVGKGIQPTLVTYTSL-----------------------------------IY 434

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   ++ A  ++ ++ + G   +  V+   I  +C  G I+ A  L++EM+N  + P
Sbjct: 435 VLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLP 494

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
            + T+N L++G  +  ++EE+    ++M  R + P   ++N +I    + G+ K A  + 
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVR 554

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +  GF P  +TY+ LI G  K  E +   +L  EM  K I+P    Y S+I ++   
Sbjct: 555 DEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETV 614

Query: 317 GKLEEAD 323
             LE  D
Sbjct: 615 DDLEGND 621



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 98/213 (46%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           +  + ++   + AYCE  K  EA      ++  G  P  ET N ++    K  R + +  
Sbjct: 143 AKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
              +M    +  S   FN MI  LC+ G  K+A   +      G  PN +TY+ +I G+ 
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
             G+ Q    ++  M+ K + P    Y S IS LC+ G+LEEA      M    LVP   
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +L+  +  KG+  KA    +EM+S+G+  S
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMAS 355



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 109/245 (44%)

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           T+ + L+V A  +++    AL  +  + ++GF  N       +  + +  + + A  L  
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM    ++    TFN++I    K  +++++  +   M +  + P+   +N +I   C  G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             ++A  +     DKG  P+  TY+  I G  KEG ++E   L  +M    + P    Y 
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +LI   C  G L++A  Y   M S  ++  +  Y   +     +G    A ++ +EM  +
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 368 GLKPS 372
           G+ P 
Sbjct: 386 GMMPD 390


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 186/368 (50%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A+++ + + + G  +++ + N +I+ + K+ + +        M E   +P+  T  TL
Sbjct: 340 DLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTL 399

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+A C+ G L+   +++D + GK   P V    ++I  + +  +      +L  ML+  M
Sbjct: 400 INAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGM 459

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DT  Y++++    +  N+  A  +++EM  +G   +   ++  IG   + G +++A  
Sbjct: 460 SPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALK 519

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             ++M+NAGL P +  + +LI G  +   + E+L   ++M+ +        +N ++  LC
Sbjct: 520 YFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLC 579

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A+ + T   ++G  P+  T++ LI GY K+G + + + L+  M  +++ P + 
Sbjct: 580 KEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVV 639

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI   C+  ++E+ ++ +  M S  + P    Y  L+  +   G  ++A  L +EM
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699

Query: 365 VSEGLKPS 372
           V +G + +
Sbjct: 700 VEKGFEAT 707



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 168/362 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G    L+SF+ LI +++K+   D   + ++ M      P+      LI   C+ G 
Sbjct: 489 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 548

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + + D +  + C   V+   +++  + +E+ + E   L   M  + +  D   ++ 
Sbjct: 549 MSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT 608

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  N+  A+ ++E M++R    +   Y T I  +C+  ++E+ N L  +M +  
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++ +LI G      + E+    ++M+ +    +    N +++  C  GNA +A+
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 728

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             L+  L KG  P+ ITY+ LI G+ KE  +     L  +ME   + P +  Y  +++  
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G+++EA+     M    + P    Y SL+  H+ + N  +A  + +EM+  G  P  
Sbjct: 789 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848

Query: 374 SY 375
            +
Sbjct: 849 KF 850



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 169/370 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF++   +  +G    + ++N +I+ + K+ +      +   ML+    P+ AT  
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   C+   +     + D +  +   P ++  ++LI  + +   +++ +   + M   
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y++++    +   +  AL V +EML++G   +   Y T +   C+   + EA
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  EM   G+ P   TF  LI G  K   + ++++  E M+ R L P    +N +I  
Sbjct: 588 DELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 647

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+    ++ N +    + +   PN I+Y  LI GY   G + E  +L+ EM  K    T
Sbjct: 648 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 707

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +    +++   C+ G   +AD++   M    +VP    Y +L+   +++ N  +A  L  
Sbjct: 708 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 767

Query: 363 EMVSEGLKPS 372
           +M + GL P 
Sbjct: 768 KMENSGLLPD 777



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 18/350 (5%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  SL SF+ +IH++ +S R      +   M+          + +L+      G      
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           D+L R +                  +Q  ++ EG    + +  K +     A + ++   
Sbjct: 292 DLLVRTY------------------VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGL 333

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           VK+  ++ A  +Y+E+++ G   N +     I A C+  KIE     + +ME  G+ P  
Sbjct: 334 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 393

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N LI    +   +EE+    + M  + L P    +N +I  LC+ G   +A G+L  
Sbjct: 394 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 453

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L  G SP+  TY+ L+    +   + +  +++ EM  + + P L ++++LI  L + G 
Sbjct: 454 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 513

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L++A KYF+ MK+  L P   IY  L+G     G  ++AL + +EM+ +G
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 130/294 (44%), Gaps = 17/294 (5%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIH-----------------DTIAYSLIVYAKV 139
           +++I  +++  R+ +   ++ RM+RK+ +                  + + + L+V   V
Sbjct: 240 SAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYV 299

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           + R L      +  +  +G   +     + +G   + G ++ A  + QE+  +G++    
Sbjct: 300 QARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVY 359

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T N++I    K ++IE + S+   M  + + P    +N +I   C  G  ++A  ++   
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 419

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             KG  P   TY+ +I G  K G+      +  EM    +SP    Y  L+   C+   +
Sbjct: 420 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 479

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +A++ F  M S  +VP +  + +L+G+  + G   +AL    +M + GL P  
Sbjct: 480 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 533



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 20/253 (7%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEE 181
           N  H   ++S +++  V+ R L  A  V   M+++ G S                 ++E 
Sbjct: 231 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVS-----------------RVEI 273

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              L+    N G  P    F+LL+    +A+++ E       + S+ L  S +A N ++ 
Sbjct: 274 VESLVLTYGNCGSNPL--VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLG 331

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L + G    A  +    +  G   N  T + +I    K  +I+       +ME K + P
Sbjct: 332 GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP 391

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI++ C+ G LEEA +    M    L P V  Y +++    + G   +A  + 
Sbjct: 392 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 451

Query: 362 EEMVSEGLKPSTS 374
           +EM+  G+ P T+
Sbjct: 452 DEMLKIGMSPDTA 464


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 166/344 (48%), Gaps = 4/344 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R    ++++FNTLI  + ++   D V  +Y+ M +    P+  T   LI   C+ G+++
Sbjct: 213 RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRME 272

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V M + +     +P  +V T+LI    +E  +  GM L + M  + ++ D +AY+ +V
Sbjct: 273 NAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALV 332

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               + RNL++A  + EEM   G   +   YTT I   C+ GK++ A  + Q+M    + 
Sbjct: 333 NGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVS 392

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
             + T+  LI G +KA R  ++     +MM   L P  + +  +I   C  G+ K    +
Sbjct: 393 LDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKL 452

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L    +KG  P  +TY+ ++ G  K G+++    L + M    +SP    Y  L+   C+
Sbjct: 453 LKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCK 512

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            GK+  ++   ++  S  +VP   +Y SL+   L K   AK  H
Sbjct: 513 HGKVANSE---ELESSKGMVPDFAVYTSLIS-ELAKKKPAKNYH 552



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 166/366 (45%), Gaps = 13/366 (3%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
            D     E R F++ +  F  L  +V+         +++  M  +++ P   T  TLIS 
Sbjct: 178 LDAGMAPETRLFNVLMRDFVRLGELVS-------ARKVFDEMRRSVQ-PTVVTFNTLISG 229

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           +C+   L     +   +      P V    +LI    +  R+E  + +   M    +  +
Sbjct: 230 MCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPN 289

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + ++ ++ A  K  N+ + + +Y++M  RG   +   Y   +   C    ++ A  +++
Sbjct: 290 AVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVE 349

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM+NAGLKP   T+  LI+GC K  +++ ++   ++M  +++      +  +I  L + G
Sbjct: 350 EMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAG 409

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               A  +L   ++    P+  TY+ +I  + ++G+++   KL  EM+ K   P +  Y 
Sbjct: 410 RPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYN 469

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM-VS 366
            +++ LC+ G+++ AD     M +  + P    Y  L+    + G  A +    EE+  S
Sbjct: 470 VIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANS----EELESS 525

Query: 367 EGLKPS 372
           +G+ P 
Sbjct: 526 KGMVPD 531



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 157/357 (43%), Gaps = 4/357 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG SL     + L+  +  +      +  Y  +L+    P       L+    + G+L 
Sbjct: 147 RRGISLPAPVCSGLMSRLPSTPE---AYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELV 203

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           +   + D +  +   P V+   +LI  + +   ++    L K M    +  D   Y  ++
Sbjct: 204 SARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALI 262

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +E+A+ ++ EM   G + N+ V+TT I A+C+ G +     L Q+M   G+ 
Sbjct: 263 KGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N L+ G  +A+ ++ + S  E+M +  L P    +  +I   C+ G    A  +
Sbjct: 323 PDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                +K  S +E+TY+ LI G +K G   +  ++  EM   ++ P    YT +I + C+
Sbjct: 383 KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCR 442

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G ++   K  K M++    PGV  Y  ++    + G    A  L   M++ G+ P 
Sbjct: 443 KGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPD 499



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 38/312 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +   G + + + F TLI    K    +    +YQ M      P+      
Sbjct: 271 MENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNA 330

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++ LC+   L+    +++ +      P  +  T+LI    ++ +++  M + ++M  K 
Sbjct: 331 LVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKE 390

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ ++    K      A  V  EM++     ++  YT  I A+C  G ++   
Sbjct: 391 VSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGF 450

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM+N G KP   T+N+++ G                                   L
Sbjct: 451 KLLKEMQNKGKKPGVVTYNVIMNG-----------------------------------L 475

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  K A+ +L   L+ G SP++ITY+ L+ G  K G++    +L      K + P  
Sbjct: 476 CKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELE---SSKGMVPDF 532

Query: 304 PAYTSLISSLCQ 315
             YTSLIS L +
Sbjct: 533 AVYTSLISELAK 544



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 118/247 (47%), Gaps = 5/247 (2%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
              D+ + +  RG    L+++N L++ + ++        I + M      P++ T  TLI
Sbjct: 308 AGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLI 367

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK G+L   +D+  ++  K  S   +  T+LI  + +  R  +   +L+ M+   + 
Sbjct: 368 DGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALE 427

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   Y++++ A  +  ++++   + +EM  +G       Y   +   C+ G+++ A+ L
Sbjct: 428 PDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADML 487

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK-LLPSCSAFNEMIRRLC 244
           +  M N G+ P D T+N+L++G  K  ++  S    E++ S K ++P  + +  +I  L 
Sbjct: 488 LHAMLNIGVSPDDITYNILLDGQCKHGKVANS----EELESSKGMVPDFAVYTSLISELA 543

Query: 245 ECGNAKQ 251
           +   AK 
Sbjct: 544 KKKPAKN 550


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 172/363 (47%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R+  +R       + +TLI  +    R      +   ML     P+  T   L+ A CK 
Sbjct: 149 RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 208

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
              +  + +LD +  K C+P ++    ++  I QE R+++ +  LK +       +T++Y
Sbjct: 209 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 268

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++         E A  +  EM ++G   N   +   I   C  G +E A  +++++  
Sbjct: 269 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 328

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G  P   ++N L+    K K++++++++ + M+SR   P   ++N ++  LC  G    
Sbjct: 329 YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 388

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L    DKG +P  I+Y+ +I G  K G+ +E L+L  EM  K + P +  Y+++ +
Sbjct: 389 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 448

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+  ++E+A + F  ++   + P   +Y +++    ++     A+ L   M+  G  P
Sbjct: 449 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 508

Query: 372 STS 374
           + S
Sbjct: 509 NES 511



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 110/225 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A +V   + + G S + +S+N L+H   K  + D        M+    YP+  +  
Sbjct: 315 LVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 374

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALC+ G++   V++L ++  K C+P++I   ++I  + +  + +E + LL  M+ K
Sbjct: 375 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 434

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS I     +   +E A+  + ++   G   N+ +Y   I   C+  +   A
Sbjct: 435 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 494

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             L   M   G  P + T+ +LIEG A    I+E+    +++ SR
Sbjct: 495 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 35/189 (18%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA ++   L+ +G +  LIS+NT+I  +TK+ +      +   M+     P+  T  T+
Sbjct: 387 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 446

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            + LC+                                   E+RIE+ +    ++    +
Sbjct: 447 AAGLCR-----------------------------------EDRIEDAIRAFGKVQDMGI 471

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +T+ Y+ I+    K R   SA+ ++  M+  G   N   YT  I      G I+EA  
Sbjct: 472 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARD 531

Query: 185 LMQEMENAG 193
           L+ E+ + G
Sbjct: 532 LLDELCSRG 540


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 174/353 (49%), Gaps = 3/353 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    +I F  LI  + K  +     ++   M++    PN  T   LI++LCK G 
Sbjct: 219 MSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGS 278

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI--HDTIAY 131
           ++  + +   +  K  +P V+   +LI  +     ++E M  L+ M++ + +   D + +
Sbjct: 279 VREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTF 338

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +++   K+  +  A+ V E M +RG   N   Y   IG +    K++ A  LM E+  
Sbjct: 339 NSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAI 398

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           +GL+P   T+++LI G +K   ++ +  +   M  R +      +  ++  +C+ G  ++
Sbjct: 399 SGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMER 458

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A G+    +DK    + I YS +I G  K G+++ V +L  +M  + ++P    Y+ LI+
Sbjct: 459 AMGLFN-EMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLIN 517

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
              + G LEEA++  K M +   VP V +++SL+  +  +G   K L L  EM
Sbjct: 518 MYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEM 570



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 165/343 (48%), Gaps = 2/343 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S+ T++  +  S R      + + M  +    +  T  TLI  LC   +L   +++LD 
Sbjct: 124 VSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDE 183

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + G    P V+V + L+    +  R ++   + + M R+ +  D I ++ ++    K   
Sbjct: 184 MCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGK 243

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              A  V + M++RG   N   Y   I + C+ G + EA  L +EM++ G+ P   T+N 
Sbjct: 244 TGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNT 303

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLL--PSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           LI G +    ++E++S+ E+M+    +  P    FN +I  LC+ G   QA  +  +  +
Sbjct: 304 LIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAE 363

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G   N +TY++LIGG+ +  +++  + L  E+    + P    Y+ LI+   +  +++ 
Sbjct: 364 RGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDR 423

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A+K+   M+   +   +  Y  L+    ++G   +A+ L  EM
Sbjct: 424 AEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM 466



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 157/332 (47%), Gaps = 11/332 (3%)

Query: 50  LENIRYPNEATIRTLISALCKGG-----QLQTY-VDMLDRIHGKRCSPMVIVNTSLILRI 103
           L ++R  +  +  T+++ALC+ G     Q ++  VDM    H     P  +  T+++  +
Sbjct: 77  LPDVR--DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAH-PAARPNAVSYTTVMRGL 133

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
               R  E + LL+ M    +  D + Y  ++        L++AL + +EM   G   N 
Sbjct: 134 CASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNV 193

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
            VY+  +  YC  G+ ++   + ++M   G+KP    F  LI+   K  +  ++    + 
Sbjct: 194 VVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDM 253

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+ R L P+   +N +I  LC+ G+ ++A  +     DKG +P+ +TY+ LI G +   E
Sbjct: 254 MVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLE 313

Query: 284 IQEVLKLYYEMEYKS--ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           + E +    EM      + P +  + S+I  LC+ G++ +A K  ++M     +  +  Y
Sbjct: 314 MDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+G  L       A++L +E+   GL+P +
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDS 405



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/369 (22%), Positives = 164/369 (44%), Gaps = 3/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++  G    ++++ TLI  +  +   D    +   M  +   PN      L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+ Q    + + +  +   P VI+ T LI  + +E +  +   +   M+++ +  
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++++ +  K  ++  AL + +EM  +G + +   Y T I       +++EA   +
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 187 QEM--ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +EM   +  ++P   TFN +I G  K  R+ +++   E M  R  + +   +N +I    
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                K A  ++      G  P+  TYS LI G++K  E+    K    M  + I   L 
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELF 441

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  L++++CQ G +E A   F  M  +  +  +  Y +++    + G+      L ++M
Sbjct: 442 HYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAI-AYSTMIHGACKSGDMKTVKQLIQDM 500

Query: 365 VSEGLKPST 373
           + EGL P  
Sbjct: 501 LDEGLAPDA 509



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/235 (20%), Positives = 105/235 (44%), Gaps = 1/235 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + +RG   +L+++N LI    +  +  +   +   +  +   P+  T   LI+
Sbjct: 354 AVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILIN 413

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K  ++      L  +  +     +     L+  + Q+  +E  M L   M  KN   
Sbjct: 414 GFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGL 472

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D IAYS +++   K  ++++   + ++ML  G + ++  Y+  I  Y + G +EEA  ++
Sbjct: 473 DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVL 532

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           ++M  +G  P    F+ LI+G +   + ++ L    +M ++ +       + +IR
Sbjct: 533 KQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 164/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+ T+IH   K       + ++  ML++   PN  T  ++I  LCK   +     +L
Sbjct: 251 NVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVL 310

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  +   P      SLI   +   +  E + +LK M R     + + YS+++    K 
Sbjct: 311 QQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKS 370

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  ++  M++ G   N+  Y + +  Y   G + + N +   M   G++P    F
Sbjct: 371 GLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVF 430

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+ I    K  R++E+     +M  +  +P   A+  +I  LC+ G    A       +D
Sbjct: 431 NIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMID 490

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+ IT++ LI G+A  G+ ++  +L+YEM  + I P +  + S+I  L + GK+ E
Sbjct: 491 DGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTE 550

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A K F +M      P V  Y +++  +   G   + + L ++M+  GLKP+
Sbjct: 551 ARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 601



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 3/366 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           + G     ++F  L+  +    R +D +  + + M E    P+  +  TL+  LC   + 
Sbjct: 172 KTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKC 231

Query: 75  QTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +   +++  +   G  C P V+  T++I    +E  + +   L  +ML   +  + +  +
Sbjct: 232 EEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCN 291

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K++ ++ A  V ++M+      N   Y + I  Y   G+  EA  +++EM   
Sbjct: 292 SVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD 351

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   T+++LI+   K+    E+      M+     P+ S +  ++      GN    
Sbjct: 352 GQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDM 411

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           N +  L +  G  P    ++  I  Y K G + E    + +M+ +   P + AYT++I  
Sbjct: 412 NNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDG 471

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+ G+L++A   F  M    L P +  + +L+      G   KA  L  EM+  G+ P+
Sbjct: 472 LCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPN 531

Query: 373 TSYLCS 378
            +   S
Sbjct: 532 VNTFNS 537



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 153/362 (42%), Gaps = 17/362 (4%)

Query: 11  CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           C+ L+  G   ++++ N++I  + K    D    + Q M++    PN  T  +LI     
Sbjct: 276 CKMLDH-GIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLS 334

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            GQ    V +L  +      P V+  + LI  + +     E   +   M++     +   
Sbjct: 335 SGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNAST 394

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y  +++      NL     V + M++ G      V+   I AYC+ G+++EA+    +M+
Sbjct: 395 YGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQ 454

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P    +  +I+G  K  R+++++S   QM+   L P    FN +I      G  +
Sbjct: 455 QQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWE 514

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +    +D+G  PN  T++ +I    KEG++ E  KL+  M      P + +Y ++I
Sbjct: 515 KAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMI 574

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
                 G++ E  K    M    L P    + +L+                + MVS GLK
Sbjct: 575 HGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL----------------DGMVSMGLK 618

Query: 371 PS 372
           P 
Sbjct: 619 PD 620



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 16/214 (7%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++Q+GF   ++++ T+I  + K  R D     +  M+++   P+  T  TLI      G+
Sbjct: 453 MQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK 512

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +   ++   +  +   P V    S+I ++ +E ++ E   L   M R     + ++Y+ 
Sbjct: 513 WEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNT 572

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++       +   + + ++ML  G    +  +                N L+  M + G
Sbjct: 573 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTF----------------NTLLDGMVSMG 616

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           LKP   T   LI+ C +  RIE+ L+   +M+ +
Sbjct: 617 LKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGK 650



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           ++K+ P  + F  +I   C+ G        L   +  G     +T++ L+     E    
Sbjct: 137 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTS 196

Query: 286 EVLKLYY-EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM--KSHSLVPGVDIYE 342
           + + +    M     +P + +YT+L+  LC   K EEA +   +M     +  P V  Y 
Sbjct: 197 DAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYT 256

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +++    ++G+  KA  L  +M+  G+ P+
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPN 286


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 167/354 (47%), Gaps = 9/354 (2%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT----YVD 79
           I+++TLI+   K+      +R+   M +    P+ A   T+I  LC  G++ +    Y D
Sbjct: 34  ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 93

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           M      + C+P VI  T L+  + +  RI +  ++L+ M+      + + Y+ ++    
Sbjct: 94  M-----QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K+ N++ A+V++ +ML+   S + F Y   I  YC+  + ++   L+QEM   G +P   
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N L++   K+ +  ++ +  + M+ R   PS   FN MI   C+ G    A  +  L 
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
            D+G  P+  TY+ +I G  +   I +  +L   M      P +  Y S++S LC+  ++
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +EA + ++++++      V    +L+    +      A  L  EM   G  P  
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 382



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 166/354 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QR  + S+I++  L+  + KS R      I + M+E    PN  T  TLI+  CK G + 
Sbjct: 95  QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 154

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V + +++    CSP V     LI    ++ER ++G  LL+ M++     + I Y+ ++
Sbjct: 155 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 214

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            + VK      A  + + ML+R    + F +   I  +C+ G+++ A  L Q M + G  
Sbjct: 215 DSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCL 274

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N++I G  +A RI+++    E+M      P    +N ++  LC+     +A  +
Sbjct: 275 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 334

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             +  + G+  + +T S LI G  K   + +  KL  EME    +P + AYT LI   C+
Sbjct: 335 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 394

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             +L+++  +F  M     VP V  Y  ++    +         L + M+  G+
Sbjct: 395 ADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 139/324 (42%), Gaps = 8/324 (2%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+SA  +  + Q   D+        CSP  I  ++LI    +    ++   LL  M ++ 
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++     Y+ I+        ++SALV Y +M +R  + +   YT  + A C+  +I +A+
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDAS 122

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++++M  AG  P   T+N LI G  K   ++E++    QM+     P    +N +I   
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+    +    +L   +  G  PN ITY+ L+    K G+  +   L   M  +   P+ 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +  +I   C+ G+L+ A + F++M     +P +  Y  ++           A  L E 
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 364 MVSEGLKPS-------TSYLCSAS 380
           M   G  P         S LC AS
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKAS 326



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 105/221 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++ + + +R    S  +FN +I +  K  + DL + ++Q M +    P+  T   +IS
Sbjct: 226 AFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMIS 285

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+  ++     +L+R+    C P V+   S++  + +  +++E   + + +       
Sbjct: 286 GACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFL 345

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +  S ++    K R L+ A  +  EM + G + +   YT  I  +C+  +++++    
Sbjct: 346 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 405

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
            EM + G  P   T++++I+   K+ R+ +     + M+ R
Sbjct: 406 SEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 446



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 93/191 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++A+++ + +  RG    + ++N +I    +++R D   ++ + M E    P+  T  +
Sbjct: 258 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 317

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++S LCK  Q+    ++ + +        V+  ++LI  + +  R+++   LL+ M R  
Sbjct: 318 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 377

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D +AY+++++   K   L+ +L  + EML +G       Y+  I   C+  ++ +  
Sbjct: 378 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 437

Query: 184 CLMQEMENAGL 194
            L++ M   G+
Sbjct: 438 MLLKTMLERGV 448


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 175/369 (47%), Gaps = 2/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D  R +  +  +  + +++TL++ + K  R D    +   M      PN  T   LI 
Sbjct: 193 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 252

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL K G L     ++D +  K C P  +   +LI  +  + ++++ + LL++M+    + 
Sbjct: 253 ALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 312

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y  I+   VK R  E  + +   M +RG  AN ++Y++ I    + GK E A  L 
Sbjct: 313 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 372

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G KP    +   I+G  + ++ +E+    ++M+S+  LP+   ++ +++   + 
Sbjct: 373 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 432

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G++++A  +    + +    N +  S L+ G  + G ++E L ++  M  + + P + AY
Sbjct: 433 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 492

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV--PGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +S+I  LC  G +++  K F  M+       P V  Y  L      + N  +A+ L   M
Sbjct: 493 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552

Query: 365 VSEGLKPST 373
           + EG  P +
Sbjct: 553 LDEGCDPDS 561



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 161/349 (46%), Gaps = 38/349 (10%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHML-ENIR--YPNEATIRTLISALCKGGQLQTYVDML 81
           SFN++++V+ +       ++ Y H+   N +   PN  T   +I ALCK GQ+   VD  
Sbjct: 138 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 197

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K C+P V   ++L+  + +E R++E + LL  M  +  + + + +++++ A  K 
Sbjct: 198 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 257

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L  A  + + M  +G   N   Y T I   C  GK+++A  L+++M ++   P   T+
Sbjct: 258 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 317

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I G  K +R E+ +     M  R                                  
Sbjct: 318 GTIINGLVKQRRAEDGVHILMSMEER---------------------------------- 343

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G   NE  YS LI G  KEG+ +  ++L+ EM  K   P +  Y + I  LC+  K +E
Sbjct: 344 -GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 402

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           A+   + M S   +P    Y SL+    +KG+  KA+ + +EM+S+ ++
Sbjct: 403 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMR 451



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 8/252 (3%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ T+I+ + K  R +    I   M E  +  NE    +LIS L K G+ +  V +   
Sbjct: 315 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKE 374

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C P V+V  + I  + ++E+ +E   +L+ ML K  + +   YS ++    K  +
Sbjct: 375 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 434

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            + A++V++EM+ +    N    +  +   CE G++ EA  +   M   GLKP    ++ 
Sbjct: 435 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 494

Query: 204 LIEGCAKAKRIEESLSY-----CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           +I+G      +++ L       C++  SR   P    +N +   LC   N  +A  +L  
Sbjct: 495 MIKGLCDVGSVDKGLKLFYEMQCQEPKSR---PDVVTYNILFNALCRQDNLTRAIDLLNS 551

Query: 259 ALDKGFSPNEIT 270
            LD+G  P+ +T
Sbjct: 552 MLDEGCDPDSLT 563



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/290 (20%), Positives = 114/290 (39%), Gaps = 58/290 (20%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+RG   +   +++LI  + K  +++   R+++ M E    PN       I  LC+  +
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                D+L  +  K   P     +SL+    ++   ++ +++ K M+ ++M H+ +  S+
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME--N 191
           ++    +   L  AL V+  ML  G   +   Y++ I   C+ G +++   L  EM+   
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 519

Query: 192 AGLKPYDETFNLLI---------------------EGCA--------------------- 209
              +P   T+N+L                      EGC                      
Sbjct: 520 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQ 579

Query: 210 --------------KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
                         K +R   +L   E+M+ R L P  S ++ +I+R C+
Sbjct: 580 DGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCK 629


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 185/371 (49%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            A  + R +EQ      ++ + ++I  + K  +    + ++  M+     P+  T  +L+
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            ALC   + +    +L+++   +  P V++ ++++  + +E ++ E   ++  M+++ + 
Sbjct: 248 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ ++        ++ A+ V++ M+++GF+ +   YTT I  YC+  KI++A  L
Sbjct: 308 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 367

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            +EM      P  +T+N L+ G     R++++++   +M++R  +P    ++ ++  LC+
Sbjct: 368 FEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 427

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             + ++A  +L        +P+   Y+ +I G  + GE++    L+  +  K + P++  
Sbjct: 428 NRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWT 487

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  +I  LC+ G L EA+K F  M  +   P    Y ++    L+     +A+ L EEM+
Sbjct: 488 YNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEML 547

Query: 366 SEGLKPSTSYL 376
           + G    + +L
Sbjct: 548 ARGFSADSCFL 558



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 171/367 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G      +F TLI  +    +      ++  M++    PN  T  TLI+
Sbjct: 119 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLIN 178

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G     + +L  +    C P V++ TS+I  + ++ ++ E   L  +M+ + +  
Sbjct: 179 GLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP 238

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ +V+A   +   +    +  +M+      +  +++T + A C+ GK+ EA+ ++
Sbjct: 239 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 298

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G++P   T+  L++G      ++E++   + M+ +   P   ++  +I   C+ 
Sbjct: 299 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +      K + P+  TY+ L+ G    G +Q+ + L++EM  +   P L  Y
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+ SLC+   LEEA    K +++ +L P + +Y  ++      G    A  L   + S
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478

Query: 367 EGLKPST 373
           +GL PS 
Sbjct: 479 KGLHPSV 485



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/358 (20%), Positives = 150/358 (41%), Gaps = 10/358 (2%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q  F    + FNTL   ++  +R          +L     P+      L++++ K     
Sbjct: 33  QNNFHSKSLHFNTLDDALSSFNR----------LLHMHPPPSIVDFAKLLTSIAKMKHYS 82

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           T + +  ++      P V     LI       R+     +L ++L+     D   ++ ++
Sbjct: 83  TVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLI 142

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   +  AL ++++M+  GF  N   Y T I   C+ G    A  L++ ME    +
Sbjct: 143 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 202

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  +I+   K +++ E+ +   QM+ + + P    +  ++  LC     K    +
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 262

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   ++    P+ + +S ++    KEG++ E  ++   M  + + P +  YT+L+   C 
Sbjct: 263 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCL 322

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +++EA K F +M      P V  Y +L+  + +     KA++L EEM  +   P T
Sbjct: 323 QSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 175/369 (47%), Gaps = 2/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D  R +  +  +  + +++TL++ + K  R D    +   M      PN  T   LI 
Sbjct: 217 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 276

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL K G L     ++D +  K C P  +   +LI  +  + ++++ + LL++M+    + 
Sbjct: 277 ALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 336

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y  I+   VK R  E  + +   M +RG  AN ++Y++ I    + GK E A  L 
Sbjct: 337 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 396

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G KP    +   I+G  + ++ +E+    ++M+S+  LP+   ++ +++   + 
Sbjct: 397 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 456

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G++++A  +    + +    N +  S L+ G  + G ++E L ++  M  + + P + AY
Sbjct: 457 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 516

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV--PGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +S+I  LC  G +++  K F  M+       P V  Y  L      + N  +A+ L   M
Sbjct: 517 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576

Query: 365 VSEGLKPST 373
           + EG  P +
Sbjct: 577 LDEGCDPDS 585



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 161/349 (46%), Gaps = 38/349 (10%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHML-ENIR--YPNEATIRTLISALCKGGQLQTYVDML 81
           SFN++++V+ +       ++ Y H+   N +   PN  T   +I ALCK GQ+   VD  
Sbjct: 162 SFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTF 221

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K C+P V   ++L+  + +E R++E + LL  M  +  + + + +++++ A  K 
Sbjct: 222 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 281

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L  A  + + M  +G   N   Y T I   C  GK+++A  L+++M ++   P   T+
Sbjct: 282 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 341

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I G  K +R E+ +     M  R                                  
Sbjct: 342 GTIINGLVKQRRAEDGVHILMSMEER---------------------------------- 367

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G   NE  YS LI G  KEG+ +  ++L+ EM  K   P +  Y + I  LC+  K +E
Sbjct: 368 -GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 426

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           A+   + M S   +P    Y SL+    +KG+  KA+ + +EM+S+ ++
Sbjct: 427 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMR 475



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 8/252 (3%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ T+I+ + K  R +    I   M E  +  NE    +LIS L K G+ +  V +   
Sbjct: 339 VTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKE 398

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C P V+V  + I  + ++E+ +E   +L+ ML K  + +   YS ++    K  +
Sbjct: 399 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 458

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            + A++V++EM+ +    N    +  +   CE G++ EA  +   M   GLKP    ++ 
Sbjct: 459 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 518

Query: 204 LIEGCAKAKRIEESLSY-----CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           +I+G      +++ L       C++  SR   P    +N +   LC   N  +A  +L  
Sbjct: 519 MIKGLCDVGSVDKGLKLFYEMQCQEPKSR---PDVVTYNILFNALCRQDNLTRAIDLLNS 575

Query: 259 ALDKGFSPNEIT 270
            LD+G  P+ +T
Sbjct: 576 MLDEGCDPDSLT 587



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/290 (20%), Positives = 114/290 (39%), Gaps = 58/290 (20%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+RG   +   +++LI  + K  +++   R+++ M E    PN       I  LC+  +
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                D+L  +  K   P     +SL+    ++   ++ +++ K M+ ++M H+ +  S+
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME--N 191
           ++    +   L  AL V+  ML  G   +   Y++ I   C+ G +++   L  EM+   
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 543

Query: 192 AGLKPYDETFNLLI---------------------EGCA--------------------- 209
              +P   T+N+L                      EGC                      
Sbjct: 544 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQ 603

Query: 210 --------------KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
                         K +R   +L   E+M+ R L P  S ++ +I+R C+
Sbjct: 604 DGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCK 653


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 159/320 (49%), Gaps = 2/320 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  +  TLI+ LCK  +L+  V +L  +    C P  +  T+L+  + ++ R++E M L
Sbjct: 31  PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 90

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ M +K    D + Y  ++       NL+    +++EML +G SAN   Y+  +   C 
Sbjct: 91  LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 150

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ +EAN ++  M   G+ P   T+  LI+G  K  R   ++     M+ +   PS   
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM- 294
           +N ++  LC+ G    A  +L + ++KG   + +TY+ L+ G   +G++ E LKL+  M 
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270

Query: 295 -EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
                + P +  +  LI  LC+ G+L +A K  + M        +  Y  L+G  L+ G 
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330

Query: 354 KAKALHLCEEMVSEGLKPST 373
             +A+ L ++++  G  P++
Sbjct: 331 IKEAMELWKQVLDLGFVPNS 350



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 158/324 (48%), Gaps = 14/324 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML--ENIRYPNEATIRTL 64
           AF + R + ++G    ++++NTL+  +    + D   +++  M   EN   PN  T   L
Sbjct: 227 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286

Query: 65  ISALCKGGQLQTYVDMLDRIHGK-----RCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           I  LCK G+L   V    +IH K      C  +V  N  L+   ++  +I+E M L K++
Sbjct: 287 IGGLCKEGRLTKAV----KIHRKMVKKGSCGNLVTYNM-LLGGCLKAGKIKEAMELWKQV 341

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L    + ++  YS+++    KMR L  A  ++ EM   G +   F Y T + + C+ G +
Sbjct: 342 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 401

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           E+A  L QEM NA  +P   +FN +I+G  KA   +       +M+   L P    F+ +
Sbjct: 402 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 461

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I RL + G   +A   L   +  GF+P+ + Y  L+ G + +G+  E++ L ++M  K  
Sbjct: 462 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 521

Query: 300 SPTLPAYTSLISSLCQCGKLEEAD 323
                  +++++  C C  ++E D
Sbjct: 522 VLDRKIVSTILT--CLCHSIQEVD 543



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 178/378 (47%), Gaps = 2/378 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + + G    ++++  LI  + K  R      +   M+E    P+  T   L+S
Sbjct: 157 ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS 216

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML-RKNMI 125
            LCK G +     +L  +  K     V+   +L+  +  + +++E + L   M   +N +
Sbjct: 217 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL 276

Query: 126 HDTI-AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +  +++++    K   L  A+ ++ +M+K+G   N   Y   +G   + GKI+EA  
Sbjct: 277 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 336

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++ + G  P   T+++LI+G  K + +  +     +M +  L P+   +N ++  LC
Sbjct: 337 LWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC 396

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G+ +QA  +     +    P+ I+++ +I G  K G+ Q V +L  +M    + P   
Sbjct: 397 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 456

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +++LI+ L + G+L+EA    + M +    P   +Y+SL+     KG+  + ++L  +M
Sbjct: 457 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 516

Query: 365 VSEGLKPSTSYLCSASTC 382
            ++G       + +  TC
Sbjct: 517 AAKGTVLDRKIVSTILTC 534



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%)

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             C  G + EA  L++EM    + P   ++N LI G  KAK+++E++    +M +    P
Sbjct: 7   GLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFP 66

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +      ++  LC+ G   +A  +L     KGF  + + Y  LI G+   G +    +L+
Sbjct: 67  NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELF 126

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            EM  K IS  +  Y+ L+  LC+ G+ +EA+     M  H + P V  Y  L+    + 
Sbjct: 127 DEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKD 186

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           G    A+ L   MV +G +PS 
Sbjct: 187 GRATHAMDLLNLMVEKGEEPSN 208



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 98/226 (43%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A+ +  EM ++  S +   Y T I   C+  K++EA  L+ EME AG  P   T   L++
Sbjct: 17  AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMD 76

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K  R++E++   E M  +        +  +I   C  GN  +   +    L KG S 
Sbjct: 77  GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISA 136

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N +TYS L+ G  + G+ +E   +   M    I P +  YT LI  LC+ G+   A    
Sbjct: 137 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 196

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +M      P    Y  L+    ++G    A  +   M+ +G K  
Sbjct: 197 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 76/171 (44%)

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++G  +   + E++    +M  + + P   ++N +I  LC+    K+A G+L     
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  PN +T + L+ G  K+G + E ++L   M+ K     +  Y +LIS  C  G L+ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + F  M    +   V  Y  LV      G   +A  +   M   G+ P 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPD 172



 Score = 41.2 bits (95), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 31/174 (17%), Positives = 71/174 (40%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR+  +A  +   +   G + +L  +NTL+  + K    +    ++Q M      P+  +
Sbjct: 363 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIIS 422

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             T+I    K G  Q   ++  ++      P  +  ++LI R+ +   ++E    L+RM+
Sbjct: 423 FNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 482

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
                 D + Y  ++       +    + +  +M  +G   +  + +T +   C
Sbjct: 483 ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 168/352 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+    ++  +L++   + +R      +   M+E    P+      +I +LCK  ++   
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D    I  K   P V+  T+L+  +    R  +   LL  M++K +  + I YS ++ A
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK   +  A  ++EEM++     +   Y++ I   C + +I+EAN +   M + G    
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N LI G  KAKR+E+ +    +M  R L+ +   +N +I+   + G+  +A    +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G SP+  TY+ L+GG    GE+++ L ++ +M+ + +   +  YT++I  +C+ G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           K+EEA   F  +    L P +  Y +++     KG   +   L  +M  EGL
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 174/372 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ ++V   + + +E  G    L +FN +I+      +  L   I   ML+    P+  T
Sbjct: 98  LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           I +L++  C+  ++   V ++D++      P ++   ++I  + + +R+ +     K + 
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           RK +  + + Y+ +V           A  +  +M+K+  + N   Y+  + A+ + GK+ 
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L +EM    + P   T++ LI G     RI+E+    + M+S+  L    ++N +I
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+    +    +      +G   N +TY+ LI G+ + G++ +  + + +M++  IS
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y  L+  LC  G+LE+A   F+ M+   +   +  Y +++    + G   +A  L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457

Query: 361 CEEMVSEGLKPS 372
              +  +GLKP 
Sbjct: 458 FCSLSLKGLKPD 469



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 171/366 (46%), Gaps = 8/366 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+   ++++N +I  + K+ R +  +  ++ +      PN  T   L++ LC   +    
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  K+ +P VI  ++L+   ++  ++ E   L + M+R ++  D + YS ++  
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 ++ A  +++ M+ +G  A+   Y T I  +C+  ++E+   L +EM   GL   
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI+G  +A  ++++  +  QM    + P    +N ++  LC+ G  ++A  +  
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +    + +TY+ +I G  K G+++E   L+  +  K + P +  YT+++S LC  G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
            L E +  +  MK   L+             L  G+   +  L ++M+S G  PS     
Sbjct: 485 LLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLLKDI 536

Query: 378 SASTCR 383
            +  C+
Sbjct: 537 KSGVCK 542



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 145/301 (48%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   +D+   +   R  P ++    L+  I++ ++ +  + L K+M    + +D   ++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++        +  AL +  +MLK G+  +     + +  +C   ++ +A  L+ +M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G KP    +N +I+   K KR+ ++  + +++  + + P+   +  ++  LC       A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L+  + K  +PN ITYS L+  + K G++ E  +L+ EM   SI P +  Y+SLI+ 
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC   +++EA++ F +M S   +  V  Y +L+    +       + L  EM   GL  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 373 T 373
           T
Sbjct: 365 T 365



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 123/265 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           +++ ++ + + L   M++       + ++ ++ A VK++  +  + + ++M   G   + 
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + +   I  +C   ++  A  ++ +M   G +P   T   L+ G  +  R+ +++S  ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P   A+N +I  LC+      A         KG  PN +TY+ L+ G      
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
             +  +L  +M  K I+P +  Y++L+ +  + GK+ EA + F+ M   S+ P +  Y S
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEG 368
           L+          +A  + + MVS+G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKG 325



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 82/187 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G    ++S+NTLI+   K+ R +   ++++ M +     N  T  TLI    + G + 
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              +   ++     SP +     L+  +     +E+ +V+ + M ++ M  D + Y+ ++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +E A  ++  +  +G   +   YTT +   C  G + E   L  +M+  GL 
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502

Query: 196 PYDETFN 202
             D T +
Sbjct: 503 KNDCTLS 509


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 183/376 (48%), Gaps = 3/376 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R  E +    S++SFN+++    K    D+    +  +L+    P+  +   LI+ LC  
Sbjct: 224 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 283

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +   +++   ++     P  +    L         I     +++ ML K +  D I Y
Sbjct: 284 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 343

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY-TTFIGAYCEYGKIEEANCLMQEME 190
           ++++  + ++ N++  LV+ ++ML RGF  NS +  +  +   C+ G+I+EA  L  +M+
Sbjct: 344 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 403

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             GL P    ++++I G  K  + + +L   ++M  +++LP+      ++  LC+ G   
Sbjct: 404 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 463

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L   +  G + + + Y+ +I GYAK G I+E L+L+  +    I+P++  + SLI
Sbjct: 464 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 523

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+   + EA K   ++K + L P V  Y +L+  +   GN      L  EM +EG+ 
Sbjct: 524 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 583

Query: 371 PS--TSYLCSASTCRG 384
           P+  T  +     CRG
Sbjct: 584 PTNVTYSVIFKGLCRG 599



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 161/345 (46%), Gaps = 13/345 (3%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           W + + ML+    P+  T   L+   C+ G +   + +L  +  +      I+  S++L 
Sbjct: 325 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 384

Query: 103 -IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            + +  RI+E + L  +M    +  D +AYS++++   K+   + AL +Y+EM  +    
Sbjct: 385 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 444

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           NS  +   +   C+ G + EA  L+  + ++G       +N++I+G AK+  IEE+L   
Sbjct: 445 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 504

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + ++   + PS + FN +I   C+  N  +A  +L +    G +P+ ++Y+ L+  YA  
Sbjct: 505 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 564

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK------------LEEADKYFKIM 329
           G  + + +L  EM+ + I PT   Y+ +   LC+  K             E+  +  + M
Sbjct: 565 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 624

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +S  + P    Y +++       + + A    E M S  L  S++
Sbjct: 625 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 669



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/386 (20%), Positives = 170/386 (44%), Gaps = 47/386 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +   ++  G S  L++++ +IH + K  + D+   +Y  M +    PN  T   L+ 
Sbjct: 395 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 454

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G L     +LD +     +  +++   +I    +   IEE + L K ++   +  
Sbjct: 455 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 514

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------------- 173
               ++ ++Y   K +N+  A  + + +   G + +   YTT + AY             
Sbjct: 515 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 574

Query: 174 ----------------------CEYGKIEEANCLMQE------------MENAGLKPYDE 199
                                 C   K E  N +++E            ME+ G+ P   
Sbjct: 575 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 634

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N +I+   + K +  +  + E M SR L  S + +N +I  LC  G  ++A+  +   
Sbjct: 635 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 694

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
            ++  S ++  Y+ LI  +  +G+ +  +KL++++ ++  + ++  Y+++I+ LC+   +
Sbjct: 695 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLV 754

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLV 345
            E+  +F +M S  + P +DI E ++
Sbjct: 755 NESKFFFCLMLSQGISPDLDICEVMI 780



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 164/369 (44%), Gaps = 43/369 (11%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ + +  + + ++ +  ++S  S+N++++   ++D+   +W +Y+     I+  NE T
Sbjct: 150 LRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK---MWDVYKE----IKDKNEHT 202

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             T++  LC+                                   ++++E+ ++ L+   
Sbjct: 203 YSTVVDGLCR-----------------------------------QQKLEDAVLFLRTSE 227

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K++    ++++ I+    K+  ++ A   +  +LK G   + + +   I   C  G I 
Sbjct: 228 WKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIA 287

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L  +M   G++P   T+N+L +G      I  +      M+ + L P    +  ++
Sbjct: 288 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 347

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITY-SHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
              C+ GN      +L   L +GF  N I   S ++ G  K G I E L L+ +M+   +
Sbjct: 348 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 407

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           SP L AY+ +I  LC+ GK + A   +  M    ++P    + +L+    +KG   +A  
Sbjct: 408 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 467

Query: 360 LCEEMVSEG 368
           L + ++S G
Sbjct: 468 LLDSLISSG 476



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 164/372 (44%), Gaps = 19/372 (5%)

Query: 17  RGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           RGF L S+I  + ++  + K+ R D    ++  M  +   P+      +I  LCK G+  
Sbjct: 369 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 428

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + + D +  KR  P    + +L+L + Q+  + E   LL  ++      D + Y++++
Sbjct: 429 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 488

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +E AL +++ +++ G + +   + + I  YC+   I EA  ++  ++  GL 
Sbjct: 489 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 548

Query: 196 PYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           P   ++  L++    C   K I+E      +M +  + P+   ++ + + LC     +  
Sbjct: 549 PSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 605

Query: 253 NGMLTLAL------------DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           N +L   +             +G  P++ITY+ +I    +   +         M+ +++ 
Sbjct: 606 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 665

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            +   Y  LI SLC  G + +AD +   ++  ++      Y +L+  H  KG+   A+ L
Sbjct: 666 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 725

Query: 361 CEEMVSEGLKPS 372
             +++  G   S
Sbjct: 726 FHQLLHRGFNVS 737



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 22/272 (8%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ + +LK+M  +N+   T +Y+ ++Y     R  +    VY+E+  +    N   Y+T
Sbjct: 153 VDDSLYILKKMKDQNLNVSTQSYNSVLY---HFRETDKMWDVYKEIKDK----NEHTYST 205

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +   C   K+E+A   ++  E   + P   +FN ++ G  K   ++ + S+   ++   
Sbjct: 206 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 265

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGFSPNEITYSHLIGGYAKEGEIQ 285
           L+PS  + N +I  LC  G+  +A   L LA D    G  P+ +TY+ L  G+   G I 
Sbjct: 266 LVPSVYSHNILINGLCLVGSIAEA---LELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 322

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS-----HSLVPGVDI 340
              ++  +M  K +SP +  YT L+   CQ G ++      K M S     +S++P   +
Sbjct: 323 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 382

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              L     + G   +AL L  +M ++GL P 
Sbjct: 383 LSGLC----KTGRIDEALSLFNQMKADGLSPD 410


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 178/373 (47%), Gaps = 5/373 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F  A D+  ++ +     S+I F  L++V+ K  + D+V  + +H L+ +   N+  T  
Sbjct: 52  FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKH-LQIMGVSNDLYTCN 110

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++  C+  Q       L ++      P +   TSLI       RIEE M ++ +M+  
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y+ I+ +  K  ++++AL ++ +M   G   +  +YT+ +   C  G+  +A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L++ M    +KP   TFN LI+   K  ++ ++     +M+   + P+   +  +I  
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G   +A  M  L   KG  P+ + Y+ LI G+ K  ++++ +K++YEM  K ++  
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YT+LI      GK   A + F  M S  + P +  Y  L+      G   KAL + E
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410

Query: 363 EMVS---EGLKPS 372
           +M     +G+ P+
Sbjct: 411 DMQKREIDGVPPN 423



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 171/363 (47%), Gaps = 3/363 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + GF   + +F +LI+     +R +    +   M+E    P+     T+I +LCK G 
Sbjct: 132 LMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGH 191

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + + +++      P V++ TSL+  +    R  +  +LL+ M+++ +  D I ++ 
Sbjct: 192 VDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNA 251

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A VK   L  A  +Y EM++   + N F YT+ I   C  G+++EA  +   ME  G
Sbjct: 252 LIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKG 311

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    +  LI G  K K++E+++    +M  + L  +   +  +I+     G    A 
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ 371

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM---EYKSISPTLPAYTSLI 310
            +    + +G  PN  TY+ L+      G++ + L ++ +M   E   + P +  Y  L+
Sbjct: 372 EVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLL 431

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             LC  GKLE+A   F  M+   +  G+  Y  ++    + G    AL+L   + S+G+K
Sbjct: 432 HGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVK 491

Query: 371 PST 373
           P+ 
Sbjct: 492 PNV 494



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 151/303 (49%), Gaps = 4/303 (1%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           Q    +D+   +   R  P +I  T L+  I + ++ +  + L K +    + +D    +
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 133 LIV--YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           L++  + +     L S+ +   +++K GF  + F +T+ I  +C   +IEEA  ++ +M 
Sbjct: 111 LLMNCFCQSSQPCLASSFL--GKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV 168

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G+KP    +  +I+   K   ++ +LS   QM +  + P    +  ++  LC  G  +
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A+ +L   + +   P+ IT++ LI  + KEG++ +  +LY EM   SI+P +  YTSLI
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           + LC  G+L+EA + F +M++    P V  Y SL+    +      A+ +  EM  +GL 
Sbjct: 289 NGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT 348

Query: 371 PST 373
            +T
Sbjct: 349 GNT 351



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 3/292 (1%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R     +I+FN LI    K  +      +Y  M++    PN  T  +LI+ LC  
Sbjct: 235 RGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCME 294

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+L     M   +  K C P V+  TSLI    + +++E+ M +   M +K +  +TI Y
Sbjct: 295 GRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITY 354

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL---MQE 188
           + ++     +     A  V+  M+ RG   N   Y   +   C  GK+ +A  +   MQ+
Sbjct: 355 TTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQK 414

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
            E  G+ P   T+N+L+ G     ++E++L     M  R +      +  +I+ +C+ G 
Sbjct: 415 REIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGK 474

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            K A  +      KG  PN +TY+ +I G  +EG + E   L+ +M+   +S
Sbjct: 475 VKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 181/401 (45%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F V   + +RG+    ++ NTLI  +    +       +  +L      N+ +  TLI+
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLIN 172

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +CK G  +  + +L +I G+   P V++ +++I  + + + + E   L   M  K +  
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS ++Y       L+ A+ +  EM+ +  + N + Y   + A C+ GK++EA  ++
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292

Query: 187 -------------------------------QEMENA----GLKPYDETFNLLIEGCAKA 211
                                          Q + NA    G+ P   T+ +LI G  K 
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           K ++E+L+  ++M  + ++P    ++ +I  LC+ G       ++    D+G   N ITY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITY 412

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           S LI G  K G +   + L+ +M+ + I P    +T L+  LC+ G+L++A + F+ + +
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLT 472

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 V  Y  ++  H ++G   +AL +  +M   G  P 
Sbjct: 473 KGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 153/313 (48%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T+  LI+  C  GQ+     +L +I  +   P  +   +LI  +  + ++++ +  
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             ++L +    + ++Y  ++    K+ +  +A+ + +++  R    N  +Y+T I A C+
Sbjct: 152 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCK 211

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           Y  + EA  L  EM   G+     T++ LI G     +++E++    +M+ + + P+   
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT 271

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC+ G  K+A  +L + L     P+ ITYS L+ GY    E+++   ++  M 
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              ++P +  YT LI+  C+   ++EA   FK M   ++VPG+  Y SL+    + G   
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391

Query: 356 KALHLCEEMVSEG 368
               L +EM   G
Sbjct: 392 YVWDLIDEMHDRG 404



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 135/295 (45%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V   +R+   R +P +I    ++    + +     + L  R+  K +  D I  ++++  
Sbjct: 44  VSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINC 103

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              M  +     V  ++LKRG+  ++    T I   C  G++++A     ++   G +  
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++  LI G  K      ++   +++  R   P+   ++ +I  LC+     +A G+ +
Sbjct: 164 QVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFS 223

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG S + +TYS LI G+  EG+++E + L  EM  K+I+P +  Y  L+ +LC+ G
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K++EA     +M    + P V  Y +L+  +       KA H+   M   G+ P 
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 2/257 (0%)

Query: 115  LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
            L  R+  K +  D    ++++     M  +     +  ++LKRG+  ++  +TT I   C
Sbjct: 948  LSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLC 1007

Query: 175  EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
              G++ +A     ++   G +    ++  LI G  K      ++    ++  R   P   
Sbjct: 1008 LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVV 1067

Query: 235  AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             +N +I  LC+     +A G+      KG S + +TY+ LI G+   G+++E + L  +M
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM 1127

Query: 295  EYKSISPTLPAYTSLISSLCQCGK--LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
              K+I+P +  Y  L+ +LC+ GK  L+E+      M+ +        +E ++    EK 
Sbjct: 1128 VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKD 1187

Query: 353  NKAKALHLCEEMVSEGL 369
               K   L  EM++ GL
Sbjct: 1188 ENDKVEKLLHEMIARGL 1204



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 95/188 (50%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +  + ++  LI+   K+   D    +++ M +    P   T  +LI  LCK G++   
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D++D +H +     VI  +SLI  + +   ++  + L  +M  + +  +T  +++++  
Sbjct: 394 WDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   L+ A  V++++L +G+  N + Y   I  +C+ G +EEA  ++ +ME+ G  P 
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513

Query: 198 DETFNLLI 205
             TF ++I
Sbjct: 514 AVTFEIII 521



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 121/266 (45%)

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           + +++ +    RML        I ++ I+ +  KM++  +A+ +   +  +G   +    
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              I  +C  G+I     ++ ++   G  P   T N LI+G     +++++L + +++++
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           +    +  ++  +I  +C+ G+ + A  +L     +   PN + YS +I    K   + E
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L+ EM  K IS  +  Y++LI   C  GKL+EA      M   ++ P V  Y  LV 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              ++G   +A  +   M+   +KP 
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPD 303



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 105/232 (45%)

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           ++N++ A+  +  ML    +     +   + ++ +      A  L   +E  G++P   T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N+LI       +I    S   +++ R   P     N +I+ LC  G  K+A       L
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +GF  N+++Y  LI G  K G+ +  +KL  +++ +   P +  Y+++I +LC+   + 
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA   F  M    +   V  Y +L+     +G   +A+ L  EMV + + P+
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPN 268



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 2/247 (0%)

Query: 1    MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
            M+ +  A  +   LE +G    L + N LI+      +    + I   +L+   +P+  T
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 61   IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              TLI+ LC  GQ+   +   D++  +      +   +LI  + +       + LL+++ 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 121  RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             +    D + Y+ I+ A  K + +  A  ++ EM  +G SA+   Y T I  +C  GK++
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 181  EANCLMQEMENAGLKPYDETFNLLIEGCAKAKR--IEESLSYCEQMMSRKLLPSCSAFNE 238
            EA  L+ +M    + P   T+N+L++   K  +  ++ESLS   +M       +   F  
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 239  MIRRLCE 245
            +I  L E
Sbjct: 1179 IISALFE 1185



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 94/205 (45%)

Query: 141  MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            M++  +A+ +   +  +G   + F     I  +C  G+I     ++ ++   G  P   T
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 201  FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            F  LI G     ++ ++L + ++++++    +  ++  +I  +C+ G+ + A  +L    
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 261  DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             +   P+ + Y+ +I    K   + +   L++EM  K IS  +  Y +LI   C  GKL+
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 321  EADKYFKIMKSHSLVPGVDIYESLV 345
            EA      M   ++ P V  Y  LV
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILV 1143



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 115/241 (47%), Gaps = 2/241 (0%)

Query: 56   PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
            P+  T+  LI+  C  GQ+     +L +I  +   P  I  T+LI  +  + ++ + +  
Sbjct: 959  PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018

Query: 116  LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              ++L +    + ++Y  ++    K+ +  +A+ +  ++  R    +  +Y T I A C+
Sbjct: 1019 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078

Query: 176  YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            +  + +A  L  EM   G+     T+N LI G     +++E++    +M+ + + P+   
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRT 1138

Query: 236  FNEMIRRLCECGNA--KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
            +N ++  LC+ G     ++  ML+   D G   N +T+  +I    ++ E  +V KL +E
Sbjct: 1139 YNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHE 1198

Query: 294  M 294
            M
Sbjct: 1199 M 1199



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 2/262 (0%)

Query: 76   TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
            T V +  R+  K   P +     LI       +I     +L ++L++    DTI ++ ++
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 136  YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                    +  AL  ++++L +GF  N   Y T I   C+ G    A  L+++++    K
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063

Query: 196  PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
            P    +N +I+   K + + ++     +M  + +      +N +I   C  G  K+A G+
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123

Query: 256  LTLALDKGFSPNEITYSHLIGGYAKEGE--IQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            L   + K  +PN  TY+ L+    KEG+  + E L +  +ME          +  +IS+L
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183

Query: 314  CQCGKLEEADKYFKIMKSHSLV 335
             +  + ++ +K    M +  L+
Sbjct: 1184 FEKDENDKVEKLLHEMIARGLL 1205



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 5/241 (2%)

Query: 137  AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK-----IEEANCLMQEMEN 191
             +  +  +E+  V +E  + RG  A +    T +GAY             A  L   +E 
Sbjct: 895  GEADLDQVEAIHVGFEHGVVRGGLAMAERGVTSVGAYIRIPHNPMKHYSTAVSLSHRLEL 954

Query: 192  AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             G++P   T N+LI       +I  + S   +++ R   P    F  +I  LC  G   +
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 252  ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            A       L +GF  N+++Y  LI G  K G+ +  +KL  +++ +   P +  Y ++I 
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 312  SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            +LC+   + +A   F  M    +   V  Y +L+      G   +A+ L  +MV + + P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 372  S 372
            +
Sbjct: 1135 N 1135



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 2/180 (1%)

Query: 17   RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
            +GF L+ +S+ TLI+ V K        ++ + +   +  P+     T+I ALCK   +  
Sbjct: 1025 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSK 1084

Query: 77   YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
               +   ++ K  S  V+   +LI       +++E + LL +M+ K +  +   Y+++V 
Sbjct: 1085 AYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVD 1144

Query: 137  AKVKMRN--LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
            A  K     L+ +L +  +M   G  AN+  +   I A  E  + ++   L+ EM   GL
Sbjct: 1145 ALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 4/369 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V R + + G   ++ ++NT++H   K         +   M E   YP+E T   LI+
Sbjct: 221 ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN 280

Query: 67  ALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            L K G+LQ    ++  +   G R SP       LI    ++  + E + L + M+ + +
Sbjct: 281 GLSKKGELQQAKGLIQEMAKAGLRVSPYTY--NPLICGYCKKGLLVEALALWEEMVTRGV 338

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
                +++ I+Y   K   +  A     +MLK+    +   Y T I  +C  G I EA  
Sbjct: 339 SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFI 398

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ E+    L     T+N LI+G  +   +E +L   E M++R + P    +  ++   C
Sbjct: 399 LLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGAC 458

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + GN   A       L  G +P++  Y+  I G  K G+  +  KL  EM  K   P + 
Sbjct: 459 KLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVI 518

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y   ++ LC+ G LEEA +  + M     VP    Y S +  H+E G+  +   +  +M
Sbjct: 519 TYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDM 578

Query: 365 VSEGLKPST 373
           +S G  P+ 
Sbjct: 579 LSRGQTPTV 587



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 182/401 (45%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +++RG   S ++FN LI+ ++K         + Q M +     +  T   LI 
Sbjct: 256 ALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLIC 315

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G L   + + + +  +  SP V  + +++    +E ++ +    L  ML+KN++ 
Sbjct: 316 GYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMP 375

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I+Y+ ++Y   ++ N+  A ++ +E+  R  S N   Y T I   C  G +E A  L 
Sbjct: 376 DIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLK 435

Query: 187 QEMENAGLKPYDETFNLLIEGCAK------AKRIEESLSYC------------------- 221
           ++M N G+ P   T+ +L+ G  K      AK   + + +                    
Sbjct: 436 EDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKL 495

Query: 222 ----------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                     E+M+++   P    +N  +  LC+ GN ++A  +L   +  G  P+ +TY
Sbjct: 496 GDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTY 555

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           +  +  + + G ++E  +++Y+M  +  +PT+  YT LI +    G+L+ A  YF  M+ 
Sbjct: 556 TSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQE 615

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +VP V  Y  L+    +     +A     EM  +G+ P+
Sbjct: 616 KGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPN 656



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 167/357 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG S ++ S NT+++   K  +     +    ML+    P+  +  TLI   C+ G +  
Sbjct: 336 RGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGE 395

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +LD +  +  S  ++   +LI  + +   +E  + L + M+ + +  D + Y+++V 
Sbjct: 396 AFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K+ N+  A   ++EML  G + + F YT  I    + G   +A  L +EM   G  P
Sbjct: 456 GACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPP 515

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N+ + G  K   +EE+    ++M+    +P    +   +    E G+ ++   + 
Sbjct: 516 DVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIF 575

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L +G +P  +TY+ LI  +A  G +   +  + EM+ K + P +  Y  LI+  C+ 
Sbjct: 576 YDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKV 635

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            K+++A K+F  M+   + P    Y  L+  +   G   +AL L  +M+ + ++P +
Sbjct: 636 RKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 145/307 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   L  R  S +++++NTLI  + +    +   ++ + M+    +P+  T   L++
Sbjct: 396 AFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G +    +  D +     +P     T+ I+  ++     +   L + ML K    
Sbjct: 456 GACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPP 515

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I Y++ V    K+ NLE A  + ++M++ G   +   YT+F+ A+ E G + E   + 
Sbjct: 516 DVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIF 575

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M + G  P   T+ +LI   A   R++ +++Y  +M  + ++P+   +N +I   C+ 
Sbjct: 576 YDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKV 635

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               QA        +KG  PN+ TY+ LI      G+ QE L+LY +M  K I P    +
Sbjct: 636 RKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTH 695

Query: 307 TSLISSL 313
            +L+  L
Sbjct: 696 GALLKKL 702



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 35/245 (14%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           +++ + ML     P+  T    ++ LCK G L                            
Sbjct: 502 FKLQEEMLTKGFPPDVITYNVFVNGLCKLGNL---------------------------- 533

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
                  EE   LL++M+R   + D + Y+  ++A ++  +L     ++ +ML RG +  
Sbjct: 534 -------EEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPT 586

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              YT  I A+   G+++ A     EM+  G+ P   T+N+LI G  K ++++++  +  
Sbjct: 587 VVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFI 646

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M  + + P+   +  +I   C  G  ++A  +    L K   P+  T+  L+    K+ 
Sbjct: 647 EMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDY 706

Query: 283 EIQEV 287
           ++Q V
Sbjct: 707 KVQAV 711



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 75/153 (49%)

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           E+MM  + LP     N +++ L +     +A  +  +  + G  P   TY+ ++  + K 
Sbjct: 191 EKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKG 250

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           GE+Q  L L  +M+ +   P+   +  LI+ L + G+L++A    + M    L      Y
Sbjct: 251 GEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTY 310

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             L+  + +KG   +AL L EEMV+ G+ P+ +
Sbjct: 311 NPLICGYCKKGLLVEALALWEEMVTRGVSPTVA 343


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 189/411 (45%), Gaps = 47/411 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + ++ +G    +IS+ TLIH    S + +    ++  ML+    P+  T   LI 
Sbjct: 321 ARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 380

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM------- 119
            LCK G++     +L+ +  + C P V+  T+L+  +  + RI +   L  +M       
Sbjct: 381 MLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMP 440

Query: 120 -----------------------LRKNMIHDT-----------IAYSLIVYAKVKMRNLE 145
                                  L KNM+ DT           I+YS+I+    K    +
Sbjct: 441 NVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRED 500

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +++EM   G   +   YT+ I  +C  GK ++A  L  EM + G++P   TF++LI
Sbjct: 501 EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 560

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +   K  ++ E+    E M+ R  +P+   +  +++ LC      +A  +       G  
Sbjct: 561 DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL 620

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEM-----EYKS-ISPTLPAYTSLISSLCQCGKL 319
           P+ +TY  L+ G  + G I+  L+L+ +M     +Y +   P + +Y+ +I  LC+ G+ 
Sbjct: 621 PDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRE 680

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +EA + FK MK+  ++P V  Y SL+      G    A HL  EMV +G++
Sbjct: 681 DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 731



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 186/415 (44%), Gaps = 47/415 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + ++ +G    +IS+ +LIH   +S + +    ++  ML+     +  T   LI 
Sbjct: 140 ARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLID 199

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM------- 119
            LCK G++    ++L+ +  + C   ++  ++LI  +  + RI E   L   M       
Sbjct: 200 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRP 259

Query: 120 -----------------------LRKNMIHDT-----------IAYSLIVYAKVKMRNLE 145
                                  L + M++DT           I+YS+I+    K R  +
Sbjct: 260 DAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 319

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +++EM  +G   +   YTT I  +C  GK E+A CL  EM + G++P   T ++LI
Sbjct: 320 EARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 379

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +   K  ++ E+    E ++ R  +P       +++ LC      +A  +       G  
Sbjct: 380 DMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCM 439

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS------ISPTLPAYTSLISSLCQCGKL 319
           PN +T + L+ G  + G I+  L+L+  M   +        P   +Y+ +I  LC+CG+ 
Sbjct: 440 PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE 499

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +EA + FK MK+  ++P V  Y SL+      G    A +L  EMV  G++P  +
Sbjct: 500 DEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 162/355 (45%), Gaps = 12/355 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG    +++  TL+  +    R     +++  M +    PN  T  TL+  LC+ G ++
Sbjct: 400 QRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIK 459

Query: 76  TYVDMLDRI------HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             +++   +      +G  C P  I  + +I  + +  R +E   L K M    +I D I
Sbjct: 460 IALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVI 519

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +Y+ +++   +    + A  ++ EM+  G   +   ++  I   C+ GK+ EAN L++ M
Sbjct: 520 SYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVM 579

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G  P   T+  L++G     RI E+     +M     LP    +  +++ LC+ GN 
Sbjct: 580 IQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNI 639

Query: 250 KQA----NGMLTLALDKG--FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           K A      ML+     G  F P+ I+YS +I G  K G   E  +L+ EM+   + P +
Sbjct: 640 KTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNV 699

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            +YTSLI   C+ GKLE+A   F  M    +      Y  ++    ++G   KAL
Sbjct: 700 ISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 170/369 (46%), Gaps = 12/369 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           QRG  L +++++TLI  +    R     +++  M +    P+     TL+  LC+ G+  
Sbjct: 38  QRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKIN 97

Query: 74  --LQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             L  + +ML+    +G +C P ++  + +I  + ++ R +E   L K M  + M+ D I
Sbjct: 98  IALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVI 157

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +Y+ +++   +    E A  ++ EML  G  ++    +  I   C+ GK+ EAN L++ M
Sbjct: 158 SYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVM 217

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G      T++ LI+G     RI E+      M      P   A+  +++ LC+ GN 
Sbjct: 218 IQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNI 277

Query: 250 KQA----NGMLTLALDKGF--SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
             A      ML      G    P  I+YS +I G  K+    E  +L+ EM+ + I P +
Sbjct: 278 NTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDV 337

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YT+LI   C  GK E+A   F  M    + P V     L+ +  +KG   +A  L E 
Sbjct: 338 ISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEV 397

Query: 364 MVSEGLKPS 372
           ++  G  P 
Sbjct: 398 VIQRGCIPD 406



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 160/366 (43%), Gaps = 47/366 (12%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   LI   CK G++    ++L+ +  + C   ++  ++LI  +  + RI E   L
Sbjct: 8   PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67

Query: 116 LKRM------------------------------LRKNMIHDT-----------IAYSLI 134
              M                              L + M++DT           ++YS+I
Sbjct: 68  FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K R  + A  +++EM  +G   +   YT+ I  +C  GK E+A CL  EM + G+
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI 187

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +    T ++LI+   K  ++ E+    E M+ R  +     ++ +I+ LC      +A  
Sbjct: 188 RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATR 247

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS------ISPTLPAYTS 308
           +       G  P+ I Y  L+ G  + G I   L+L+ EM   +        PTL +Y+ 
Sbjct: 248 LFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSI 307

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I  LC+  + +EA + FK MK+  ++P V  Y +L+      G   KA  L  EM+  G
Sbjct: 308 IIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367

Query: 369 LKPSTS 374
           ++P  +
Sbjct: 368 IQPDVT 373



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 165/360 (45%), Gaps = 6/360 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +LIS++ +I  + K  R D    +++ M      P+  +  TLI   C  G+ +    + 
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +      P V  ++ LI  + ++ ++ E   LL+ ++++  I D +  + +V      
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN------AGLK 195
             +  A  ++ +M K G   N     T +   C+ G I+ A  L + M +         K
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 480

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   +++++I+G  K  R +E+    ++M +  ++P   ++  +I   C  G  K A  +
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +D G  P+  T+S LI    KEG++ E  +L   M  +   P    YT+L+  LC 
Sbjct: 541 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 600

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
             ++ EA + F  M+    +P V  Y +L+    + GN   AL L ++M+S+  +  T++
Sbjct: 601 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 660



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 169/356 (47%), Gaps = 14/356 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT----Y 77
           +L+S++ +I  + K  R D    +++ M      P+  +  +LI   C+ G+ +     +
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF 179

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            +MLD   G R    V  ++ LI  + +E ++ E   LL+ M+++  I D + YS ++  
Sbjct: 180 NEMLDV--GIRSD--VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 235

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA----G 193
                 +  A  ++  M K G   ++  Y T +   C+ G I  A  L QEM N     G
Sbjct: 236 LCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYG 295

Query: 194 LK--PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           +K  P   +++++I+G  K +R +E+    ++M ++ ++P   ++  +I   C  G  ++
Sbjct: 296 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    LD G  P+  T S LI    K+G++ E  KL   +  +   P +   T+L+ 
Sbjct: 356 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVK 415

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            LC   ++ +A + F  M+    +P V    +L+    + GN   AL L + M+S+
Sbjct: 416 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 471



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 163/371 (43%), Gaps = 12/371 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY------PNEATIRTLISA 67
           +++ G     I++ TL+  + ++ + ++   ++Q ML +         P   +   +I  
Sbjct: 71  MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDG 130

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK  +     ++   +  +   P VI  TSLI    +  + E+   L   ML   +  D
Sbjct: 131 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSD 190

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
               S+++    K   +  A  + E M++RG   +   Y+T I   C   +I EA  L  
Sbjct: 191 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFM 250

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR------KLLPSCSAFNEMIR 241
            M+  G +P    +  L++G  +   I  +L   ++M++       K  P+  +++ +I 
Sbjct: 251 SMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIID 310

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+     +A  +      +G  P+ I+Y+ LI G+   G+ ++   L+ EM    I P
Sbjct: 311 GLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 370

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +   + LI  LC+ GK+ EA+K  +++     +P V    +LV     K   +KA  L 
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLF 430

Query: 362 EEMVSEGLKPS 372
            +M   G  P+
Sbjct: 431 LKMQKLGCMPN 441



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 6/221 (2%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           ML  G   +       I  +C+ GK+ EAN L++ M   G      T++ LI+G     R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA----NGMLTLALDKGF--SPN 267
           I E+      M      P   A+  +++ LC+ G    A      ML      G    P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            ++YS +I G  K+    E  +L+ EM+ + + P + +YTSLI   C+ GK E+A   F 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            M    +   V     L+ I  ++G   +A  L E M+  G
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 6/192 (3%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M + G++P   T  +LI+   K  ++ E+    E M+ R  +     ++ +I+ LC    
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS------ISPT 302
             +A  +       G  P+ I Y  L+ G  + G+I   L L+ EM   +        PT
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           L +Y+ +I  LC+  + +EA + FK MK+  ++P V  Y SL+      G   KA  L  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 363 EMVSEGLKPSTS 374
           EM+  G++   +
Sbjct: 181 EMLDVGIRSDVT 192


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 169/350 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++NTLI  +    R      +   ML     P+  T   L+ A CK    +  + +LD +
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K C+P ++    ++  I QE R+++ +  LK +       +T++Y++++         
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 279

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  +  EM ++G   N   +   I   C  G +E A  +++++   G  P   ++N L
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +    K K++++++++ + M+SR   P   ++N ++  LC  G    A  +L    DKG 
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P  I+Y+ +I G  K G+ +E L+L  EM  K + P +  Y+++ + LC+  ++E+A +
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            F  ++   + P   +Y +++    ++     A+ L   M+  G  P+ S
Sbjct: 460 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 509



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 112/228 (49%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A +V   + + G + + +S+N L+H   K  + D        M+    YP+  +  
Sbjct: 313 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 372

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALC+ G++   V++L ++  K C+P++I   ++I  + +  + +E + LL  M+ K
Sbjct: 373 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 432

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS I     +   +E A+  + ++   G   N+ +Y   I   C+  +   A
Sbjct: 433 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 492

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             L   M   G  P + T+ +LIEG A    I+E+    +++ SR ++
Sbjct: 493 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 3/212 (1%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y   +  YC  G+++ A  L+ EM    ++P   T+N LI G     R   +L+  
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVL 181

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M+ R+ +P    +  ++   C+    KQA  +L    DKG +P+ +TY+ ++ G  +E
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + + ++    +      P   +Y  ++  LC   + E+A++    M      P V  +
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     KG    AL + E++   G  P++
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 333


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 183/376 (48%), Gaps = 3/376 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R  E +    S++SFN+++    K    D+    +  +L+    P+  +   LI+ LC  
Sbjct: 253 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 312

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +   +++   ++     P  +    L         I     +++ ML K +  D I Y
Sbjct: 313 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 372

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY-TTFIGAYCEYGKIEEANCLMQEME 190
           ++++  + ++ N++  LV+ ++ML RGF  NS +  +  +   C+ G+I+EA  L  +M+
Sbjct: 373 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 432

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             GL P    ++++I G  K  + + +L   ++M  +++LP+      ++  LC+ G   
Sbjct: 433 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 492

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L   +  G + + + Y+ +I GYAK G I+E L+L+  +    I+P++  + SLI
Sbjct: 493 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 552

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+   + EA K   ++K + L P V  Y +L+  +   GN      L  EM +EG+ 
Sbjct: 553 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 612

Query: 371 PS--TSYLCSASTCRG 384
           P+  T  +     CRG
Sbjct: 613 PTNVTYSVIFKGLCRG 628



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 161/345 (46%), Gaps = 13/345 (3%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           W + + ML+    P+  T   L+   C+ G +   + +L  +  +      I+  S++L 
Sbjct: 354 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 413

Query: 103 -IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            + +  RI+E + L  +M    +  D +AYS++++   K+   + AL +Y+EM  +    
Sbjct: 414 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 473

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           NS  +   +   C+ G + EA  L+  + ++G       +N++I+G AK+  IEE+L   
Sbjct: 474 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 533

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + ++   + PS + FN +I   C+  N  +A  +L +    G +P+ ++Y+ L+  YA  
Sbjct: 534 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 593

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK------------LEEADKYFKIM 329
           G  + + +L  EM+ + I PT   Y+ +   LC+  K             E+  +  + M
Sbjct: 594 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 653

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +S  + P    Y +++       + + A    E M S  L  S++
Sbjct: 654 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 698



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/386 (20%), Positives = 170/386 (44%), Gaps = 47/386 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +   ++  G S  L++++ +IH + K  + D+   +Y  M +    PN  T   L+ 
Sbjct: 424 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 483

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G L     +LD +     +  +++   +I    +   IEE + L K ++   +  
Sbjct: 484 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 543

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------------- 173
               ++ ++Y   K +N+  A  + + +   G + +   YTT + AY             
Sbjct: 544 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 603

Query: 174 ----------------------CEYGKIEEANCLMQE------------MENAGLKPYDE 199
                                 C   K E  N +++E            ME+ G+ P   
Sbjct: 604 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 663

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N +I+   + K +  +  + E M SR L  S + +N +I  LC  G  ++A+  +   
Sbjct: 664 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 723

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
            ++  S ++  Y+ LI  +  +G+ +  +KL++++ ++  + ++  Y+++I+ LC+   +
Sbjct: 724 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLV 783

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLV 345
            E+  +F +M S  + P +DI E ++
Sbjct: 784 NESKFFFCLMLSQGISPDLDICEVMI 809



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 164/372 (44%), Gaps = 19/372 (5%)

Query: 17  RGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           RGF L S+I  + ++  + K+ R D    ++  M  +   P+      +I  LCK G+  
Sbjct: 398 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 457

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + + D +  KR  P    + +L+L + Q+  + E   LL  ++      D + Y++++
Sbjct: 458 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 517

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +E AL +++ +++ G + +   + + I  YC+   I EA  ++  ++  GL 
Sbjct: 518 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 577

Query: 196 PYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           P   ++  L++    C   K I+E      +M +  + P+   ++ + + LC     +  
Sbjct: 578 PSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 634

Query: 253 NGMLTLAL------------DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           N +L   +             +G  P++ITY+ +I    +   +         M+ +++ 
Sbjct: 635 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 694

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            +   Y  LI SLC  G + +AD +   ++  ++      Y +L+  H  KG+   A+ L
Sbjct: 695 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 754

Query: 361 CEEMVSEGLKPS 372
             +++  G   S
Sbjct: 755 FHQLLHRGFNVS 766



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 22/272 (8%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ + +LK+M  +N+   T +Y+ ++Y     R  +    VY+E+  +    N   Y+T
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLY---HFRETDKMWDVYKEIKDK----NEHTYST 234

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +   C   K+E+A   ++  E   + P   +FN ++ G  K   ++ + S+   ++   
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGFSPNEITYSHLIGGYAKEGEIQ 285
           L+PS  + N +I  LC  G+  +A   L LA D    G  P+ +TY+ L  G+   G I 
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEA---LELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS-----HSLVPGVDI 340
              ++  +M  K +SP +  YT L+   CQ G ++      K M S     +S++P   +
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              L     + G   +AL L  +M ++GL P 
Sbjct: 412 LSGLC----KTGRIDEALSLFNQMKADGLSPD 439



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/282 (20%), Positives = 130/282 (46%), Gaps = 11/282 (3%)

Query: 101 LRIIQEERI-EEGMV--LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
           L++I E+ + EEG +  LL    RK      + + ++++   ++R ++ +L + ++M  +
Sbjct: 137 LQVILEQLLQEEGTLCELLSNSFRK-WESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQ 195

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
             + ++  Y + +  + E  K+ +   + +E+++      + T++ +++G  + +++E++
Sbjct: 196 NLNVSTQSYNSVLYHFRETDKMWD---VYKEIKDKN----EHTYSTVVDGLCRQQKLEDA 248

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           + +      + + PS  +FN ++   C+ G    A       L  G  P+  +++ LI G
Sbjct: 249 VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILING 308

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
               G I E L+L  +M    + P    Y  L       G +  A +  + M    L P 
Sbjct: 309 LCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 368

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           V  Y  L+    + GN    L L ++M+S G + ++   CS 
Sbjct: 369 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 410


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 2/363 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL  + + V + + + G   ++  FN LIH   KS   +   ++   M     +P+  T 
Sbjct: 176 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 235

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLIS  CK G     + + DR+     SP ++   SLI    +E R+ E + L + +  
Sbjct: 236 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREING 295

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
               H  + Y+ ++    ++ +LE AL + E M   G       Y + +   CE GKI++
Sbjct: 296 ATPNH--VTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           AN L+ EM    ++P + T N LI    K   +  ++   ++M+   L P    F  +I 
Sbjct: 354 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIH 413

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+      A   L   LD GFSP+  TYS L+  Y  +   + V++L  E+  K +  
Sbjct: 414 GFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFV 473

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI  LC+  K+E A++ F +M+   +     +Y SL   + + G    A  + 
Sbjct: 474 DISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDML 533

Query: 362 EEM 364
           +EM
Sbjct: 534 DEM 536



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 145/306 (47%), Gaps = 2/306 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G S  ++++N+LI+   +  R     R+++ +  N   PN  T  TLI   C+   
Sbjct: 258 MERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVND 315

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  + + + +  +   P V+   S++ ++ +E +I++   LL  M  + +  D +  + 
Sbjct: 316 LEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT 375

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K+ ++ SA+ V ++ML+ G   + F +   I  +C+  +++ A   + EM +AG
Sbjct: 376 LINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 435

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T++ L++        E  +   +++  + L    S +  +IRRLC+    + A 
Sbjct: 436 FSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAE 495

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            + TL   KG   + + Y+ L   Y K G+      +  EM+ + +  TL  Y    +S 
Sbjct: 496 RIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASY 555

Query: 314 CQCGKL 319
              G +
Sbjct: 556 AGDGSI 561



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 2/214 (0%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
            +NS + +  +  Y      ++A  + + M   G KP+     +L+   AKA+       
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 183

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             ++M+   ++P+   FN +I   C+ G+ ++A  +L     +   P+  TY+ LI  Y 
Sbjct: 184 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+G   E L +   ME   +SP +  Y SLI   C+ G++ EA + F+  + +   P   
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFR--EINGATPNHV 301

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Y +L+  +    +  +AL L E M  EGL P  
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGV 335



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 69/173 (39%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V + + + G      +F  LIH   K    D        ML+    P+ +T   L+ 
Sbjct: 389 AMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVD 448

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +       +  + + D +  K     + V  +LI R+ + ++IE    +   M  K M  
Sbjct: 449 SYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKG 508

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           D++ Y+ + YA  K     +A  + +EM KR       +Y  F  +Y   G I
Sbjct: 509 DSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 561


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 131/246 (53%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + ++Y+ I++      N+E A  + + M  +G   +S+ Y + I   C+ G++EEA+ L 
Sbjct: 207 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 266

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   GL P   T+N LI+G      +E + SY ++M+ + ++PS S +N ++  L   
Sbjct: 267 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 326

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A+ M+     KG  P+ ITY+ LI GY++ G  +    L+ EM  K I PT   Y
Sbjct: 327 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTY 386

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           TSLI  L +  +++EAD  F+ +    + P V ++ +++  H   GN  +A  L +EM  
Sbjct: 387 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR 446

Query: 367 EGLKPS 372
           + + P 
Sbjct: 447 KSVPPD 452



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 172/362 (47%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++E  GF  +++S+NT+IH  +     +   RI   M      P+  T  +LIS +CK G
Sbjct: 198 FMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG 257

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L+    + D++      P  +   +LI     +  +E        M++K ++     Y+
Sbjct: 258 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 317

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           L+V+A      +  A  + +EM K+G   ++  Y   I  Y   G  + A  L  EM + 
Sbjct: 318 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSK 377

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G++P   T+  LI   ++  R++E+    E+++ + + P    FN MI   C  GN ++A
Sbjct: 378 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERA 437

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L     K   P+E+T++ L+ G  +EG+++E   L  EM+ + I P   +Y +LIS 
Sbjct: 438 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISG 497

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + G +++A      M S    P +  Y +L+    +      A  L +EMV++G+ P 
Sbjct: 498 YGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 557

Query: 373 TS 374
            S
Sbjct: 558 DS 559



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 159/341 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +  +G      ++ +LI  + K  R +    ++  M+E    PN  T  TL
Sbjct: 225 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 284

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C  G L+      D +  K   P V     L+  +  E R+ E   ++K M +K +
Sbjct: 285 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 344

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I D I Y++++    +  N + A  ++ EML +G       YT+ I       +++EA+ 
Sbjct: 345 IPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 404

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++ + G+ P    FN +I+G      +E +    ++M  + + P    FN +++  C
Sbjct: 405 LFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 464

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  ++A  +L     +G  P+ I+Y+ LI GY + G+I++   +  EM     +PTL 
Sbjct: 465 REGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLL 524

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            Y +LI  LC+  + + A++  K M +  + P    Y SL+
Sbjct: 525 TYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 565



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 137/301 (45%)

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+L+   + +  + G    P V+   ++I        IE    +L  M  K +  D+  Y
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
             ++    K   LE A  ++++M++ G   N+  Y T I  YC  G +E A     EM  
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+NLL+       R+ E+    ++M  + ++P    +N +I     CGNAK+
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    L KG  P  +TY+ LI   ++   ++E   L+ ++  + +SP +  + ++I 
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C  G +E A    K M   S+ P    + +L+     +G   +A  L +EM   G+KP
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 372 S 372
            
Sbjct: 487 D 487



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 133/274 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF     + ++G   S+ ++N L+H +    R      + + M +    P+  T   
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 353

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+   + G  +   D+ + +  K   P  +  TSLI  + +  R++E   L +++L + 
Sbjct: 354 LINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D I ++ ++       N+E A ++ +EM ++    +   + T +   C  GK+EEA 
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 473

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM+  G+KP   ++N LI G  +   I+++    ++M+S    P+   +N +I+ L
Sbjct: 474 MLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCL 533

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           C+      A  +L   ++KG SP++ TY  LI G
Sbjct: 534 CKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 567



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 101/211 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   +  +G   + +++ +LI+V+++ +R      +++ +L+    P+      +I 
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G ++    +L  +  K   P  +   +L+    +E ++EE  +LL  M  + +  
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I+Y+ ++    +  +++ A  V +EML  GF+     Y   I   C+  + + A  L+
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           +EM N G+ P D T+  LIEG      + E 
Sbjct: 547 KEMVNKGISPDDSTYLSLIEGMGNVDTLVED 577



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 66/128 (51%)

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  K+A   +      GF PN ++Y+ +I GY+  G I+   ++   M  K I P    Y
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLIS +C+ G+LEEA   F  M    LVP    Y +L+  +  KG+  +A    +EMV 
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 367 EGLKPSTS 374
           +G+ PS S
Sbjct: 307 KGIMPSVS 314


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 152/325 (46%), Gaps = 2/325 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +IS++  I+ + K  +      I++ M E    P+  T   LI+ LCK  QL+  V ++
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +  +  SP V+  T+LI       R++  M +L  M  + +  +T+ Y+ ++      
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 142 RNLESALVVYEEMLKRGFS--ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
             +E A++V +EM  RG     N   YT  I   C+ G  E     + EM  +G  P + 
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+  LI G  +     E+     +M++         +N +I  LC+ G    A  M  L 
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           ++KG +P+  TY+ LI G    G + E L L  EM  K I P    YT+LI+   Q  + 
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 320 EEADKYFKIMKSHSLVPGVDIYESL 344
           + A +    MKS+ L+P  DIY+ L
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 160/331 (48%), Gaps = 2/331 (0%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           RIY+  L N +  +  +    I+ LCK GQ+   +++   +  K  +P       LI  +
Sbjct: 77  RIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGL 136

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            ++ ++E G+ L+  M  +      + Y+ +++       +++A+ + +EM  RG + N+
Sbjct: 137 CKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNT 196

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLK--PYDETFNLLIEGCAKAKRIEESLSYC 221
             YT  I   C+ G++E A  +++EM+  G +  P   T+  LI G  +    E  + + 
Sbjct: 197 VTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFL 256

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M+     P+ + +  +I  LC+ G+  +A  +L   +  G   + + Y+ LI G  K 
Sbjct: 257 DEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKM 316

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           GE+    ++   M  K ++P +  YTSLI  LC  G L+EA    + M++  +VP    Y
Sbjct: 317 GELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTY 376

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +L+    +      AL L  EM S GL P+
Sbjct: 377 TTLINGFTQADRTDHALQLVNEMKSNGLMPA 407



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 130/268 (48%), Gaps = 2/268 (0%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           +I E M + + M  K    D+  Y++++    K   LE  + + +EM  RGFS     YT
Sbjct: 106 QIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYT 165

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           T I  +C  G+++ A  ++ EME+ G+ P   T+  LI+G      +E ++   ++M  R
Sbjct: 166 TLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLR 225

Query: 228 --KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
             +  P+   + ++I  LC+ G  +     L   +  G  PN  TY+ LI G  ++G   
Sbjct: 226 GNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFL 285

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E   L  EM        +  Y SLI  LC+ G+L+ A +   +M    + P V  Y SL+
Sbjct: 286 EAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLI 345

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
               + G   +AL L +EM ++G+ P++
Sbjct: 346 QGLCDAGLLDEALGLMQEMRAKGIVPNS 373



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 2/309 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R +E++G +    ++N LI+ + K  + ++   +   M      P   T  TLI 
Sbjct: 110 AMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIH 169

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKN-M 124
             C  G++   +D+LD +  +  +P  +  T+LI  +     +E  +++LK M LR N  
Sbjct: 170 GFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNEC 229

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ +++   +    E  +   +EM+  G   N+  YT  I   C+ G   EA  
Sbjct: 230 CPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAV 289

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ EM   G +     +N LI+G  K   ++ +      M+ + + P    +  +I+ LC
Sbjct: 290 LLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLC 349

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   +A G++     KG  PN +TY+ LI G+ +       L+L  EM+   + P   
Sbjct: 350 DAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGD 409

Query: 305 AYTSLISSL 313
            Y  L  SL
Sbjct: 410 IYKILFKSL 418



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 2/231 (0%)

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           + R + S+L +Y   L      +   Y+  I   C+ G+I EA  + +EME  G  P   
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N+LI G  K  ++E  +S  ++M +R   P+   +  +I   C  G    A  +L   
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS--ISPTLPAYTSLISSLCQCG 317
             +G +PN +TY+ LI G    GE++  + +  EM+ +     P +  YT LI  LCQ G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             E   ++   M      P    Y +L+    +KG+  +A  L  EMV+ G
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIG 298



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 37/277 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E+   +   ++ RGFS +++++ TLIH    + R D    I   M      PN  T   
Sbjct: 142 LEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTA 201

Query: 64  LISALCKGGQLQTYVDMLD--RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           LI  LC  G+++  + +L   ++ G  C P V+  T LI  + Q+   E GM  L  M+ 
Sbjct: 202 LIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMII 261

Query: 122 KN----------MIH-------------------------DTIAYSLIVYAKVKMRNLES 146
                       +IH                         D + Y+ ++    KM  L+ 
Sbjct: 262 SGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDF 321

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A  +   M+++G + + F YT+ I   C+ G ++EA  LMQEM   G+ P   T+  LI 
Sbjct: 322 AREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLIN 381

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           G  +A R + +L    +M S  L+P+   +  + + L
Sbjct: 382 GFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 181/393 (46%), Gaps = 36/393 (9%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG      +FN L+ ++ KS+  +  WR++     N++  +  +   +I   C+ G L  
Sbjct: 111 RGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKL-DVYSFGIMIKGCCEVGYLDK 169

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV- 135
             ++L ++     SP V+V T+LI    +   IE G  L  +M   +++ +   Y++++ 
Sbjct: 170 GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLIN 229

Query: 136 --------------YAKVKMRN--------------------LESALVVYEEMLKRGFSA 161
                         Y K+K+                      L +A  +++EM +RG + 
Sbjct: 230 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 289

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           N   Y T IG  C+  ++ EA  LM  M+  GL P   ++N LI+G      ++++ S  
Sbjct: 290 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 349

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            QM S    PS + +N +I    E  N+     M+     +G SP+++TY+ L+    + 
Sbjct: 350 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 409

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             I++  ++Y  ME   +   +  Y  LI  LC  G ++EA K FK +    L P   IY
Sbjct: 410 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 469

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +++  + ++G+  +AL L +EM   G+ P+ +
Sbjct: 470 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVA 502



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 136/297 (45%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +Y+ M      PN  T  ++I   C  G+L    ++ D +  +  +  V+   +LI  + 
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 302

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           QE R+ E   L+ RM R  +  + I+Y+ ++     + NL+ A  ++ +M   G S +  
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 362

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            Y   I  + E         +++EME  GL P   T+ +L++   ++  IE++      M
Sbjct: 363 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 422

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
               L+     +  +I  LC  G+ K+A+ +     +    PN++ Y+ +I GY KEG  
Sbjct: 423 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 482

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
              L+L  EM    + P + +Y S I  LC+  K  EA+   K M    L P + I+
Sbjct: 483 YRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIW 539



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 122/261 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   + +RG + +++++NTLI  + +  R     R+   M  +   PN  +  TLI 
Sbjct: 275 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLID 334

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G L     + +++     SP +     LI    + +       +++ M  + +  
Sbjct: 335 GYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP 394

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y++++ A V+  N+E A  +Y  M K G  A+ ++Y   I   C  G ++EA+ L 
Sbjct: 395 SKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLF 454

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + ++   LKP D  +N +I G  K      +L   ++M    ++P+ +++N  I  LC+ 
Sbjct: 455 KSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKD 514

Query: 247 GNAKQANGMLTLALDKGFSPN 267
               +A  +L   ++ G  P+
Sbjct: 515 EKWTEAEVLLKDMIELGLKPS 535



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 1/236 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ E    +CR +++ G S +LIS+NTLI         D    ++  M  + + P+ AT 
Sbjct: 306 RVLEAERLMCR-MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATY 364

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI+   +        DM+  +  +  SP  +  T L+  +++ + IE+   +   M +
Sbjct: 365 NILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEK 424

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D   Y ++++    + +++ A  +++ + +     N  +Y T I  YC+ G    
Sbjct: 425 AGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYR 484

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           A  L++EM   G+ P   ++N  I    K ++  E+    + M+   L PS S +N
Sbjct: 485 ALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWN 540



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 3/212 (1%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           F  +  ++   I A+      E+A     +M   GL P   TFN L+    K+   E++ 
Sbjct: 78  FPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 137

Query: 219 S-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
             + E   + KL     +F  MI+  CE G   +   +L    + G SPN + Y+ LI G
Sbjct: 138 RVFNETKGNVKL--DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 195

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             K G+I+   +L+Y+M    +      YT LI+   + G  ++  + ++ MK   +VP 
Sbjct: 196 CCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPN 255

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           V  Y S++      G    A  L +EM   G+
Sbjct: 256 VYTYNSMICRCCNDGKLNNAFELFDEMRERGV 287


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 166/321 (51%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +++ G   +L+  NT IHV+  ++  +   R  + M      PN  T   LI 
Sbjct: 137 AMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIK 196

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C   +++  ++++  +  K CSP  +   +++  + +  RI E M ++++M    ++ 
Sbjct: 197 GYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLA 256

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ +++   K ++ + AL    E  KRGF  +   Y+  + +YC+ G++++A  ++
Sbjct: 257 DQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIV 316

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G  P   T+  +I G ++A  + ++    +QM      P+  ++   ++ LC+ 
Sbjct: 317 NEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQK 376

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN+ +A  M+  + ++ ++PN ITYS ++ G+ +EG++ +   +  EM  K   PT    
Sbjct: 377 GNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEI 436

Query: 307 TSLISSLCQCGKLEEADKYFK 327
             L+ SLC+ G+++EA K+ +
Sbjct: 437 NLLLQSLCRIGRVDEAKKFME 457



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 155/367 (42%), Gaps = 4/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    R  ++RGF +  + ++ ++    K  R D    I   M      P+  T   +I+
Sbjct: 277 ALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIIN 336

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              + G++     ML +++   C P  +  T+ +  + Q+    E   ++K    +    
Sbjct: 337 GFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTP 396

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS++++   +   L  A  V  EM+ +GF          + + C  G+++EA   M
Sbjct: 397 NAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFM 456

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E  N G       F  +I    +   IE +LS  + M      P    +  +I  L + 
Sbjct: 457 EECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKK 516

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +    L KG  P  +TY  +I  Y + G ++++L L  +M  +    T  A+
Sbjct: 517 GRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRT--AF 574

Query: 307 TSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             +I  LC  G LE ADK   K++++ S +   +    L+  +L KG    A  +   M 
Sbjct: 575 NQVIEKLCTFGNLEAADKLLGKVLRTASRIDA-NTCHVLMESYLRKGIPLSAYKVACRMF 633

Query: 366 SEGLKPS 372
           S  L P 
Sbjct: 634 SRSLIPD 640



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 140/303 (46%)

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G+L+  + +L  +      P ++V  + I  ++    +E+ +  L+RM    ++ + +
Sbjct: 130 RAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVV 189

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++     +  +E A+ +  EM  +G S +   Y T +G  C+  +I E   ++++M
Sbjct: 190 TYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKM 249

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E+  L     T+N LI    K +  +E+L +  +   R        ++ ++   C+ G  
Sbjct: 250 EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRM 309

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            QA  ++     +G  P+ +TY+ +I G+++ GE+ +  K+  +M      P   +YT+ 
Sbjct: 310 DQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAF 369

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LCQ G   EA +  K  +     P    Y  ++     +G  + A  +  EM+ +G 
Sbjct: 370 LKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGF 429

Query: 370 KPS 372
            P+
Sbjct: 430 FPT 432



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/362 (20%), Positives = 165/362 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   +  +G S   +S+ T++  + K+ R   V  + + M +     ++ T  TL
Sbjct: 205 EDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTL 264

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK       +  L     +      +  ++++    +E R+++   ++  M  +  
Sbjct: 265 IHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGC 324

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I D + Y+ I+    +   +  A  + ++M K G   N+  YT F+   C+ G   EA  
Sbjct: 325 IPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEARE 384

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +M+  E     P   T+++++ G  +  ++ ++     +M+ +   P+    N +++ LC
Sbjct: 385 MMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLC 444

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A   +   L+ G + N + ++ +I  + ++ +I+  L L  +M   +  P   
Sbjct: 445 RIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAV 504

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT++I +L + G++EEA +    M    + P    Y +++  + + G     L+L ++M
Sbjct: 505 TYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKM 564

Query: 365 VS 366
           ++
Sbjct: 565 LT 566



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 154/330 (46%), Gaps = 21/330 (6%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ EV  DV   +E        +++NTLIH++ K          +QH  E +++  EA  
Sbjct: 238 RIREV-MDVIEKMEDTKLLADQVTYNTLIHMLCK----------HQHADEALQFLREAQK 286

Query: 62  R----------TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE 111
           R           ++ + CK G++    ++++ +  + C P V+  T++I    Q   + +
Sbjct: 287 RGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQ 346

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
              +L++M +     +T++Y+  +    +  N   A  + +   ++ ++ N+  Y+  + 
Sbjct: 347 ARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMH 406

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
            +   GK+ +A  +++EM   G  P     NLL++   +  R++E+  + E+ ++     
Sbjct: 407 GFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAV 466

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +   F  +I R C+  + + A  +L         P+ +TY+ +I    K+G I+E  +L 
Sbjct: 467 NAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELT 526

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            +M  K I PT   Y ++I    Q G++E+
Sbjct: 527 LKMLKKGIDPTPVTYRTVIHRYGQIGRVED 556



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 130/277 (46%), Gaps = 4/277 (1%)

Query: 51  ENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE 110
           E    PN  T   ++    + G+L    D++  + GK   P  +    L+  + +  R++
Sbjct: 391 EQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVD 450

Query: 111 EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI 170
           E    ++  L      + + ++ +++   +  ++E+AL + ++M       ++  YTT I
Sbjct: 451 EAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTII 510

Query: 171 GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
            A  + G+IEEA  L  +M   G+ P   T+  +I    +  R+E+ L+  ++M++R+  
Sbjct: 511 DALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQ-- 568

Query: 231 PSC-SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
             C +AFN++I +LC  GN + A+ +L   L      +  T   L+  Y ++G      K
Sbjct: 569 -ECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYK 627

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +   M  +S+ P L     +   L Q GK EEAD  F
Sbjct: 628 VACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLF 664



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 111/242 (45%), Gaps = 4/242 (1%)

Query: 133 LIVYAKV-KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++ Y++  K+RN   A+ V   M K G   N  V  T I        +E+A   ++ M+ 
Sbjct: 125 MVSYSRAGKLRN---AMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQL 181

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+N LI+G     R+E+++    +M  +   P   ++  ++  LC+    ++
Sbjct: 182 LGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIRE 241

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
              ++    D     +++TY+ LI    K     E L+   E + +        Y++++ 
Sbjct: 242 VMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVD 301

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           S C+ G++++A +    M +   +P V  Y +++    + G   +A  + ++M   G KP
Sbjct: 302 SYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKP 361

Query: 372 ST 373
           +T
Sbjct: 362 NT 363



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 115/248 (46%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           HD I Y +++    K +  + A  V   M++RG       +   + +Y   GK+  A  +
Sbjct: 81  HDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQV 140

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M+ AG++P     N  I     A  +E++L + E+M    ++P+   +N +I+  C+
Sbjct: 141 LTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCD 200

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
               + A  +++    KG SP++++Y  ++G   K   I+EV+ +  +ME   +      
Sbjct: 201 LHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVT 260

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI  LC+    +EA ++ +  +          Y ++V  + ++G   +A  +  EM 
Sbjct: 261 YNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMF 320

Query: 366 SEGLKPST 373
           + G  P  
Sbjct: 321 TRGCIPDV 328


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 2/363 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL  + + V + + + G   ++  FN LIH   KS   +   ++   M     +P+  T 
Sbjct: 176 RLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY 235

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLIS  CK G     + + DR+     SP ++   SLI    +E R+ E + L + +  
Sbjct: 236 NTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREING 295

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
               H  + Y+ ++    ++ +LE AL + E M   G       Y + +   CE GKI++
Sbjct: 296 ATPNH--VTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           AN L+ EM    ++P + T N LI    K   +  ++   ++M+   L P    F  +I 
Sbjct: 354 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIH 413

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+      A   L   LD GFSP+  TYS L+  Y  +   + V++L  E+  K +  
Sbjct: 414 GFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFV 473

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI  LC+  K+E A++ F +M+   +     +Y SL   + + G    A  + 
Sbjct: 474 DISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDML 533

Query: 362 EEM 364
           +EM
Sbjct: 534 DEM 536



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 145/306 (47%), Gaps = 2/306 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G S  ++++N+LI+   +  R     R+++ +  N   PN  T  TLI   C+   
Sbjct: 258 MERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVND 315

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  + + + +  +   P V+   S++ ++ +E +I++   LL  M  + +  D +  + 
Sbjct: 316 LEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT 375

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K+ ++ SA+ V ++ML+ G   + F +   I  +C+  +++ A   + EM +AG
Sbjct: 376 LINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 435

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T++ L++        E  +   +++  + L    S +  +IRRLC+    + A 
Sbjct: 436 FSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAE 495

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            + TL   KG   + + Y+ L   Y K G+      +  EM+ + +  TL  Y    +S 
Sbjct: 496 RIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASY 555

Query: 314 CQCGKL 319
              G +
Sbjct: 556 AGDGSI 561



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 2/214 (0%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
            +NS + +  +  Y      ++A  + + M   G KP+     +L+   AKA+       
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 183

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             ++M+   ++P+   FN +I   C+ G+ ++A  +L     +   P+  TY+ LI  Y 
Sbjct: 184 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+G   E L +   ME   +SP +  Y SLI   C+ G++ EA + F+  + +   P   
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFR--EINGATPNHV 301

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Y +L+  +    +  +AL L E M  EGL P  
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGV 335



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 69/173 (39%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V + + + G      +F  LIH   K    D        ML+    P+ +T   L+ 
Sbjct: 389 AMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVD 448

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +       +  + + D +  K     + V  +LI R+ + ++IE    +   M  K M  
Sbjct: 449 SYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKG 508

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           D++ Y+ + YA  K     +A  + +EM KR       +Y  F  +Y   G I
Sbjct: 509 DSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 561


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 183/376 (48%), Gaps = 3/376 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R  E +    S++SFN+++    K    D+    +  +L+    P+  +   LI+ LC  
Sbjct: 211 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 270

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +   +++   ++     P  +    L         I     +++ ML K +  D I Y
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY-TTFIGAYCEYGKIEEANCLMQEME 190
           ++++  + ++ N++  LV+ ++ML RGF  NS +  +  +   C+ G+I+EA  L  +M+
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             GL P    ++++I G  K  + + +L   ++M  +++LP+      ++  LC+ G   
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L   +  G + + + Y+ +I GYAK G I+E L+L+  +    I+P++  + SLI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+   + EA K   ++K + L P V  Y +L+  +   GN      L  EM +EG+ 
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570

Query: 371 PS--TSYLCSASTCRG 384
           P+  T  +     CRG
Sbjct: 571 PTNVTYSVIFKGLCRG 586



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 161/345 (46%), Gaps = 13/345 (3%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           W + + ML+    P+  T   L+   C+ G +   + +L  +  +      I+  S++L 
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371

Query: 103 -IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            + +  RI+E + L  +M    +  D +AYS++++   K+   + AL +Y+EM  +    
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           NS  +   +   C+ G + EA  L+  + ++G       +N++I+G AK+  IEE+L   
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + ++   + PS + FN +I   C+  N  +A  +L +    G +P+ ++Y+ L+  YA  
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK------------LEEADKYFKIM 329
           G  + + +L  EM+ + I PT   Y+ +   LC+  K             E+  +  + M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +S  + P    Y +++       + + A    E M S  L  S++
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 164/372 (44%), Gaps = 19/372 (5%)

Query: 17  RGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           RGF L S+I  + ++  + K+ R D    ++  M  +   P+      +I  LCK G+  
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + + D +  KR  P    + +L+L + Q+  + E   LL  ++      D + Y++++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +E AL +++ +++ G + +   + + I  YC+   I EA  ++  ++  GL 
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535

Query: 196 PYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           P   ++  L++    C   K I+E      +M +  + P+   ++ + + LC     +  
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592

Query: 253 NGMLTLAL------------DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           N +L   +             +G  P++ITY+ +I    +   +         M+ +++ 
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            +   Y  LI SLC  G + +AD +   ++  ++      Y +L+  H  KG+   A+ L
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712

Query: 361 CEEMVSEGLKPS 372
             +++  G   S
Sbjct: 713 FHQLLHRGFNVS 724



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/356 (20%), Positives = 154/356 (43%), Gaps = 47/356 (13%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +   ++  G S  L++++ +IH + K  + D+   +Y  M +    PN  T   L+ 
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G L     +LD +     +  +++   +I    +   IEE + L K ++   +  
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------------- 173
               ++ ++Y   K +N+  A  + + +   G + +   YTT + AY             
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561

Query: 174 ----------------------CEYGKIEEANCLMQE------------MENAGLKPYDE 199
                                 C   K E  N +++E            ME+ G+ P   
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N +I+   + K +  +  + E M SR L  S + +N +I  LC  G  ++A+  +   
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            ++  S ++  Y+ LI  +  +G+ +  +KL++++ ++  + ++  Y+++I+ LC+
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 161/353 (45%), Gaps = 32/353 (9%)

Query: 36  SDRNDL-VWRIYQHMLENIRYPNEATIRTLISALCKGGQ-----LQTYVDMLDRIHG--K 87
           S+ +DL VW   +  L +I     ++  TL+ +    GQ     LQ  ++ L +  G  +
Sbjct: 61  SESSDLSVWFFKE--LRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFR 118

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           +     +V   L+    +   +++ + +LK+M  +N+   T +Y+ ++Y     R  +  
Sbjct: 119 KWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLY---HFRETDKM 175

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             VY+E+  +    N   Y+T +   C   K+E+A   ++  E   + P   +FN ++ G
Sbjct: 176 WDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG 231

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGF 264
             K   ++ + S+   ++   L+PS  + N +I  LC  G+  +A   L LA D    G 
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA---LELASDMNKHGV 288

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ +TY+ L  G+   G I    ++  +M  K +SP +  YT L+   CQ G ++    
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348

Query: 325 YFKIMKS-----HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             K M S     +S++P   +   L     + G   +AL L  +M ++GL P 
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLC----KTGRIDEALSLFNQMKADGLSPD 397



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/279 (19%), Positives = 128/279 (45%), Gaps = 12/279 (4%)

Query: 106 EERIEEGMVLLKRMLR-----KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
           + R +E  V+L+++L+     +      + + ++++   ++R ++ +L + ++M  +  +
Sbjct: 97  QRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLN 156

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            ++  Y + +  + E  K+ +   + +E+++      + T++ +++G  + +++E+++ +
Sbjct: 157 VSTQSYNSVLYHFRETDKMWD---VYKEIKDKN----EHTYSTVVDGLCRQQKLEDAVLF 209

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                 + + PS  +FN ++   C+ G    A       L  G  P+  +++ LI G   
Sbjct: 210 LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCL 269

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G I E L+L  +M    + P    Y  L       G +  A +  + M    L P V  
Sbjct: 270 VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           Y  L+    + GN    L L ++M+S G + ++   CS 
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 175/361 (48%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           + +N +I  + K+   +  + +Y  M+     P++ T  +LI   C  GQL+  V +L +
Sbjct: 211 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHK 270

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +  +P +   + L+    +E +++E  ++L   ++K++I D + Y+ ++     ++ 
Sbjct: 271 MILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKE 330

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A  +++ M  RG  AN   YTT I   C+   ++EA  L +EM    + P   T+N 
Sbjct: 331 INKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNS 390

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  K  +I   L   ++M  R   P+   +N ++  LC+  +  +A  +LT   D+G
Sbjct: 391 LIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQG 450

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+  TY+ LI G  + G++++  K++ ++  K  +  +  YT +I   C  G  + A 
Sbjct: 451 IRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAAL 510

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCR 383
                M+ +  +P    YE ++    EK     A  L  EM++ GL    SY+  AS   
Sbjct: 511 ALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKSYIYLASKET 570

Query: 384 G 384
           G
Sbjct: 571 G 571



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 165/366 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + +E  G      +FN LI+  ++   N L + ++  +L+    PN  T  TLI 
Sbjct: 89  ALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIK 148

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G +   ++  D++  +      +   +LI  + +  RI   + LLKR+  K +  
Sbjct: 149 GLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 208

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++I+    K + +  A  +Y +M+ +  S + F   + I  +C  G+++EA  L+
Sbjct: 209 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLL 268

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M    + P   TF++L++   K  +++E+       M + ++     +N ++   C  
Sbjct: 269 HKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLV 328

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +      +G   N  +Y+ +I G  K   + E + L+ EM  + I P +  Y
Sbjct: 329 KEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTY 388

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  L + GK+    K    M      P +  Y S++    +  +  KA+ L   +  
Sbjct: 389 NSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKD 448

Query: 367 EGLKPS 372
           +G++P 
Sbjct: 449 QGIRPD 454



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 146/290 (50%), Gaps = 8/290 (2%)

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV--YAKVKM 141
           +H K  +P +I    ++  +++ +     + L ++M    ++ D   +++++  ++++ +
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L  +  V+ ++LK+GF  N+  + T I   C  G I +A     ++   G      ++
Sbjct: 121 NSL--SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSY 178

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI G  K  RI  +L   +++  + + P+   +N +I  +C+      A  + +  + 
Sbjct: 179 GTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVA 238

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  SP++ T + LI G+   G+++E + L ++M  ++I+P +  ++ L+ + C+ GK++E
Sbjct: 239 KRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKE 298

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIH--LEKGNKAKALHLCEEMVSEGL 369
           A     +     ++  V  Y SL+  +  +++ NKAK +   + M S G+
Sbjct: 299 AKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIF--DSMASRGV 346



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 110/224 (49%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +  RG   ++ S+ T+I+ + K    D    +++ M      PN  T  +LI 
Sbjct: 334 AKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLID 393

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K G++   + ++D +H +   P +I   S++  + +   +++ + LL  +  + +  
Sbjct: 394 GLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRP 453

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    +   LE A  V+E++L +G++ + + YT  I  +C  G  + A  L+
Sbjct: 454 DMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALL 513

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
            +ME+ G  P  +T+ ++I    +    + +     +M++R LL
Sbjct: 514 SKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLL 557


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 160/338 (47%), Gaps = 8/338 (2%)

Query: 42  VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
           +WR Y   L+N      AT   ++ +LC+ G+ +   +   R+      P V+  T+ I 
Sbjct: 199 MWR-YGFSLDN------ATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWID 251

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FS 160
            + +   +++   +L+ M+ + +  +   ++ ++    K+   E A  ++ +++K   + 
Sbjct: 252 GLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK 311

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            N   YT  IG YC  GK+  A  L+  M   GLKP   T+  LI G  K    + +   
Sbjct: 312 PNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFEL 371

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
             +M     LP+   +N +I   C+ G  ++A  +L +A  +G   ++ITY+ LI  + K
Sbjct: 372 MNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCK 431

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           +G I   L L+  M      P + AYTSLIS+ CQ  ++EE+ K+F       L+P    
Sbjct: 432 QGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQT 491

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           Y S++  + + G    AL + E MV  G    +  +CS
Sbjct: 492 YTSMIAGYCKVGRSTMALRVFERMVQNGCFADSILMCS 529



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 15/318 (4%)

Query: 61  IRTLISALCKGGQLQTYVDML--DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           +R +++A  + G+L    DM+   R HG    P+ +   + +LR+     +E G  +  R
Sbjct: 106 MRGMVAAFGEAGRLPEAADMVLEMRSHG---LPLCVETANWVLRV----GLETGSFVYAR 158

Query: 119 -----MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
                M R  +  D  ++  +V    +   +E    +   M + GFS ++   T  + + 
Sbjct: 159 KVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSL 218

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           CE G+ ++ +   + M   G  P    +   I+G  K + ++++    E+M+ R L P+ 
Sbjct: 219 CEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 278

Query: 234 SAFNEMIRRLCECGNAKQANGM-LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
                +I  LC+ G  ++A  + L L     + PN  TY+ +IGGY +EG++     L  
Sbjct: 279 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV 338

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            M  + + P    YT+LI   C+ G  + A +    MK    +P +  Y +++    +KG
Sbjct: 339 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 398

Query: 353 NKAKALHLCEEMVSEGLK 370
              +A  +     S+GLK
Sbjct: 399 KIQEAYKVLRMATSQGLK 416



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 128/292 (43%), Gaps = 1/292 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+   +  R + + G   +++++   I  + K       + + + M+     PN  T  T
Sbjct: 224 FKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 283

Query: 64  LISALCK-GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           LI  LCK G   + +   L  I      P V   T +I    +E ++    +LL RM+ +
Sbjct: 284 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 343

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +T  Y+ ++    K  + + A  +  +M + GF  N + Y   I  +C+ GKI+EA
Sbjct: 344 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 403

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +++   + GLK    T+ +LI    K   I  +L   ++M+     P   A+  +I  
Sbjct: 404 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 463

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            C+    +++       L  G  P + TY+ +I GY K G     L+++  M
Sbjct: 464 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERM 515



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%)

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           E    ++    +A R+ E+     +M S  L       N ++R   E G+   A  +   
Sbjct: 104 EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 163

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
               G  P+E ++  L+    +EG+++EV  L   M     S      T ++ SLC+ G+
Sbjct: 164 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 223

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++  ++F+ M      P V  Y + +    ++    +A H+ EEMV  GLKP+
Sbjct: 224 FKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN 277



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 36/214 (16%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +EQ G   +  ++ TLI    K    D  + +   M +    PN  T   +I   CK 
Sbjct: 339 RMVEQ-GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKK 397

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++Q                                   E   +L+    + +  D I Y
Sbjct: 398 GKIQ-----------------------------------EAYKVLRMATSQGLKFDKITY 422

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++    K  ++  AL +++ M++ G   +   YT+ I  YC+  ++EE+     +   
Sbjct: 423 TILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLM 482

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
            GL P  +T+  +I G  K  R   +L   E+M+
Sbjct: 483 IGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMV 516


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 158/323 (48%), Gaps = 2/323 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            ++  LI   + +   D+  ++ + M  N    N     TL+  LC  G++   ++   R
Sbjct: 10  FTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF-R 68

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
              K C+P V+  T+L+  + +  + +E   +L+ M+ +    DT+ +S ++    K  +
Sbjct: 69  AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYDETFN 202
            E A  V E++++RG   +   + T I   C +Y  +E A+ ++  +   G  P    FN
Sbjct: 129 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 188

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           L+I G  KAK ++ +    E M+ +  +P+   F  +I  LC+     +A  +L   +  
Sbjct: 189 LVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTG 248

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G SPN +TYS +I G  K+G++ +  +L+  ME ++  P +  +  LI  LC+  ++EEA
Sbjct: 249 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 308

Query: 323 DKYFKIMKSHSLVPGVDIYESLV 345
            + +  M+     P +  Y SL+
Sbjct: 309 RQLYHRMRETGCAPDIITYNSLI 331



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 174/367 (47%), Gaps = 2/367 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  + R +  RG +   ++F+TLI  + K    +  +R+ + +++     ++A   T
Sbjct: 94  FDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFET 153

Query: 64  LISALC-KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +I  LC K   ++    +L  +  K  +P V++   +I    + + ++    LL+ M+ K
Sbjct: 154 IIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 213

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + +   +++++    K   +  A  + E+M+  G S N   Y+T I   C+ G++++A
Sbjct: 214 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDA 273

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L Q ME     P   T N+LI+G  KAKRIEE+     +M      P    +N +I  
Sbjct: 274 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 333

Query: 243 LCECGNAKQANGMLTLALDKGFS-PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           LC+     +A  +     + G S  N +TYS L  GYA  G + +  +++  +  K  SP
Sbjct: 334 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 393

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            L  YTSLI   C+  +  E  +  + M S    P V+   +++G   E  +  +A+ L 
Sbjct: 394 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 453

Query: 362 EEMVSEG 368
           + M + G
Sbjct: 454 DSMAARG 460



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 179/396 (45%), Gaps = 39/396 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S ++++++T+I+ + K  + D  + ++Q M      PN  T   LI  LCK  +++  
Sbjct: 249 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 308

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM-IHDTIAYSLIVY 136
             +  R+    C+P +I   SLI  + +  +++E   L + +    +   + + YS + +
Sbjct: 309 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFH 368

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
               +  +  A  ++  ++ +GFS +   YT+ I  YC+  +  E   L++EM + G  P
Sbjct: 369 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 428

Query: 197 YDET-----------------------------------FNLLIEGCAKAKRIEESLSYC 221
              T                                   +NL++EG A+A +  ++L+  
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488

Query: 222 EQMMS---RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           EQ++    RK  PS SA + ++  LC+ G    A  +L    ++GF+    +Y+ L+ G 
Sbjct: 489 EQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGL 548

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           ++     E  +++  M     +P +     +IS LC   K+++A +  + M      P +
Sbjct: 549 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 608

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +   +L+G + + G    A  L EEM   GL+P+ +
Sbjct: 609 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDT 644



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 165/357 (46%), Gaps = 2/357 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++  L+H + K+ + D    + + M+     P+  T  TLI  LCK G  +    +L
Sbjct: 77  DVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 136

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQE-ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           + +  +          ++I R+  +   +E    +L  ++ K      + ++L++    K
Sbjct: 137 EDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCK 196

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            ++L+SA  + E M+++G   N F +T  I   C+  ++ EA  L+++M   G  P   T
Sbjct: 197 AKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVT 256

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I G  K  +++++    + M  R   P+    N +I  LC+    ++A  +     
Sbjct: 257 YSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 316

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT-LPAYTSLISSLCQCGKL 319
           + G +P+ ITY+ LI G  K  ++ E  +L+  +    +S      Y++L       G++
Sbjct: 317 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 376

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            +A + F ++      P +  Y SL+  + +     + + L EEM S+G  P  + L
Sbjct: 377 ADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 37/324 (11%)

Query: 50  LENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI 109
           +  I  PN+ T   LI      G L   + +L+ +         +V+T+L+  +    R+
Sbjct: 1   MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
            E +    R + K+   D + Y+ +V+A                                
Sbjct: 61  VEALEHF-RAMAKDCAPDVMTYTALVHA-------------------------------- 87

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
               C+ GK +EA  +++EM   G  P   TF+ LI+G  K    E++    E ++ R +
Sbjct: 88  ---LCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 144

Query: 230 LPSCSAFNEMIRRLCECGNAKQ-ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             S +AF  +I+RLC   N+ + A+ +L + + KGF+P  + ++ +I G+ K  ++    
Sbjct: 145 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 204

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           KL   M  K   P +  +T LI+ LC+  ++ EA +  + M +    P V  Y +++   
Sbjct: 205 KLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGL 264

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G    A  L + M      P+
Sbjct: 265 CKQGQVDDAYELFQLMERRNCPPN 288



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 41/312 (13%)

Query: 4   FEV--AFDVCRYLEQRGFSLS-LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           F+V  AF + + + + G S +  ++++TL H      R     RI+  +++    P+ AT
Sbjct: 338 FQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLAT 397

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +LI   CK  +    V++++ +  K   P V   ++++  + +    E  + L   M 
Sbjct: 398 YTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMA 457

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK---RGFSANSFVYTTFIGAYCEYG 177
            +    D + Y+L+V    +      AL V E+++    R F+ +S      + + C+ G
Sbjct: 458 ARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVG 517

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           + ++A  L+ +M   G      ++N L+ G ++ +R +E+    E M+S    P  S  N
Sbjct: 518 RTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVN 577

Query: 238 ----------------EMIRRL-------------------CECGNAKQANGMLTLALDK 262
                           E+++R+                   C+ G A  A  +L    + 
Sbjct: 578 VVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEA 637

Query: 263 GFSPNEITYSHL 274
           G  PN+ T+  L
Sbjct: 638 GLEPNDTTHDLL 649



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN+ TY  LI G++  G++   ++L  EM+          +T+L+  LC  G++ EA ++
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           F+ M +    P V  Y +LV    + G   +A  +  EM++ G  P T
Sbjct: 67  FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDT 113


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 183/376 (48%), Gaps = 3/376 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R  E +    S++SFN+++    K    D+    +  +L+    P+  +   LI+ LC  
Sbjct: 211 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 270

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +   +++   ++     P  +    L         I     +++ ML K +  D I Y
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY-TTFIGAYCEYGKIEEANCLMQEME 190
           ++++  + ++ N++  LV+ ++ML RGF  NS +  +  +   C+ G+I+EA  L  +M+
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             GL P    ++++I G  K  + + +L   ++M  +++LP+      ++  LC+ G   
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L   +  G + + + Y+ +I GYAK G I+E L+L+  +    I+P++  + SLI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+   + EA K   ++K + L P V  Y +L+  +   GN      L  EM +EG+ 
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570

Query: 371 PS--TSYLCSASTCRG 384
           P+  T  +     CRG
Sbjct: 571 PTNVTYSVIFKGLCRG 586



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 161/345 (46%), Gaps = 13/345 (3%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           W + + ML+    P+  T   L+   C+ G +   + +L  +  +      I+  S++L 
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371

Query: 103 -IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            + +  RI+E + L  +M    +  D +AYS++++   K+   + AL +Y+EM  +    
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           NS  +   +   C+ G + EA  L+  + ++G       +N++I+G AK+  IEE+L   
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + ++   + PS + FN +I   C+  N  +A  +L +    G +P+ ++Y+ L+  YA  
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK------------LEEADKYFKIM 329
           G  + + +L  EM+ + I PT   Y+ +   LC+  K             E+  +  + M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +S  + P    Y +++       + + A    E M S  L  S++
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 164/372 (44%), Gaps = 19/372 (5%)

Query: 17  RGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           RGF L S+I  + ++  + K+ R D    ++  M  +   P+      +I  LCK G+  
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + + D +  KR  P    + +L+L + Q+  + E   LL  ++      D + Y++++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +E AL +++ +++ G + +   + + I  YC+   I EA  ++  ++  GL 
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535

Query: 196 PYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           P   ++  L++    C   K I+E      +M +  + P+   ++ + + LC     +  
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592

Query: 253 NGMLTLAL------------DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           N +L   +             +G  P++ITY+ +I    +   +         M+ +++ 
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            +   Y  LI SLC  G + +AD +   ++  ++      Y +L+  H  KG+   A+ L
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712

Query: 361 CEEMVSEGLKPS 372
             +++  G   S
Sbjct: 713 FHQLLHRGFNVS 724



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/356 (20%), Positives = 154/356 (43%), Gaps = 47/356 (13%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +   ++  G S  L++++ +IH + K  + D+   +Y  M +    PN  T   L+ 
Sbjct: 382 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G L     +LD +     +  +++   +I    +   IEE + L K ++   +  
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------------- 173
               ++ ++Y   K +N+  A  + + +   G + +   YTT + AY             
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561

Query: 174 ----------------------CEYGKIEEANCLMQE------------MENAGLKPYDE 199
                                 C   K E  N +++E            ME+ G+ P   
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N +I+   + K +  +  + E M SR L  S + +N +I  LC  G  ++A+  +   
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            ++  S ++  Y+ LI  +  +G+ +  +KL++++ ++  + ++  Y+++I+ LC+
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 22/272 (8%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ + +LK+M  +N+   T +Y+ ++Y     R  +    VY+E+  +    N   Y+T
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLY---HFRETDKMWDVYKEIKDK----NEHTYST 192

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +   C   K+E+A   ++  E   + P   +FN ++ G  K   ++ + S+   ++   
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGFSPNEITYSHLIGGYAKEGEIQ 285
           L+PS  + N +I  LC  G+  +A   L LA D    G  P+ +TY+ L  G+   G I 
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEA---LELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS-----HSLVPGVDI 340
              ++  +M  K +SP +  YT L+   CQ G ++      K M S     +S++P   +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              L     + G   +AL L  +M ++GL P 
Sbjct: 370 LSGLC----KTGRIDEALSLFNQMKADGLSPD 397



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/279 (19%), Positives = 128/279 (45%), Gaps = 12/279 (4%)

Query: 106 EERIEEGMVLLKRMLR-----KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
           + R +E  V+L+++L+     +      + + ++++   ++R ++ +L + ++M  +  +
Sbjct: 97  QRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLN 156

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            ++  Y + +  + E  K+ +   + +E+++      + T++ +++G  + +++E+++ +
Sbjct: 157 VSTQSYNSVLYHFRETDKMWD---VYKEIKDKN----EHTYSTVVDGLCRQQKLEDAVLF 209

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                 + + PS  +FN ++   C+ G    A       L  G  P+  +++ LI G   
Sbjct: 210 LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCL 269

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G I E L+L  +M    + P    Y  L       G +  A +  + M    L P V  
Sbjct: 270 VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           Y  L+    + GN    L L ++M+S G + ++   CS 
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 167/348 (47%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L + N ++  + K+     VW ++  ML     P+  T  TLI+A    G +    ++ 
Sbjct: 137 ALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVW 196

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D++  +R  P V+  T++I  + +E+ I +   L   M    M  +   Y+ ++ +  K 
Sbjct: 197 DQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKR 256

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N++ ALV Y ++LK G   N  ++TT I   C+  +I EA  +  +M    + P    +
Sbjct: 257 DNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVY 316

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G  ++   +E+L++ ++++ ++L P     + ++R LC+ G  + A   L +   
Sbjct: 317 NSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQ 376

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G + N   Y+ LI  Y K G + E L     M    + P +  Y+SLI    + G++E 
Sbjct: 377 SGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEI 436

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           A   +  M +  + P V  Y +L+  H + G+   A  L +EM  +G+
Sbjct: 437 AMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGI 484



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 161/365 (44%), Gaps = 6/365 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   +L ++N L+    K D        Y  +L+    PN+    TLI  LCK  +
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANR 293

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    ++   +     +P V V  SLI    +    +E +   + ++RK +  D    S+
Sbjct: 294 ITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSI 353

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V        ++ A    E M + G + N+  Y   I  YC+ G ++EA      M   G
Sbjct: 354 VVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVG 413

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   T++ LI+G +K   +E +++   +M+++ + P+   +  +I    + G+   A 
Sbjct: 414 VEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAF 473

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA------YT 307
            +     +KG   N IT S L+ G  +E  +Q+ ++   E   +  S   P+      Y 
Sbjct: 474 WLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYM 533

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +LI  L   G+  EA  +F  M+   +VP    Y  ++      G    A+ L  +MV  
Sbjct: 534 TLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKV 593

Query: 368 GLKPS 372
           G+KP+
Sbjct: 594 GVKPT 598



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 140/318 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P       ++  L K   L    ++ D + G+   P V+   +LI     +  + +   +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             +M+ + +  + + Y+ ++YA  +   +  A  ++ EM + G   N + Y   + ++ +
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              I+ A     ++   GL P D  F  LI+G  KA RI E+ +    M   ++ P+   
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I      G A++A       + K   P+E T S ++ G    G++Q   +    M+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              I+    AY  LI   C+ G L+EA      M    + P V  Y SL+  H + G   
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435

Query: 356 KALHLCEEMVSEGLKPST 373
            A+ +  EMV++G++P+ 
Sbjct: 436 IAMAIYTEMVAKGVEPNV 453



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
              +L+   ++    +E+LS   ++     LP+C   N ++  L +     +   +    
Sbjct: 108 ALGVLVIALSQMALPDEALSVFGRLRELPALPAC---NAILDGLVKAHMLARVWELFDEM 164

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L +G  P+ +TY+ LI     +G++ +  +++ +M  + I P +  YT++I +LC+   +
Sbjct: 165 LGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCI 224

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +A+  F  MK   + P +  Y +L+  H ++ N   AL    +++  GL P+
Sbjct: 225 GDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPN 277



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 78/196 (39%), Gaps = 6/196 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A   C  + + G   +++++++LI   +K+   ++   IY  M+     PN  T   LI 
Sbjct: 402 ALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIH 461

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL------KRML 120
              K G +     +   +  K      I  + L+  + +E R+++ +  +      K+  
Sbjct: 462 GHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSE 521

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +   I +++ Y  ++Y          A   +  M   G   + F YT  I   C  G + 
Sbjct: 522 KNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 581

Query: 181 EANCLMQEMENAGLKP 196
            A  L  +M   G+KP
Sbjct: 582 NAMMLYADMVKVGVKP 597



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 73/160 (45%), Gaps = 6/160 (3%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+A  +   +  +G   +++++  LIH   K+   D  + + + M E   Y N  T+  L
Sbjct: 435 EIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVL 494

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCS---PMV---IVNTSLILRIIQEERIEEGMVLLKR 118
           +  LC+  ++Q  V  +    G++ S   P +   +   +LI  +  + +  E       
Sbjct: 495 VDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSC 554

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           M    M+ D   Y+L++     +  + +A+++Y +M+K G
Sbjct: 555 MRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVG 594


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 168/352 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+    ++  +L++   + +R      +   M+E    P+      +I +LCK  ++   
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D    I  K   P V+  T+L+  +    R  +   LL  M++K +  + I YS ++ A
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK   +  A  ++EEM++     +   Y++ +   C + +I+EAN +   M + G    
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLAD 329

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N LI G  KAKR+E+ +    +M  R L+ +   +N +I+   + G+  +A    +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G SP+  TY+ L+GG    GE+++ L ++ +M+ + +   +  YT++I  +C+ G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           K+EEA   F  +    L P +  Y +++     KG   +   L  +M  EGL
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 174/372 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ ++V   + + +E  G    L +FN +I+      +  L   I   ML+    P+  T
Sbjct: 98  LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           I +L++  C+  ++   V ++D++      P ++   ++I  + + +R+ +     K + 
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           RK +  + + Y+ +V           A  +  +M+K+  + N   Y+  + A+ + GK+ 
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L +EM    + P   T++ L+ G     RI+E+    + M+S+  L    ++N +I
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+    +    +      +G   N +TY+ LI G+ + G++ +  + + +M++  IS
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y  L+  LC  G+LE+A   F+ M+   +   +  Y +++    + G   +A  L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457

Query: 361 CEEMVSEGLKPS 372
              +  +GLKP 
Sbjct: 458 FCSLSLKGLKPD 469



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 171/366 (46%), Gaps = 8/366 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+   ++++N +I  + K+ R +  +  ++ +      PN  T   L++ LC   +    
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  K+ +P VI  ++L+   ++  ++ E   L + M+R ++  D + YS +V  
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 ++ A  +++ M+ +G  A+   Y T I  +C+  ++E+   L +EM   GL   
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI+G  +A  ++++  +  QM    + P    +N ++  LC+ G  ++A  +  
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +    + +TY+ +I G  K G+++E   L+  +  K + P +  YT+++S LC  G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
            L E +  +  MK   L+             L  G+   +  L ++M+S G  PS     
Sbjct: 485 LLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLLKDI 536

Query: 378 SASTCR 383
            +  C+
Sbjct: 537 KSGVCK 542



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 145/301 (48%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L   +D+   +   R  P ++    L+  I++ ++ +  + L K+M    + +D   ++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++        +  AL +  +MLK G+  +     + +  +C   ++ +A  L+ +M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G KP    +N +I+   K KR+ ++  + +++  + + P+   +  ++  LC       A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L+  + K  +PN ITYS L+  + K G++ E  +L+ EM   SI P +  Y+SL++ 
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC   +++EA++ F +M S   +  V  Y +L+    +       + L  EM   GL  +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 373 T 373
           T
Sbjct: 365 T 365



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 123/265 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           +++ ++ + + L   M++       + ++ ++ A VK++  +  + + ++M   G   + 
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + +   I  +C   ++  A  ++ +M   G +P   T   L+ G  +  R+ +++S  ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P   A+N +I  LC+      A         KG  PN +TY+ L+ G      
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
             +  +L  +M  K I+P +  Y++L+ +  + GK+ EA + F+ M   S+ P +  Y S
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEG 368
           LV          +A  + + MVS+G
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKG 325



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 82/187 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G    ++S+NTLI+   K+ R +   ++++ M +     N  T  TLI    + G + 
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              +   ++     SP +     L+  +     +E+ +V+ + M ++ M  D + Y+ ++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +E A  ++  +  +G   +   YTT +   C  G + E   L  +M+  GL 
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502

Query: 196 PYDETFN 202
             D T +
Sbjct: 503 KNDCTLS 509


>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
           protein-like proteins; contains similarity to Pfam
           family PF01535 (Domain of unknown function),
           score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
 gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 175/373 (46%), Gaps = 8/373 (2%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE------NIRYPNEATIR 62
           D+   +++      +++   LI+ + KS R D    +++ M        N+   +     
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374

Query: 63  TLISALCKGGQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           TLI  LCK G+L+   ++L R+   +RC P  +    LI    +  ++E    ++ RM  
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  + +  + IV    +   L  A+V + +M K G   N   Y T I A C    +E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A    ++M  AG  P  + +  LI G  + +R  +++   E++          A+N +I 
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+  NA++   MLT    +G  P+ ITY+ LI  + K  + + V ++  +M    + P
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIYESLVGIHLEKGNKAKALHL 360
           T+  Y ++I + C  G+L+EA K FK M  HS V P   IY  L+    + GN  +AL L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674

Query: 361 CEEMVSEGLKPST 373
            EEM  + ++P+ 
Sbjct: 675 KEEMKMKMVRPNV 687



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 141/346 (40%), Gaps = 37/346 (10%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           I FNTLI  + K  R      +   M LE    PN  T   LI   C+ G+L+T  +++ 
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           R+      P V+   +++  + +   +   +V    M ++ +  + + Y  +++A   + 
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490

Query: 143 NLESALVVYEEMLKRG-----------------------------------FSANSFVYT 167
           N+E A+  YE+ML+ G                                   FS +   Y 
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             IG +C+    E+   ++ +ME  G KP   T+N LI    K K  E      EQM   
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            L P+ + +  +I   C  G   +A  +   + L    +PN + Y+ LI  ++K G   +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            L L  EM+ K + P +  Y +L   L +  + E   K    M  H
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEH 716



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 5/250 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++ TLIH        +     Y+ MLE    P+      LIS LC+  +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +++++     S  ++    LI     +   E+   +L  M ++    D+I Y+ 
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NA 192
           ++    K ++ ES   + E+M + G       Y   I AYC  G+++EA  L ++M  ++
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P    +N+LI   +K     ++LS  E+M  + + P+   +N + +    C N K  
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK----CLNEKTQ 702

Query: 253 NGMLTLALDK 262
              L   +D+
Sbjct: 703 GETLLKLMDE 712


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 181/393 (46%), Gaps = 36/393 (9%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG      +FN L+ ++ KS+  +  WR++     N++  +  +   +I   C+ G L  
Sbjct: 124 RGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKL-DVYSFGIMIKGCCEVGYLDK 182

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV- 135
             ++L ++     SP V+V T+LI    +   IE G  L  +M   +++ +   Y++++ 
Sbjct: 183 GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLIN 242

Query: 136 --------------YAKVKMRN--------------------LESALVVYEEMLKRGFSA 161
                         Y K+K+                      L +A  +++EM +RG + 
Sbjct: 243 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 302

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           N   Y T IG  C+  ++ EA  LM  M+  GL P   ++N LI+G      ++++ S  
Sbjct: 303 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 362

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            QM S    PS + +N +I    E  N+     M+     +G SP+++TY+ L+    + 
Sbjct: 363 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 422

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
             I++  ++Y  ME   +   +  Y  LI  LC  G ++EA K FK +    L P   IY
Sbjct: 423 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 482

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +++  + ++G+  +AL L +EM   G+ P+ +
Sbjct: 483 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVA 515



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 132/286 (46%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T  ++I   C  G+L    ++ D +  +  +  V+   +LI  + QE R+ E   L
Sbjct: 267 PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL 326

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           + RM R  +  + I+Y+ ++     + NL+ A  ++ +M   G S +   Y   I  + E
Sbjct: 327 MCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSE 386

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
                    +++EME  GL P   T+ +L++   ++  IE++      M    L+     
Sbjct: 387 AKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI 446

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I  LC  G+ K+A+ +     +    PN++ Y+ +I GY KEG     L+L  EM 
Sbjct: 447 YGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMG 506

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
              + P + +Y S I  LC+  K  EA+   K M    L P + I+
Sbjct: 507 ENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIW 552



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 123/261 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   + +RG + +++++NTLI  + +  R     R+   M  +   PN  +  TLI 
Sbjct: 288 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLID 347

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G L     + +++     SP +     LI    + +       +++ M  + +  
Sbjct: 348 GYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP 407

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y++++ A V+  N+E A  +Y  M K G  A+ ++Y   I   C  G ++EA+ L 
Sbjct: 408 SKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLF 467

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + ++   LKP D  +N +I G  K      +L   ++M    ++P+ +++N  I+ LC+ 
Sbjct: 468 KSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKD 527

Query: 247 GNAKQANGMLTLALDKGFSPN 267
               +A  +L   ++ G  P+
Sbjct: 528 EKWTEAEVLLKDMIELGLKPS 548



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 110/236 (46%), Gaps = 1/236 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ E    +CR +++ G S +LIS+NTLI         D    ++  M  + + P+ AT 
Sbjct: 319 RVLEAERLMCR-MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATY 377

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI+   +        DM+  +  +  SP  +  T L+  +++ + IE+   +   M +
Sbjct: 378 NILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEK 437

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D   Y ++++    + +++ A  +++ + +     N  +Y T I  YC+ G    
Sbjct: 438 AGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYR 497

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           A  L++EM   G+ P   ++N  I+   K ++  E+    + M+   L PS S +N
Sbjct: 498 ALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWN 553



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 34/200 (17%)

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE------------------------- 238
           +I    +++  E++L Y  QM+ R L+P  + FN                          
Sbjct: 101 IINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNV 160

Query: 239 ---------MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
                    MI+  CE G   +   +L    + G SPN + Y+ LI G  K G+I+   +
Sbjct: 161 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQ 220

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L+Y+M    +      YT LI+   + G  ++  + ++ MK   +VP V  Y S++    
Sbjct: 221 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCC 280

Query: 350 EKGNKAKALHLCEEMVSEGL 369
             G    A  L +EM   G+
Sbjct: 281 NDGKLNNAFELFDEMRERGV 300


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 4/324 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDM 80
            ++S+ TLI+ + K  R D  + +++ M+      PN  T   L+  LCK  +L     +
Sbjct: 95  DVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAV 154

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           +     +  +P V+   +L+  + Q  R++E +    +M  +  +   ++++ I+    +
Sbjct: 155 ITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCR 214

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            R L  AL V+ EM+ R F  N   Y+  I   C+  +++EA  L+  M + G +P    
Sbjct: 215 ARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVA 274

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +  L+ G + A R++ +L    +M+S+  +P    +  +I +LC+ G    A+ +    +
Sbjct: 275 YTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELV 334

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
               SPN +TYS LIGGY +   + E  K+  EM  +   P +  Y ++I  L    + E
Sbjct: 335 ANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNE 391

Query: 321 EADKYFKIMKSHSLVPGVDIYESL 344
           EA   F+ M     VP    Y  L
Sbjct: 392 EAYGMFREMSECGFVPDARTYRGL 415



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 155/327 (47%), Gaps = 2/327 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S +++N LI     +   D  + + + M       N+ T   ++  LC+ G++   ++  
Sbjct: 24  SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83

Query: 82  D-RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLIVYAKV 139
           D  +      P V+  T+LI  + +  R++    L ++M+       +   Y+ +V    
Sbjct: 84  DASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLC 143

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   L++A  V  E  KR F+ +   Y T + A  + G+++EA     +M   G  P   
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           +FN +I G  +A+R+ ++L    +M+ R   P+   ++ +I  LC+     +A  +L   
Sbjct: 204 SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRM 263

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           + +G  P+ + Y+ L+ G++  G +   L L   M  +   P +  YT +I  LC+ G++
Sbjct: 264 VSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRV 323

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVG 346
           ++A + F+ + ++   P V  Y +L+G
Sbjct: 324 DDAHEIFRELVANKCSPNVVTYSALIG 350



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 3/230 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G+  +L+SFN +I  + ++ R      ++  M++   +PN  T   +I  LCK  Q
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     +LDR+  + C P ++  T L+L      R++  + LL+RM+ +  I D + Y++
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++ A  ++ E++    S N   Y+  IG YC   +++E   +M+EM    
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---A 369

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +P   T+N +I G +   R EE+     +M     +P    +  + R L
Sbjct: 370 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 3/259 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R F+  ++++NTL+  + +  R D     +  M E    P   +   +I+ LC+  +L 
Sbjct: 160 KRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLA 219

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++ + +  +   P ++  + +I  + + ++++E   LL RM+ +    D +AY+ +V
Sbjct: 220 DALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLV 279

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L+SAL +   M+ +G   +   YT  I   C+ G++++A+ + +E+      
Sbjct: 280 LGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS 339

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++ LI G  +A R++E      +M  R   P+   +N MI  L      ++A GM
Sbjct: 340 PNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGM 396

Query: 256 LTLALDKGFSPNEITYSHL 274
                + GF P+  TY  L
Sbjct: 397 FREMSECGFVPDARTYRGL 415



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 110/251 (43%), Gaps = 37/251 (14%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
             A+S  Y   I  +C    ++ A  L++EM+  G++  D T +++++G  +  R+ ++L
Sbjct: 21  LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQAL 80

Query: 219 SYCEQMMS-------------------------------RKLL------PSCSAFNEMIR 241
            + +  +                                RK++      P+   +N ++ 
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVD 140

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+      A  ++T A  + F+P+ +TY+ L+    + G + E L  + +M  +   P
Sbjct: 141 GLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           TL ++ ++I+ LC+  +L +A + F  M      P +  Y  ++    +     +A  L 
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 362 EEMVSEGLKPS 372
           + MVSEG +P 
Sbjct: 261 DRMVSEGCRPD 271


>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
 gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
           function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
           thaliana]
 gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
 gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
 gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 175/373 (46%), Gaps = 8/373 (2%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE------NIRYPNEATIR 62
           D+   +++      +++   LI+ + KS R D    +++ M        N+   +     
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374

Query: 63  TLISALCKGGQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           TLI  LCK G+L+   ++L R+   +RC P  +    LI    +  ++E    ++ RM  
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  + +  + IV    +   L  A+V + +M K G   N   Y T I A C    +E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A    ++M  AG  P  + +  LI G  + +R  +++   E++          A+N +I 
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+  NA++   MLT    +G  P+ ITY+ LI  + K  + + V ++  +M    + P
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIYESLVGIHLEKGNKAKALHL 360
           T+  Y ++I + C  G+L+EA K FK M  HS V P   IY  L+    + GN  +AL L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674

Query: 361 CEEMVSEGLKPST 373
            EEM  + ++P+ 
Sbjct: 675 KEEMKMKMVRPNV 687



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 142/351 (40%), Gaps = 37/351 (10%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           I FNTLI  + K  R      +   M LE    PN  T   LI   C+ G+L+T  +++ 
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           R+      P V+   +++  + +   +   +V    M ++ +  + + Y  +++A   + 
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490

Query: 143 NLESALVVYEEMLKRG-----------------------------------FSANSFVYT 167
           N+E A+  YE+ML+ G                                   FS +   Y 
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             IG +C+    E+   ++ +ME  G KP   T+N LI    K K  E      EQM   
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            L P+ + +  +I   C  G   +A  +   + L    +PN + Y+ LI  ++K G   +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            L L  EM+ K + P +  Y +L   L +  + E   K    M   S  P 
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 136/301 (45%), Gaps = 3/301 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++ TLIH        +     Y+ MLE    P+      LIS LC+  +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +++++     S  ++    LI     +   E+   +L  M ++    D+I Y+ 
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NA 192
           ++    K ++ ES   + E+M + G       Y   I AYC  G+++EA  L ++M  ++
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P    +N+LI   +K     ++LS  E+M  + + P+   +N + + L E    +  
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++   +++   PN+IT   L+   +   E+ ++ K  +   Y   SPT  A    + S
Sbjct: 707 LKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK--FMQGYSVASPTEKASPFDVFS 764

Query: 313 L 313
           L
Sbjct: 765 L 765


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 169/352 (48%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ FN L+  + K  + D+V  + + M          T   LI+  C+  Q+   + +L
Sbjct: 46  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 105

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++  +SL+      +RI + + L+ +M+      DTI ++ +++     
Sbjct: 106 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 165

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + + M++RG   N   Y   +   C+ G  + A  L+ +ME A ++     F
Sbjct: 166 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 225

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+   K + ++++L+  ++M ++ + P+   ++ +I  LC  G    A+ +L+  ++
Sbjct: 226 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 285

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +PN +T++ LI  + KEG+  E  KLY +M  +SI P +  Y SL++  C   +L++
Sbjct: 286 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 345

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A + F+ M S    P V  Y +L+    +         L  EM   GL   T
Sbjct: 346 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 397



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 162/353 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+++ ++L++      R      +   M+E    P+  T  TLI  L    +    
Sbjct: 112 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 171

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V ++DR+  + C P ++    ++  + +    +  + LL +M    +  D + ++ I+ +
Sbjct: 172 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 231

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R+++ AL +++EM  +G   N   Y++ I   C YG+  +A+ L+ +M    + P 
Sbjct: 232 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 291

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TFN LI+   K  +  E+    + M+ R + P    +N ++   C      +A  M  
Sbjct: 292 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 351

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + K   P+ +TY+ LI G+ K   +++  +L+ EM ++ +      YT+LI  L   G
Sbjct: 352 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             + A K FK M S  + P +  Y  L+      G   KAL + + M    +K
Sbjct: 412 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 168/386 (43%), Gaps = 35/386 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG   +L+++  +++ + K    DL   +   M       +     T+I +LCK   + 
Sbjct: 180 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 239

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  K   P V+  +SLI  +    R  +   LL  M+ K +  + + ++ ++
Sbjct: 240 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 299

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A VK      A  +Y++M+KR    + F Y + +  +C + ++++A  + + M +    
Sbjct: 300 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 359

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI+G  K+KR+E+      +M  R L+     +  +I+ L   G+   A  +
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 419

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
               +  G  P+ +TYS L+ G    G++++ L+++  M+                    
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479

Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
                           K + P +  Y ++IS LC    L+EA    K MK    +P    
Sbjct: 480 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 539

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVS 366
           Y +L+  HL  G+KA +  L  EM S
Sbjct: 540 YNTLIRAHLRDGDKAASAELIREMRS 565



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 172/372 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ F+V   +   +++      L ++N LI+   +  +  L   +   M++    P+  T
Sbjct: 60  MKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 119

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  I  T+LI  +    +  E + L+ RM+
Sbjct: 120 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 179

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    + + Y ++V    K  + + AL +  +M      A+  ++ T I + C+Y  ++
Sbjct: 180 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 239

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L +EME  G++P   T++ LI       R  ++      M+ +K+ P+   FN +I
Sbjct: 240 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 299

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TY+ L+ G+     + +  +++  M  K   
Sbjct: 300 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 359

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI   C+  ++E+  + F+ M    LV     Y +L+      G+   A  +
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 419

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P 
Sbjct: 420 FKQMVSDGVPPD 431



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 161/358 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G+    I+F TLIH +   ++      +   M++    PN  T   +++ LCK G   
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 204

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++L+++   +    V++  ++I  + +   +++ + L K M  K +  + + YS ++
Sbjct: 205 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                      A  +  +M+++  + N   +   I A+ + GK  EA  L  +M    + 
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 324

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N L+ G     R++++    E M+S+   P    +N +I+  C+    +    +
Sbjct: 325 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 384

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G   + +TY+ LI G   +G+     K++ +M    + P +  Y+ L+  LC 
Sbjct: 385 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 444

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE+A + F  M+   +   + IY +++    + G       L   +  +G+KP+ 
Sbjct: 445 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 502



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 152/335 (45%), Gaps = 2/335 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++ + +E +G   +++++++LI  +    R     ++   M+E    PN  T 
Sbjct: 236 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 295

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI A  K G+      + D +  +   P +    SL+      +R+++   + + M+ 
Sbjct: 296 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 355

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K+   D + Y+ ++    K + +E    ++ EM  RG   ++  YTT I      G  + 
Sbjct: 356 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 415

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + ++M + G+ P   T+++L++G     ++E++L   + M   ++      +  MI 
Sbjct: 416 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 475

Query: 242 RLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            +C+ G       +  +L+L KG  PN +TY+ +I G   +  +QE   L  +M+     
Sbjct: 476 GMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 534

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
           P    Y +LI +  + G    + +  + M+S   V
Sbjct: 535 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 569



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 134/285 (47%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P ++    L+  I + ++ +  + L ++M R  ++H    Y++++    +   +  A
Sbjct: 42  RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 101

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L +  +M+K G+  +    ++ +  YC   +I +A  L+ +M   G +P   TF  LI G
Sbjct: 102 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 161

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                +  E+++  ++M+ R   P+   +  ++  LC+ G+   A  +L          +
Sbjct: 162 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 221

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            + ++ +I    K   + + L L+ EME K I P +  Y+SLIS LC  G+  +A +   
Sbjct: 222 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 281

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M    + P +  + +L+   +++G   +A  L ++M+   + P 
Sbjct: 282 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 125/269 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + + ++++ + L   M++   +   + ++ ++ A  KM+  +  + + E+M +       
Sbjct: 23  LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 82

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y   I  +C   +I  A  L+ +M   G +P   T + L+ G    KRI ++++  +Q
Sbjct: 83  YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 142

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P    F  +I  L     A +A  ++   + +G  PN +TY  ++ G  K G+
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 202

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
               L L  +ME   I   +  + ++I SLC+   +++A   FK M++  + P V  Y S
Sbjct: 203 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+      G  + A  L  +M+ + + P+
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPN 291



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 85/208 (40%)

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           R FS+ S  Y   +       K+++A  L   M  +   P    FN L+   AK K+ + 
Sbjct: 6   RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 65

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
            +S  E+M   +++     +N +I   C       A  +L   +  G+ P+ +T S L+ 
Sbjct: 66  VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 125

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           GY     I + + L  +M      P    +T+LI  L    K  EA      M      P
Sbjct: 126 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 185

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +  Y  +V    ++G+   AL+L  +M
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKM 213


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 4/324 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDM 80
            ++S+ TLI+ + K  R D  + +++ M+      PN  T   L+  LCK  +L     +
Sbjct: 45  DVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAV 104

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           +     +  +P V+   +L+  + Q  R++E +    +M  +  +   ++++ I+    +
Sbjct: 105 IAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCR 164

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            R L  AL V+ EM+ R F  N   Y+  I   C+  +++EA  L+  M + G +P    
Sbjct: 165 ARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVA 224

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +  L+ G + A R++ +L    +M+S+  +P    +  +I +LC+ G    A+ +    +
Sbjct: 225 YTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELV 284

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
               SPN +TYS LIGGY +   + E  K+  EM  +   P +  Y ++I  L    + E
Sbjct: 285 ANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNE 341

Query: 321 EADKYFKIMKSHSLVPGVDIYESL 344
           EA   F+ M     VP    Y  L
Sbjct: 342 EAYGMFREMSECGFVPDARTYRGL 365



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 142/292 (48%), Gaps = 2/292 (0%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLD-RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           N+ T   ++  LC+ G++   ++  D  +      P V+  T+LI  + +  R++    L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 116 LKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
            ++M+       +   Y+ +V    K   L++A  V  E  KR F+ +   Y T + A  
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + G+++EA     +M   G  P   +FN +I G  +A+R+ ++L    +M+ R   P+  
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            ++ +I  LC+     +A  +L   + +G  P+ + Y+ L+ G++  G +   L L   M
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             +   P +  YT +I  LC+ G++++A + F+ + ++   P V  Y +L+G
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 300



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 3/230 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G+  +L+SFN +I  + ++ R      ++  M++   +PN  T   +I  LCK  Q
Sbjct: 143 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 202

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     +LDR+  + C P ++  T L+L      R++  + LL+RM+ +  I D + Y++
Sbjct: 203 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 262

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++ A  ++ E++    S N   Y+  IG YC   +++E   +M+EM    
Sbjct: 263 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---A 319

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +P   T+N +I G +   R EE+     +M     +P    +  + R L
Sbjct: 320 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 3/259 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R F+  ++++NTL+  + +  R D     +  M E    P   +   +I+ LC+  +L 
Sbjct: 110 KRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLA 169

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++ + +  +   P ++  + +I  + + ++++E   LL RM+ +    D +AY+ +V
Sbjct: 170 DALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLV 229

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L+SAL +   M+ +G   +   YT  I   C+ G++++A+ + +E+      
Sbjct: 230 LGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS 289

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++ LI G  +A R++E      +M  R   P+   +N MI  L      ++A GM
Sbjct: 290 PNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGM 346

Query: 256 LTLALDKGFSPNEITYSHL 274
                + GF P+  TY  L
Sbjct: 347 FREMSECGFVPDARTYRGL 365


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 174/348 (50%), Gaps = 2/348 (0%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           +T+I  + +  R+D    I+   +      N     +LI A  + G+L   V++ + +  
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMK- 183

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
             C P ++V  ++I    +       + + + ML + M  D I ++ ++ A  +    E 
Sbjct: 184 VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 243

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLI 205
              ++ EM +RG + +   Y T I  YC  G++     LM+ M +++G++P   T++ +I
Sbjct: 244 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 303

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G AK     E+++  ++M ++ + P    +N M+      GN  +A+ +     + GF+
Sbjct: 304 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 363

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + +TY+ L+  Y K+G+ +E + L  EM+ +  SP +  Y++LI + C+ G   +A   
Sbjct: 364 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMAL 423

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           F+ +K   L P V +Y +LV    + G+  +AL L EEM   G++P+ 
Sbjct: 424 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNV 471



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 158/369 (42%), Gaps = 42/369 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +  A  + R + ++G S   I+FNTLI    +++R +   RI+  M E     ++ T  T
Sbjct: 206 YPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNT 265

Query: 64  LISALCKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           LI+  C+GGQ+     +++ +       P VI  +++I    +     E + L + M  +
Sbjct: 266 LIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ 325

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N+  D I Y+ +V    ++ N + A  +   M + GF+ +   Y   + +Y + GK  EA
Sbjct: 326 NVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREA 385

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++EM+  G  P   T++ LI+   K     ++++  + +    L P    ++ ++  
Sbjct: 386 MSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDG 445

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA----------------------- 279
            C+ G+  +A  +L    D G  PN ITY+ L+  Y                        
Sbjct: 446 CCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTM 505

Query: 280 ------------------KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                             K+  +    +++ EM    + P +  ++S++++   C  +E+
Sbjct: 506 LLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVED 565

Query: 322 ADKYFKIMK 330
           A    + M+
Sbjct: 566 ASSLLEAMR 574



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/393 (19%), Positives = 147/393 (37%), Gaps = 71/393 (18%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  + R +E+ GF+  ++++N L+    K  +      + + M +    PN  T   
Sbjct: 347 FDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSA 406

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A CK G  +  + +   +      P V++ ++L+    +    +E + LL+ M    
Sbjct: 407 LIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 466

Query: 124 MIHDTIAYSLIVYA-----------------------------------------KVKMR 142
           +  + I Y+ ++ A                                         K K  
Sbjct: 467 IRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQA 526

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            + +A  V+ EM K G   N   +++ + A      +E+A+ L++ M     + Y  T  
Sbjct: 527 LVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRVFDGRVYGVTHG 586

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           LL+    +  R  E+L    ++ +     + + +N +   L     AK A        DK
Sbjct: 587 LLMGFRIRVWRDAETL--FNELTTLGHNTAVAFYNALTDVLWHFEQAKAAKDRHV--WDK 642

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLY------YEMEYKSISPTLPAYTSLISSLCQC 316
            +  +E  +  L   +   G  Q +L L+      +  + +S+   LP Y S+++     
Sbjct: 643 AWWHSEQQF-FLDLHFMSVGSAQAMLHLWLLYIRKFLCQRRSV---LPKYMSILTGW--- 695

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           GK             HS VPG    +  V  HL
Sbjct: 696 GK-------------HSKVPGESAVKRAVEAHL 715


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 169/361 (46%), Gaps = 38/361 (10%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQT 76
           G   S+ S NTL++V+ ++ R DLV  ++++  E+    PN  T   L+ ALCK   +++
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +LD I                                       ++ + + Y+ I+ 
Sbjct: 210 AYKVLDEIPSM-----------------------------------GLVPNLVTYTTILG 234

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
             V   ++ESA  V EEML RG+  ++  YT  +  YC+ G+  EA  +M +ME   ++P
Sbjct: 235 GYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEP 294

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
            + T+ ++I    K K+  E+ +  ++M+ R  +P  S   ++I  LCE     +A G+ 
Sbjct: 295 NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L     P+    S LI    KEG + E  KL+ E E  SI P+L  Y +LI+ +C+ 
Sbjct: 355 RKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEK 413

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
           G+L EA + +  M      P    Y  L+    + GN  + + + EEM+  G  P+ T++
Sbjct: 414 GELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473

Query: 376 L 376
           L
Sbjct: 474 L 474



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 4/255 (1%)

Query: 12  RYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           R LE+   RG+     ++  L+    K  R      +   M +N   PNE T   +I AL
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK  +     +M D +  +   P   +   +I  + ++ +++E   L ++ML+ N + D 
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
              S +++   K   +  A  +++E  ++G   +   Y T I   CE G++ EA  L  +
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M     KP   T+N+LIEG +K   ++E +   E+M+     P+ + F  +   L + G 
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485

Query: 249 AKQANGMLTLALDKG 263
            + A  ++++A+  G
Sbjct: 486 EEDAMKIVSMAVMNG 500



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/329 (19%), Positives = 130/329 (39%), Gaps = 8/329 (2%)

Query: 54  RYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           R+P     R L SA      LQ Y      I   +  P  +    L+  I Q++ I+  +
Sbjct: 10  RFPPFVASRRLFSASASAASLQQYCTEKPPI---KPWPQRLFPKRLVSMITQQQNIDLAL 66

Query: 114 --VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR--GFSANSFVYTTF 169
              L          H+   Y  I++   + R  +    +  ++            ++   
Sbjct: 67  QIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDL 126

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS-YCEQMMSRK 228
           +  Y   G+ E +  +   + + G+K    + N L+    + +R +   + +     S  
Sbjct: 127 LRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFG 186

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           + P+    N +++ LC+  + + A  +L      G  PN +TY+ ++GGY   G+++   
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           ++  EM  +   P    YT L+   C+ G+  EA      M+ + + P    Y  ++   
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
            ++    +A ++ +EM+     P +S  C
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCC 335


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 176/370 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R + Q+    ++I++NT+I  + K  + +    I+  M+     PN +T  ++I 
Sbjct: 198 AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIH 257

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  + +    +++ +   +  P V++ T+L+  + +E  +     ++  M+++ +  
Sbjct: 258 GLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP 317

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++        ++ A  V++ M+++G + N   Y+T I  YC+  +I++A  L 
Sbjct: 318 DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLF 377

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    L P   T+N LI G     R+ ++++   +M++   +P    +  ++  LC+ 
Sbjct: 378 EEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKT 437

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +  QA  ML        +P+  +Y+ +I G  + GE++    L+  +  K + P +  Y
Sbjct: 438 RHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTY 497

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +I+ LC  G L EA K F+ M +    P    Y  +    L       A+ L +EM+ 
Sbjct: 498 TIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLG 557

Query: 367 EGLKPSTSYL 376
            G     S +
Sbjct: 558 RGFSADASTI 567



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 168/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +     + + ++  G    + +   +I+     +R D  + +   + +    P+ AT
Sbjct: 87  MKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTAT 146

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC  G++   + + D++ G+   P  +   +LI  + +       + LL+ M+
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMV 206

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +KN   + I Y+ I+    K R +  AL ++ EM+ +G S N   Y + I   C++ + +
Sbjct: 207 QKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWK 266

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
               LM EM ++ + P    F  L++   K   +  +    + M+ R + P    +  ++
Sbjct: 267 HVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALM 326

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C      +A+ +    + KG +PN I+YS LI GY K   I + + L+ EM  + + 
Sbjct: 327 DGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELV 386

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI  LC  G+L +A   F  M +   +P +  Y  L+    +  +  +A+ +
Sbjct: 387 PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446

Query: 361 CEEMVSEGLKPS 372
            + +    L P 
Sbjct: 447 LKAIEGSNLAPD 458



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 169/355 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  + +++ TLIH + K   +    R+ + M++    PN  T  T+I  L K  Q+   
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++   +  K  SP V    S+I  + +    +    L+  M+   ++ + + ++ +V A
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDA 293

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +  A  V + M++RG   +   YT  +  +C   +++EA+ +   M   G  P 
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPN 353

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             +++ LI G  K +RI++++   E+M  R+L+P+   +N +I  LC  G  + A  +  
Sbjct: 354 VISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFH 413

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +  G  P+ +TY  L+    K   + + + +   +E  +++P + +Y  +I  +C+ G
Sbjct: 414 EMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVG 473

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +LE A   F  + S  L P V  Y  ++     +G  A+A  L  EM ++G  P 
Sbjct: 474 ELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPD 528



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 125/264 (47%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I+E +    RML        + ++ I+ +   M++  + L + ++M   G  ++ +    
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I ++C   +++    ++ ++   G +P   TF  LI G     +I E+L   ++M+   
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   +  +I  LC+ GN++ A  +L   + K   PN ITY+ +I    K+ ++ E L
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            ++ EM  K ISP +  Y S+I  LC+  + +        M    ++P V I+ +LV   
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G    A  + + M+  G++P 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPD 318



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 149/346 (43%), Gaps = 35/346 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +  +G S ++ ++N++IH + K      V  +   M+++   PN     TL+ 
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G +    D++D +  +   P V+  T+L+        ++E   +   M+RK    
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I+YS ++    K++ ++ A+ ++EEM +R    N   Y T I   C  G++ +A  L 
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM  +G  P   T+ +L++   K + ++++++  + +    L P   ++N +I  +C  
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRV 472

Query: 247 GNAKQANGMLTLALDKGF-----------------------------------SPNEITY 271
           G  + A  + +    KG                                    SP++ TY
Sbjct: 473 GELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTY 532

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + +  G+ +  E    ++L  EM  +  S      T ++  L   G
Sbjct: 533 NLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 127/292 (43%)

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
            +R+   +  P V+    ++  I   +     + L K+M    +  D    ++++ +   
Sbjct: 62  FNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCH 121

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           +  ++    V  ++ K G   ++  +TT I   C  GKI EA  L  +M   G +P   T
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVT 181

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +  LI G  K      ++     M+ +   P+   +N +I  L +     +A  + +  +
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMI 241

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG SPN  TY+ +I G  K  E + V  L  EM    I P +  +T+L+ +LC+ G + 
Sbjct: 242 AKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVT 301

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            A     +M    + P V  Y +L+  H  +    +A  + + MV +G  P+
Sbjct: 302 IAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPN 353



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 81/200 (40%)

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
            +  I+EA      M +    P    F  ++   A  K     LS  +QM S  +     
Sbjct: 51  NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
               +I   C          +L      G  P+  T++ LI G   EG+I E L L+ +M
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             +   P    Y +LI  LC+ G    A +  + M   +  P V  Y +++    +    
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230

Query: 355 AKALHLCEEMVSEGLKPSTS 374
            +AL++  EM+++G+ P+ S
Sbjct: 231 NEALNIFSEMIAKGISPNVS 250


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 158/326 (48%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG+   + ++ T+I+ + K         +++ M E    P+  T  T+I +LCK  ++  
Sbjct: 4   RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 63

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +D+   +  K  SP +    SLI  +    R  E   +L  M+  N++ + + +SL++ 
Sbjct: 64  ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 123

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K  N+  A  V + M + G   N   Y++ +  Y    ++ EA  L   M   G KP
Sbjct: 124 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N+LI G  KAKRI E+     +M+ + L P   ++N +I  LC+ G  ++A+ + 
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L  G  P+  TYS L+ G+ K+G + +  +L+  M+   + P +  Y  LI ++C+ 
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYE 342
             L+EA K F  +    L P +  ++
Sbjct: 304 RNLKEARKLFSELFVQGLQPNMKHWK 329



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 139/317 (43%), Gaps = 35/317 (11%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T  T+I+ LCK G+      +  ++    C P                        
Sbjct: 8   PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQP------------------------ 43

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
                      D + YS I+ +  K R +  AL ++  M  +G S N F Y + I   C 
Sbjct: 44  -----------DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 92

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           + +  EA+ ++ EM +  + P   TF+LLI    K   + E+    + M    + P+   
Sbjct: 93  FSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 152

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++ ++          +A  +  + + KG  P+  +Y+ LI GY K   I E  +L+ EM 
Sbjct: 153 YSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 212

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
           ++ ++P + +Y +LI  LCQ G+L EA   FK M ++  +P +  Y  L+    ++G  A
Sbjct: 213 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 272

Query: 356 KALHLCEEMVSEGLKPS 372
           KA  L   M S  LKP+
Sbjct: 273 KAFRLFRAMQSTYLKPN 289


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 166/348 (47%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L + N ++  + K+     VW ++  ML     P+  T  TLI+A    G +    ++ 
Sbjct: 137 ALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVW 196

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D++  +R  P V+  T++I  + +E+ I +   L   M    M  +   Y+ ++ +  K 
Sbjct: 197 DQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKR 256

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N++ ALV Y ++LK G   N  ++TT I   C+  +I EA  +  +M    + P    +
Sbjct: 257 DNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVY 316

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G  ++   +E+L++ ++++ + L P     + ++R LC+ G  + A   L +   
Sbjct: 317 NSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQ 376

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G + N   Y+ LI  Y K G + E L     M    + P +  Y+SLI    + G++E 
Sbjct: 377 SGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEI 436

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           A   +  M +  + P V  Y +L+  H + G+   A  L +EM  +G+
Sbjct: 437 AMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGI 484



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 161/365 (44%), Gaps = 6/365 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   +L ++N L+    K D        Y  +L+    PN+    TLI  LC+  +
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANR 293

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    ++   +     +P V V  SLI    +    +E +   + ++RK +  D    S+
Sbjct: 294 ITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSI 353

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V        ++ A    E M + G + N+  Y   I  YC+ G ++EA      M   G
Sbjct: 354 VVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVG 413

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   T++ LI+G +K   +E +++   +M+++ + P+   +  +I    + G+   A 
Sbjct: 414 VEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAF 473

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA------YT 307
            +     +KG   N IT S L+ G  +E  +Q+ ++   E   +  S   P+      Y 
Sbjct: 474 WLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYM 533

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +LI  L   G+  EA  +F  M+   +VP    Y  ++      G    A+ L  +MV  
Sbjct: 534 TLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKV 593

Query: 368 GLKPS 372
           G+KP+
Sbjct: 594 GVKPT 598



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 140/318 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P       ++  L K   L    ++ D + G+   P V+   +LI     +  + +   +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             +M+ + +  + + Y+ ++ A  +   +  A  ++ EM + G   N + Y   + ++ +
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              I+ A     ++   GL P D  F  LI+G  +A RI E+ +    M   ++ P+   
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I      G A++A       + KG  P+E T S ++ G    G++Q   +    M+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              I+    AY  LI   C+ G L+EA      M    + P V  Y SL+  H + G   
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435

Query: 356 KALHLCEEMVSEGLKPST 373
            A+ +  EMV++G++P+ 
Sbjct: 436 IAMAIYTEMVAKGVEPNV 453



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
              +L+   ++    +E+LS   ++     LP+C   N ++  L +     +   +    
Sbjct: 108 ALGVLVIALSQMALPDEALSVFGRLRELPALPAC---NAILDGLVKAHMLARVWELFDEM 164

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L +G  P+ +TY+ LI     +G++ +  +++ +M  + I P +  YT++I +LC+   +
Sbjct: 165 LGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCI 224

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +A+  F  MK   + P +  Y +L+  H ++ N   AL    +++  GL P+
Sbjct: 225 GDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPN 277



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 78/196 (39%), Gaps = 6/196 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A   C  + + G   +++++++LI   +K+   ++   IY  M+     PN  T   LI 
Sbjct: 402 ALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIH 461

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL------KRML 120
              K G +     +   +  K      I  + L+  + +E R+++ +  +      K+  
Sbjct: 462 GHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSE 521

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +   I +++ Y  ++Y          A   +  M   G   + F YT  I   C  G + 
Sbjct: 522 KNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 581

Query: 181 EANCLMQEMENAGLKP 196
            A  L  +M   G+KP
Sbjct: 582 NAMMLYADMVKVGVKP 597



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 73/160 (45%), Gaps = 6/160 (3%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+A  +   +  +G   +++++  LIH   K+   D  + + + M E   Y N  T+  L
Sbjct: 435 EIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVL 494

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCS---PMV---IVNTSLILRIIQEERIEEGMVLLKR 118
           +  LC+  ++Q  V  +    G++ S   P +   +   +LI  +  + +  E       
Sbjct: 495 VDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSC 554

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           M    M+ D   Y+L++     +  + +A+++Y +M+K G
Sbjct: 555 MRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVG 594


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 178/380 (46%), Gaps = 4/380 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEA 59
           M   E  F     + + G+ +  I+ N L+  +    R  + +  + Q M E    P+  
Sbjct: 103 MGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTV 162

Query: 60  TIRTLISALCKGGQLQTYVDMLDRI---HGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           +   L+  LC   + +  +++L  +   HG+RC P V+  + +I     E ++++   L 
Sbjct: 163 SYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLF 222

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M+ + +  D + Y+ ++    K +  + A  V+++M+  GF  N++ Y   I  Y   
Sbjct: 223 LEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSI 282

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           GK +E   +++EM   GLKP   T+  L+    K  R  E+  + + M+ + + P  S +
Sbjct: 283 GKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTY 342

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             +I      G   + +  L L ++ G SP+   ++     YAK G I + + ++ +M  
Sbjct: 343 GILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 402

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             +SP +  Y +LI +LC+ G++++A+  F  M +  + P + ++ SLV          +
Sbjct: 403 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 462

Query: 357 ALHLCEEMVSEGLKPSTSYL 376
           A  L  EM+ +G+ P+  + 
Sbjct: 463 AEELVYEMLDQGICPNAVFF 482



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 159/358 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG    ++++ T+I  + K+   D    ++Q M++N   PN  T   LI      G+ +
Sbjct: 227 DRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWK 286

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V ML+ +  +   P      SL+  + +  R  E       M+RK +      Y +++
Sbjct: 287 EVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILI 346

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +       L       + M++ G S +  ++  F  AY + G I++A  +  +M   GL 
Sbjct: 347 HGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 406

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  LI+   K  R++++     QM++  + P+   FN ++  LC     ++A  +
Sbjct: 407 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 466

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G  PN + ++ LI      G + E  +L   ME+  + P   +YT LIS  C 
Sbjct: 467 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 526

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G+ +EA+K F  M S  L P    Y +L+  +        A  L  EM+ +G+ P  
Sbjct: 527 TGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 584



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 12/375 (3%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY----PN 57
           +LF+ A  V + +   GF  +  ++N LIH      +    W+    MLE +      P+
Sbjct: 248 QLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK----WKEVVQMLEEMSARGLKPD 303

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             T  +L++ LCK G+ +      D +  K   P V     LI     +  + E    L 
Sbjct: 304 CYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLD 363

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M+   +  D   +++   A  K   ++ A+ ++ +M + G S N   Y   I A C+ G
Sbjct: 364 LMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLG 423

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++++A     +M N G+ P    FN L+ G     + E +     +M+ + + P+   FN
Sbjct: 424 RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 483

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I  LC  G   +   ++ L    G  P+  +Y+ LI GY   G   E  K++  M   
Sbjct: 484 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSI 543

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKA 355
            +SPT   Y +L+   C   ++++A   F+ M    + PGV  Y +++      ++ ++A
Sbjct: 544 GLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 603

Query: 356 KALHLCEEMVSEGLK 370
           K L+L   M++ G K
Sbjct: 604 KELYL--NMINSGTK 616



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 155/355 (43%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + A D+   + Q G S +++++  LI  + K  R D     +  M+     PN     
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +L+  LC   + +   +++  +  +   P  +   +LI  +    R+ EG  L+  M   
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 508

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D  +Y+ ++         + A  V++ M+  G S     Y T +  YC   +I++A
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            CL +EM   G+ P   T+N ++ G  + KR  E+      M++         +N ++  
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A  M      KG   N IT++ +IG   K G  ++ + L+  +    + P 
Sbjct: 629 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 688

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           +  Y  +  +L + G LEE D  F  M+ +   P   +  +LV   L +G+ ++A
Sbjct: 689 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 158/358 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G    + ++  LIH          +      M+EN   P+        SA  K G + 
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 391

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +D+ +++     SP V+   +LI  + +  R+++  V   +M+ + +  + + ++ +V
Sbjct: 392 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 451

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           Y    +   E A  +  EML +G   N+  + T I   C  G++ E   L+  ME+ G++
Sbjct: 452 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 511

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++  LI G     R +E+    + M+S  L P+   +N ++   C       A  +
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L KG +P  +TY+ ++ G  +     E  +LY  M        +  Y  +++ LC+
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              ++EA K F+ + S  L   +  +  ++G  L+ G K  A+ L   + + GL P+ 
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNV 689



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 159/361 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G S     FN       K    D    I+  M ++   PN      LI ALCK G++ 
Sbjct: 367 ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVD 426

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                 +++  +  +P ++V  SL+  +   ++ E    L+  ML + +  + + ++ ++
Sbjct: 427 DAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 486

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +  +     + + M   G   ++F YT  I  YC  G+ +EA  +   M + GL 
Sbjct: 487 CNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLS 546

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P + T+N L+ G   A RI+++     +M+ + + P    +N ++  L +     +A  +
Sbjct: 547 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 606

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               ++ G   +  TY+ ++ G  K   + E  K++  +  K +   +  +T +I +L +
Sbjct: 607 YLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLK 666

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            G+ E+A   F  + ++ LVP V  Y  +    +E+G+  +   L   M   G  P++  
Sbjct: 667 GGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 726

Query: 376 L 376
           L
Sbjct: 727 L 727



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 110/268 (41%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G      S+  LI     + R D   +++  M+     P E T  TL+   C   +
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +   +  K  +P V+   +++  + Q +R  E   L   M+      D   Y++
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    K   ++ A  +++ +  +G   N   +T  IGA  + G+ E+A  L   +   G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+ L+ E   +   +EE  S    M      P+    N ++RRL   G+  +A 
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 744

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKE 281
             L+   ++ FS    T S L+  +  +
Sbjct: 745 AYLSKLDERNFSVEASTTSLLMSIFTSD 772



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/298 (20%), Positives = 125/298 (41%), Gaps = 1/298 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G   + + FNTLI  +    R     R+   M      P+  +   LIS  C  G+  
Sbjct: 472 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTD 531

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + D +     SP  +   +L+       RI++   L + MLRK +    + Y+ I+
Sbjct: 532 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +   + +    A  +Y  M+  G   + + Y   +   C+   ++EA  + Q + + GL+
Sbjct: 592 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 651

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               TF ++I    K  R E+++     + +  L+P+   +  +   L E G+ ++ + +
Sbjct: 652 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSL 711

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     G +PN    + L+      G+I        +++ ++ S    + TSL+ S+
Sbjct: 712 FSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS-VEASTTSLLMSI 768


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 164/357 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG    +++++++I  + K+   D    +   M++N   P+  T  +++   C  GQ +
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 288

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++      P V+  +SL+  + +  R  E   +   M ++ +  D   Y  ++
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   +  V+   I AY +  K+++A  +  +M   GL 
Sbjct: 349 QGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLN 408

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  +I+   K+  +++++ Y EQM+   L P+   +  +I  LC C    +A  +
Sbjct: 409 PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL 468

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   N I ++ +I  + KEG + E  KL+  M    + P +  Y +LI   C 
Sbjct: 469 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA K    M S  + P +  Y +L+  +        AL L +EMVS G+ P+
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 162/356 (45%), Gaps = 2/356 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G     +++N+++H    S +        + M  +   PN  T  +L++
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+      + D +  +   P +    +L+     +  + E   LL  M+R  +  
Sbjct: 315 YLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +++++ A  K   ++ A++V+ +M + G + N   Y T I   C+ G +++A    
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + GL P    +  LI G     + +++     +M+ R +  +   FN +I   C+ 
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   ++  +  L +  G  P+ ITY+ LI G    G++ E  KL   M    + P +  Y
Sbjct: 495 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKAKALHL 360
            +LI+  C+  ++++A   FK M S  + P +  Y  ++    H  +   AK L++
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 610



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 169/366 (46%), Gaps = 8/366 (2%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM-LDR 83
           ++  LI    ++ R DL +    ++++     +  T   L+  LC   +    +D+ L R
Sbjct: 94  TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---NMIHDTIAYSLIVYAKVK 140
           +    C P V    +L+  +  E R +E + LL  M          D ++Y+ ++    K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             + + A   Y EML RG   +   Y++ I A C+   +++A  ++  M   G+ P   T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N ++ G   + + +E++   ++M S  + P+   ++ ++  LC+ G + +A  +     
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G  P+  TY  L+ GYA +G + E+  L   M    I P    +  LI +  +  K++
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS----TSYL 376
           +A   F  M+ H L P V  Y +++ +  + G+   A+   E+M+ EGL P+    TS +
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 377 CSASTC 382
               TC
Sbjct: 454 HGLCTC 459



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 152/326 (46%), Gaps = 1/326 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G   +++++++L++ + K+ R+    +I+  M +    P+ AT RTL+ 
Sbjct: 290 AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 349

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V   LI    ++E++++ M++  +M +  +  
Sbjct: 350 GYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP 409

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y  ++    K  +++ A++ +E+M+  G + N  VYT+ I   C   K ++A  L+
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I+   K  R+ ES    + M+   + P    +N +I   C  
Sbjct: 470 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 529

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L   +  G  P+ +TY  LI GY +   + + L L+ EM    +SP +  Y
Sbjct: 530 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 589

Query: 307 TSLISSLCQCGKLEEADK-YFKIMKS 331
             ++  L    +   A + Y  I KS
Sbjct: 590 NIILQGLFHTRRTAAAKELYVSITKS 615



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 156/328 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI    K ++ D    ++  M ++   PN     T+I  LCK G +   +   +++ 
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  +P +IV TSLI  +   ++ ++   L+  ML + +  +TI ++ I+ +  K   + 
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   +   Y T I   C  GK++EA  L+  M + G+KP   T+  LI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  +  R++++L+  ++M+S  + P+   +N +++ L        A  +       G  
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L +CG+++EA   
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           F    ++ LVP V  Y  +    +E+G+
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGS 706



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 168/371 (45%), Gaps = 13/371 (3%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPNEATIRTLI 65
           V R + + G    + S+N L+  +   +R+     +  HM+ + R     P+  +  T++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL-HMMADDRGGGSPPDVVSYNTVL 208

Query: 66  SALCKGGQ----LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           +   K G       TY +MLDR       P V+  +S+I  + + + +++ M +L  M++
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDR----GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D + Y+ I++        + A+   ++M   G   N   Y++ +   C+ G+  E
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   M   GL+P   T+  L++G A    + E  +  + M+   + P    FN +I 
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              +     QA  + +     G +PN + Y  +I    K G + + +  + +M  + ++P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  YTSLI  LC C K ++A++    M    +      + S++  H ++G   ++  L 
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 362 EEMVSEGLKPS 372
           + MV  G+KP 
Sbjct: 505 DLMVRIGVKPD 515



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 141/331 (42%), Gaps = 10/331 (3%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y EQ    G + ++I + +LIH +   D+ D    +   ML+     N     ++I
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P +I   +LI       +++E   LL  M+  
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVK---PDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y  ++    ++  ++ AL +++EM+  G S N   Y   +       +   A
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 605

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 606 KELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 665

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L +CG   +A  +       G  P+  TYS +     ++G ++E+  L+  ME    S  
Sbjct: 666 LLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSAD 725

Query: 303 LPAYTSLISSLCQCGKLEEADKY-FKIMKSH 332
                S++  L Q G +  A  Y F I + H
Sbjct: 726 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 756



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 4/149 (2%)

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           K+ P+   +  +I   C  G        L   + KGF  + IT++ L+ G   +    + 
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 288 LKLYY-EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM---KSHSLVPGVDIYES 343
           + +    M      P + +Y +L+  LC   + +EA +   +M   +     P V  Y +
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++    ++G+  KA     EM+  G+ P 
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPD 235


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 174/348 (50%), Gaps = 2/348 (0%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           +T+I  + +  R+D    I+   +      N     +LI A  + G+L   V++ + +  
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMK- 182

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
             C P ++V  ++I    +       + + + ML + M  D I ++ ++ A  +    E 
Sbjct: 183 VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLI 205
              ++ EM +RG + +   Y T I  YC  G++     LM+ M +++G++P   T++ +I
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 302

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G AK     E+++  ++M ++ + P    +N M+      GN  +A+ +     + GF+
Sbjct: 303 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 362

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + +TY+ L+  Y K+G+ +E + L  EM+ +  SP +  Y++LI + C+ G   +A   
Sbjct: 363 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMAL 422

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           F+ +K   L P V +Y +LV    + G+  +AL L EEM   G++P+ 
Sbjct: 423 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNV 470



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 158/369 (42%), Gaps = 42/369 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +  A  + R + ++G S   I+FNTLI    +++R +   RI+  M E     ++ T  T
Sbjct: 205 YPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNT 264

Query: 64  LISALCKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           LI+  C+GGQ+     +++ +       P VI  +++I    +     E + L + M  +
Sbjct: 265 LIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ 324

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N+  D I Y+ +V    ++ N + A  +   M + GF+ +   Y   + +Y + GK  EA
Sbjct: 325 NVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREA 384

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L++EM+  G  P   T++ LI+   K     ++++  + +    L P    ++ ++  
Sbjct: 385 MSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDG 444

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA----------------------- 279
            C+ G+  +A  +L    D G  PN ITY+ L+  Y                        
Sbjct: 445 CCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTM 504

Query: 280 ------------------KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                             K+  +    +++ EM    + P +  ++S++++   C  +E+
Sbjct: 505 LLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVED 564

Query: 322 ADKYFKIMK 330
           A    + M+
Sbjct: 565 ASNLLEAMR 573



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/256 (19%), Positives = 101/256 (39%), Gaps = 41/256 (16%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  + R +E+ GF+  ++++N L+    K  +      + + M +    PN  T   
Sbjct: 346 FDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSA 405

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A CK G  +  + +   +      P V++ ++L+    +    +E + LL+ M    
Sbjct: 406 LIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 465

Query: 124 MIHDTIAYSLIVYA---------------------------KVKMRNLESALV------- 149
           +  + I Y+ ++ A                           K  M++ + +LV       
Sbjct: 466 IRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQA 525

Query: 150 -------VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
                  V+ EM K G   N   +++ + A      +E+A+ L++ M     + Y  T  
Sbjct: 526 LVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRVFDGRVYGVTHG 585

Query: 203 LLIEGCAKAKRIEESL 218
           LL+    +  R  E+L
Sbjct: 586 LLMGFRIRVWRDAETL 601


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 1/349 (0%)

Query: 25   SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
            +FN L+  V K      V+ +Y+ + +    P+  T+  LI   C    +     +    
Sbjct: 948  TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGF 1007

Query: 85   HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +   P  +  T+L+  +  E  I + + L   M +K ++ D   Y +++    K R  
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067

Query: 145  ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
              A+ ++E+M K     + F Y   I A C+ G   EA  +  EM  AG+ P    ++ L
Sbjct: 1068 GLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126

Query: 205  IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
            ++G  +  R++E+L + ++M  R +      +N +I  L   G  K+    L L +D+GF
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186

Query: 265  SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            SP+  T++ LI G  KEG++ E  ++   M +K   P +  Y +L++ LC  G+LE+A K
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246

Query: 325  YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             F+ +    +   V  Y  L+  + +     +A    EEM  +GLKPST
Sbjct: 1247 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPST 1295



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 1/316 (0%)

Query: 16   QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +RGF    ++  TL+  V   +      +++  M +     +  T   LI+ LCK  +  
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068

Query: 76   TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              + + +++ G  C   V     +I  + ++    E + +   M+   ++ D + YS ++
Sbjct: 1069 LAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127

Query: 136  YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +   L+ AL  ++EM  RG SA+ + Y + I      G  +E    +  M + G  
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187

Query: 196  PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
            P   TF +LI+G  K  ++ E+    E M  +   P    +N ++  LC  G  + A  +
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247

Query: 256  LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 D+G   N  +Y+ LI GY K+ +I E  + + EM  K + P+   Y +LI +LCQ
Sbjct: 1248 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQ 1307

Query: 316  CGKLEEADKYFKIMKS 331
             G++  A K F  M++
Sbjct: 1308 SGRVRTAQKLFVEMQT 1323



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 159/330 (48%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A +  + +E RG S  + ++N+LIH ++++     V      M++    P+  T   LI 
Sbjct: 1139 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 1198

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             LCK G++     +L+ +  K   P ++   +L+  +    ++E+   L + +  + +  
Sbjct: 1199 GLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 1258

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            +  +Y++++    K + ++ A   +EEM  +G   ++  Y T IGA C+ G++  A  L 
Sbjct: 1259 NVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 1318

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             EM+  G      T+ +L++G  K   +EE++   + +   +  P+   F+ ++  +C  
Sbjct: 1319 VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRA 1378

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            G  ++A          G  P+ I Y+ LI G   +G + E +KL ++ME K   P    +
Sbjct: 1379 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 1438

Query: 307  TSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              +I +L +  ++ EA +  + M++ +  P
Sbjct: 1439 NVIIQNLLKENEIHEAIQLLEEMRNRNFSP 1468



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 166/372 (44%), Gaps = 3/372 (0%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            +   F + R +   G    L + N LIH           + ++   L+    P+  T+ T
Sbjct: 962  YSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTT 1021

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            L+  +     +   V + D +  K           LI  + +  +    + L ++M + N
Sbjct: 1022 LVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGN 1080

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
               D   Y +I+ A  K      AL ++ EM+  G   +  VY++ +   C +G+++EA 
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
               +EME  G+     T+N LI G ++A   +E   +   M+ R   P    F  +I  L
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            C+ G   +A  +L L   KG  P+ +TY+ L+ G    G++++  KL+  +  + I   +
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260

Query: 304  PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +Y  LI+  C+  K++EA ++F+ M+   L P    Y +L+G   + G    A  L  E
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320

Query: 364  MVSEG--LKPST 373
            M + G  LK ST
Sbjct: 1321 MQTCGQFLKLST 1332



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 35/272 (12%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
             E A  +   L  RG  L++ S+N LI+   K  + D  +R ++ M      P+  T  T
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            LI ALC+ G+++T   +   +  + C   + ++T                          
Sbjct: 1301 LIGALCQSGRVRTAQKLF--VEMQTCGQFLKLST-------------------------- 1332

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                   Y +++    K  +LE A+ +++ + K     N  V++  +   C  GK+EEA 
Sbjct: 1333 -------YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 1385

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
                E+   GL+P    +N+LI G      + E++    QM  +  LP    FN +I+ L
Sbjct: 1386 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
             +     +A  +L    ++ FSP+E   S L+
Sbjct: 1446 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 72/158 (45%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
             E A D+ + +++     ++  F+ L+  + ++ + +  W+ +  + +N   P+      
Sbjct: 1346 LEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 1405

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            LI+ LC  G L   V +L ++  K C P  I    +I  +++E  I E + LL+ M  +N
Sbjct: 1406 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 1465

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
               D    S+++          +ALV     L++G  +
Sbjct: 1466 FSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGVGS 1503


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 169/352 (48%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ FN L+  + K  + D+V  + + M          T   LI+  C+  Q+   + +L
Sbjct: 84  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++  +SL+      +RI + + L+ +M+      DTI ++ +++     
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + + M++RG   N   Y   +   C+ G  + A  L+ +ME A ++     F
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+   K + ++++L+  ++M ++ + P+   ++ +I  LC  G    A+ +L+  ++
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K  +PN +T++ LI  + KEG+  E  KLY +M  +SI P +  Y SL++  C   +L++
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A + F+ M S    P V  Y +L+    +         L  EM   GL   T
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 162/353 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+++ ++L++      R      +   M+E    P+  T  TLI  L    +    
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V ++DR+  + C P ++    ++  + +    +  + LL +M    +  D + ++ I+ +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R+++ AL +++EM  +G   N   Y++ I   C YG+  +A+ L+ +M    + P 
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TFN LI+   K  +  E+    + M+ R + P    +N ++   C      +A  M  
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + K   P+ +TY+ LI G+ K   +++  +L+ EM ++ +      YT+LI  L   G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             + A K FK M S  + P +  Y  L+      G   KAL + + M    +K
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 168/386 (43%), Gaps = 35/386 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG   +L+++  +++ + K    DL   +   M       +     T+I +LCK   + 
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  K   P V+  +SLI  +    R  +   LL  M+ K +  + + ++ ++
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A VK      A  +Y++M+KR    + F Y + +  +C + ++++A  + + M +    
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI+G  K+KR+E+      +M  R L+     +  +I+ L   G+   A  +
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
               +  G  P+ +TYS L+ G    G++++ L+++  M+                    
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517

Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
                           K + P +  Y ++IS LC    L+EA    K MK    +P    
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVS 366
           Y +L+  HL  G+KA +  L  EM S
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRS 603



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 172/372 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ F+V   +   +++      L ++N LI+   +  +  L   +   M++    P+  T
Sbjct: 98  MKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  I  T+LI  +    +  E + L+ RM+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    + + Y ++V    K  + + AL +  +M      A+  ++ T I + C+Y  ++
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L +EME  G++P   T++ LI       R  ++      M+ +K+ P+   FN +I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G   +A  +    + +   P+  TY+ L+ G+     + +  +++  M  K   
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y +LI   C+  ++E+  + F+ M    LV     Y +L+      G+   A  +
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457

Query: 361 CEEMVSEGLKPS 372
            ++MVS+G+ P 
Sbjct: 458 FKQMVSDGVPPD 469



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/358 (21%), Positives = 161/358 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G+    I+F TLIH +   ++      +   M++    PN  T   +++ LCK G   
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++L+++   +    V++  ++I  + +   +++ + L K M  K +  + + YS ++
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                      A  +  +M+++  + N   +   I A+ + GK  EA  L  +M    + 
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N L+ G     R++++    E M+S+   P    +N +I+  C+    +    +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G   + +TY+ LI G   +G+     K++ +M    + P +  Y+ L+  LC 
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE+A + F  M+   +   + IY +++    + G       L   +  +G+KP+ 
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 148/334 (44%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++ + +E +G   +++++++LI  +    R     ++   M+E    PN  T 
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI A  K G+      + D +  +   P +    SL+      +R+++   + + M+ 
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K+   D + Y+ ++    K + +E    ++ EM  RG   ++  YTT I      G  + 
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + ++M + G+ P   T+++L++G     ++E++L   + M   ++      +  MI 
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +C+ G       +      KG  PN +TY+ +I G   +  +QE   L  +M+     P
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
               Y +LI +  + G    + +  + M+S   V
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 607



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 134/285 (47%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P ++    L+  I + ++ +  + L ++M R  ++H    Y++++    +   +  A
Sbjct: 80  RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 139

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L +  +M+K G+  +    ++ +  YC   +I +A  L+ +M   G +P   TF  LI G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                +  E+++  ++M+ R   P+   +  ++  LC+ G+   A  +L          +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            + ++ +I    K   + + L L+ EME K I P +  Y+SLIS LC  G+  +A +   
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M    + P +  + +L+   +++G   +A  L ++M+   + P 
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 125/269 (46%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + + ++++ + L   M++   +   + ++ ++ A  KM+  +  + + E+M +       
Sbjct: 61  LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y   I  +C   +I  A  L+ +M   G +P   T + L+ G    KRI ++++  +Q
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+     P    F  +I  L     A +A  ++   + +G  PN +TY  ++ G  K G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
               L L  +ME   I   +  + ++I SLC+   +++A   FK M++  + P V  Y S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+      G  + A  L  +M+ + + P+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPN 329



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 85/208 (40%)

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           R FS+ S  Y   +       K+++A  L   M  +   P    FN L+   AK K+ + 
Sbjct: 44  RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
            +S  E+M   +++     +N +I   C       A  +L   +  G+ P+ +T S L+ 
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           GY     I + + L  +M      P    +T+LI  L    K  EA      M      P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +  Y  +V    ++G+   AL+L  +M
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKM 251


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 174/371 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE    +   +  RG ++++  FN +I    K         + + M E    P+  T   
Sbjct: 291 FEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNI 350

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+  CKGG+++   ++L++   +   P     T L+    ++    +   +L R+    
Sbjct: 351 MINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIG 410

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D ++Y   ++  V    ++ AL+V E+M+++G   ++ +Y   +   C+ G+I    
Sbjct: 411 EKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMK 470

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM +  ++P    F  LI+G  +   ++E++   + ++ + + P    +N MI+  
Sbjct: 471 LLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGF 530

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G    A   L        +P+E TYS +I GY K+ ++   LK++ +M      P +
Sbjct: 531 CKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNV 590

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YTSLI+  C+   +  A+K F  MKS  LVP V  Y +LVG   + G   +A  + E 
Sbjct: 591 ITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFEL 650

Query: 364 MVSEGLKPSTS 374
           M+  G  P+ +
Sbjct: 651 MLMNGCLPNDA 661



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 147/318 (46%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T   LI+  CK G+ +    +L  +  +  +  V V  ++I    +   + E   +
Sbjct: 273 PTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEM 332

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+RM       D   Y++++    K   +E A  + E+  +RG   N F YT  + AYC+
Sbjct: 333 LRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCK 392

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G   +A+ ++  +   G K    ++   I G   A  I+ +L   E+MM + + P    
Sbjct: 393 KGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQI 452

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC+ G       +L+  LD+   P+   ++ LI G+ + GE+ E +K++  + 
Sbjct: 453 YNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVII 512

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K + P +  Y ++I   C+ GK+ +A      M S    P    Y +++  ++++ + +
Sbjct: 513 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMS 572

Query: 356 KALHLCEEMVSEGLKPST 373
            AL +  +M+    KP+ 
Sbjct: 573 SALKMFGQMMKHKFKPNV 590



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 161/355 (45%), Gaps = 4/355 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPNEATIRTLISALCKGGQLQTY 77
           + ++ N L++ + KS + D+  ++Y  ML+         +  T   ++  LC  G+++  
Sbjct: 165 TFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEG 224

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++    GK C P V+    +I    ++  ++     L  +  K ++     Y  ++  
Sbjct: 225 RRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALING 284

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K    E+   +  EM  RG + N  V+   I A  +YG + EA  +++ M   G  P 
Sbjct: 285 FCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPD 344

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N++I    K  RIEE+    E+   R LLP+  ++  ++   C+ G+  +A+GML 
Sbjct: 345 ITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLF 404

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + G   + ++Y   I G    GEI   L +  +M  K + P    Y  L+S LC+ G
Sbjct: 405 RIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKG 464

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++         M   ++ P V ++ +L+   +  G   +A+ + + ++ +G+ P 
Sbjct: 465 RIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPG 519



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 154/339 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + + G    + ++N +I+   K  R +    + +   E    PN+ +   L+ 
Sbjct: 329 AAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMH 388

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G       ML RI        ++   + I  ++    I+  +++ ++M+ K +  
Sbjct: 389 AYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFP 448

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    K   + +  ++  EML R    + +V+ T I  +   G+++EA  + 
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIF 508

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + +   G+ P    +N +I+G  K  ++ ++LS   +M S    P    ++ +I    + 
Sbjct: 509 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQ 568

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +   A  M    +   F PN ITY+ LI G+ K+ ++    K++  M+   + P +  Y
Sbjct: 569 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTY 628

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           T+L+    + GK E A   F++M  +  +P    +  L+
Sbjct: 629 TTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLI 667



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 135/316 (42%), Gaps = 16/316 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            L+S+   IH V  +   D+   + + M+E   +P+      L+S LCK G++     +L
Sbjct: 414 DLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLL 473

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +   P V V  +LI   I+   ++E + + K ++RK +    + Y+ ++    K 
Sbjct: 474 SEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKF 533

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  AL    EM     + + + Y+T I  Y +   +  A  +  +M     KP   T+
Sbjct: 534 GKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITY 593

Query: 202 NLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
             LI G C KA  I     +   M S  L+P+   +  ++    + G  ++A  +  L L
Sbjct: 594 TSLINGFCKKADMIRAEKVF-SGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELML 652

Query: 261 DKGFSPNEITYSHLIGGY--------------AKEGEIQEVLKLYYEMEYKSISPTLPAY 306
             G  PN+ T+ +LI G               +KE E   +L  +  M        + AY
Sbjct: 653 MNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAY 712

Query: 307 TSLISSLCQCGKLEEA 322
            S+I  LC+ G ++ A
Sbjct: 713 NSVIVCLCKHGTVDTA 728



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/289 (21%), Positives = 129/289 (44%), Gaps = 5/289 (1%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           CS   + ++SL+  +       E  ++L+ M  +++     A+S ++ A  +  +L+ AL
Sbjct: 91  CSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRAL 150

Query: 149 VVYEEMLKRGFSANSFVYTTFI-GAYCEYGKIEEA----NCLMQEMENAGLKPYDETFNL 203
            ++  + +      +FV +  +     + GK++ A    + ++Q  +  G    + T ++
Sbjct: 151 QLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 210

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +++G     +IEE     +    +  +P    +N +I   C+ G+ + A   L     KG
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P   TY  LI G+ K GE + V +L  EM  + ++  +  + ++I +  + G + EA 
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + M      P +  Y  ++    + G   +A  L E+    GL P+
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPN 379


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 167/364 (45%), Gaps = 4/364 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDL--VWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           +G   +++++N  I    K  R DL  V  I   M +     N  T   LI      G++
Sbjct: 254 KGVKANVVTYNAFIEGYFK--RLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKI 311

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +    + + +  K     V V TS+I    +   ++  +VL   M  K +I     Y  +
Sbjct: 312 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGAL 371

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           ++   K   +E+A ++  EM  +G   N  ++ T I  YCE G ++EA  L   ME  GL
Sbjct: 372 IHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGL 431

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +     +N +  G  K  R +E+      M+ R + P+  +F  +I   C+ GN  +A  
Sbjct: 432 ESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKR 491

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +     +KG  PN ITY+ LI GY+K G ++E  KL  E+E + + P +   TSLI   C
Sbjct: 492 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGEC 551

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             GK++ A K F  M    LVP V  Y +++    + G   +A  L +EM   GL P  +
Sbjct: 552 IDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDT 611

Query: 375 YLCS 378
              S
Sbjct: 612 VYSS 615



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 7/312 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RLFE        + ++G    +  + ++I    +S        ++  M +    P+  T 
Sbjct: 316 RLFE-------EMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTY 368

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI  +CK GQ++    +++ + GK      ++  +LI    +   ++E + L   M +
Sbjct: 369 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 428

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  D  AY+ I     K+   + A  +   M++RG S N+  +TT I  YC+ G   E
Sbjct: 429 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVE 488

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + +EME  G  P   T+N+LI+G +K   ++E+    +++ +R L+P       +I 
Sbjct: 489 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIH 548

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  G    A  +      +G  PN +TY+ +I G +K+G  +E  KLY EM+   ++P
Sbjct: 549 GECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTP 608

Query: 302 TLPAYTSLISSL 313
               Y+SL+ SL
Sbjct: 609 DDTVYSSLVGSL 620



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 156/346 (45%), Gaps = 13/346 (3%)

Query: 40  DLVWRIY-------------QHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           DL++R+Y             +HM +   + +E +    + AL +GGQ+ + +    R+  
Sbjct: 159 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVN 218

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
                 V   T ++  + +   +E G  L+  +  K +  + + Y+  +    K  +L  
Sbjct: 219 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 278

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
              +   M K G + N   YT  I  +   GKIEEA  L +EM   G++     +  +I 
Sbjct: 279 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 338

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              ++  ++ +L   ++M  + L+PS   +  +I  +C+ G  + A  ++     KG   
Sbjct: 339 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 398

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N + ++ LI GY + G + E L+L   ME K +   + AY S+ S LC+  + +EA    
Sbjct: 399 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 458

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             M    + P    + +L+ I+ ++GN  +A  +  EM  +G  P+
Sbjct: 459 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 504


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 172/366 (46%), Gaps = 1/366 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLI 65
           A  V   +   GF   L ++N L   + ++ + D  +R+   M       P+  T  TL 
Sbjct: 293 ATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLA 352

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A  K       + +L+ +  K     ++ +  +I  + ++  +E  +  L +M    + 
Sbjct: 353 DACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLA 412

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ +++A  K  N+  A  + +EM++RG   ++F   T +   C+  + EEA  L
Sbjct: 413 PDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGL 472

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +Q     G  P + ++  ++    K    E +L   ++M+ +KL PS S +N +I+ L  
Sbjct: 473 LQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSR 532

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  K+A   L   ++KG  P++ TY+ +I  Y KEG+++   + + +M   S  P +  
Sbjct: 533 MGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVT 592

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             +L++ LC  GKL++A K F+          V  Y +L+    + G+   ALH   +M 
Sbjct: 593 CNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADME 652

Query: 366 SEGLKP 371
           + GL+P
Sbjct: 653 ARGLQP 658



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 146/321 (45%), Gaps = 1/321 (0%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           +PN  T   L+   C  G L   +  L  + G   SP  +   +L+    ++  + E   
Sbjct: 201 HPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARA 260

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL RM +  +      Y+ +V A  ++  ++ A  V E M   GF  + + Y       C
Sbjct: 261 LLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLC 320

Query: 175 EYGKIEEANCLMQEMENAG-LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           + GK++EA  L  EME  G L P   T+N L + C K +   ++L   E+M  + +  + 
Sbjct: 321 QAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
              N +I+ LC+ G  + A G L    D G +P+ ITY+ LI  + K G I +   L  E
Sbjct: 381 VTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDE 440

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M  + +        +++ +LC+  + EEA    +       +P    Y +++  + ++ N
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500

Query: 354 KAKALHLCEEMVSEGLKPSTS 374
              AL L +EM+ + L PS S
Sbjct: 501 SEPALRLWDEMIEKKLTPSIS 521



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 174/378 (46%), Gaps = 11/378 (2%)

Query: 7   AFDVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           AF +   +E+ G  L  ++++NTL     K   +    R+ + M E        T   +I
Sbjct: 328 AFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVI 387

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LCK G+L+  +  L+++     +P VI   +LI    +   I +   L+  M+R+ + 
Sbjct: 388 KGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLK 447

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            DT   + ++Y   K +  E A  + +   +RGF  +   Y T + AY +    E A  L
Sbjct: 448 LDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRL 507

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             EM    L P   T+N LI+G ++  R++E++    ++M + L+P  + +N +I   C+
Sbjct: 508 WDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCK 567

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+ + A       ++  F P+ +T + L+ G    G++ + LKL+     K     +  
Sbjct: 568 EGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVIT 627

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI ++C+ G ++ A  +F  M++  L P    Y  ++    E G   +A ++  ++ 
Sbjct: 628 YNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLA 687

Query: 366 SEG----------LKPST 373
             G          LKPS+
Sbjct: 688 ESGTLSQSFSSPLLKPSS 705



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 142/316 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   + +RG  L   + NT+++ + K  R +    + Q   +    P+E +  T+++
Sbjct: 434 AYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMA 493

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K    +  + + D +  K+ +P +    +LI  + +  R++E +  L  ++ K ++ 
Sbjct: 494 AYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVP 553

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++I++A  K  +LE+A   + +M++  F  +     T +   C  GK+++A  L 
Sbjct: 554 DDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLF 613

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +     G K    T+N LI+   K   ++ +L +   M +R L P    +N ++  L E 
Sbjct: 614 ESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEA 673

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  ML    + G      +   L      E E  +  K   E           AY
Sbjct: 674 GRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAY 733

Query: 307 TSLISSLCQCGKLEEA 322
           T L++ LC  G+ +EA
Sbjct: 734 TKLVNGLCTSGQFKEA 749



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 110/277 (39%), Gaps = 36/277 (12%)

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           L   A+    + +++L  +  ++      N + +   +  +C  G + +A   +  M+  
Sbjct: 174 LSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGF 233

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           GL P   T+N L+    +   + E+ +   +M    + P+   +N ++      G  KQA
Sbjct: 234 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQA 293

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY---------------- 296
             ++      GF P+  TY+ L  G  + G++ E  +L  EME                 
Sbjct: 294 TKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLAD 353

Query: 297 --------------------KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
                               K +  TL  +  +I  LC+ G+LE A      M    L P
Sbjct: 354 ACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAP 413

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            V  Y +L+  H + GN AKA  L +EMV  GLK  T
Sbjct: 414 DVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDT 450



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 35/312 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A  + +   QRGF    +S+ T++    K   ++   R++  M+E    P+ +T  T
Sbjct: 466 YEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNT 525

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L + G+L+  +D L+ +  K   P       +I    +E  +E       +M+  +
Sbjct: 526 LIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS 585

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D +  + ++        L+ AL ++E  +++G   +   Y T I   C+ G ++ A 
Sbjct: 586 FKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTAL 645

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE---------QMMSRKLLPSCS 234
               +ME  GL+P   T+N+++   ++A R EE+ +            Q  S  LL   S
Sbjct: 646 HFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSS 705

Query: 235 --------------------------AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                                     A+ +++  LC  G  K+A  +L   + KG S + 
Sbjct: 706 VDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDS 765

Query: 269 ITYSHLIGGYAK 280
            TY  L+ G  K
Sbjct: 766 STYITLMEGLVK 777



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 2/173 (1%)

Query: 194 LKPYDETFNLLIEGCAKAKRI--EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           ++P  +  N ++   A++     + SL     +++ +L P+   FN ++   C  G    
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A   L+     G SP+ +TY+ L+  + ++G + E   L   M+   ++PT P Y +L+S
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +  + G +++A K  + M ++   P +  Y  L     + G   +A  L +EM
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM 335



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/210 (19%), Positives = 88/210 (41%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF     + +  F   +++ NTL++ +  + + D   ++++  +E  +  +  T  T
Sbjct: 571 LENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNT 630

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  +CK G + T +     +  +   P       ++  + +  R EE   +L ++    
Sbjct: 631 LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG 690

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            +  + +  L+  + V            EE ++    + S  YT  +   C  G+ +EA 
Sbjct: 691 TLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAK 750

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
            ++ EM   G+     T+  L+EG  K ++
Sbjct: 751 AILDEMMQKGMSVDSSTYITLMEGLVKRQK 780


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 167/364 (45%), Gaps = 4/364 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDL--VWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           +G   +++++N  I    K  R DL  V  I   M +     N  T   LI      G++
Sbjct: 258 KGVKANVVTYNAFIEGYFK--RLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKI 315

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +    + + +  K     V V TS+I    +   ++  +VL   M  K +I     Y  +
Sbjct: 316 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGAL 375

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           ++   K   +E+A ++  EM  +G   N  ++ T I  YCE G ++EA  L   ME  GL
Sbjct: 376 IHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGL 435

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +     +N +  G  K  R +E+      M+ R + P+  +F  +I   C+ GN  +A  
Sbjct: 436 ESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKR 495

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +     +KG  PN ITY+ LI GY+K G ++E  KL  E+E + + P +   TSLI   C
Sbjct: 496 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGEC 555

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             GK++ A K F  M    LVP V  Y +++    + G   +A  L +EM   GL P  +
Sbjct: 556 IDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDT 615

Query: 375 YLCS 378
              S
Sbjct: 616 VYSS 619



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 7/312 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RLFE        + ++G    +  + ++I    +S        ++  M +    P+  T 
Sbjct: 320 RLFE-------EMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTY 372

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI  +CK GQ++    +++ + GK      ++  +LI    +   ++E + L   M +
Sbjct: 373 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 432

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  D  AY+ I     K+   + A  +   M++RG S N+  +TT I  YC+ G   E
Sbjct: 433 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVE 492

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + +EME  G  P   T+N+LI+G +K   ++E+    +++ +R L+P       +I 
Sbjct: 493 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIH 552

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  G    A  +      +G  PN +TY+ +I G +K+G  +E  KLY EM+   ++P
Sbjct: 553 GECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTP 612

Query: 302 TLPAYTSLISSL 313
               Y+SL+ SL
Sbjct: 613 DDTVYSSLVGSL 624



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 156/346 (45%), Gaps = 13/346 (3%)

Query: 40  DLVWRIY-------------QHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           DL++R+Y             +HM +   + +E +    + AL +GGQ+ + +    R+  
Sbjct: 163 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVN 222

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
                 V   T ++  + +   +E G  L+  +  K +  + + Y+  +    K  +L  
Sbjct: 223 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 282

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
              +   M K G + N   YT  I  +   GKIEEA  L +EM   G++     +  +I 
Sbjct: 283 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 342

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              ++  ++ +L   ++M  + L+PS   +  +I  +C+ G  + A  ++     KG   
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 402

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N + ++ LI GY + G + E L+L   ME K +   + AY S+ S LC+  + +EA    
Sbjct: 403 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 462

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             M    + P    + +L+ I+ ++GN  +A  +  EM  +G  P+
Sbjct: 463 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 508


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 158/321 (49%), Gaps = 2/321 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  +  T+I+ LCK  +L+  VD+L  + G  C P       L+  + +E R+EE M L
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M RK +  D + YS ++        L+    +++EML++G S N  VY+  I  +C+
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G   EA  ++  M   G++P   T+  +I G  K  R  ++L   + M  +   PS   
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM- 294
           +N +I  LC+ G    A  +    L+KG     ++Y+ LI G    G++ E +KL+  + 
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 295 -EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
            +   + P +  + ++I  LC+ G+L++A + +  M        +     L+G +++ G 
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307

Query: 354 KAKALHLCEEMVSEGLKPSTS 374
             KA+ L + +   GL PS++
Sbjct: 308 IDKAMELWKRVHKLGLVPSST 328



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 2/311 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEATIRTL 64
           AF +   + ++G  L ++S+NTLI  +  + + D   +++  +LE+  Y  P+  T  T+
Sbjct: 204 AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTV 263

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK G+L   V++ D +  +     +     LI   I+   I++ M L KR+ +  +
Sbjct: 264 IQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGL 323

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           +  +  YS+++    KM  L  A  ++  M   G S   F Y T + + C+   +E+A  
Sbjct: 324 VPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARR 383

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L QEM+ +  +P   +FN++I+G  KA  I  +      M    L P    ++  I RL 
Sbjct: 384 LFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLS 443

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++A G     +  G +P+   Y  LI G+    EI+EV+ L  +M    +   L 
Sbjct: 444 KLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLE 503

Query: 305 AYTSLISSLCQ 315
              S+++ LC 
Sbjct: 504 ITNSILTFLCN 514



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 166/349 (47%), Gaps = 10/349 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L+  A  V   + +RG    + ++  +I  + K  R      ++  M E    P+  T  
Sbjct: 130 LWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYN 189

Query: 63  TLISALCK----GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            LI+ LCK    G   + +  ML++  GKR    V+   +LI+ +    +++E M L   
Sbjct: 190 VLINGLCKEGCIGDAFKIFETMLEK--GKRLE--VVSYNTLIMGLCNNGKLDEAMKLFSS 245

Query: 119 MLRK-NMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           +L   N +  D I ++ ++    K   L+ A+ +Y+ M++RG   N F     IG Y + 
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKS 305

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G I++A  L + +   GL P   T++++I+G  K   +  +     +M    L P+   +
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDY 365

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N ++  LC+  + +QA  +     +    P+ I+++ +I G  K G+I    +L  +M+ 
Sbjct: 366 NTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQ 425

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             ++P    Y+S I+ L + G++EEA   F  M +  + P   +Y+SL+
Sbjct: 426 MGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLI 474



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 159/358 (44%), Gaps = 5/358 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   + ++G   S +++N LI+ + K       ++I++ MLE  +     +  TLI 
Sbjct: 169 ALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIM 228

Query: 67  ALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            LC  G+L   + +   +   G    P VI   ++I  + +E R+++ + +   M+ +  
Sbjct: 229 GLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGS 288

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +     +++   +K   ++ A+ +++ + K G   +S  Y+  I  +C+   +  A  
Sbjct: 289 FGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKG 348

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   M+ +GL P    +N L+    K   +E++    ++M      P   +FN MI    
Sbjct: 349 LFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G+   A  +L      G +P+  TYS  I   +K G+++E    +  M    I+P   
Sbjct: 409 KAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNH 468

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
            Y SLI       ++EE     + M    ++  ++I  S++       N A+ LH+ E
Sbjct: 469 VYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC---NSAEHLHVME 523



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/397 (21%), Positives = 160/397 (40%), Gaps = 37/397 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++G  + ++ ++TLI         D    ++  MLE    PN      LI+  CK G 
Sbjct: 71  MKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGL 130

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +    +L  +  +   P V   T +I  + ++ R  + + L   M  K     T+ Y++
Sbjct: 131 WREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNV 190

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +  A  ++E ML++G       Y T I   C  GK++EA  L   +   G
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250

Query: 194 --LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK----------------------- 228
             ++P   TFN +I+G  K  R+++++   + M+ R                        
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDK 310

Query: 229 ------------LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
                       L+PS + ++ MI   C+      A G+ +     G SP    Y+ L+ 
Sbjct: 311 AMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMA 370

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              KE  +++  +L+ EM+  +  P   ++  +I    + G +  A +    M+   L P
Sbjct: 371 SLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTP 430

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
               Y S +    + G   +A    + M++ G+ P  
Sbjct: 431 DAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDN 467



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 123/250 (49%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M R N++ D ++Y+ I+    K + LE A+ +  EM       NSF Y   +   C+ G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +EEA  L+ EM+  GL+     ++ LI G      ++   +  ++M+ + + P+   ++ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C+ G  ++A  +L    ++G  P+  TY+ +IGG  K+G  ++ L L+  M  K 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P+   Y  LI+ LC+ G + +A K F+ M        V  Y +L+      G   +A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 359 HLCEEMVSEG 368
            L   ++ +G
Sbjct: 241 KLFSSLLEDG 250



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 164/406 (40%), Gaps = 37/406 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+   +E      +  ++  L+  + K  R +   R+   M       +     T
Sbjct: 26  LEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYST 85

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI--------------------LRI 103
           LIS  C  G L     + D +  K  SP V+V + LI                     R 
Sbjct: 86  LISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERG 145

Query: 104 IQEE---------------RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           IQ +               R  + + L   M  K     T+ Y++++    K   +  A 
Sbjct: 146 IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAF 205

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG--LKPYDETFNLLIE 206
            ++E ML++G       Y T I   C  GK++EA  L   +   G  ++P   TFN +I+
Sbjct: 206 KIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQ 265

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K  R+++++   + M+ R    +    + +I    + G   +A  +       G  P
Sbjct: 266 GLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVP 325

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +  TYS +I G+ K   +     L+  M+   +SPTL  Y +L++SLC+   LE+A + F
Sbjct: 326 SSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLF 385

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + MK  +  P    +  ++   L+ G+   A  L  +M   GL P 
Sbjct: 386 QEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPD 431



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 88/185 (47%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M+   + P   ++N +I G  K KR+E+++    +M      P+   +  ++  LC+ G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            ++A  +L     KG   + + YS LI G+  +G +     L+ EM  K ISP +  Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI+  C+ G   EA      M    + P V  Y  ++G   + G   KAL L + M  +G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 369 LKPST 373
            +PST
Sbjct: 181 EEPST 185



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/242 (19%), Positives = 100/242 (41%), Gaps = 35/242 (14%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + A ++ + + + G   S  +++ +I    K    +    ++  M  +   P      
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL+++LCK                                   E  +E+   L + M   
Sbjct: 367 TLMASLCK-----------------------------------ESSLEQARRLFQEMKES 391

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N   DTI++++++   +K  ++ SA  +  +M + G + +++ Y++FI    + G++EEA
Sbjct: 392 NCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEA 451

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                 M  +G+ P +  ++ LI+G      IEE ++   QM    ++      N ++  
Sbjct: 452 KGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTF 511

Query: 243 LC 244
           LC
Sbjct: 512 LC 513



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 36/194 (18%), Positives = 75/194 (38%), Gaps = 35/194 (18%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M +   A  +   ++  G S +L  +NTL+  + K    +   R++Q M E+   P+  +
Sbjct: 340 MHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTIS 399

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I    K G + +  ++L+ +     +P                             
Sbjct: 400 FNIMIDGTLKAGDIHSAKELLNDMQQMGLTP----------------------------- 430

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 D   YS  +    K+  +E A   ++ M+  G + ++ VY + I  +    +IE
Sbjct: 431 ------DAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIE 484

Query: 181 EANCLMQEMENAGL 194
           E   L+++M + G+
Sbjct: 485 EVINLLRQMADMGV 498


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 163/359 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q G SL   ++ +LI    ++   D    I+  M       NE +   LI   C+  ++ 
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +  ++H   C P V   T +I  + Q  R  E + + K M  K+   +   Y++++
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            +  +  N + A  +   ML++G   +   Y   I  YC+ G    A  ++  ME+    
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  + K I +++S   +M+ RKL P+   +N +I   C+ G+   A  +
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L+L  + G  P+E TYS  I    K G ++E   L+  ++ K I      Y++LI   C+
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            GK+ +       M S   VP    Y SL+  + ++ N  +A  L + M+   ++P+  
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAAD 590



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 164/348 (47%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++  LI  + +    D   +I   MLE    P+  T   LI   CK G   + +++L  +
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               CSP       LIL   + + I + M LL +ML + +  + + Y+++++ + K  +L
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            SA  +   M + G   + + Y+ FI   C+ G +EEA  L + ++  G+K  +  ++ L
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K  ++ +     ++M+S   +P+   +N +I   C+  N K+A  ++ + + +  
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P   TY+ LI    K+ E  +   ++ +M      P +  YT+ I + C  G+L++A+ 
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEV 645

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               M +  ++P   +Y   +  +   G+   A  + + M   G +PS
Sbjct: 646 LICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPS 693



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 153/350 (43%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S+  LIH   ++ R D   +++  M E+  +P   T   +I ALC+ G+    ++M   
Sbjct: 275 VSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKE 334

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C P V   T LI  + ++   ++   +L  ML K +I   + Y+ ++    K   
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             SAL +   M     S N+  Y   I  +C    I +A  L+ +M    L+P   T+N+
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  K   +  +      M    L+P    ++  I  LC+ G  ++A  +     +KG
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
              NE+ YS LI GY K G++ +   L  +M      P    Y SLI   C+    +EA 
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
               IM    + P  D Y  L+   L+     +A  + ++M+S G  P  
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDV 624



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 176/397 (44%), Gaps = 35/397 (8%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R ++   F L+L  +N L+ ++++    D +  +Y  ML+++  PN  T+ T+++  CK 
Sbjct: 158 RRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKL 217

Query: 72  GQ-----------------LQTY--------------VDMLDRIH----GKRCSPMVIVN 96
           G                  L T+              VD  + I      K C    +  
Sbjct: 218 GNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSY 277

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           T+LI    +  R++E + L  +M   N       Y++I++A  ++     AL +++EM +
Sbjct: 278 TNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE 337

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           +    N   YT  I + CE    ++A  ++  M   GL P   T+N LI+G  K      
Sbjct: 338 KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSAS 397

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +L     M S    P+   +NE+I   C   N  +A  +L   L++   PN +TY+ LI 
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH 457

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G  KEG++    KL   M    + P    Y+  I +LC+ G +EEA   F+ +K   +  
Sbjct: 458 GQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKA 517

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              IY +L+  + + G  +    L ++M+S G  P++
Sbjct: 518 NEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNS 554



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 149/342 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  +   + ++G   S++++N LI    K   +     I   M  N   PN  T   
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C+G  +   + +L ++  ++  P V+    LI    +E  +     LL  M    
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D   YS+ +    K   +E A  ++E + ++G  AN  +Y+T I  YC+ GK+ +  
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ +M +AG  P   T+N LI+G  K K  +E+    + M+ R + P+   +  +I  L
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +     QA+ M    L  G  P+   Y+  I  Y   G +++   L  +M  K I P  
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDT 659

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             YT  I +  + G ++ A    K M      P    Y  L+
Sbjct: 660 MLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI 701



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 161/359 (44%), Gaps = 6/359 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   + + G      +++  I  + K    +    +++ + E     NE    TLI 
Sbjct: 468 AYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G++     +LD++    C P  I   SLI    +E+  +E  +L+  M+++++  
Sbjct: 528 GYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEP 587

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y++++   +K    + A  ++++ML  G   + F+YT FI AYC +G++++A  L+
Sbjct: 588 AADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLI 647

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   G+ P    + L I+   +   I+ +    ++M      PS   ++ +I+ L   
Sbjct: 648 CKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNA 707

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              + ++      L  G + N+ +         +  + +  L L+ +M     +P    Y
Sbjct: 708 KPKEVSSSSELSDLSSGVASNDFS------NCWRRVDYEFTLDLFGKMAEHGCAPNANTY 761

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
              I+ LC+ G LE A + F  MK     P  DIY SL+G   + G   +A+   + M+
Sbjct: 762 GKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMI 820



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 122/307 (39%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E    S +  ++N LI    +         +   MLE    PN  T   LI 
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH 457

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G L +   +L  ++     P     +  I  + +   +EE   L + +  K +  
Sbjct: 458 GQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKA 517

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + YS ++    K+  +     + ++ML  G   NS  Y + I  YC+    +EA  L+
Sbjct: 518 NEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLV 577

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M    ++P  +T+ +LI+   K    +++    +QM+S    P    +   I   C  
Sbjct: 578 DIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSH 637

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  K A  ++     KG  P+ + Y+  I  Y + G I     +   M      P+   Y
Sbjct: 638 GRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTY 697

Query: 307 TSLISSL 313
           + LI  L
Sbjct: 698 SCLIKHL 704


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 176/356 (49%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF L+ +S+ TLI+ + K  +     ++ + +   +  PN     T+I ++CK   +   
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 231

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+   +  K  SP V+   +LI       ++++   L  +M+ +N+  +   ++++V  
Sbjct: 232 FDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDG 291

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R L+ A  V   M+K+G   + F Y + +  YC   ++ +A  +   +   G+ P 
Sbjct: 292 FCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN 351

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             +++++I G  K K+++E+++  ++M    ++P    +N +I  LC+ G    A  ++ 
Sbjct: 352 IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVD 411

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+G   ++ITY+ ++    K  ++ + + L  +M+ + I P +  YT+L+  LC+ G
Sbjct: 412 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNG 471

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +LE+A   F+ +     +  V+IY +++      G   ++L L  +M   G  P+ 
Sbjct: 472 RLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNA 527



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 172/363 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++ +    +++ +NT+I  + K    +  + +Y  M+     P+  T   LIS
Sbjct: 196 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALIS 255

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+++   D+ +++  +  +P V     L+    +E R++E   +L  M+++ +  
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKP 315

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ ++     ++ +  A  ++  + +RG + N   Y+  I  +C+  K++EA  L 
Sbjct: 316 DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF 375

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   T+N LI+G  K  +I  +L   ++M  R +      +N ++  LC+ 
Sbjct: 376 KEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 435

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +LT   D+G  P+  TY+ L+ G  K G +++   ++ ++  K     +  Y
Sbjct: 436 HQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIY 495

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T++I   C  G  +E+      M+ +  +P    YE ++    +K    KA  L  EM++
Sbjct: 496 TAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMIT 555

Query: 367 EGL 369
            GL
Sbjct: 556 RGL 558



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 167/358 (46%), Gaps = 35/358 (9%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +E  G +  L+  + LI+  ++  +N L + +   +L+    PN  T+ TLI  LC  
Sbjct: 96  RQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLK 155

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           GQ+   +   D++         +   +LI  + +  +    + LL+R+  K +  + + Y
Sbjct: 156 GQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 215

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + I+ +  K++ +  A  +Y EM+ +G S +   Y   I  +C  GK+++A  L  +M  
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   TFN+L++G            +C++                 RRL      K+
Sbjct: 276 ENINPNVYTFNILVDG------------FCKE-----------------RRL------KE 300

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L + + +G  P+  TY+ L+  Y    E+ +   ++  +  + ++P + +Y+ +I 
Sbjct: 301 AKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIH 360

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             C+  K++EA   FK M  ++++P V  Y SL+    + G  + AL L +EM   G+
Sbjct: 361 GFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 135/291 (46%), Gaps = 4/291 (1%)

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +H K   P +     ++  +++       + L ++M    +  D +  S+++    ++  
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              +  V  ++LK G+  N    TT I   C  G+I +A     ++   G      ++  
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  K  +   +L    ++  + + P+   +N +I  +C+     +A  + +  + KG
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+ +TY+ LI G+   G++++   L+ +M +++I+P +  +  L+   C+  +L+EA 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIH--LEKGNKAKALHLCEEMVSEGLKPS 372
               +M    + P V  Y SL+  +  +++ NKAK  H+   +   G+ P+
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK--HIFNTISQRGVNPN 351


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 159/335 (47%), Gaps = 3/335 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S  S N L+  +  + R DL  + ++  L     P+  T  T+IS LC+ GQL+   D+ 
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEE---RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
             I     +P V    SLI    ++     +    +LLK M+   +    + + +++   
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K  N  +A+ V+EEM ++G +A+   Y + I   C  GK+EE   LM+EME+ GL P +
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            TF  +++G  K   + ++  + + M  R + P    +N +I      G  + A  +   
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              KG SPN  TY+ LI G+++ G+ +    L  EM+ K I   +  Y  LI +LC  G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           + +A K    M    L P    Y +++    +KGN
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 135/282 (47%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            A  V   ++Q+G + S++++N+LI  +    + +   ++ + M +    PNE T   ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK G +    D +D +  +   P V++   LI    +  ++E+ M + + M +K + 
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +   Y+ ++    +  +  SA  + +EM ++G  A+   Y   IGA C  G++ +A  L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM   GL+P   T+N +I+G      I+ +     +M   +   +   +N  I+  C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            G   +AN +L   LDK   PN ITY  +  G  ++G   ++
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 4/243 (1%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           V  + ++ A   +   L+R  S + + + T I   C  G++ +A  + ++++  GL P  
Sbjct: 167 VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSV 226

Query: 199 ETFNLLIEG-CAK--AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
            T+N LI+G C K  A  +       ++M+   + P+   F  +I   C+  N   A  +
Sbjct: 227 ATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRV 286

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G + + +TY+ LI G   EG+++E +KL  EME   +SP    +  ++   C+
Sbjct: 287 FEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCK 346

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TS 374
            G + +A+ +   M   ++ P V IY  L+ ++   G    A+ + E M  +G+ P+ T+
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT 406

Query: 375 YLC 377
           Y C
Sbjct: 407 YNC 409



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 3/181 (1%)

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   + N L+ G   AKR++ +       + R++ P    FN +I  LC  G  ++A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKE---GEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           +       G +P+  TY+ LI GY K+   G +  V  L  EM    ISPT   +  LI+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+      A + F+ MK   +   V  Y SL+     +G   + + L EEM   GL P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 372 S 372
           +
Sbjct: 333 N 333


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 3/346 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S  S N L+  +  + R DL  + ++  L     P+  T  T+IS LC+ GQL+   D+ 
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEE---RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
             I     +P V    SLI    ++     +    +LLK M+   +    + + +++   
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K  N  +A+ V+EEM ++G +A+   Y + I   C  GK+EE   LM+EME+ GL P +
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            TF  +++G  K   + ++  + + M  R + P    +N +I      G  + A  +   
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              KG SPN  TY+ LI G+++ G+ +    L  EM+ K I   +  Y  LI +LC  G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           + +A K    M    L P    Y +++    +KGN   A  +   M
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 135/282 (47%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            A  V   ++Q+G + S++++N+LI  +    + +   ++ + M +    PNE T   ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK G +    D +D +  +   P V++   LI    +  ++E+ M + + M +K + 
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +   Y+ ++    +  +  SA  + +EM ++G  A+   Y   IGA C  G++ +A  L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM   GL+P   T+N +I+G      I+ +     +M   +   +   +N  I+  C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            G   +AN +L   LDK   PN ITY  +  G  ++G   ++
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 4/243 (1%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           V  + ++ A   +   L+R  S + + + T I   C  G++ +A  + ++++  GL P  
Sbjct: 167 VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSV 226

Query: 199 ETFNLLIEG-CAK--AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
            T+N LI+G C K  A  +       ++M+   + P+   F  +I   C+  N   A  +
Sbjct: 227 ATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRV 286

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G + + +TY+ LI G   EG+++E +KL  EME   +SP    +  ++   C+
Sbjct: 287 FEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCK 346

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TS 374
            G + +A+ +   M   ++ P V IY  L+ ++   G    A+ + E M  +G+ P+ T+
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTT 406

Query: 375 YLC 377
           Y C
Sbjct: 407 YNC 409



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 3/181 (1%)

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   + N L+ G   AKR++ +       + R++ P    FN +I  LC  G  ++A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKE---GEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           +       G +P+  TY+ LI GY K+   G +  V  L  EM    ISPT   +  LI+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+      A + F+ MK   +   V  Y SL+     +G   + + L EEM   GL P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 372 S 372
           +
Sbjct: 333 N 333


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 164/359 (45%), Gaps = 1/359 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    L+++  +I+ + K    DL   +   M +     +     T+I  LCK   +  
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+ +++  K   P V     LI  +    R  +   LL  ML KN+  D + ++ ++ 
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFV-YTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           A VK   L  A  +Y+EM+K        V Y T I  +C+Y ++EE   + +EM   GL 
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               T+  LI G  +A+  + +    +QM+S  + P    +N ++  LC  GN + A  +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +    + +TY+ +I    K G++++   L+  +  K + P +  YT+++S  C+
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            G  EEAD  F  MK    +P    Y +L+   L  G++A +  L +EM S G     S
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 169/352 (48%), Gaps = 1/352 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F+ L+  + K ++ DLV  + + M       N  T    I+  C+  QL   + +L
Sbjct: 74  SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P ++   SL+       RI E + L+ +M+      DT+ ++ +V+   + 
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A+ + E M+ +G   +   Y   I   C+ G+ + A  L+ +ME   ++     +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+G  K K ++++     +M ++ + P    +N +I  LC  G    A+ +L+  L+
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLE 320
           K  +P+ + ++ LI  + KEG++ E  KLY EM + K   P + AY +LI   C+  ++E
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           E  + F+ M    LV     Y +L+    +  +   A  + ++MVS+G+ P 
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 126/275 (45%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           +++Q+ ++++ + L   M++       + +S ++ A  KM   +  + + E+M   G S 
Sbjct: 49  KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 108

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           N + Y+ FI  +C   ++  A  ++ +M   G  P   T N L+ G     RI E+++  
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           +QM+     P    F  ++  L +   A +A  ++   + KG  P+ +TY  +I G  K 
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           GE    L L  +ME   I   +  Y ++I  LC+   +++A   F  M++  + P V  Y
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
             L+      G  + A  L  +M+ + + P   + 
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 36/302 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   +E +G    + ++N LI  +    R     R+   MLE    P+      LI 
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328

Query: 67  ALCKGGQLQTYVDMLDR-IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           A  K G+L     + D  +  K C P V+   +LI    + +R+EEGM + + M ++ ++
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388

Query: 126 HDTIAYSLIVYAKVKMR-----------------------------------NLESALVV 150
            +T+ Y+ +++   + R                                   N+E+ALVV
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           +E M KR    +   YTT I A C+ GK+E+   L   +   G+KP   T+  ++ G  +
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
               EE+ +   +M     LP+   +N +IR     G+   +  ++      GF+ +  T
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568

Query: 271 YS 272
           + 
Sbjct: 569 FG 570



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 56/261 (21%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   +V R + QRG   + +++ TLIH   ++   D    +++ M+ +  +P+  T   L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LC  G ++T                                    +V+ + M +++M
Sbjct: 433 LDGLCNNGNVET-----------------------------------ALVVFEYMQKRDM 457

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ ++ A  K   +E    ++  +  +G   N   YTT +  +C  G  EEA+ 
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM+  G  P   T+N LI   A+ +  +E+ S                  E+I+ + 
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIR--ARLRDGDEAASA-----------------ELIKEMR 558

Query: 245 ECGNAKQAN--GMLTLALDKG 263
            CG A  A+  G++T  L  G
Sbjct: 559 SCGFAGDASTFGLVTNMLHDG 579


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 185/406 (45%), Gaps = 37/406 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A ++ + + + G  +S  +++ LI    +  + D   R+ + ML     P   T  T
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++  LCK G++     +LD +  K   P ++   +LI    +   I E  +L   +  + 
Sbjct: 301 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++   + Y+ ++    +M +L+ A+ + +EM+K G   + F +T  +  +C+ G +  A 
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAK 420

Query: 184 CLMQEMENAGLKPYDE------------------------------------TFNLLIEG 207
            L  EM N GL+P D                                     T+N+ I+G
Sbjct: 421 ELFDEMLNRGLQP-DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDG 479

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K   ++E+    ++M+   L+P    +  +I      G+ ++A  +    L KG  P+
Sbjct: 480 LHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPS 539

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            +TY+ LI  YA  G ++  +  ++EM  K + P +  Y +LI+ LC+  K+++A K+F 
Sbjct: 540 VVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFT 599

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            M++  + P    Y  L+  +   G+  +AL L ++M+   ++P +
Sbjct: 600 EMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 645



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 163/350 (46%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++N L++ ++ S   +    + Q ML      +  T   LI   C+ GQL     + + 
Sbjct: 226 VTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEE 285

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +   P ++   +++  + +  R+ +   LL  M+ KN++ D ++Y+ ++Y   ++ N
Sbjct: 286 MLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGN 345

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A +++ E+  RG   +   Y T I   C  G ++ A  L  EM   G  P   TF +
Sbjct: 346 IGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTI 405

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+ G  K   +  +    ++M++R L P   A+   I    + G+  +A GM    L +G
Sbjct: 406 LVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG 465

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           F P+ ITY+  I G  K G ++E  +L  +M Y  + P    YTS+I +    G L +A 
Sbjct: 466 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 525

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             F  M S  + P V  Y  L+  +  +G    A+    EM  +G+ P+ 
Sbjct: 526 AVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNV 575



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 1/347 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            L+S+NTLI+  T+       + ++  +      P+  T  TLI  LC+ G L   + + 
Sbjct: 329 DLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLK 388

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +      P V   T L+    +   +     L   ML + +  D  AY   +  ++K+
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 448

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +   A  + EEML RGF  +   Y  FI    + G ++EA+ L+++M   GL P   T+
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I     A  + ++ +   +M+S+ + PS   +  +I      G  K A        +
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI G  K  ++ +  K + EM+ K ISP    YT LI+  C  G  +E
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQE 628

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           A + +K M    + P    + +L+  HL K  K+  +   E +++ G
Sbjct: 629 ALRLYKDMLDREIQPDSCTHSALLK-HLNKDYKSHVVRHLENVIAAG 674



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 169/383 (44%), Gaps = 3/383 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA +V   + + G   +++++NT++    K  +     ++   M +    PN+ T   L
Sbjct: 172 DVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVL 231

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++ L   G+L+   +++  +              LI    ++ +++E   L + ML +  
Sbjct: 232 VNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGA 291

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           +   + Y+ I+Y   K   +  A  + + M+ +    +   Y T I  Y   G I EA  
Sbjct: 292 VPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFL 351

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  E+   GL P   T+N LI+G  +   ++ ++   ++M+     P    F  ++R  C
Sbjct: 352 LFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFC 411

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + GN   A  +    L++G  P+   Y   I G  K G+  +   +  EM  +   P L 
Sbjct: 412 KLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 471

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y   I  L + G L+EA +  K M  + LVP    Y S++  HL  G+  KA  +  EM
Sbjct: 472 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEM 531

Query: 365 VSEGLKPST---SYLCSASTCRG 384
           +S+G+ PS    + L  +   RG
Sbjct: 532 LSKGIFPSVVTYTVLIHSYAVRG 554



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 6/310 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   L  RG   S++++NTLI  + +    D+  R+   M+++   P+  T   L+ 
Sbjct: 349 AFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVR 408

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI---EEGMVLLKRMLRKN 123
             CK G L    ++ D +  +   P      + I RI+ E ++    +   + + ML + 
Sbjct: 409 GFCKLGNLPMAKELFDEMLNRGLQP---DRFAYITRIVGELKLGDPSKAFGMQEEMLARG 465

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++ +    K+ NL+ A  + ++ML  G   +   YT+ I A+   G + +A 
Sbjct: 466 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 525

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  EM + G+ P   T+ +LI   A   R++ ++ +  +M  + + P+   +N +I  L
Sbjct: 526 AVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 585

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     QA    T    KG SPN+ TY+ LI      G  QE L+LY +M  + I P  
Sbjct: 586 CKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 645

Query: 304 PAYTSLISSL 313
             +++L+  L
Sbjct: 646 CTHSALLKHL 655



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 3/240 (1%)

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY-GKIEEANCLMQEMENAG 193
           +YAK  M  LE  L+V+ +M+ +G   +       +    +    I+ A  +   M   G
Sbjct: 128 IYAKKSM--LEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECG 185

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   T+N +++   K  +++E+L    QM     LP+   +N ++  L   G  +QA 
Sbjct: 186 IRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAK 245

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++   L  G   +  TY  LI GY ++G++ E  +L  EM  +   PTL  Y +++  L
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGL 305

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G++ +A K   +M + +L+P +  Y +L+  +   GN  +A  L  E+   GL PS 
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSV 365



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 8/221 (3%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQ-----EMENAGLKPYDETFNLLIEGCAKAK 212
           GF  +   Y   +      G +  A C+M+     +MEN  +        L I   AK  
Sbjct: 76  GFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWI--YAKKS 133

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA-KQANGMLTLALDKGFSPNEITY 271
            +E+ L    +M+S+ +LP     N ++R L +  ++   A  +  + ++ G  P  +TY
Sbjct: 134 MLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + ++  + K+G++QE L+L  +M+     P    Y  L++ L   G+LE+A +  + M  
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L      Y+ L+  + EKG   +A  L EEM+S G  P+
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPT 294


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 184/376 (48%), Gaps = 2/376 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR    A  V   + +RGF+ ++ ++N L+  + ++        + + M +N   P+  +
Sbjct: 120 MRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             T+I   C+G +L+  + + + + G  CS  ++    LI    +  +++E M LLK M 
Sbjct: 180 YNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMK 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +  D I Y+ ++        L+    +++E+L+RG S  +  Y T I  +C+ G+++
Sbjct: 240 HKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA+ + + M   G++P   T+  LI+G     + +E+L     M+ +   P+   +N +I
Sbjct: 300 EASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIII 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-- 298
            +LC+      A  ++ L   +   P+ ITY+ L+GG   +G++ E  KL Y M   S  
Sbjct: 360 NKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P + ++ +LI  LC+  +L +A   + ++        +     L+   L+ G+  KA+
Sbjct: 420 TDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAM 479

Query: 359 HLCEEMVSEGLKPSTS 374
            L +++ +  + P++ 
Sbjct: 480 ELWKQISNSKIVPNSD 495



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 1/354 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  EVAF   R + +    ++ +S + L+    +  +      +   ML+     N    
Sbjct: 86  RNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNY 145

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  LC+  +    V +L  +      P V+   ++I    + + +E+ + L   M  
Sbjct: 146 NILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQG 205

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                  + + +++ A  K   ++ A+ + +EM  +G  A+  VYT+ I  +C+ G+++ 
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDR 265

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              L  E+   G  P   T+N LI G  K  R++E+    E MM R + P+   +  +I 
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLID 325

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC  G  K+A  +L L L K   PN +TY+ +I    K+  + + L++   M+ +   P
Sbjct: 326 GLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRP 385

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH-LEKGNK 354
               Y SL+  LC  G L+EA K   +M   S     D+      IH L KGN+
Sbjct: 386 DNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNR 439



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 173/410 (42%), Gaps = 38/410 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + ++ +G    LI + +LI         D    ++  +LE    P   T  TLI 
Sbjct: 231 AMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+L+   ++ + +  +   P V   T LI  +    + +E + LL  ML+K+   
Sbjct: 291 GFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEP 350

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++I+    K   +  AL + E M KR    ++  Y + +G  C  G ++EA+ L+
Sbjct: 351 NVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLL 410

Query: 187 QEM--ENAGLKPYDETFNLLIEGCAKAKRIEESLS------------------------- 219
             M  +++   P   +FN LI G  K  R+ ++L                          
Sbjct: 411 YLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTL 470

Query: 220 ----------YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
                       +Q+ + K++P+   +  MI   C+ G    A G+L         P+  
Sbjct: 471 KSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVF 530

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+ L+    K+G + +  +L+ EM+     P + ++  +I    + G ++ A+     M
Sbjct: 531 DYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGM 590

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
               L P +  Y  L+   L+ G   +A+   ++M+  G +P  +++C +
Sbjct: 591 SHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPD-AHICDS 639



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/384 (22%), Positives = 180/384 (46%), Gaps = 11/384 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++  ++ +RG   ++ ++  LI  +    +     ++   ML+    PN  T   +I+
Sbjct: 301 ASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIIN 360

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--M 124
            LCK   +   +++++ +  +R  P  I   SL+  +  +  ++E   LL  ML+ +   
Sbjct: 361 KLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYT 420

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I+++ +++   K   L  AL +Y+ ++++  + +       + +  + G + +A  
Sbjct: 421 DPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAME 480

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++ N+ + P  +T+  +I+G  K   +  +     +M   +L PS   +N ++  LC
Sbjct: 481 LWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLC 540

Query: 245 ECGNAKQANGMLT-LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           + G   QA  +   +  D  F P+ I+++ +I G  K G+I+    L   M +  +SP L
Sbjct: 541 KKGTLDQAWRLFEEMQRDDSF-PDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDL 599

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI+   + G L+EA  +F  M      P   I +S++   + +G   K     ++
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKK 659

Query: 364 MVSEGL---KPST----SYLCSAS 380
           +V + +   K  T     Y+CS+S
Sbjct: 660 LVDKDVVLDKELTCTVMDYMCSSS 683



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 127/282 (45%)

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
           +     +L+  +++    E      ++ML  +   + ++ S ++   V+MR    A  V 
Sbjct: 71  LSFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVL 130

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
             MLKRGF+ N + Y   +   C   +  +A  L++EM    L P   ++N +I G  + 
Sbjct: 131 ALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEG 190

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           K +E++L    +M       S   +  +I   C+ G   +A G+L     KG   + I Y
Sbjct: 191 KELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVY 250

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI G+   GE+     L+ E+  +  SP    Y +LI   C+ G+L+EA + F+ M  
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMME 310

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + P V  Y  L+      G   +AL L   M+ +  +P+ 
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNV 352


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 164/357 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG    +++++++I  + K+   D    +   M++N   P+  T  +++   C  GQ +
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 288

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L ++      P V+  +SL+  + +  R  E   +   M ++ +  D   Y  ++
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLL 348

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   L     + + M++ G   +  V+   I AY +  K+++A  +  +M   GL 
Sbjct: 349 QGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLN 408

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  +I+   K+  +++++ Y EQM+   L P+   +  +I  LC C    +A  +
Sbjct: 409 PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL 468

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   LD+G   N I ++ +I  + KEG + E  KL+  M    + P +  Y +LI   C 
Sbjct: 469 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK++EA K    M S  + P +  Y +L+  +        AL L +EMVS G+ P+
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 162/356 (45%), Gaps = 2/356 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G     +++N+++H    S +        + M  +   PN  T  +L++
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+      + D +  +   P +    +L+     +  + E   LL  M+R  +  
Sbjct: 315 YLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +++++ A  K   ++ A++V+ +M + G + N   Y T I   C+ G +++A    
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + GL P    +  LI G     + +++     +M+ R +  +   FN +I   C+ 
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   ++  +  L +  G  P+ ITY+ LI G    G++ E  KL   M    + P +  Y
Sbjct: 495 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKAKALHL 360
            +LI+  C+  ++++A   FK M S  + P +  Y  ++    H  +   AK L++
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 610



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 169/366 (46%), Gaps = 8/366 (2%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM-LDR 83
           ++  LI    ++ R DL +    ++++     +  T   L+  LC   +    +D+ L R
Sbjct: 94  TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---NMIHDTIAYSLIVYAKVK 140
           +    C P V    +L+  +  E R +E + LL  M          D ++Y+ ++    K
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             + + A   Y EML RG   +   Y++ I A C+   +++A  ++  M   G+ P   T
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N ++ G   + + +E++   ++M S  + P+   ++ ++  LC+ G + +A  +     
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G  P+  TY  L+ GYA +G + E+  L   M    I P    +  LI +  +  K++
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS----TSYL 376
           +A   F  M+ H L P V  Y +++ +  + G+   A+   E+M+ EGL P+    TS +
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 377 CSASTC 382
               TC
Sbjct: 454 HGLCTC 459



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 153/328 (46%), Gaps = 1/328 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G   +++++++L++ + K+ R+    +I+  M +    P+ AT RTL+ 
Sbjct: 290 AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 349

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V   LI    ++E++++ M++  +M +  +  
Sbjct: 350 GYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP 409

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y  ++    K  +++ A++ +E+M+  G + N  VYT+ I   C   K ++A  L+
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I+   K  R+ ES    + M+   + P    +N +I   C  
Sbjct: 470 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 529

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L   +  G  P+ +TY  LI GY +   + + L L+ EM    +SP +  Y
Sbjct: 530 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 589

Query: 307 TSLISSLCQCGKLEEADK-YFKIMKSHS 333
             ++  L    +   A + Y  I KS +
Sbjct: 590 NIILQGLFHTRRTAAAKELYVSITKSGT 617



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 156/328 (47%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI    K ++ D    ++  M ++   PN     T+I  LCK G +   +   +++ 
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  +P +IV TSLI  +   ++ ++   L+  ML + +  +TI ++ I+ +  K   + 
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   +   Y T I   C  GK++EA  L+  M + G+KP   T+  LI
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  +  R++++L+  ++M+S  + P+   +N +++ L        A  +       G  
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L +CG+++EA   
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           F    ++ LVP V  Y  +    +E+G+
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGS 706



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 168/371 (45%), Gaps = 13/371 (3%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPNEATIRTLI 65
           V R + + G    + S+N L+  +   +R+     +  HM+ + R     P+  +  T++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL-HMMADDRGGGSPPDVVSYNTVL 208

Query: 66  SALCKGGQ----LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           +   K G       TY +MLDR       P V+  +S+I  + + + +++ M +L  M++
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDR----GILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D + Y+ I++        + A+   ++M   G   N   Y++ +   C+ G+  E
Sbjct: 265 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 324

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   M   GL+P   T+  L++G A    + E  +  + M+   + P    FN +I 
Sbjct: 325 ARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              +     QA  + +     G +PN + Y  +I    K G + + +  + +M  + ++P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  YTSLI  LC C K ++A++    M    +      + S++  H ++G   ++  L 
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 362 EEMVSEGLKPS 372
           + MV  G+KP 
Sbjct: 505 DLMVRIGVKPD 515



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 141/331 (42%), Gaps = 10/331 (3%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y EQ    G + ++I + +LIH +   D+ D    +   ML+     N     ++I
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P +I   +LI       +++E   LL  M+  
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVK---PDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y  ++    ++  ++ AL +++EM+  G S N   Y   +       +   A
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 605

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 606 KELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 665

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L +CG   +A  +       G  P+  TYS +     ++G ++E+  L+  ME    S  
Sbjct: 666 LLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSAD 725

Query: 303 LPAYTSLISSLCQCGKLEEADKY-FKIMKSH 332
                S++  L Q G +  A  Y F I + H
Sbjct: 726 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKH 756



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 4/149 (2%)

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           K+ P+   +  +I   C  G        L   + KGF  + IT++ L+ G   +    + 
Sbjct: 87  KVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDA 146

Query: 288 LKLYY-EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM---KSHSLVPGVDIYES 343
           + +    M      P + +Y +L+  LC   + +EA +   +M   +     P V  Y +
Sbjct: 147 MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNT 206

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++    ++G+  KA     EM+  G+ P 
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPD 235


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 172/372 (46%), Gaps = 3/372 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A D+  ++ +     S+I F  L++V+ K  + D+V  +  H+       +  T   
Sbjct: 53  FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++  C+  Q       L ++      P ++  TSLI       R+EE M ++ +M+   
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ I+ +  K  ++  AL ++++M   G   +  +YT+ +   C  G+  +A+
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ M    +KP   TFN LI+   K  +  ++     +M+   + P+   +  +I   
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A  M  L   KG  P+ + Y+ LI G+ K  ++ + +K++YEM  K ++   
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT+LI    Q GK   A + F  M S  + P +  Y  L+      G   KAL + E+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412

Query: 364 MVS---EGLKPS 372
           M     +G+ P+
Sbjct: 413 MQKREMDGVAPN 424



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 172/359 (47%), Gaps = 3/359 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   +++F +LI+     +R +    +   M+E    P+     T+I +LCK G +   
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + D++      P V++ TSL+  +    R  +   LL+ M ++ +  D I ++ ++ A
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK      A  +Y EM++   + N F YT+ I  +C  G ++EA  +   ME  G  P 
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +  LI G  K K++++++    +M  + L  +   +  +I+   + G    A  + +
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM---EYKSISPTLPAYTSLISSLC 314
             + +G  PN  TY+ L+      G++++ L ++ +M   E   ++P +  Y  L+  LC
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             GKLE+A   F+ M+   +  G+  Y  ++    + G    A++L   + S+G+KP+ 
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 141/301 (46%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           Q    +D+   +   R  P +I  T L+  I + ++ +  + L   +    + HD    +
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           L++    +      A     +M+K GF  +   +T+ I  +C   ++EEA  ++ +M   
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G+KP    +  +I+   K   +  +LS  +QM +  + P    +  ++  LC  G  + A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           + +L     +   P+ IT++ LI  + KEG+  +  +LY EM   SI+P +  YTSLI+ 
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G ++EA + F +M++    P V  Y SL+    +      A+ +  EM  +GL  +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351

Query: 373 T 373
           T
Sbjct: 352 T 352



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 3/292 (1%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R     +I+FN LI    K  +      +Y  M+     PN  T  +LI+  C  
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +     M   +  K C P V+  TSLI    + +++++ M +   M +K +  +TI Y
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL---MQE 188
           + ++    ++     A  V+  M+ RG   N   Y   +   C  GK+++A  +   MQ+
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
            E  G+ P   T+N+L+ G     ++E++L   E M  R++      +  +I+ +C+ G 
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            K A  +      KG  PN +TY+ +I G  +EG   E   L+ +M+   +S
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 172/369 (46%), Gaps = 4/369 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGG 72
           L + G     I   T +  +  + R D    +  H +  +   P+  +  T+I +LC   
Sbjct: 150 LLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDS 209

Query: 73  QLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
           + Q  +DM+ R+   G RCSP V+   ++I    ++  + +   L   M++K ++ D   
Sbjct: 210 RSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGT 269

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ IV A  K R ++ A  V  +M+ +G   +   Y   I  Y   G  +E+  + ++M 
Sbjct: 270 YNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMT 329

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           + GL P   TF+  +    K  R +++    + M ++  +P   +++ ++      G   
Sbjct: 330 SKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFA 389

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             N +     DKG   N    + LI  +AK G + E + ++ EM+ + + P +  Y++LI
Sbjct: 390 DMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLI 449

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL- 369
           S+ C+ G+L +A + F  M S  + P   +Y SL+      G+  KA     EM+S+GL 
Sbjct: 450 SAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLH 509

Query: 370 KPSTSYLCS 378
           +P+  +  S
Sbjct: 510 RPNIVFFSS 518



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 153/351 (43%), Gaps = 1/351 (0%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N LI    K    D    ++  M      PN  T  TLISA C+ G+L   ++   ++  
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-SLIVYAKVKMRNLE 145
               P   V  SLI        + +    +  M+ K +    I + S I+++      + 
Sbjct: 471 IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  V+  ++  G       + + I  YC  GK+E+A  ++  M + G++P   T N L+
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K+ +I++ L    +M+ +K+ P+   +N ++  L   G    A  M    +D G +
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            +  TY  L+ G  +     E + L++++        +    ++I++L +  + EEA+  
Sbjct: 651 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDL 710

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           F  + +  LVP V  Y  ++   L++G+  +A  +   M   G  PS+  L
Sbjct: 711 FAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 761



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 40/270 (14%)

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-----------NC-- 184
           + +  +L  A V    +L+ G    +   TTF+   C   + +EA           +C  
Sbjct: 136 RARRPDLGPAFVA--RLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVP 193

Query: 185 -----------------------LMQEMENAGLK--PYDETFNLLIEGCAKAKRIEESLS 219
                                  ++Q M   G +  P   +FN +I G  K   + ++ +
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 253

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
              +M+ + ++P    +N ++  LC+     +A  +L   +DKG  P+ +TY+ +I GY+
Sbjct: 254 LFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYS 313

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
             G  +E  K++ +M  K + P    ++S +SSLC+ G+ ++A++ F+ M +   +P + 
Sbjct: 314 CSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIV 373

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            Y  L+  +  +G  A   +L   M  +G+
Sbjct: 374 SYSILLHGYATEGRFADMNNLFHSMADKGI 403



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 138/307 (44%), Gaps = 4/307 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ F+++IH +    R      ++  ++     P   T  +LI   C  G+++    +L
Sbjct: 512 NIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVL 571

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +      P V+ N +L+    +  +I++G++L + ML K +   T+ Y++++   ++ 
Sbjct: 572 DAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRA 631

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
               +A  ++ EM+  G + +   Y   +   C     +EA  L  ++     K      
Sbjct: 632 GRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITIL 691

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I    K +R EE+      + +  L+P+ S +  MIR L + G+ ++A+ M +    
Sbjct: 692 NTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEK 751

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS--LISSLCQCGKL 319
            G +P+    + +I    ++G+I  V   YY  +      +L A T+  L+S     GK 
Sbjct: 752 SGCAPSSRLLNDIIRMLLQKGDI--VKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKH 809

Query: 320 EEADKYF 326
            E  K+ 
Sbjct: 810 REQIKFL 816



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 123/283 (43%), Gaps = 4/283 (1%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR-IH-GKRCSPMVIVNTSLILR 102
           I + M + +  PN     ++I +LC  G++    D+ +  IH G R  P ++   SLI  
Sbjct: 500 ISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR--PTIVTFNSLIDG 557

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
                ++E+   +L  M+   +  D +  + +V    K   ++  L+++ EML +     
Sbjct: 558 YCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPT 617

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           +  Y   +      G+   A  +  EM ++G     +T+ +L++G  +    +E+++   
Sbjct: 618 TVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 677

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           ++ +       +  N MI  L +    ++AN +       G  PN  TY  +I    KEG
Sbjct: 678 KLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEG 737

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            ++E   ++  ME    +P+      +I  L Q G + +A  Y
Sbjct: 738 SVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYY 780



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/291 (18%), Positives = 126/291 (43%), Gaps = 52/291 (17%)

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAY--------CEYGK---IEEANCLMQEMENAG 193
           + A  +++E+L++G   ++     F+ A         C  G    +   N + +E     
Sbjct: 59  DDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 118

Query: 194 LKPYD-ETFNLLIEGCAKAKRIEESLSYCEQMMSRKL----------------------- 229
           + P    T+ +L++ C +A+R +   ++  +++   L                       
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178

Query: 230 -------------LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF--SPNEITYSHL 274
                        +P   ++N +I+ LC    +++A  M+     +G   SP+ ++++ +
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G+ K+GE+ +   L+ EM  K + P +  Y S++ +LC+   +++A+   + M    +
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS--ASTCR 383
            P    Y +++  +   G+  ++  +  +M S+GL P T    S  +S C+
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCK 349


>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g61520, mitochondrial; Flags: Precursor
 gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
 gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 175/373 (46%), Gaps = 8/373 (2%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE------NIRYPNEATIR 62
           D+   +++      +++   LI+ + KS R D    +++ M        N+   +     
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFN 374

Query: 63  TLISALCKGGQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           TLI  LCK G+L+   ++L R+   +RC+P  +    LI    +  ++E    ++ RM  
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  + +  + IV    +   L  A+V + +M K G   N   Y T I A C    +E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A    ++M  AG  P  + +  LI G  + +R  +++   E++          A+N +I 
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+  N ++   MLT    +G  P+ ITY+ LI  + K  + + V ++  +M    + P
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIYESLVGIHLEKGNKAKALHL 360
           T+  Y ++I + C  G+L+EA K FK M  HS V P   IY  L+    + GN  +AL L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674

Query: 361 CEEMVSEGLKPST 373
            EEM  + ++P+ 
Sbjct: 675 KEEMKMKMVRPNV 687



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 142/351 (40%), Gaps = 37/351 (10%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           I FNTLI  + K  R      +   M LE    PN  T   LI   C+ G+L+T  +++ 
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           R+      P V+   +++  + +   +   +V    M ++ +  + + Y  +++A   + 
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490

Query: 143 NLESALVVYEEMLKRG-----------------------------------FSANSFVYT 167
           N+E A+  YE+ML+ G                                   FS +   Y 
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             IG +C+    E+   ++ +ME  G KP   T+N LI    K K  E      EQM   
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            L P+ + +  +I   C  G   +A  +   + L    +PN + Y+ LI  ++K G   +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            L L  EM+ K + P +  Y +L   L +  + E   K    M   S  P 
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 136/301 (45%), Gaps = 3/301 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++ TLIH        +     Y+ MLE    P+      LIS LC+  +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +++++     S  ++    LI     +   E+   +L  M ++    D+I Y+ 
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NA 192
           ++    K ++ ES   + E+M + G       Y   I AYC  G+++EA  L ++M  ++
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P    +N+LI   +K     ++LS  E+M  + + P+   +N + + L E    +  
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++   +++   PN+IT   L+   +   E+ ++ K  +   Y   SPT  A    + S
Sbjct: 707 LKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK--FMQGYSVASPTEKASPFDVFS 764

Query: 313 L 313
           L
Sbjct: 765 L 765


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 180/392 (45%), Gaps = 37/392 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  +S+ +++ LI    +  + +   R+ + ML     P   T  T++  LCK G++   
Sbjct: 267 GLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDA 326

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +LD +  K   P ++   +LI    +   I E  +L   +  +++    + Y+ ++  
Sbjct: 327 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDG 386

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++ +L+ A+ + +EM+K G   + F +TTF+  +C+ G +  A  L  EM N GL+P 
Sbjct: 387 LCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQP- 445

Query: 198 DE------------------------------------TFNLLIEGCAKAKRIEESLSYC 221
           D                                     T+N+ I+G  K   ++E+    
Sbjct: 446 DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELV 505

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M+   L+P    +  +I      G+ ++A  +    L KG  P+ +TY+ LI  YA  
Sbjct: 506 KKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVR 565

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G ++  +  ++EM  K + P +  Y +LI+ LC+  K+++A  +F  M++  + P    Y
Sbjct: 566 GRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTY 625

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+  +   G+  +AL L ++M+   ++P +
Sbjct: 626 TILINENCNLGHWQEALRLYKDMLDREIQPDS 657



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 156/347 (44%), Gaps = 1/347 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            L+S+NTLI+  T+       + ++  +      P+  T  TLI  LC+ G L   + + 
Sbjct: 341 DLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLK 400

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +      P V   T+ +    +   +     L   ML + +  D  AY   +  ++K+
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 460

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +   A  + EEML RGF  +   Y  FI    + G ++EA+ L+++M   GL P   T+
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I     A  + ++ +   +M+S+ + PS   +  +I      G  K A        +
Sbjct: 521 TSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI G  K  ++ +    + EM+ K ISP    YT LI+  C  G  +E
Sbjct: 581 KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQE 640

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           A + +K M    + P    + SL+  HL K  K   +   E +++ G
Sbjct: 641 ALRLYKDMLDREIQPDSCTHRSLLK-HLNKDYKLHVVRHLENVIAAG 686



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 166/397 (41%), Gaps = 39/397 (9%)

Query: 27  NTLIHVVTKSDRN-DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           N ++ ++   D N D+   +Y  M+E    P   T  T++ + CK G +Q  + +L ++ 
Sbjct: 170 NRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQ 229

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
              CSP  +    L+  +     +E+   L++ MLR  +      Y  ++    +   +E
Sbjct: 230 AMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIE 289

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP----YDE-- 199
            A  + EEML RG       Y T +   C++G++ +A  L+  M N  L P    Y+   
Sbjct: 290 EASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLI 349

Query: 200 -----------------------------TFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
                                        T+N LI+G  +   ++ ++   ++M+     
Sbjct: 350 YGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPD 409

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P    F   +R  C+ GN   A  +    L++G  P+   Y   I G  K G+  +   +
Sbjct: 410 PDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGM 469

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
             EM  +   P L  Y   I  L + G L+EA +  K M  + LVP    Y S++  HL 
Sbjct: 470 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 529

Query: 351 KGNKAKALHLCEEMVSEGLKPST---SYLCSASTCRG 384
            G+  KA  L  EM+S+G+ PS    + L  +   RG
Sbjct: 530 AGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRG 566



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 186/387 (48%), Gaps = 23/387 (5%)

Query: 6   VAFDVCRYLE-QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNE-ATIRT 63
           VA    R+ E Q GF  S IS++ ++ ++    RN L+   Y  M + +    E   I  
Sbjct: 63  VALRFFRWAERQTGFKRSEISYSVILDILA---RNGLMRSAYCVMEKVVSVKMENGVIDV 119

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRC---------SPMV-------IVNTSLILRIIQE- 106
           + S+      ++  +D+L  I+ K+            MV       + N + +LR++++ 
Sbjct: 120 VSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDR 179

Query: 107 -ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
              I+    +   M+   +    + Y+ ++ +  K   ++ AL +  +M   G S N   
Sbjct: 180 DNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVT 239

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   +      G++E+A  L+Q+M   GL+    T++ LI G  +  +IEE+    E+M+
Sbjct: 240 YNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEML 299

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           SR  +P+   +N ++  LC+ G    A  +L + ++K   P+ ++Y+ LI GY + G I 
Sbjct: 300 SRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 359

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E   L+ E+ Y+S++P++  Y +LI  LC+ G L+ A +    M  H   P V  + + V
Sbjct: 360 EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFV 419

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               + GN   A  L +EM++ GL+P 
Sbjct: 420 RGFCKMGNLPMAKELFDEMLNRGLQPD 446



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 6/317 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   L  R  + S++++NTLI  + +    D+  R+   M+++   P+  T  T + 
Sbjct: 361 AFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVR 420

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI---EEGMVLLKRMLRKN 123
             CK G L    ++ D +  +   P      + I RI+ E ++    +   + + ML + 
Sbjct: 421 GFCKMGNLPMAKELFDEMLNRGLQP---DRFAYITRIVGELKLGDPSKAFGMQEEMLARG 477

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++ +    K+ NL+ A  + ++ML  G   +   YT+ I A+   G + +A 
Sbjct: 478 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 537

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM + G+ P   T+ +LI   A   R++ ++ +  +M  + + P+   +N +I  L
Sbjct: 538 ALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 597

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     QA         KG SPN+ TY+ LI      G  QE L+LY +M  + I P  
Sbjct: 598 CKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDS 657

Query: 304 PAYTSLISSLCQCGKLE 320
             + SL+  L +  KL 
Sbjct: 658 CTHRSLLKHLNKDYKLH 674


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 177/367 (48%), Gaps = 8/367 (2%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           + G+ +  ++ N LI  +   +R +D +  +++ M E    P+  +   LI  LC   + 
Sbjct: 119 KTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKS 178

Query: 75  QTYVDMLDRIH-----GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           Q  +++L  IH     G  CSP V+   ++I    +E  +++   L   M+ + +  D +
Sbjct: 179 QEALELL--IHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVV 236

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++    K + ++ A+ + + M  +G   ++  Y   I  YC  G++EEA  L+++M
Sbjct: 237 TYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM 296

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
             +GL+P   T++LLI+   K  R  E+ S  + M+ +   P+ + ++ ++      G  
Sbjct: 297 SGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGAL 356

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
                +L L +  G       ++ LI  YAK G + + +  + EM    + P + +Y+++
Sbjct: 357 IDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTV 416

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+ G++E+A  +F  M S  L P +  + SL+      G   K   L  EM++ G+
Sbjct: 417 IHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGI 476

Query: 370 KPSTSYL 376
            P   ++
Sbjct: 477 HPDAIFM 483



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 163/354 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    ++++N+LI  + K+   D    I QHM +    P+  T   +I   C  GQL+ 
Sbjct: 229 QGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEE 288

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            V +L ++ G    P V+  + LI    +  R  E   +   M+RK    ++  Y ++++
Sbjct: 289 AVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLH 348

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  L     + + M++ G       +   I AY ++G +++A     EM   GL+P
Sbjct: 349 GYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRP 408

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              +++ +I    K  R+E+++ +  QM+S  L P+  +F  +I  LC  G  K+   + 
Sbjct: 409 DVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELA 468

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +++G  P+ I  + ++    KEG + E    +  + +  + P + +Y +LI   C  
Sbjct: 469 FEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFV 528

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           GK++E+ K    M S  L P    Y SL+  + + G    AL L  EM  + +K
Sbjct: 529 GKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVK 582



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 169/354 (47%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S +++S+NT+I    K    D  + ++  M+     P+  T  +LI  LCK   +   V 
Sbjct: 197 SPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVA 256

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +L  +  K   P       +I       ++EE + LLK+M    +  D + YSL++    
Sbjct: 257 ILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYC 316

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K+     A  V++ M+++G   NS +Y   +  Y   G + +   L+  M   G+     
Sbjct: 317 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 376

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            FN+LI   AK   ++++++   +M    L P   +++ +I  LC+ G  + A       
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           + +G SPN I+++ LI G    GE ++V +L +EM  + I P      +++ +LC+ G++
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            EA  +F ++    + P V  Y +L+  +   G   +++   + MVS GL+P +
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 161/347 (46%), Gaps = 6/347 (1%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D+   + + G      +FN LI    K    D     +  M +N   P+  +  T+I  L
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRKNMI 125
           CK G+++  V   +++  +  SP +I  TSLI     I + +++EE   L   M+ + + 
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE---LAFEMINRGIH 477

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I  + I+    K   +  A   ++ ++  G   +   Y T I  YC  GK++E+   
Sbjct: 478 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQ 537

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M + GL+P   T+N L+ G  K  R+E++L+   +M  + +       N M+  L +
Sbjct: 538 LDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQ 597

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G    A  +    +D+G      TY+ ++GG  +   + E L+++ ++  K     +  
Sbjct: 598 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRT 657

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           ++ +I++L + G+++EA   F  M     VP V  Y  ++  H+E+G
Sbjct: 658 FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEG 704



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 158/345 (45%), Gaps = 2/345 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           + Q G    ++S++T+IH++ K+ R  D V+   Q + E +  PN  +  +LI  LC  G
Sbjct: 401 MRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLS-PNIISFTSLIHGLCSIG 459

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           + +   ++   +  +   P  I   +++  + +E R+ E       ++   +  D ++Y+
Sbjct: 460 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYN 519

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++     +  ++ ++   + M+  G   +S+ Y + +  Y + G++E+A  L +EM   
Sbjct: 520 TLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRK 579

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            +K    T N+++ G  +A RI  +     +M+ R        +N ++  LCE     +A
Sbjct: 580 DVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEA 639

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             M      K F  +  T+S +I    K G I E   L+  M  +   P +  Y+ +I S
Sbjct: 640 LRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKS 699

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
             + G LEE+D  F  M+ +       +   +V   LEKG+  +A
Sbjct: 700 HIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/364 (21%), Positives = 153/364 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  + + +   G    +++++ LI    K  R      ++  M+   + PN      
Sbjct: 286 LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 345

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+      G L    D+LD +              LI    +   +++ M     M +  
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D ++YS +++   K   +E A+  + +M+  G S N   +T+ I   C  G+ ++  
Sbjct: 406 LRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVE 465

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM N G+ P     N +++   K  R+ E+  + + ++   + P   ++N +I   
Sbjct: 466 ELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGY 525

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   ++   L   +  G  P+  TY+ L+ GY K G +++ L LY EM  K +    
Sbjct: 526 CFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCA 585

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
                ++  L Q G++  A + +  M        ++ Y +++G   E     +AL + E+
Sbjct: 586 ITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFED 645

Query: 364 MVSE 367
           + S+
Sbjct: 646 LRSK 649



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 138/309 (44%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S ++ISF +LIH +        V  +   M+    +P+   + T++  LCK G++   
Sbjct: 440 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA 499

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D  D +      P V+   +LI       +++E +  L RM+   +  D+  Y+ ++  
Sbjct: 500 QDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNG 559

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E AL +Y EM ++     +      +    + G+I  A  L  +M + G +  
Sbjct: 560 YFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLR 619

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            ET+N ++ G  +   ++E+L   E + S++       F+ +I  L + G   +A  + +
Sbjct: 620 IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFS 679

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G  P+ ITYS +I  + +EG ++E   L+  ME    +        ++  L + G
Sbjct: 680 AMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKG 739

Query: 318 KLEEADKYF 326
            +  A  Y 
Sbjct: 740 DVRRAGTYL 748



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 11/247 (4%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A+ ++  M++ G +  + +    I  +C  G+++ A          G +  + T N LI+
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 207 GCAKAKRIEESLSYC-EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT-LALDKGF 264
           G     R ++++     +M      P   ++N +I+ LC    +++A  +L  +  D G+
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194

Query: 265 --SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
             SPN ++Y+ +I G+ KEGE+ +   L++EM  + + P +  Y SLI  LC+   +++A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-------SY 375
               + M    ++P    Y  ++  +   G   +A+ L ++M   GL+P          Y
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314

Query: 376 LCSASTC 382
            C    C
Sbjct: 315 YCKIGRC 321



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 137/332 (41%), Gaps = 40/332 (12%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF++      RG     I  NT++  + K  R       +  ++     P+  +  TL
Sbjct: 466 ELAFEMI----NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTL 521

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C  G++   +  LDR+      P      SL+    +  R+E+ + L + M RK++
Sbjct: 522 IDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDV 581

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               I  +++++   +   + +A  +Y +M+ RG       Y T +G  CE   ++EA  
Sbjct: 582 KFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 641

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS------------ 232
           + +++ +   +    TF+++I    K  RI+E+ S    M+ R  +P             
Sbjct: 642 MFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHI 701

Query: 233 -------------------CSA----FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
                              C+A     N ++RRL E G+ ++A   LT   +K FS    
Sbjct: 702 EEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEAS 761

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           T + LI     E + Q+ +K   E  +  + P
Sbjct: 762 TAALLI-PIVSEKKYQKEVKFLPEKYHSFMQP 792


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 2/303 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S ++FN LI+ + K      V ++  +M      PNE T  T+I+ LC  G+L   V +L
Sbjct: 257 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 316

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           DR+   +C P  +   +LI  ++++ R  +G+ LL  +  +    +  AYS ++    K 
Sbjct: 317 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 376

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E A+ ++++M+++G   N  VY+  I   C  GK++EA  ++ EM N G  P   T+
Sbjct: 377 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 436

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + LI+G  K    ++++   ++M     +P+   ++ +I  LCE G  ++A  M T  L 
Sbjct: 437 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 496

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM--EYKSISPTLPAYTSLISSLCQCGKL 319
           +G  P+ + YS +I G    G ++  LKL+ EM  +     P +  Y  L+ +LC+   +
Sbjct: 497 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 556

Query: 320 EEA 322
             A
Sbjct: 557 SHA 559



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 176/372 (47%), Gaps = 2/372 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A +V R +  +     + ++ TL+  + K DR D    +   M     +P+  T  
Sbjct: 203 LVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFN 262

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+ LCK G +     ++D +  K C P  +   ++I  +  + ++++ + LL RM+  
Sbjct: 263 VLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVAS 322

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + + + Y  ++   VK       + +   + +RG  AN + Y+T I    +  K EEA
Sbjct: 323 KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEA 382

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L ++M   G +P    ++ LI+G  +  +++E+     +M+++   P+   ++ +I+ 
Sbjct: 383 MGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKG 442

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + GN+++A  +          PNEI YS LI G  ++G+++E + ++  M  + + P 
Sbjct: 443 FFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPD 502

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM--KSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           + AY+S+I  LC  G +E   K F  M  +     P V  Y  L+    ++ + + A+ L
Sbjct: 503 VVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDL 562

Query: 361 CEEMVSEGLKPS 372
              M+  G  P 
Sbjct: 563 LNSMLDRGCNPD 574



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 167/352 (47%), Gaps = 4/352 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHML---ENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SFN++++V+ +          Y+  +    NI  PN  +   +I A+CK G +   +++ 
Sbjct: 153 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS-PNVLSFNLVIKAMCKLGLVDRAIEVF 211

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++C P V    +L+  + +E+RI+E ++LL  M  +     ++ +++++    K 
Sbjct: 212 REMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKK 271

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            ++     + + M  +G   N   Y T I   C  GK+++A  L+  M  +   P D T+
Sbjct: 272 GDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTY 331

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI G  K  R  + +     +  R    +  A++ +I  L +   +++A G+    ++
Sbjct: 332 GTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVE 391

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN + YS LI G  +EG++ E  ++  EM  K  +P    Y+SLI    + G  ++
Sbjct: 392 KGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQK 451

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A + +K M  ++ VP    Y  L+    E G   +A+ +   M+  GL+P  
Sbjct: 452 AIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV 503



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 171/386 (44%), Gaps = 38/386 (9%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F +LI     S     +++++  M    R   E     +  A  K    +  +++  R+
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 85  HGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRML--RKNMIHDTIAYSLIVYAKVKM 141
             + +C   V    S++  IIQE      +   +  +  + N+  + ++++L++ A  K+
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A+ V+ EM  +    + F Y T +   C+  +I+EA  L+ EM+  G  P   TF
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 202 NLLIEG-CAKAK----------------------------------RIEESLSYCEQMMS 226
           N+LI G C K                                    ++++++S  ++M++
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            K +P+   +  +I  L + G +     +L+   ++G   NE  YS LI G  KE + +E
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 381

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            + L+ +M  K   P +  Y++LI  LC+ GKL+EA +    M +    P    Y SL+ 
Sbjct: 382 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 441

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              + GN  KA+ + +EM      P+
Sbjct: 442 GFFKTGNSQKAIRVWKEMAKNNCVPN 467



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 23/320 (7%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ TLI+ + K  R+     +   + E   + NE    TLIS L K  + +  + +  +
Sbjct: 329 VTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 388

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C P ++V ++LI  + +E +++E   +L  M+ K    +   YS ++    K  N
Sbjct: 389 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 448

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            + A+ V++EM K     N   Y+  I   CE GK+ EA  +   M   GL+P    ++ 
Sbjct: 449 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 508

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKL--LPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           +I G   A  +E  L    +M+ ++    P    +N ++R LC+  +   A  +L   LD
Sbjct: 509 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568

Query: 262 KGFSPNEIT---------------------YSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +G +P+ IT                        L+    K   I    K+   M  K + 
Sbjct: 569 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 628

Query: 301 PTLPAYTSLISSLCQCGKLE 320
           P    +  +I  LC+  K++
Sbjct: 629 PNASTWERIIPELCKPKKVQ 648



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 33/168 (19%), Positives = 79/168 (47%), Gaps = 20/168 (11%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML--ENIRYPNEATIRTLISALCKGGQL 74
           RG    +++++++IH +  +   ++  +++  ML  E+   P+  T   L+ ALCK   +
Sbjct: 497 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 556

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE--RIEEGMVLLKRMLRKNMIHDTIAYS 132
              +D+L+ +  + C+P +I   ++ L  ++E+    ++G   L  ++ +  +H      
Sbjct: 557 SHAIDLLNSMLDRGCNPDLIT-CNIFLNALREKLNPPQDGREFLDELVVR--LH------ 607

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                  K + +  A  + E ML++    N+  +   I   C+  K++
Sbjct: 608 -------KRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 36/404 (8%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEA 59
           M   ++ F V     ++G   + + FNTL+  +   ++  D V    + + ENI  PNE 
Sbjct: 120 MHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEV 179

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
              T+++ LCK G  Q   D+L  +      P   + + +I    ++  ++    LL  M
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEM 239

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            +K++  D   YS ++ A  K+   E+   ++ EM+      N   + + I   C+ GK+
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 180 EEANCLMQEMENAGLKP------------------------YDE-----------TFNLL 204
           E+A  +M+ M   G+ P                        +D            ++N+L
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G A+ K+I+E++  C ++  + L PS    N ++  L E G  K A       L  G 
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  T+  L+GGY K G ++E +  ++++E +     +  YT++I  LC+ GKL++A  
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            F+ +    L P V  Y +++  + ++G   +A  +  +M   G
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 180/376 (47%), Gaps = 7/376 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLI 65
           AF + R + +     S++SF+ L+  +        V  +++  +  +R P +E  +  ++
Sbjct: 56  AFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFRE-IHKLRIPVHEFILSIVV 114

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPM--VIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++ C   +      +L  IH K+  P   VI NT L+  +  E ++++ + L K+++R+N
Sbjct: 115 NSCCLMHRTDLGFSVL-AIHFKKGIPFNQVIFNT-LLRGLFAENKVKDAVHLFKKLVREN 172

Query: 124 MIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           +   + + Y  ++    K  + + A  +   M +     N+ +Y+  I A+C+ G ++ A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+ EM+   + P   T++ LI+   K  + E   +   +M+   + P+   FN +I  
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G  + A  ++   ++KG  P+ ITY+ +I GY   G++    +++  M  KSI P 
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           + +Y  LI+   +  K++EA +  + +    L P +     L+    E G    A +  +
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 363 EMVSEGLKPSTSYLCS 378
           EM+S G  P     C+
Sbjct: 413 EMLSAGHIPDLYTHCT 428



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 150/357 (42%), Gaps = 37/357 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+ R +EQ     +   ++ +I    K    D    +   M +    P+  T  TLI 
Sbjct: 197 AFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256

Query: 67  ALCKGGQLQTYVDM-LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           ALCK  Q +    + L+ IH     P V    S+I  + +E ++E+   +++ M+ K + 
Sbjct: 257 ALCKLSQWENVRTLFLEMIH-LNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y++I+        ++ A  +++ M+ +    N   Y   I  Y    KI+EA  +
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQV 375

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-------------- 231
            +E+   GLKP   T N+L+ G  +  R + + ++ ++M+S   +P              
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFK 435

Query: 232 ------SCSAFNEMIRR---------------LCECGNAKQANGMLTLALDKGFSPNEIT 270
                 + S F+++ RR               LC+ G   +A+         G  P+ IT
Sbjct: 436 NGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVIT 495

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           Y+ +I GY +EG + E   +  +ME          Y  ++    +  K+ E   + +
Sbjct: 496 YTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLE 552



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 129/276 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN++I  + K  + +    I ++M+E    P+  T   +I      GQ+    ++ D +
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K   P +I    LI    ++++I+E M + + + +K +    +  +++++   ++   
Sbjct: 345 INKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           +SA   ++EML  G   + + + T +G Y + G +EEA     ++E        + +  +
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K  +++++ +  E++    L P    +  MI   C+ G   +A  ML    D G 
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             +  TY+ ++ G+ +  ++ E+     E+  KS S
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFS 560



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/261 (19%), Positives = 105/261 (40%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ RY+ ++G    +I++N +I       + D    I+  M+     PN  +   L
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+   +  ++   + +   I  K   P ++    L+  + +  R +        ML    
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I D   +  ++    K   +E A+  + ++ +R    N  +YT  I   C+ GK+++A+ 
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             +++   GL P   T+  +I G  +   ++E+     +M     L     +N ++R   
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFL 539

Query: 245 ECGNAKQANGMLTLALDKGFS 265
                 +    L     K FS
Sbjct: 540 RSNKVSEMKAFLEEIAGKSFS 560


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 170/365 (46%), Gaps = 4/365 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQT 76
           G  +  I+ NTL+  +  ++R +    +  H +  +   PN  +   ++ ALC     Q 
Sbjct: 187 GLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQR 246

Query: 77  YVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
            +D+L  +   G  CSP V+  +++I     E    +   L   M R+ +  D + Y+LI
Sbjct: 247 ALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           + A  K R ++ A +V  +M   G   ++  Y+  I  Y   G+++EA  + +EM+  GL
Sbjct: 307 IDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGL 366

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T N  +    K  R +E+  + + M ++   P   ++  ++      G      G
Sbjct: 367 IPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIG 426

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +       G + N   ++ LI  YAK G + + + ++ EM+ + +SP +  Y+++IS+  
Sbjct: 427 LFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFS 486

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL-KPST 373
           + G+L +A + F  M +  + P   +Y S++      G   KA  L  EM+++G+ +P  
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546

Query: 374 SYLCS 378
            +  S
Sbjct: 547 VFFSS 551



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 179/376 (47%), Gaps = 10/376 (2%)

Query: 10  VCRYLEQRGFSLSLISF---NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           VCR  E+ G  +++ +F   N L+    ++ R DL   ++  +L      ++ T  TL+ 
Sbjct: 143 VCR--EEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLK 200

Query: 67  ALCKGGQLQTYVD-MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-- 123
            LC   + +  V+ +L R+    C P   V+ S++L+ + +  + +  + L +M+ K   
Sbjct: 201 CLCYANRTEEAVNVLLHRMSELGCVPNA-VSYSIVLKALCDNSMSQRALDLLQMMAKQGG 259

Query: 124 -MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D +AYS +++          A  ++ EM ++G   +   Y   I A C+   +++A
Sbjct: 260 ACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKA 319

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++++M   G +P   T++ +I G A   R++E+     +M  R L+P+    N  +  
Sbjct: 320 ELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLAS 379

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G +K+A         KG  P+  +Y  L+ GYA EG   +++ L+  M+   I+  
Sbjct: 380 LCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAAN 439

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              +T LI +  + G +++A   F  M+   + P V  Y +++      G    A+    
Sbjct: 440 CHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFN 499

Query: 363 EMVSEGLKPSTSYLCS 378
           +MV+ G++P+T+   S
Sbjct: 500 QMVARGIQPNTAVYSS 515



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/361 (20%), Positives = 164/361 (45%), Gaps = 1/361 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G    ++++N +I  + K+   D    + + M  +   P+  T   +I      G+
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+    M   +  +   P ++   S +  + +  R +E       M  K    D  +Y  
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++           + ++  M   G +AN  V+T  I AY + G +++A  +  EM+  G
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ +I   ++  R+ +++    QM++R + P+ + ++ +I+  C  G   +A 
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAK 530

Query: 254 GMLTLALDKGFS-PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +++  ++KG   P+ + +S +I    K+G + +   ++         P +  + SLI  
Sbjct: 531 ELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDG 590

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  GK+++A K    M+   + P +  Y +L+  + + G     L L  EM  +G+KP+
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650

Query: 373 T 373
           T
Sbjct: 651 T 651



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/366 (20%), Positives = 162/366 (44%), Gaps = 1/366 (0%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +   G     ++++ +IH      R     ++++ M +    PN  T  + +++LC
Sbjct: 322 VLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLC 381

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G+ +   +  D +  K   P +    +L+     E    + + L   M    +  +  
Sbjct: 382 KHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCH 441

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            ++++++A  K   ++ A++++ EM ++G S +   Y+T I  +   G++ +A     +M
Sbjct: 442 VFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM 501

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL-LPSCSAFNEMIRRLCECGN 248
              G++P    ++ +I+G      + ++     +M+++ +  P    F+ +I  LC+ G 
Sbjct: 502 VARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A+ +  LA D G  P  IT++ LI GY   G++ +  K+   ME   + P +  Y +
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L+    + G++ +    F+ M+   + P    Y  ++      G    A     EM+  G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 369 LKPSTS 374
              + S
Sbjct: 682 TTVTVS 687



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 77/368 (20%), Positives = 161/368 (43%), Gaps = 9/368 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G + +   F  LIH   K    D    I+  M +    P+  T  T+IS   + G+
Sbjct: 431 MKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGR 490

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV----LLKRMLRKNMIH-DT 128
           L   ++  +++  +   P    NT++   IIQ   +  G+V    L+  M+ K +   D 
Sbjct: 491 LTDAMEKFNQMVARGIQP----NTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + +S ++ +  K   +  A  +++     G       + + I  YC  GK+++A  ++  
Sbjct: 547 VFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDA 606

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ME  G++P   T+N L++G  K  RI + L+   +M  + + P+   +  M+  L   G 
Sbjct: 607 MEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A       ++ G +     Y  ++GG  +     E + L+ ++   ++  ++    +
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+++ +  + EEA + F  + +  L+P    Y  ++   L+ G    A ++   M   G
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSG 786

Query: 369 LKPSTSYL 376
           + P +  L
Sbjct: 787 IVPGSRLL 794



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 128/299 (42%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           ++ F+++I+ + K  R      I+    +    P   T  +LI   C  G++     +LD
Sbjct: 546 IVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILD 605

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +      P ++   +L+    +  RI +G+ L + M RK +  +T+ Y +++    +  
Sbjct: 606 AMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
              +A   + EM++ G +    +Y   +G  C     +EA  L Q++    +K      N
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +I    K +R EE+      + +  LLP+ S +  MI  L + G  + AN M +     
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKS 785

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           G  P     + +I    ++GEI +      +++ K I       + ++S   + GK +E
Sbjct: 786 GIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQE 844


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 172/365 (47%), Gaps = 9/365 (2%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A+   R +E  GF + +I + T+++ + K+   +        +L+     +   + +L+
Sbjct: 178 LAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLL 237

Query: 66  SALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
              C+G  L+  + + D +  +  C+P  +  + LI  + +  R+EE   L  +M  K  
Sbjct: 238 LGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              T  Y++++ A      ++ A  +++EM+ RG   N   YT  I   C  GKIEEAN 
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANG 357

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + ++M   G+ P   T+N LI G  K  R+  +      M  R   P+   FNE++  LC
Sbjct: 358 VCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A  +L   LD G SP+ ++Y+ LI G  +EG +    KL   M    + P   
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCL 477

Query: 305 AYTSLISSLCQCGKLEEADKYFKIM--KSHSL--VPGVDIYESLVGIHLEKGNKAKALHL 360
            +T++I++ C+ GK + A  +  +M  K  SL  V G  + + +  +    G    AL +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNV----GKTRDALFI 533

Query: 361 CEEMV 365
            E +V
Sbjct: 534 LETLV 538



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 171/363 (47%), Gaps = 3/363 (0%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FD  R  E  GF L+   +++L+  + K D   L +  Y+ M  +         RT+++A
Sbjct: 147 FDELR--EVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNA 204

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM-IH 126
           LCK G  +     + +I          + TSL+L   +   + + + +   M R+     
Sbjct: 205 LCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAP 264

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           ++++YS++++   ++  LE A  + ++M ++G   ++  YT  I A C+ G I++A  L 
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G KP   T+ +LI+G  +  +IEE+   C +M+   + PS   +N +I   C+ 
Sbjct: 325 DEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKD 384

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +LT+   +   PN  T++ L+ G  + G+  + + L   M    +SP + +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI  LC+ G +  A K    M S  L P    + +++    ++G    A      M+ 
Sbjct: 445 NVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504

Query: 367 EGL 369
           +G+
Sbjct: 505 KGI 507



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 169/366 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + AF++   +  RG   ++ ++  LI  + +  + +    + + M+++  +P+  T  
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+  CK G++    ++L  +  + C P V     L+  + +  +  + + LLKRML  
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D ++Y++++    +  ++  A  +   M       +   +T  I A+C+ GK + A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           +  +  M   G+   + T   LI+G     +  ++L   E ++  ++L +  + N ++  
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM 555

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L +    K+   ML      G  P+ +TY+ L+ G  + G+I    ++   M+     P 
Sbjct: 556 LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPN 615

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT +I+ LCQ G++EEA+K    M+   + P    Y  +V  ++  G   +AL    
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675

Query: 363 EMVSEG 368
            MV  G
Sbjct: 676 AMVERG 681



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 157/353 (44%), Gaps = 6/353 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S++ LIH + +  R +  + +   M E    P+  T   LI ALC  G +    ++ D 
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  + C P V   T LI  + ++ +IEE   + ++M++  +    I Y+ ++    K   
Sbjct: 327 MIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGR 386

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A  +   M KR    N   +   +   C  GK  +A  L++ M + GL P   ++N+
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  +   +  +      M S  L P C  F  +I   C+ G A  A+  L L L KG
Sbjct: 447 LIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506

Query: 264 FSPNEITYSHLIGGYAKEGEIQE---VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            S +E+T + LI G    G+ ++   +L+   +M   +   +L     ++S  C   KL+
Sbjct: 507 ISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGC---KLK 563

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           E       +    LVP V  Y +LV   +  G+ + +  + E M   G  P+ 
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNV 616



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 168/377 (44%), Gaps = 4/377 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  VCR + + G   S+I++N LI+   K  R    + +   M +    PN  T   L
Sbjct: 353 EEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LC+ G+    V +L R+     SP ++    LI  + +E  +     LL  M   ++
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDL 472

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + ++ I+ A  K    + A      ML++G S +    TT I   C  GK  +A  
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALF 532

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ +    +     + N++++  +K  +++E L+   ++    L+PS   +  ++  L 
Sbjct: 533 ILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+   +  ML L    G  PN   Y+ +I G  + G ++E  KL   M+   +SP   
Sbjct: 593 RSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHL-EKGNKAKALHLCE 362
            YT ++      GKL+ A +  + M          IY SL+ G  L +KG +       +
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIK 712

Query: 363 EMVS--EGLKPSTSYLC 377
           E++S  E L  STS LC
Sbjct: 713 ELISVVEQLGGSTSGLC 729



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 3/229 (1%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A V Y  M   GF      Y T + A C+ G  E A   M ++   G          L+ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLL 238

Query: 207 GCAKAKRIEESLSYCEQMMSRK--LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           G  +   + ++L   + +MSR+    P+  +++ +I  LCE G  ++A G+     +KG 
Sbjct: 239 GFCRGLNLRDALKVFD-LMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  TY+ LI      G I +   L+ EM  +   P +  YT LI  LC+ GK+EEA+ 
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANG 357

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + M    + P V  Y +L+  + + G    A  L   M     KP+ 
Sbjct: 358 VCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/348 (19%), Positives = 142/348 (40%), Gaps = 80/348 (22%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++F  +I+   K  + D+       ML      +E T  TLI  +C  G+ +  + +L+ 
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILET 536

Query: 84  IHGKRCSPMVIVNTSL--ILRIIQEE-RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           +   R   M+    SL  IL ++ +  +++E + +L ++ +  ++   + Y+ +V   ++
Sbjct: 537 LVKMR---MLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             ++  +  + E M   G   N + YT  I   C++G++EEA  L+  M+++G+ P   T
Sbjct: 594 SGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSR----------KLL--------------PSC--- 233
           + ++++G     +++ +L     M+ R           LL              P C   
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKE 713

Query: 234 --SAFNEM-----------IRRLCECGNAKQANGM------------------------- 255
             S   ++           + RLC+ G   ++NG+                         
Sbjct: 714 LISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESYCSK 773

Query: 256 ---------LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
                    +TL L  GF P+  ++  +I G  KEG+ +   +L  E+
Sbjct: 774 KKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMEL 821


>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
 gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 45/362 (12%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-----YPNEATIRTLISALCKGG 72
           G   S+ SFNTL++ + ++ R DLV      M +N R      PN  T   L+ ALCK  
Sbjct: 200 GLQPSVRSFNTLLNTLVQNKRFDLV----HLMFKNCRKKFGIVPNVFTCNILVKALCK-- 253

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
                                            +  I+  + +L+ M     I + + Y+
Sbjct: 254 ---------------------------------KNDIDAAIRVLEEMPAMGFIPNVVTYT 280

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I+   V   ++  A  V+ E+L RG+  +   YT  +  YC+ G+  +A  +M EME  
Sbjct: 281 TILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEEN 340

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            ++P D T+ ++IE   K K+  E L+  + M+ +K +PS +    +I  LCE G  + A
Sbjct: 341 RVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVA 400

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +    L K  +P+    S LI    KEG++ E  KL+ E E  SI  TL  Y +LI+ 
Sbjct: 401 CELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTL-TYNALIAG 459

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +C+ G+L EA + +  M     VP    Y  L+    + GN  + + + EEM+  G  P+
Sbjct: 460 MCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519

Query: 373 TS 374
            +
Sbjct: 520 KA 521



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 129/269 (47%), Gaps = 3/269 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           + A  V   +   GF  +++++ T++   V+K D      R++  +L+    P+  T   
Sbjct: 258 DAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVG-ARRVFGEILDRGWVPDPTTYTI 316

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G+    V ++D +   R  P  +    +I    +E++  E + LL  ML K 
Sbjct: 317 LMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKK 376

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            I  +     ++    +   +E A  +++++LK+  + ++ + +T I   C+ GK+ EA 
Sbjct: 377 YIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEAR 436

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  E E   + P   T+N LI G  +   + E+    + M+ +  +P+   +N +I+  
Sbjct: 437 KLFDEFEKGSI-PSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGF 495

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYS 272
           C+ GNA++   ++   LD G  PN+ TY+
Sbjct: 496 CKVGNAREGIRVMEEMLDNGCLPNKATYA 524



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 133/312 (42%), Gaps = 37/312 (11%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+I      G+ +  +    RI      P V    +L+  ++Q +R +   ++ K   +K
Sbjct: 175 TVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKK 234

Query: 123 -NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ +    +++V A  K  ++++A+ V EEM   GF  N   YTT +G Y   G +  
Sbjct: 235 FGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVG 294

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  E+ + G  P   T+ +L++G  K  R  +++   ++M   ++            
Sbjct: 295 ARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRV------------ 342

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                                   PN++TY  +I  Y KE +  EVL L  +M  K   P
Sbjct: 343 -----------------------EPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIP 379

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           +      +I  LC+ GK+E A + +K +   +  P   I  +L+    ++G   +A  L 
Sbjct: 380 SSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF 439

Query: 362 EEMVSEGLKPST 373
           +E   +G  PST
Sbjct: 440 DEF-EKGSIPST 450



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 1/259 (0%)

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             +N  H+   Y  ++    K R  E    +  ++ K        ++ T I  Y   G+ 
Sbjct: 127 FHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRP 186

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE-ESLSYCEQMMSRKLLPSCSAFNE 238
           + A      + + GL+P   +FN L+    + KR +   L +        ++P+    N 
Sbjct: 187 KLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNI 246

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +++ LC+  +   A  +L      GF PN +TY+ ++GGY  +G++    +++ E+  + 
Sbjct: 247 LVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRG 306

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P    YT L+   C+ G+  +A K    M+ + + P    Y  ++  + ++    + L
Sbjct: 307 WVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVL 366

Query: 359 HLCEEMVSEGLKPSTSYLC 377
           +L ++M+ +   PS++  C
Sbjct: 367 NLLDDMLEKKYIPSSALCC 385


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 2/303 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S ++FN LI+ + K      V ++  +M      PNE T  T+I+ LC  G+L   V +L
Sbjct: 241 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 300

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           DR+   +C P  +   +LI  ++++ R  +G+ LL  +  +    +  AYS ++    K 
Sbjct: 301 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 360

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E A+ ++++M+++G   N  VY+  I   C  GK++EA  ++ EM N G  P   T+
Sbjct: 361 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 420

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + LI+G  K    ++++   ++M     +P+   ++ +I  LCE G  ++A  M T  L 
Sbjct: 421 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 480

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM--EYKSISPTLPAYTSLISSLCQCGKL 319
           +G  P+ + YS +I G    G ++  LKL+ EM  +     P +  Y  L+ +LC+   +
Sbjct: 481 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 540

Query: 320 EEA 322
             A
Sbjct: 541 SHA 543



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 176/372 (47%), Gaps = 2/372 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A +V R +  +     + ++ TL+  + K DR D    +   M     +P+  T  
Sbjct: 187 LVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFN 246

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+ LCK G +     ++D +  K C P  +   ++I  +  + ++++ + LL RM+  
Sbjct: 247 VLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVAS 306

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + + + Y  ++   VK       + +   + +RG  AN + Y+T I    +  K EEA
Sbjct: 307 KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEA 366

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L ++M   G +P    ++ LI+G  +  +++E+     +M+++   P+   ++ +I+ 
Sbjct: 367 MGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKG 426

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + GN+++A  +          PNEI YS LI G  ++G+++E + ++  M  + + P 
Sbjct: 427 FFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPD 486

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM--KSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           + AY+S+I  LC  G +E   K F  M  +     P V  Y  L+    ++ + + A+ L
Sbjct: 487 VVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDL 546

Query: 361 CEEMVSEGLKPS 372
              M+  G  P 
Sbjct: 547 LNSMLDRGCNPD 558



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 167/352 (47%), Gaps = 4/352 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHML---ENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SFN++++V+ +          Y+  +    NI  PN  +   +I A+CK G +   +++ 
Sbjct: 137 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS-PNVLSFNLVIKAMCKLGLVDRAIEVF 195

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++C P V    +L+  + +E+RI+E ++LL  M  +     ++ +++++    K 
Sbjct: 196 REMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKK 255

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            ++     + + M  +G   N   Y T I   C  GK+++A  L+  M  +   P D T+
Sbjct: 256 GDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTY 315

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI G  K  R  + +     +  R    +  A++ +I  L +   +++A G+    ++
Sbjct: 316 GTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVE 375

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN + YS LI G  +EG++ E  ++  EM  K  +P    Y+SLI    + G  ++
Sbjct: 376 KGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQK 435

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A + +K M  ++ VP    Y  L+    E G   +A+ +   M+  GL+P  
Sbjct: 436 AIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDV 487



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 171/386 (44%), Gaps = 38/386 (9%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F +LI     S     +++++  M    R   E     +  A  K    +  +++  R+
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 85  HGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRML--RKNMIHDTIAYSLIVYAKVKM 141
             + +C   V    S++  IIQE      +   +  +  + N+  + ++++L++ A  K+
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A+ V+ EM  +    + F Y T +   C+  +I+EA  L+ EM+  G  P   TF
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 202 NLLIEG-CAKAK----------------------------------RIEESLSYCEQMMS 226
           N+LI G C K                                    ++++++S  ++M++
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            K +P+   +  +I  L + G +     +L+   ++G   NE  YS LI G  KE + +E
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 365

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            + L+ +M  K   P +  Y++LI  LC+ GKL+EA +    M +    P    Y SL+ 
Sbjct: 366 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 425

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              + GN  KA+ + +EM      P+
Sbjct: 426 GFFKTGNSQKAIRVWKEMAKNNCVPN 451



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 23/320 (7%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ TLI+ + K  R+     +   + E   + NE    TLIS L K  + +  + +  +
Sbjct: 313 VTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 372

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C P ++V ++LI  + +E +++E   +L  M+ K    +   YS ++    K  N
Sbjct: 373 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 432

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            + A+ V++EM K     N   Y+  I   CE GK+ EA  +   M   GL+P    ++ 
Sbjct: 433 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 492

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKL--LPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           +I G   A  +E  L    +M+ ++    P    +N ++R LC+  +   A  +L   LD
Sbjct: 493 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 552

Query: 262 KGFSPNEIT---------------------YSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +G +P+ IT                        L+    K   I    K+   M  K + 
Sbjct: 553 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 612

Query: 301 PTLPAYTSLISSLCQCGKLE 320
           P    +  +I  LC+  K++
Sbjct: 613 PNASTWERIIPELCKPKKVQ 632



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 33/168 (19%), Positives = 79/168 (47%), Gaps = 20/168 (11%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML--ENIRYPNEATIRTLISALCKGGQL 74
           RG    +++++++IH +  +   ++  +++  ML  E+   P+  T   L+ ALCK   +
Sbjct: 481 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 540

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE--RIEEGMVLLKRMLRKNMIHDTIAYS 132
              +D+L+ +  + C+P +I   ++ L  ++E+    ++G   L  ++ +  +H      
Sbjct: 541 SHAIDLLNSMLDRGCNPDLIT-CNIFLNALREKLNPPQDGREFLDELVVR--LH------ 591

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                  K + +  A  + E ML++    N+  +   I   C+  K++
Sbjct: 592 -------KRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 166/356 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G SL L +FN L+ V+ K        ++   +++    PN  T    I  LC+ G+L   
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V M+  +  +   P VI   +LI  + +  + +E  V L +M+ + +  D+  Y+ ++  
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A  +  + +  GF  + F Y + I   C  G+   A  L  E    G+KP 
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N LI+G +    I E+     +M  + L+P    FN ++  LC+ G    A+G++ 
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + + KG+ P+  T++ LI GY+ + +++  L++   M    + P +  Y SL++ LC+  
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K E+  + +K M      P +  +  L+          +AL L EEM ++ + P  
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 162/360 (45%), Gaps = 3/360 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++NTLI    K     L  RI    + N   P++ T R+LI  LC  G+    + + +  
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
            GK   P VI+  +LI  +  +  I E   L   M  K +I +   ++++V    KM  +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  + + M+ +G+  + F +   I  Y    K+E A  ++  M + G+ P   T+N L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G  K  + E+ +   + M+ +   P+   FN ++  LC      +A G+L    +K  
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEME--YKSISPTLPAYTSLISSLCQCGKLEEA 322
           +P+ +T+  LI G+ K G++     L+ +ME  YK +S + P Y  +I +  +   +  A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK-VSSSTPTYNIIIHAFTEKLNVTMA 621

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
           +K F+ M    L P    Y  +V    + GN         EM+  G  PS + L     C
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 163/355 (45%), Gaps = 8/355 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++ S+N ++ V+  S   D   ++Y  M +    P+  +    + + CK  +    + +L
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  + C   V+   +++    +E    EG  L  +ML   +      ++ ++    K 
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA----NCLMQEMENAGLKPY 197
            +++    + ++++KRG   N F Y  FI   C+ G+++ A     CL+++    G KP 
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ----GPKPD 285

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI G  K  + +E+  Y  +M++  L P    +N +I   C+ G  + A  ++ 
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
            A+  GF P++ TY  LI G   EGE    L L+ E   K I P +  Y +LI  L   G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + EA +    M    L+P V  +  LV    + G  + A  L + M+S+G  P 
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 164/360 (45%), Gaps = 1/360 (0%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI-RYPNEATIRTLISALCKGGQ 73
           ++ GF  +L ++ ++I  +    + + +  +   M EN+  +  E      +    + G+
Sbjct: 32  KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGK 91

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q  V++ +R+    C P V    +++  ++     ++   +  RM  + +  D  ++++
Sbjct: 92  VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            + +  K     +AL +   M  +G   N   Y T +G + E     E   L  +M  +G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +     TFN L+    K   ++E     ++++ R +LP+   +N  I+ LC+ G    A 
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M+   +++G  P+ ITY++LI G  K  + QE      +M  + + P    Y +LI+  
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G ++ A++       +  VP    Y SL+     +G   +AL L  E + +G+KP+ 
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 118/255 (46%), Gaps = 1/255 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G+   + +FN LIH  +   + +    I   ML+N   P+  T  +L++ LCK  + + 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            ++    +  K C+P +     L+  + +  +++E + LL+ M  K++  D + +  ++ 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 137 AKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              K  +L+ A  ++ +M +    S+++  Y   I A+ E   +  A  L QEM +  L 
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ L+++G  K   +     +  +MM    +PS +    +I  LC      +A G+
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694

Query: 256 LTLALDKGFSPNEIT 270
           +   + KG  P  + 
Sbjct: 695 IHRMVQKGLVPEAVN 709



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/255 (20%), Positives = 112/255 (43%), Gaps = 7/255 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   +   G    + ++N+L++ + K+ + + V   Y+ M+E    PN  T   L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + +LC+  +L   + +L+ +  K  +P  +   +LI    +   ++    L ++M     
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597

Query: 125 I-HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +   T  Y++I++A  +  N+  A  +++EM+ R    + + Y   +  +C+ G +    
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             + EM   G  P   T   +I       R+ E+     +M+ + L+P      E +  +
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP------EAVNTI 711

Query: 244 CECGNAKQANGMLTL 258
           C+    + A   L L
Sbjct: 712 CDVDKKEVAAPKLVL 726


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 164/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + ++N +I    K +R +   ++   M      P+  T   +I +LC   +L   + +L
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVL 195

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D++    C P VI  T LI   I E  I E M LL+ ML + ++ D   Y+ I+    K 
Sbjct: 196 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 255

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +E A  +   +  +G   +   Y   + A+   GK +E   L+ EM + G +P   T+
Sbjct: 256 GMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 315

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++LI    +  RI+E++S  + M+ ++L P   +++ +I  LC+ G    A G++   + 
Sbjct: 316 SILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 375

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+ + Y+ ++    K G   + L+++ ++      P + +Y ++IS+L  CG    
Sbjct: 376 NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR 435

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A      M S  + P    Y SL+      G   +A+ L ++M   G +P+
Sbjct: 436 ALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 486



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 168/355 (47%), Gaps = 2/355 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I++  LI         +   ++ + ML     P+  T   +I  +CK G ++   +++
Sbjct: 206 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 265

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K C P VI    L+   + + + +EG  L+  M  +    + + YS+++ +  + 
Sbjct: 266 TSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 325

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A+ V + M+++  + +++ Y   I A C+ G+++ A  +M  M + G  P    +
Sbjct: 326 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 385

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N ++    K     ++L    ++      P+ S++N MI  L  CG+  +A GM+   + 
Sbjct: 386 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 445

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P+EITY+ LI    ++G ++E + L  +ME     PT+ +Y  ++  LC+  ++++
Sbjct: 446 KGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 505

Query: 322 ADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           A   F  M      P    Y  L+ GI    G + +A+ L   + S  +    S+
Sbjct: 506 AIGMFAEMIEKGCRPNETTYILLIEGIGF-AGWRTEAMELANSLFSRDVISQDSF 559



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 154/325 (47%)

Query: 48  HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE 107
            +LE+   P+      +IS  CK  +++    +L+R+  +   P ++    +I  +    
Sbjct: 127 EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           ++   + +L ++L  N +   I Y++++ A +    +  A+ + EEML RG   + + Y 
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I   C+ G +E A  L+  + + G KP   ++N+L+       + +E      +M SR
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
              P+   ++ +I  LC  G   +A  +L + ++K  +P+  +Y  LI    KEG +   
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           + +   M      P +  Y +++++LC+ G   +A + F  ++     P V  Y +++  
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPS 372
               G++++AL +   M+S+G+ P 
Sbjct: 427 LWSCGDRSRALGMVPAMISKGVDPD 451



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 171/374 (45%), Gaps = 3/374 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  V   ++ RGF   ++++N +I  +    +  L  ++   +L +   P   T   L
Sbjct: 154 EAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTIL 213

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A    G +   + +L+ +  +   P +    ++I  + +E  +E    L+  +  K  
Sbjct: 214 IEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGC 273

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I+Y++++ A +     +    +  EM  RG   N   Y+  I + C +G+I+EA  
Sbjct: 274 KPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 333

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ M    L P   +++ LI    K  R++ ++   + M+S   LP    +N ++  LC
Sbjct: 334 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 393

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + GNA QA  +       G  PN  +Y+ +I      G+    L +   M  K + P   
Sbjct: 394 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEI 453

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEE 363
            Y SLIS LC+ G +EEA      M+     P V  Y ++V + L K  +   A+ +  E
Sbjct: 454 TYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY-NIVLLGLCKVRRIDDAIGMFAE 512

Query: 364 MVSEGLKPS-TSYL 376
           M+ +G +P+ T+Y+
Sbjct: 513 MIEKGCRPNETTYI 526



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 36/309 (11%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  +  +  E +  L+ ++ K    D I  + ++      +N+E A  V E +L+  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESH 132

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN---------------- 202
              + F Y   I  +C+  +IE A  ++  M+  G  P   T+N                
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 203 -------------------LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
                              +LIE       I E++   E+M++R LLP    +N +IR +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  ++T    KG  P+ I+Y+ L+  +  +G+  E  KL  EM  +   P  
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LISSLC+ G+++EA    K+M    L P    Y+ L+    ++G    A+ + + 
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 364 MVSEGLKPS 372
           M+S G  P 
Sbjct: 373 MISNGCLPD 381



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 129/288 (44%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A ++   L  +G    +IS+N L+       + D   ++   M      PN+ T  
Sbjct: 257 MVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 316

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LIS+LC+ G++   + +L  +  K  +P       LI  + +E R++  + ++  M+  
Sbjct: 317 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 376

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + D + Y+ I+ A  K  N   AL ++ ++   G   N   Y T I A    G    A
Sbjct: 377 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 436

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++  M + G+ P + T+N LI    +   +EE++   + M      P+  ++N ++  
Sbjct: 437 LGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 496

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           LC+      A GM    ++KG  PNE TY  LI G    G   E ++L
Sbjct: 497 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 68/135 (50%), Gaps = 1/135 (0%)

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
           +++ R C+ G   ++   L   ++KG++P+ I  + LI G+     I++  ++   +E  
Sbjct: 73  KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH 132

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           +  P + AY ++IS  C+  ++E A +    MK+   +P +  Y  ++G    +     A
Sbjct: 133 T-EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 191

Query: 358 LHLCEEMVSEGLKPS 372
           L + ++++ +   P+
Sbjct: 192 LKVLDQLLLDNCMPT 206


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 174/358 (48%), Gaps = 4/358 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G+     +FN+LI    ++++ D+   ++  M       +  +  TLI  LC+ G++ 
Sbjct: 3   RSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRID 62

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V++     G+   P + +  +L+  +   ER EEG+++L+RM        T AY+ +V
Sbjct: 63  EAVELF----GEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVV 118

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
             + + R  + A  + +EM ++G +      T  I AYC+ G++ +A  +++ M+  G K
Sbjct: 119 DFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 178

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N L++G     ++ ++++   +M +  + P    +N +IR  C  G+ + A  +
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 238

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L L    G   ++ TY+ LI    K+G   +   L+  +E + I P    + SLI+ LC+
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK + A K+ + M S    P    Y S +    +     + L    EM+ + +KPST
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 172/371 (46%), Gaps = 17/371 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF + R +E  G      ++N LI+ + K  R D    ++  +      PN  T  +
Sbjct: 232 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 291

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LCK G+       L+++    C+P     +S I  + + +  +EG+  +  ML+K+
Sbjct: 292 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 351

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +   T+ Y+++++  +K RN       + EM+  G + +   YTT + AYC  G++ EA 
Sbjct: 352 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 411

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR-- 241
            ++ EM   G+      +N L++G A   + + ++S  +QM S   +P+   +  ++R  
Sbjct: 412 NVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 471

Query: 242 ---RLCE-------CGNAKQAN-----GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
              RL E        G  K        G+  +     F PN  TYS ++ G++++G  +E
Sbjct: 472 VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 531

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L   M+  SIS     YT+L++  C+  +  +A      M  H  +P +  Y+ L+ 
Sbjct: 532 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLS 591

Query: 347 IHLEKGNKAKA 357
             + +G   KA
Sbjct: 592 GLICEGQTDKA 602



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 163/361 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +++ G+  S  ++  ++    +  +      + Q M E    P   T   +I+A CK 
Sbjct: 100 RRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 159

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++   + +L+ +  + C P V    +L+     E ++ + M LL +M    +  D + Y
Sbjct: 160 GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTY 219

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           +L++  +    ++ESA  +   M   G  A+ + Y   I A C+ G+ ++A  L   +E 
Sbjct: 220 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 279

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+KP   TFN LI G  K+ + + +  + E+M+S    P    ++  I  LC+   +++
Sbjct: 280 RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 339

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
               +   L K   P+ + Y+ +I    KE     V + + EM     +P +  YT+ + 
Sbjct: 340 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 399

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           + C  G+L EA+     M  + +      Y +L+  H   G    A+ + ++M S    P
Sbjct: 400 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 459

Query: 372 S 372
           +
Sbjct: 460 N 460



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 155/368 (42%), Gaps = 4/368 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA D+   +  RGF+  ++S+ TLI  + ++ R D    ++  M +    P+      L
Sbjct: 27  DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAAL 82

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LC   + +  + ML R+      P      +++    +E + +E   +L+ M  K +
Sbjct: 83  VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 142

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               +  + ++ A  K   +  AL V E M  RG   N + Y   +  +C  GK+ +A  
Sbjct: 143 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 202

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ +M   G+ P   T+NLLI G      IE +      M    L+     +N +I  LC
Sbjct: 203 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 262

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   QA  +      +G  PN +T++ LI G  K G+     K   +M     +P   
Sbjct: 263 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 322

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+S I  LC+    +E   +   M    + P    Y  ++   L++ N         EM
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382

Query: 365 VSEGLKPS 372
           VS G  P 
Sbjct: 383 VSSGCNPD 390



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 4/251 (1%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+R     D   ++ ++    +   ++ A  ++++M  RGF+ +   Y T I   CE G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           I+EA  L  EM+    +P    +  L++G   A+R EE L    +M      PS  A+  
Sbjct: 61  IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++   C    AK+A  ML    +KG +P  +T + +I  Y KEG + + L++   M+ + 
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P +  Y +L+   C  GK+ +A      M++  + P    Y  L+      G+   A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 359 HLCEEMVSEGL 369
            L   M  +GL
Sbjct: 237 RLLRLMEGDGL 247



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/387 (20%), Positives = 146/387 (37%), Gaps = 87/387 (22%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK--- 70
           LE RG   + ++FN+LI+ + KS + D+ W+  + M+     P+  T  + I  LCK   
Sbjct: 277 LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 336

Query: 71  --------GGQLQTYVD--------------------MLDRIHGKR----CSPMVIVNTS 98
                   G  LQ  V                     ++ R  G+     C+P V+  T+
Sbjct: 337 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTT 396

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK-------------------- 138
            +     E R+ E   +L  M +  +  DT+AY+ ++                       
Sbjct: 397 SMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVA 456

Query: 139 ---------------VKMRNLESALVV-----------------YEEMLKRGFSANSFVY 166
                          V+MR +E  L +                 ++ M K  F  NS  Y
Sbjct: 457 SVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 516

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           ++ +  + E G+ EEA  L+  M+   +   ++ +  L+    K+KR  ++      M+ 
Sbjct: 517 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 576

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
              +P   ++  ++  L   G   +A  +   +  K +SP+EI +  +I G  K+G    
Sbjct: 577 HGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDI 636

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSL 313
             ++   +E  +  P+   Y  L   L
Sbjct: 637 SREMIIMLERMNCRPSHQTYAMLTEEL 663


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 178/372 (47%), Gaps = 2/372 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A  V R +  R     + ++ TL+  + K+DR D    +   M  +  +P+  T  
Sbjct: 214 LVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFN 273

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+ LCK G L     ++D +  K C P  +   +LI  +  + ++E+ + LL RM+  
Sbjct: 274 VLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSS 333

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + + + Y  I+   VK         V   M +RG+  N +VY+T I    + GK +EA
Sbjct: 334 KCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEA 393

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM   G +     ++ +I+G  +  + ++++    +M ++   P+    + +++ 
Sbjct: 394 MHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKG 453

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             E GN+ +A  +        F+ NE+ YS LI G  K+G+++E + ++ +M  K   P 
Sbjct: 454 FFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPD 513

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM--KSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           + AY+S+I+ L   G +E+A + +  M  +     P V  Y  L+    ++ + ++A+ L
Sbjct: 514 VVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDL 573

Query: 361 CEEMVSEGLKPS 372
              M+  G  P 
Sbjct: 574 LNSMLDRGCDPD 585



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 3/352 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY---PNEATIRTLISALCKGGQLQTYVDML 81
           SFN++++V+ +          Y H++        PN  T   +I A+CK G +   + + 
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++C P V    +L+  + + +RI+E + LL  M         + +++++    K 
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L  A  + + M  +G   N   Y T I   C  GK+E+A  L+  M ++   P   T+
Sbjct: 283 GDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 342

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I G  K  R  +       M  R    +   ++ +I  L + G +++A  +      
Sbjct: 343 GTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTV 402

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG+  N I YS +I G  ++G+  + +++  EM  K  +P     +SL+    + G    
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHR 462

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A + +K M  H+       Y  L+    + G   +A+ +  +M+ +G KP  
Sbjct: 463 AVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDV 514



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 145/326 (44%), Gaps = 39/326 (11%)

Query: 78  VDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH---DTIAYSL 133
           VD+ DR+  +  C        S++  IIQE      +     ++    +    + + ++L
Sbjct: 145 VDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNL 204

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K+  ++ A+ V+ +M  R    + + Y T +   C+  +I+EA  L+ EM+  G
Sbjct: 205 VIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG 264

Query: 194 LKPYDETFNLLIEG-CAKAK----------------------------------RIEESL 218
             P   TFN+LI G C K                                    ++E+++
Sbjct: 265 CFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAI 324

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S  ++M+S K +P+   +  +I  L + G A     +L L  ++G+  NE  YS LI G 
Sbjct: 325 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGL 384

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+ QE + L+ EM  K        Y+++I  LC+ GK ++A +    M +    P  
Sbjct: 385 FKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNA 444

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEM 364
               SL+    E GN  +A+ + ++M
Sbjct: 445 YTCSSLMKGFFEAGNSHRAVEVWKDM 470



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 72/321 (22%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S ++FN LI+ + K        ++  +M      PNE T  TLI  LC  G+L+  + +L
Sbjct: 268 SPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLL 327

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           DR+   +C P V+   ++I  ++++ R  +G  +L  M  +    +   YS ++    K 
Sbjct: 328 DRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKE 387

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET- 200
              + A+ +++EM  +G+  N+ VY+  I   C  GK ++A  ++ EM N G  P   T 
Sbjct: 388 GKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTC 447

Query: 201 ----------------------------------FNLLIEGCAKAKRIEESLSYCEQMMS 226
                                             +++LI G  K  +++E++    QM+ 
Sbjct: 448 SSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLG 507

Query: 227 RKLLPSCSAFNEMIR-------------------------------------RLCECGNA 249
           +   P   A++ MI                                       LC+  + 
Sbjct: 508 KGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSI 567

Query: 250 KQANGMLTLALDKGFSPNEIT 270
            +A  +L   LD+G  P+ +T
Sbjct: 568 SRAIDLLNSMLDRGCDPDLVT 588


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 180/401 (44%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F V   + +RG+    ++ NTLI  +    +       +  +L      N+ +  TLI+
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +CK G  +  +  L +I G+   P V++  ++I  + + + + E   L   M  K +  
Sbjct: 173 GVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISA 232

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++Y    +  L+ A+ +  EM+ +  + N + Y   + A C+ GK++EA  ++
Sbjct: 233 DVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292

Query: 187 QEMENA-----------------------------------GLKPYDETFNLLIEGCAKA 211
             M  A                                   G+ P   T+ +LI G  K 
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           K ++E+L+  ++M  + ++P    ++ +I  LC+ G       ++    D+G   + ITY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITY 412

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           S LI G  K G +   + L+ +M+ + I P +  +T L+  LC+ G+L++A + F+ + +
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLT 472

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 V  Y  ++  H ++G   +AL +  +M   G  P+
Sbjct: 473 KGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 152/313 (48%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T+  LI+  C  GQ+     +L +I  +   P  +   +LI  +  + ++++ +  
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             ++L +    + ++Y+ ++    K+ +  +A+    ++  R    +  +Y T I A C+
Sbjct: 152 HDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCK 211

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           Y  + EA  L  EM   G+     T+N LI G     +++E++    +M+ + + P+   
Sbjct: 212 YQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYT 271

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC+ G  K+A  +L + L     P+ ITYS L+ GY    E+++   ++  M 
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              ++P +  YT LI+  C+   ++EA   FK M   ++VPG+  Y SL+    + G  +
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391

Query: 356 KALHLCEEMVSEG 368
               L +EM   G
Sbjct: 392 YVWDLIDEMRDRG 404



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 165/363 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    R ++ R     ++ +NT+I  + K       + ++  M       +  T  TLI 
Sbjct: 183 AIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIY 242

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+L+  + +L+ +  K  +P V     L+  + +E +++E   +L  ML+  +  
Sbjct: 243 GFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS ++     +  ++ A  V+  M   G + +   YT  I  +C+   ++EA  L 
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   T++ LI+G  K+ RI       ++M  R        ++ +I  LC+ 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +     D+   PN  T++ L+ G  K G +++  +++ ++  K     +  Y
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I+  C+ G LEEA      M+ +  +P    +E+++    +K    KA  L  +M++
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIA 542

Query: 367 EGL 369
            GL
Sbjct: 543 RGL 545



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 133/296 (44%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V   +R+   R +P +I    ++    + +     + L  R+  K +  D I  ++++  
Sbjct: 44  VSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINC 103

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              M  +     V  ++LKRG+  ++    T I   C  G++++A     ++   G +  
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++  LI G  K      ++ +  ++  R   P    +N +I  +C+     +A G+ +
Sbjct: 164 QVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFS 223

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG S + +TY+ LI G+   G+++E + L  EM  K+I+P +  Y  L+ +LC+ G
Sbjct: 224 EMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K++EA     +M    + P V  Y +L+  +       KA H+   M   G+ P  
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 119/267 (44%)

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           + +++ +    RML        I ++ I+ +  KM++  +A+ +   +  +G   +    
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              I  +C  G+I     ++ ++   G  P   T N LI+G     +++++L + +++++
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           +    +  ++  +I  +C+ G+ + A   L     +   P+ + Y+ +I    K   + E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L+ EM  K IS  +  Y +LI   C  GKL+EA      M   ++ P V  Y  LV 
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
              ++G   +A  +   M+   +KP  
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDV 304



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 103/233 (44%)

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           ++N++ A+  +  ML    +     +   + ++ +      A  L   +E  G++P   T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N+LI       +I    S   +++ R   P     N +I+ LC  G  K+A       L
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +GF  N+++Y+ LI G  K G+ +  +K   +++ +   P +  Y ++I ++C+   + 
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS 216

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA   F  M    +   V  Y +L+      G   +A+ L  EMV + + P+ 
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNV 269


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 143/274 (52%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
             ++ + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K +R++ ++
Sbjct: 202 VQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    EKG+    L L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPS 415



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +        V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +  ++++   L   ML   ++ + + ++ ++    K R ++ A+ +Y++ML +  S + 
Sbjct: 217 CKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + ++G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +   LKL  EM+     P++
Sbjct: 397 VWTGLKLLKEMQRDGYMPSV 416



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 110/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  +      ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K   +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD       R    S++SFNTL++   K    D  +R+   M  +    +  T
Sbjct: 152 IRLAQSVFDAITKWSLRP---SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              CE G+      +L      G+ P+ +T
Sbjct: 389 NEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 117/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLIKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +          P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   +   +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H +   
Sbjct: 197 MQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDVAMEIYKQMLSQSLSPD 275


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 163/352 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + +FN L+H + K        R++  +L+    PN  T    I  LCK G L   V +L
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +   P V+   ++I  + ++ R+ E    L +M+      +   Y+ I+    K 
Sbjct: 354 GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKK 413

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A  + ++ + +GF  + F Y + +  +C+ G  ++A  + ++    GL+P    +
Sbjct: 414 GMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVY 473

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G  +   I  +L    +M  +   P    +N +I  LC+ G    AN ++  A+ 
Sbjct: 474 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 533

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P+  TY+ L+ GY ++ ++   ++L   M  + ++P +  Y +L++ LC+  K EE
Sbjct: 534 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 593

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + FK M      P +  Y +++          +A+ L  EM S+GL P  
Sbjct: 594 VMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDV 645



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 161/361 (44%), Gaps = 1/361 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G    ++++NT+I  + +  R          M+     PN+ T  ++I   CK G 
Sbjct: 356 VSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGM 415

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L     K   P      SL+    Q+   ++ M + K  L K +    I Y+ 
Sbjct: 416 VVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNT 475

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +   +  AL +  EM ++G   + + Y   I   C+ G + +AN L+ +    G
Sbjct: 476 LIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N L++G  +  +++ ++    +M S+ + P    +N ++  LC+   +++  
Sbjct: 536 CIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVM 595

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     +KG +PN ITY+ +I       ++ E + L  EM+ K ++P + ++ +LI+  
Sbjct: 596 EIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGF 655

Query: 314 CQCGKLEEADKYFKIM-KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G L+ A   F+ M K + +      Y  ++    E+ N   AL L  EM   G  P 
Sbjct: 656 CKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPD 715

Query: 373 T 373
            
Sbjct: 716 N 716



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 162/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+ S+N +++++ +    +   ++Y  M +     +  T    I + C+ G+    + +L
Sbjct: 189 SVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLL 248

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +    C    +   +++    +    +    L   ML   +  D   ++ +V+A  K 
Sbjct: 249 RNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKK 308

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  +  +++++LKRG   N F +  FI   C+ G ++ A  L+  +   GL+P   T+
Sbjct: 309 GFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTY 368

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I G  +  R+ E+     +M++    P+   +N +I   C+ G    AN +L  A+ 
Sbjct: 369 NTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVF 428

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KGF P+E TY  L+ G+ ++G+  + + ++ +   K + P++  Y +LI  LCQ G +  
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 488

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +    M      P +  Y  ++    + G  + A HL  + +++G  P 
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 147/350 (42%), Gaps = 35/350 (10%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ T++    +   ND    ++  MLE    P+  T   L+ ALCK G           
Sbjct: 261 VAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKG----------- 309

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
                              +++ ER      L  ++L++ +  +   +++ +    K  +
Sbjct: 310 ------------------FVLESER------LFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ +   + + G   +   Y T I   C   ++ EA   + +M N G +P D T+N 
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G  K   + ++    +  + +   P    +  ++   C+ G+  QA  +    L KG
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ I Y+ LI G  ++G I   L+L  EM  K   P +  Y  +I+ LC+ G L +A+
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDAN 525

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                  +   +P +  Y +LV  +  +     A+ L   M S+G+ P  
Sbjct: 526 HLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDV 575



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 1/321 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   S+I +NTLI  + +        ++   M E    P+  T   +I+ LCK G L  
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++     K C P +    +L+    ++ +++  + L+ RM  + M  D I Y+ ++ 
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K    E  + +++ M ++G + N   Y T I + C   K+ EA  L+ EM++ GL P
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTP 643

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA-FNEMIRRLCECGNAKQANGM 255
              +F  LI G  K   ++ +      M  +  +   +A +N +I    E  N K A  +
Sbjct: 644 DVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRL 703

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            +     G  P+  TY  LI G+ K G + +  K   E   K   P+L  +  +++ LC 
Sbjct: 704 FSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCV 763

Query: 316 CGKLEEADKYFKIMKSHSLVP 336
             K++EA     +M    +VP
Sbjct: 764 EHKVQEAVGIIHLMVQKDIVP 784



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/359 (20%), Positives = 156/359 (43%), Gaps = 3/359 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF     ++ +L++   +    D    +++  L     P+     TLI  LC+ G +  
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 488

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +++ +  K C P +     +I  + +   + +   L+   + K  I D   Y+ +V 
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 548

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +   L+SA+ +   M  +G + +   Y T +   C+  K EE   + + M   G  P
Sbjct: 549 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N +IE    +K++ E++    +M S+ L P   +F  +I   C+ G+   A G+ 
Sbjct: 609 NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLF 668

Query: 257 TLALDKGF--SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
              ++K +  S    TY+ +I  ++++  ++  L+L+ EM+     P    Y  LI   C
Sbjct: 669 R-GMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFC 727

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + G + +  K+         +P +  +  ++     +    +A+ +   MV + + P T
Sbjct: 728 KTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 143/338 (42%), Gaps = 35/338 (10%)

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G++Q  VD  +R+    C P V    +++  +++     +   +  RM  K +  D  
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y++ + +  +     +AL +   M   G  +N+  Y T +  + E+G  + A  L  EM
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
               L P   TFN L+    K   + ES    ++++ R + P+   FN  I+ LC+ G+ 
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 250 KQANGMLTLA-----------------------------------LDKGFSPNEITYSHL 274
            +A  +L                                      ++ GF PN+ TY+ +
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I GY K+G + +  ++  +  +K   P    Y SL++  CQ G  ++A   FK      L
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            P + +Y +L+    ++G    AL L  EM  +G KP 
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD 504



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 119/255 (46%), Gaps = 1/255 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    + ++NTL+    +  + D    +   M      P+  T  TL++ LCK  + + 
Sbjct: 534 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 593

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +++   +  K C+P +I   ++I  +   +++ E + LL  M  K +  D +++  ++ 
Sbjct: 594 VMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 653

Query: 137 AKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              K+ +L+ A  ++  M K+   S  +  Y   I A+ E   ++ A  L  EM+  G  
Sbjct: 654 GFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCD 713

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P + T+ +LI+G  K   + +   +  + + +  +PS + F  ++  LC     ++A G+
Sbjct: 714 PDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGI 773

Query: 256 LTLALDKGFSPNEIT 270
           + L + K   P+ + 
Sbjct: 774 IHLMVQKDIVPDTVN 788



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 114/230 (49%), Gaps = 1/230 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A ++   +  +G +  +I++NTL++ + K+ +++ V  I++ M E    PN  T  T
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK- 122
           +I +LC   ++   VD+L  +  K  +P V+   +LI    +   ++    L + M ++ 
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           ++ H T  Y++I+ A  +  N++ AL ++ EM K G   +++ Y   I  +C+ G + + 
Sbjct: 676 DVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQG 735

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
              + E    G  P   TF  ++       +++E++     M+ + ++P 
Sbjct: 736 YKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 123/274 (44%)

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           ++ +I+E +   +RM   N      +Y+ I+   V+      A  VY  M  +   ++ +
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            YT  I ++C  G+   A  L++ M   G       +  ++ G  +    + +    ++M
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +   L P  + FN+++  LC+ G   ++  +    L +G  PN  T++  I G  KEG +
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
              ++L   +  + + P +  Y ++I  LC+  ++ EA++    M +    P    Y S+
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           +  + +KG    A  + ++ V +G KP     CS
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCS 440



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 20/254 (7%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +    + Y  V +RNL+       +  K+GF    F Y + +     +GK  E   L+
Sbjct: 88  DLVDVFCMKYEDVCIRNLQLI-----KKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLL 142

Query: 187 QEMENAGLKPYDETFNLLIEGC--------AKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
            EM +          N L+EG          +  +I+E++   E+M      PS  ++N 
Sbjct: 143 SEMRS-------NLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNA 195

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++  L E G   QA+ +     DK    +  TY+  I  + + G     L+L   M    
Sbjct: 196 IMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLG 255

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
                 AY ++++   + G  + A + F  M    L P V  +  LV    +KG   ++ 
Sbjct: 256 CFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESE 315

Query: 359 HLCEEMVSEGLKPS 372
            L ++++  G+ P+
Sbjct: 316 RLFDKVLKRGVCPN 329



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/209 (19%), Positives = 88/209 (42%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           VY   +  Y   GKI+EA    + M+     P   ++N ++    +     ++     +M
Sbjct: 157 VYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM 216

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
             +K+      +   I+  C  G    A  +L      G   N + Y  ++ G+ + G+ 
Sbjct: 217 KDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDN 276

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
               +L+ EM    + P +  +  L+ +LC+ G + E+++ F  +    + P +  +   
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +    ++G+  +A+ L   +  EGL+P  
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDV 365


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 167/371 (45%), Gaps = 2/371 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q  ++   +S+N L+ V+ KS R D V+  Y  ML     PN  T   L+ +LC+  + +
Sbjct: 10  QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFE 69

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +   +  + CSP V   + LI  + + ++++E   LL  M+      + + Y  ++
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               KM  L+ A+ ++  M+ RG   +  VY   I  + + G + EA  L +EM   G  
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N L+ G ++        S  + M+ +  +P+   FN ++   C+ G+  +A+ +
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G  P+ ++Y+ LI G   +G+  E  +L  EM    + P + +Y  LI    +
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            G L+ A K F  +    L P    Y +++      G    A  + ++M++ G  P  + 
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 376 LCS--ASTCRG 384
           +       CRG
Sbjct: 370 VIPLVIGLCRG 380



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 38/352 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  V R +  +G S ++ S++ LI  + +  + D    +   M++    PN  T  +
Sbjct: 68  FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+S LCK G+L+  VD+  R+  + C P  +V   LI    ++  + E   L + ML K 
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            I     Y+ ++    +         ++++ML++G   N F +   +  +C+ G + EA+
Sbjct: 188 CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 184 CLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            L  EM + G  P   ++N LI G C+K K  E          +++LL       EMIR 
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE----------AQRLL------REMIR- 290

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
                               G  P+ ++Y+ LI GY+K G +   +KL+YE+    + P 
Sbjct: 291 -------------------SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             +Y+++I  LC+ GK+  A   FK M ++   P   +   LV I L +G +
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLV-IGLCRGER 382



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 117/252 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   ++ ++N+L+   ++      V  +++ ML     PN  T   L+   CK G + 
Sbjct: 185 EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMV 244

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +   +    C P V+   +LI  +  + +  E   LL+ M+R  +  D ++Y++++
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   L+ A+ ++ E+ K G   ++F Y+T I   C  GK+  A  + ++M   G  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P       L+ G  + +R+ ES    + M+  + +P    +N ++ +LC+   +     +
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEI 424

Query: 256 LTLALDKGFSPN 267
                ++GFSP+
Sbjct: 425 FHELTERGFSPD 436


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 153/330 (46%), Gaps = 35/330 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG   +++SFNTLI+   KS   D  +R+ + M+EN  +P+  T   LI+ LCK GQ  
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ-- 310

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                                            +++   L   M  + ++ + + ++ ++
Sbjct: 311 ---------------------------------LDDANKLFLEMCDRGLVPNDVTFTTLI 337

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                    +  + +Y++ML++G   +   Y T I   C+ G + EA  L+ EM   GLK
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ +LI+GC K   +E +L   ++M+   +     AF  +I   C  G   +A   
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERT 457

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   L+ G  P++ TY+ +I G+ K+G+++   KL  EM+     P +  Y  L++ LC+
Sbjct: 458 LREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCK 517

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            G+++ A+     M +  +VP    Y  L+
Sbjct: 518 QGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 158/369 (42%), Gaps = 15/369 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++ F  C YL  R   L+L S                 W  Y+ +L+    P+      
Sbjct: 186 LQIPFHSCGYLFDRLMKLNLTS---------------PAWAFYEEILDCGYPPDVCKFNV 230

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LCK  ++     +   I  +   P V+   +LI    +   +++G  L + M+   
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS+++    K   L+ A  ++ EM  RG   N   +TT I  +C  G+ +   
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM 350

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + Q+M   G+KP   T+N LI G  K   + E+     +M  R L P    +  +I   
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ + A  +    + +G   + + ++ LI G+ +EG++ E  +   EM    I P  
Sbjct: 411 CKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT +I   C+ G ++   K  K M+    VPGV  Y  L+    ++G    A  L + 
Sbjct: 471 ATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA 530

Query: 364 MVSEGLKPS 372
           M++ G+ P 
Sbjct: 531 MLNLGVVPD 539


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 163/351 (46%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S ++  +N LI  + K  +     +++  ML     P+  T  TLI   CK G  +    
Sbjct: 584 SPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFK 643

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           + +R+      P +I   +L+  + +   +E+   +L  M  +  + D   +S++     
Sbjct: 644 VRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYS 703

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
                ++AL VYE  +  G   N++  +  + A C+ G+IE+A  ++      GL P + 
Sbjct: 704 SNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEV 763

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            +N +I+G ++   +  +    + M  + + P   A+N +IR  CE G+ + A   +   
Sbjct: 764 LYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKM 823

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             KG SP+  TY+ LIGGY ++ E  +   L  EME     P + +Y +LI+ LC+  KL
Sbjct: 824 KLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKL 883

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            EA    + M+   + P V IY  L+     KG    A    EEM  +G++
Sbjct: 884 LEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIE 934



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 186/408 (45%), Gaps = 41/408 (10%)

Query: 3    LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
            + E A +V   ++ +GF     +F+ L    + +D+ D    +Y+  +++    N  T  
Sbjct: 672  MVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCS 731

Query: 63   TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             L++ALCK GQ++   ++L R   K   P  ++  ++I    ++  +    + +  M ++
Sbjct: 732  ILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQ 791

Query: 123  NMIHDTIAYSLIVYA---------------KVKMRNLESALVVY---------------- 151
             M  D +AY+ ++                 K+K++ +  ++  Y                
Sbjct: 792  GMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 851

Query: 152  ----EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
                +EM   G   N   Y T I   C+  K+ EA  + ++ME+ G+ P    +N+LI+G
Sbjct: 852  FDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDG 911

Query: 208  CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
            C    +IE++  + E+M  + +  +   +N +I  L   G   +A  ML     KG  P+
Sbjct: 912  CCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPD 971

Query: 268  EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
              TY+ LI GY   G +Q  + LY EM+   I PTL  Y  LI SLC    +E   K F 
Sbjct: 972  VFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFG 1030

Query: 328  IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV--SEGLKPST 373
             M   SL P + +Y  ++  +   G+  KA +L ++M+  S GL  +T
Sbjct: 1031 EM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTT 1075



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 171/375 (45%), Gaps = 14/375 (3%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E +F V   ++      SLI+FNTL+  + K+   +    +   M +    P+  T   L
Sbjct: 639  EKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSIL 698

Query: 65   ISALCKG-------GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
                          G  +T VD   +++   CS  +++N      + +E +IE+   +L 
Sbjct: 699  FDGYSSNDKADAALGVYETAVDSGLKMNAYTCS--ILLNA-----LCKEGQIEKAEEILG 751

Query: 118  RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            R + K ++ + + Y+ ++    +  +L  A +  + M K+G   +   Y   I  +CE G
Sbjct: 752  REMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELG 811

Query: 178  KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
             +E A   + +M+  G+ P  ET+N+LI G  +    ++     ++M     +P+  ++ 
Sbjct: 812  DMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYG 871

Query: 238  EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
             +I  LC+     +A  +     D+G SPN   Y+ LI G   +G+I++  +   EM  K
Sbjct: 872  TLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKK 931

Query: 298  SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
             I   L  Y +LI  L   GKL EA+     +    L P V  Y SL+  +   GN  + 
Sbjct: 932  GIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRC 991

Query: 358  LHLCEEMVSEGLKPS 372
            + L EEM + G+KP+
Sbjct: 992  IALYEEMKTSGIKPT 1006



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 170/372 (45%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++   A D+   L   G   S  S   L+  + K+ +  +   ++ ++LE+   P++   
Sbjct: 496 KMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 555

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              I A  K   +   +++ +R+   R SP V +   LI  + +  ++++   L   ML 
Sbjct: 556 GKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLA 615

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++   I Y+ ++    K  N E +  V E M       +   + T +    + G +E+
Sbjct: 616 RRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVED 675

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  ++ EM++ G  P   TF++L +G +   + + +L   E  +   L  +    + ++ 
Sbjct: 676 AENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLN 735

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G  ++A  +L   + KG  PNE+ Y+ +I GY+++G++         ME + + P
Sbjct: 736 ALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKP 795

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              AY  LI + C+ G +E A++    MK   + P V+ Y  L+G +  K    K   L 
Sbjct: 796 DHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLL 855

Query: 362 EEMVSEGLKPST 373
           +EM   G  P+ 
Sbjct: 856 KEMEDNGTMPNV 867



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 158/349 (45%), Gaps = 6/349 (1%)

Query: 17   RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
            +G S S+ ++N LI    +    D  + + + M +N   PN  +  TLI+ LCKG +L  
Sbjct: 826  KGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885

Query: 77   YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
               +   +  +  SP V +   LI     + +IE+     + M +K +  + + Y+ ++ 
Sbjct: 886  AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945

Query: 137  AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                   L  A  +  E+ ++G   + F Y + I  Y   G ++    L +EM+ +G+KP
Sbjct: 946  GLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005

Query: 197  YDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQANGM 255
              +T++LLI  C K     E +   +++     L P    +N ++      G+  +A  +
Sbjct: 1006 TLKTYHLLISLCTK-----EGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNL 1060

Query: 256  LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                ++K    ++ TY+ LI G  K G++ EV  L  EM+ + + P    Y  ++   C+
Sbjct: 1061 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCE 1120

Query: 316  CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
                  A  +++ M+   L+  V I + LV    E+    +A ++  EM
Sbjct: 1121 MKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 156/359 (43%), Gaps = 10/359 (2%)

Query: 14   LEQRGFSLSLISFNTLIHVVTK-SDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
            +E++G     +++N LI    +  D  +    + +  L+ +  P+  T   LI    +  
Sbjct: 788  MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVS-PSVETYNILIGGYGRKY 846

Query: 73   QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            +     D+L  +      P V+   +LI  + +  ++ E  ++ + M  + +  +   Y+
Sbjct: 847  EFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYN 906

Query: 133  LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            +++        +E A    EEM K+G   N   Y T I      GK+ EA  ++ E+   
Sbjct: 907  MLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRK 966

Query: 193  GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN--AK 250
            GLKP   T+N LI G   A  ++  ++  E+M +  + P+   ++ +I    + G    K
Sbjct: 967  GLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTK 1026

Query: 251  QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            +  G ++L       P+ + Y+ ++  YA  G++ +   L  +M  KSI      Y SLI
Sbjct: 1027 KIFGEMSL------QPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLI 1080

Query: 311  SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
                + GKL E       MK+  + P  D Y+ +V  H E  +   A     EM  +GL
Sbjct: 1081 LGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGL 1139



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 140/313 (44%), Gaps = 41/313 (13%)

Query: 99  LILRIIQEER--IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           L+L ++  E   I E   L   +  + +   + + +L++   VK +     + V+  +L+
Sbjct: 486 LLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 545

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
             F  + F+Y   I A  +   + +   L   M++  + P    +N+LI+G  K +++++
Sbjct: 546 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKD 605

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ------------------------- 251
           +    ++M++R+LLPS   +N +I   C+ GN ++                         
Sbjct: 606 AEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLK 665

Query: 252 ----------ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                     A  +LT   D+GF P+  T+S L  GY+   +    L +Y       +  
Sbjct: 666 GLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLK- 724

Query: 302 TLPAYTS--LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            + AYT   L+++LC+ G++E+A++      +  LVP   +Y +++  +  KG+   A  
Sbjct: 725 -MNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARM 783

Query: 360 LCEEMVSEGLKPS 372
             + M  +G+KP 
Sbjct: 784 KIDAMEKQGMKPD 796



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 87/176 (49%)

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
           +D ++ LL     ++K I E+      + +  + PS  +   ++  L +    +    + 
Sbjct: 481 HDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVF 540

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L+  F P++  Y   I    K  ++ + L+L+  M++  ISPT+  Y  LI  LC+ 
Sbjct: 541 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKV 600

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++++A++ F  M +  L+P +  Y +L+  + + GN  K+  + E M ++ ++PS
Sbjct: 601 RQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPS 656



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 10   VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
            V R +E RG S ++  +N LI       + +  +R  + M +     N  T  TLI  L 
Sbjct: 889  VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLS 948

Query: 70   KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI------------LRIIQEERI-------- 109
              G+L    DML  I  K   P V    SLI            + + +E +         
Sbjct: 949  MNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLK 1008

Query: 110  ----------EEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
                      +EG+ L K++  + ++  D + Y+ +++      +++ A  + ++M+++ 
Sbjct: 1009 TYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKS 1068

Query: 159  FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
               +   Y + I    + GK+ E   L+ EM+   ++P  +T++++++G  + K    + 
Sbjct: 1069 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAY 1128

Query: 219  SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             +  +M  + LL      +E++  L E   +K+A  +++
Sbjct: 1129 VWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVIS 1167


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 187/371 (50%), Gaps = 3/371 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATIRT 63
           E A  V  YL     S++  + + ++H++ KS + D   +I + +L  NI+  N++ +  
Sbjct: 398 EQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKV-NDSLLTL 456

Query: 64  LISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L+  LCK G+    +D+  R+  K+  +     + +L+  + +   +EE   + K M+ +
Sbjct: 457 LVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVER 516

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D I+Y+ +++   K   +E A  + E+M+K+GF  +++ Y   +    + GK+++ 
Sbjct: 517 GLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDV 576

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++ E ++ G+ P   T+ L++EG   A RI+ ++S   +++  K+  S   +N +I  
Sbjct: 577 GRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAA 636

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + GN  +A  +          P   TYS +I G      ++E   ++ EM  + + P 
Sbjct: 637 HSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPN 696

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT+LI   C+ G++++ +   + M S+ + P    Y  ++  + + GN  +A  L  
Sbjct: 697 VFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLN 756

Query: 363 EMVSEGLKPST 373
           EM++ G+ P T
Sbjct: 757 EMIANGISPDT 767



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 170/371 (45%), Gaps = 1/371 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  AFD       +G   SL S N L+  + KS+     +R++  M       +  T  T
Sbjct: 187 FHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYAT 246

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I+A CKGG++   V +  ++      P V+   +LI  + +  R+EE ++   RM+   
Sbjct: 247 AINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENK 306

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    + Y ++V   VK    + A  V  EM  +GFS N FV+   I  Y   G +++A 
Sbjct: 307 VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDAL 366

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  +M   GLKP   T N L++G  +  ++E++    E ++S  L  +  A + ++  L
Sbjct: 367 RVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLL 426

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPT 302
           C+      A  ++   L +    N+   + L+ G  K G+  E + L++ + + K ++  
Sbjct: 427 CKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAAN 486

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
                +L+  LC+ G +EE     K M    LV     Y +L+    + G   +A  L E
Sbjct: 487 TTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKE 546

Query: 363 EMVSEGLKPST 373
           +M+ +G KP T
Sbjct: 547 KMMKQGFKPDT 557



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 125/238 (52%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           VK   L  +  V++ M + G   + + Y T I AYC+ GKI+EA  L  +M   G+ P  
Sbjct: 217 VKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNV 276

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N LI+G  K+ R+EE+L +  +M+  K+ PS   +  ++  L +     +AN +L  
Sbjct: 277 VTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVE 336

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              KGFSPNE  ++ LI GY+++G + + L++  +M  K + P    + +L+   C+  +
Sbjct: 337 MYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQ 396

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           +E+A++  + + S+ L    D    ++ +  +      AL + + ++   +K + S L
Sbjct: 397 MEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLL 454



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 5/309 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E  F VC+ + +RG  L  IS+NTLI    KS + +  +++ + M++    P+  T   L
Sbjct: 504 EEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFL 563

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  L   G++     +L         P +     ++      +RI+  + L  +++   +
Sbjct: 564 MKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKV 623

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               + Y++++ A  K  N   A  + + M         F Y++ I   C    +EEA  
Sbjct: 624 ELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKG 683

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + +EM N GL P    +  LI G  K  ++++  S  ++M S  + P+   +  MI   C
Sbjct: 684 IFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYC 743

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + GN K+A  +L   +  G SP+ +TY+ L  GY KE E++E L+    +  + I+    
Sbjct: 744 KMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQGDTAVPLEEIT---- 799

Query: 305 AYTSLISSL 313
            YT+L+  L
Sbjct: 800 -YTTLVDKL 807



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 35/179 (19%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  AF +   +       ++ +++++IH +  +D  +    I++ M      PN      
Sbjct: 643 FTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTA 702

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK GQ+                                ++IE    +L+ M    
Sbjct: 703 LIGGYCKLGQM--------------------------------DQIES---ILQEMTSNC 727

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           +  + I Y++++    KM N + A  +  EM+  G S ++  YT     YC+  ++EE 
Sbjct: 728 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET 786


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 165/347 (47%), Gaps = 1/347 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN+L+  + +S+  +  W  +  + E +++ +  +   +I   C+ G L     +L  + 
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQ 189

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
               SP V++ T+LI    +   IE   +   +M    ++ +   +++++    K    +
Sbjct: 190 DMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKK 249

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
               ++E+M   G   N + Y   +  YC  GKI  A  L  EM   G++    T+N LI
Sbjct: 250 DGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLI 309

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  + +R+ E+    +QM    + P+   +N +I   C+ GN  +A+ +L      G S
Sbjct: 310 GGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLS 369

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ +TY+ LI GY+K G  + V  L  EME + ISP+    T LI +  +  ++E+A + 
Sbjct: 370 PSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQI 429

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  M+   LVP V +Y  L+     KGN  ++  L   M    ++PS
Sbjct: 430 YSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPS 476



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 148/316 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F  LI+ + K       + +++ M  N  +PN  T   L++  C  G++    D+ D +
Sbjct: 234 TFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEM 293

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +     V+   +LI  + +EER+ E   L+ +M +  +  + I Y+ ++     + NL
Sbjct: 294 RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNL 353

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  + +++   G S +   Y   I  Y + G  +    L +EME  G+ P   T  +L
Sbjct: 354 DKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVL 413

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   + + +E++      M    L+P    +  +I  LC  GN K+++ +     +   
Sbjct: 414 IDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHV 473

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+++ Y+ +I GY KE      L+L  EME K + P + +Y+S+I  LC+ GK EEA+ 
Sbjct: 474 EPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEV 533

Query: 325 YFKIMKSHSLVPGVDI 340
               M    L P   I
Sbjct: 534 LLDKMIELQLKPSASI 549



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 34/279 (12%)

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY-------------- 173
            + Y  I+ A +K + L+ AL+ + EM+ +G      ++ + +G+               
Sbjct: 93  ALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFN 152

Query: 174 --------------------CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
                               CE G ++++  L+  +++ GL P    +  LI+GC K   
Sbjct: 153 ELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGD 212

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           IE +  + ++M    L+ +   F  +I  L + G  K    +       G  PN  TY+ 
Sbjct: 213 IERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNC 272

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           L+  Y  EG+I     L+ EM  + +   +  Y +LI  +C+  ++ EA+K    MK  +
Sbjct: 273 LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAA 332

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + P +  Y +L+G   + GN  KA  L +++ S GL PS
Sbjct: 333 VSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPS 371



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 122/299 (40%), Gaps = 41/299 (13%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVW---RIYQHMLENIRYPNEATIRT 63
           AFD+   + +RG   +++++NTLI  + + +R   VW   ++   M +    PN  T  T
Sbjct: 286 AFDLFDEMRERGVEANVVTYNTLIGGMCREER---VWEAEKLVDQMKKAAVSPNLITYNT 342

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C  G L     +LD++     SP ++                             
Sbjct: 343 LIGGFCDVGNLDKASSLLDQLKSNGLSPSLV----------------------------- 373

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                  Y++++    K  N +    +  EM  RG S +    T  I AY    ++E+A 
Sbjct: 374 ------TYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   ME  GL P    + +LI G      ++ES      M    + PS   +N MI   
Sbjct: 428 QIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGY 487

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           C+  N+ +A  +L     KG  PN  +YS +IG   K+G+ +E   L  +M    + P+
Sbjct: 488 CKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPS 546



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 4/203 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+  G S SL+++N LI   +K+     V  + + M      P++ T   LI A  +  +
Sbjct: 363 LKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQE 422

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    +   +      P V V   LI  +  +  ++E   L + M   ++    + Y+ 
Sbjct: 423 MEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNT 482

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   K  N   AL +  EM  +G   N   Y++ IG  C+ GK EEA  L+ +M    
Sbjct: 483 MIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQ 542

Query: 194 LKPYDETFNLLIEGCAKAKRIEE 216
           LKP     N++    +KAK   E
Sbjct: 543 LKPSASILNMI----SKAKNFTE 561


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 173/366 (47%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +     + +  E  G +  L + + LI+           + ++ ++L+   +PN  T+ T
Sbjct: 77  YPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNT 136

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+++  +   D++  +      +   +LI  + +    +    LL+++   +
Sbjct: 137 LIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHS 196

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ I++   K + L  A  +Y EM+ +G S N F YTT I  +C  G ++EA 
Sbjct: 197 VKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAF 256

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM+   + P   TFN+LI+  AK  +I+E++S  E+M  + + P+   +  +I  L
Sbjct: 257 SLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGL 316

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+  + ++A  +     ++G  PN  +Y+ L+    K G ++   + +  +  K     +
Sbjct: 317 CKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNV 376

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +I+ LC+ G   +       M+    +P    +++++   LEK    KA     E
Sbjct: 377 RTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLRE 436

Query: 364 MVSEGL 369
           M++ GL
Sbjct: 437 MIARGL 442



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 146/309 (47%), Gaps = 2/309 (0%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V   +R+   R  P   +  +++  +++ +R    + L K+     +  D    S+++  
Sbjct: 46  VASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINC 105

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              + ++  A  V+  +LKRG+  N+    T I   C  G+I+ A     ++   G +  
Sbjct: 106 FCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLD 165

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++  LI G  KA   +       ++    + P    +  +I  LC+      A  + +
Sbjct: 166 QVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYS 225

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + KG SPN  TY+ LI G+   G ++E   L  EM+ K+I+P +  +  LI +L + G
Sbjct: 226 EMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEG 285

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SY- 375
           K++EA   F+ MK  ++ P +  Y SL+    +  +  +A+ LC++M  +G++P+  SY 
Sbjct: 286 KIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYT 345

Query: 376 LCSASTCRG 384
           +   + C+G
Sbjct: 346 ILLDALCKG 354



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 141/313 (45%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P       ++S+L K  +  T + +  +      +P +   + LI        I     +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              +L++    + I  + ++        ++ AL  +++++ +GF  +   Y T I   C+
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ +    L++++E   +KP    +  +I    K K + ++     +M+ + + P+   
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I   C  GN K+A  +L     K  +P+  T++ LI   AKEG+I E + L+ EM+
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
           +K++ P +  YTSLI  LC+   LE A    K MK   + P V  Y  L+    + G   
Sbjct: 299 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLE 358

Query: 356 KALHLCEEMVSEG 368
            A    + ++ +G
Sbjct: 359 NAKQFFQHLLVKG 371



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 114/262 (43%)

Query: 111 EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI 170
           + +    RML       T  ++ I+ + VK +   + + ++++    G + +    +  I
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 171 GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             +C    I  A  +   +   G  P   T N LI+G      I+ +L + ++++++   
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
               ++  +I  LC+ G  K    +L         P+ + Y+ +I    K   + +   L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           Y EM  K ISP +  YT+LI   C  G L+EA      MK  ++ P V  +  L+    +
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283

Query: 351 KGNKAKALHLCEEMVSEGLKPS 372
           +G   +A+ L EEM  + + P+
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPN 305



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 63/121 (52%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +C+ ++++G   ++ S+  L+  + K  R +   + +QH+L    + N  T   +
Sbjct: 323 ERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVM 382

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G     +D+  ++ GK C P  I   ++I  +++++  ++    L+ M+ + +
Sbjct: 383 INGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442

Query: 125 I 125
           +
Sbjct: 443 L 443


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 169/361 (46%), Gaps = 43/361 (11%)

Query: 57  NEATIRTLISALCKGGQLQTYVDML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           N   I  L+  LC   +L   +D+L  R+    C+P V+   +L+     E+R EE + L
Sbjct: 128 NNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALEL 187

Query: 116 LKRMLR---KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           L  M     ++   + ++Y++++        ++ A  ++ EM+ RG   N   YTT I  
Sbjct: 188 LHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDG 247

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+   ++ A  + Q+M + G+KP ++T+N LI G     + +E +   E+M +  L P 
Sbjct: 248 LCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPD 307

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE--------- 283
           C  +  ++  LC  G  ++A  +    + KG  PN   Y  LI GYA +G          
Sbjct: 308 CYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLN 367

Query: 284 --------------------------IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                                     I E + ++ +M+ + +SP +  Y +LI +LC+ G
Sbjct: 368 LMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLG 427

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLV-GI-HLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           ++++A   F  M +  + P + ++ SLV G+  ++K  KAK  +   EM+++G++P   +
Sbjct: 428 RVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF--EMLNQGIRPDVVF 485

Query: 376 L 376
            
Sbjct: 486 F 486



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 163/367 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  RG   +++++ T+I  + K+   D    ++Q M++    P+  T   LI 
Sbjct: 222 AYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIH 281

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G+ +  V ML+ +      P      SL+  +    R  E   L   M+RK +  
Sbjct: 282 GYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKP 341

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y ++++       L     +   M++ G S +  ++     AY +   I+EA  + 
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  GL P    +  LI+   K  R+++++    QMM+  + P+   FN ++  LC  
Sbjct: 402 NKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTV 461

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A       L++G  P+ + ++ ++     +G++ +  +L   ME     P + +Y
Sbjct: 462 DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISY 521

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+LI   C  G+++EA K   +M S  L P    Y +L+  +   G    A  +  EM+ 
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581

Query: 367 EGLKPST 373
            G+ P  
Sbjct: 582 NGITPGV 588



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 155/351 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+  +I+      + D  + ++  M++    PN  T  T+I  LCK   +     + 
Sbjct: 202 NVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  K   P       LI   +   + +E + +L+ M    +  D   Y  ++      
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  +++ M+++G   N  +Y   I  Y   G + E + L+  M   GL P    F
Sbjct: 322 GRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++    AK   I+E++    +M  + L P    +  +I  LC+ G    A       ++
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G +PN   ++ L+ G     + ++  + Y+EM  + I P +  + +++ +LC  G++ +
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +   +M+     PGV  Y +L+G H   G   +A    + M+S GLKP 
Sbjct: 502 AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 160/366 (43%), Gaps = 8/366 (2%)

Query: 16  QRGFSLSLISFNTLIH-VVTK---SDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++G   ++  +  LIH   TK   S+ +DL+      M+EN   P+      + +A  K 
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLL----NLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             +   + + +++  +  SP V+   +LI  + +  R+++ ++   +M+ + +  +   +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +VY    +   E A   Y EML +G   +   + T +   C  G++ +A  L+  ME 
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G +P   ++  LI G     RI+E+    + M+S  L P    +N ++   C  G    
Sbjct: 512 VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A G+    L  G +P  +TYS ++ G        E  +LY  M        +  Y  +++
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            L +   ++EA K F+ + S      +  +  ++G   + G    A+HL   + S GL P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691

Query: 372 STSYLC 377
                C
Sbjct: 692 DVFTYC 697



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 158/368 (42%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D+   + + G S     FN +     K    D    I+  M +    P+      LI AL
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDAL 423

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK G++   V   +++  +  +P + V  SL+  +   ++ E+       ML + +  D 
Sbjct: 424 CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV 483

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + ++ I+        +  A  + + M + G       YTT IG +C  G+I+EA   +  
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDV 543

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M + GLKP + T+N L+ G  +A RI+++     +M+   + P    ++ ++  L     
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +    +  G   N   Y+ ++ G +K   + E  KL+  +  K     +  +  
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I +L + G+ E+A   F  + S+ LVP V  Y  +    +E+G   +   L   M   G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723

Query: 369 LKPSTSYL 376
             P++  L
Sbjct: 724 TTPNSRML 731



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/376 (20%), Positives = 161/376 (42%), Gaps = 5/376 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPN 57
           RL E    + + + + G +  ++S+NTL+       R +    +  HM+ + +     PN
Sbjct: 144 RLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL-HMMADSQGRSCPPN 202

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             +   +I+     GQ+    ++   +  +   P V+  T++I  + + + ++    + +
Sbjct: 203 VVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQ 262

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           +M+ K +  D   Y+ +++  + +   +  + + EEM   G   + + Y + +   C  G
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +  EA  L   M   G+KP    + +LI G A    + E       M+   L P    FN
Sbjct: 323 RCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN 382

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +     +     +A  +      +G SP+ + Y  LI    K G + + +  + +M  +
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE 442

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            ++P +  + SL+  LC   K E+A +++  M +  + P V  + +++     KG   KA
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502

Query: 358 LHLCEEMVSEGLKPST 373
             L + M   G +P  
Sbjct: 503 QRLIDLMERVGTRPGV 518



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 139/296 (46%), Gaps = 21/296 (7%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYS--LIVYAKVKMR---NLESALVV--YEEMLKR---G 158
           +++ + L   +L        IA++  L   ++V  R     ES LVV  +  M++     
Sbjct: 30  LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            + +   Y+  IG +C  G++E        +  +G +  +   N L++G   AKR+ E++
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 219 S-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGFSPNEITYSHL 274
               ++M      P   ++N +++  C    A++A  +L +  D   +   PN ++Y+ +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G+  EG++ +   L+ EM  + I P +  YT++I  LC+   ++ A+  F+ M    +
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-------TSYLCSASTCR 383
            P  D Y  L+  +L  G   + + + EEM + GLKP         +YLC+   CR
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 135/312 (43%), Gaps = 6/312 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL--- 74
           G + ++  FN+L++ +   D+ +     Y  ML     P+     T++  LC  GQ+   
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           Q  +D+++R+ G R  P VI  T+LI       RI+E    L  ML   +  D   Y+ +
Sbjct: 503 QRLIDLMERV-GTR--PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           ++   +   ++ A  V+ EML+ G +     Y+T +       +  EA  L   M  +G 
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +     +N+++ G +K   ++E+    + + S+      + FN MI  L + G  + A  
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +       G  P+  TY  +     +EG ++E   L+  ME    +P      +L+  L 
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL 739

Query: 315 QCGKLEEADKYF 326
             G +  A  Y 
Sbjct: 740 HRGDITRAGAYL 751



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 107/262 (40%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G    +IS+ TLI       R D   +    ML     P+E T  TL+   C+ G+
Sbjct: 509 MERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +   +     +P V+  ++++  +    R  E   L   M+      +   Y++
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    K   ++ A  +++ +  + F      +   IGA  + G+ E+A  L   + + G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+ L+ E   +   +EE       M      P+    N ++RRL   G+  +A 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 254 GMLTLALDKGFSPNEITYSHLI 275
             L    +K FS    T + LI
Sbjct: 749 AYLCKLDEKNFSLEASTTAMLI 770


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 173/351 (49%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++F +LI  + K  R D  +R+Y+ ML++ + PN     +LI +  K G+ +    +   
Sbjct: 478 VTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKE 537

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  + CSP + +  + +  + +     +G  L + +  +  I D ++YS++++  VK   
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGF 597

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
                 ++  M ++G   ++  Y TFI  +C+ GK+ +A  L++EM+  G +P   T+  
Sbjct: 598 ARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGS 657

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G AK  R++E+    E+  S  L  +   ++ +I    + G   +A  ++   + KG
Sbjct: 658 VIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 717

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +PN  T++ L+    K  EI E L  +  M+    +P    Y+ LI+ LC+  K  +A 
Sbjct: 718 LTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +++ M+   L P    Y +++    + GN A+A  L E   + G  P ++
Sbjct: 778 VFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA 828



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 181/370 (48%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +    + RG   S+I++N ++  + K  R     R ++ M ++   PN +T   
Sbjct: 354 FDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYNV 412

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LCK G+++    + D +      P V+    +I R+ + ++++E   + + M  K 
Sbjct: 413 LIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI 472

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + +  ++    K   ++ A  +YE+ML      N+ VYT+ I ++ + G+ E+ +
Sbjct: 473 CSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGH 532

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM + G  P     N  ++   KA    +  +  E++ SR  +P   +++ +I  L
Sbjct: 533 KIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGL 592

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A++   +     ++G   +   Y+  I G+ K G++ +  +L  EM+ K   PT+
Sbjct: 593 VKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTV 652

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS+ L   V IY SL+    + G   +A  + EE
Sbjct: 653 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEE 712

Query: 364 MVSEGLKPST 373
           ++ +GL P+ 
Sbjct: 713 LMQKGLTPNV 722



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 164/395 (41%), Gaps = 71/395 (17%)

Query: 14  LEQRGFSLSLISFNTLIHVVT-----------------------------------KSDR 38
           +++ G+ +S+  F T+I V                                     K+ +
Sbjct: 224 MQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGK 283

Query: 39  NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
            D+ W+ +  +  +   P++ T  ++I  LCKG +L   V++ +++   R  P      +
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           +I+      + +E   LL+R   +  I   IAY+ I+    K   L  AL  +EEM K+ 
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKD 402

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            + N   Y   I   C+ G++E A  +   M+ AGL P   T N++I+   KAK+++E  
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDE-- 460

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                        +CS F  M  ++C                    SP+E+T+  LI G 
Sbjct: 461 -------------ACSIFEGMNHKIC--------------------SPDEVTFCSLIDGL 487

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K+G + +  +LY +M      P    YTSLI S  +CG+ E+  K FK M      P +
Sbjct: 488 GKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDL 547

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  + +    + G   K   L EE+ S G  P  
Sbjct: 548 RLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDV 582



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 170/387 (43%), Gaps = 35/387 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L ++N LI ++ K+   +  +++   M E   +PN  T+  +I  LCK  +L     + 
Sbjct: 406 NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIF 465

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + ++ K CSP  +   SLI  + ++ R+++   L ++ML  + I + + Y+ ++ +  K 
Sbjct: 466 EGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKC 525

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E    +++EM+ RG S +  +   ++    + G+  +   L +E+++ G  P   ++
Sbjct: 526 GRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSY 585

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++LI G  KA    E+      M  +  +    A+N  I   C+ G   +A  +L     
Sbjct: 586 SILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKT 645

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P  +TY  +I G AK   + E   L+ E +   +   +  Y+SLI    + G+++E
Sbjct: 646 KGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDE 705

Query: 322 ADKYFKIMKSHSLVPGV--------------DIYESLVGIHLEKGNKA------------ 355
           A    + +    L P V              +I E+LV     K  K             
Sbjct: 706 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILIN 765

Query: 356 ---------KALHLCEEMVSEGLKPST 373
                    KA    +EM  +GLKP+T
Sbjct: 766 GLCRVRKFNKAFVFWQEMQKQGLKPNT 792



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 135/314 (42%), Gaps = 35/314 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ RGF   ++S++ LIH + K+      + ++  M E     +     T I   CK G+
Sbjct: 573 IKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGK 632

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L+ +  K   P V+   S+I                          D +A   
Sbjct: 633 VNKAYQLLEEMKTKGRQPTVVTYGSVI--------------------------DGLA--- 663

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
                 K+  L+ A +++EE    G   N  +Y++ I  + + G+I+EA  +M+E+   G
Sbjct: 664 ------KIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 717

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N L++   KA+ I E+L   + M + K  P+   ++ +I  LC      +A 
Sbjct: 718 LTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                   +G  PN ITY+ +I G AK G I E   L+   +     P   +Y ++I  L
Sbjct: 778 VFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGL 837

Query: 314 CQCGKLEEADKYFK 327
               +  EA K F+
Sbjct: 838 SYSRRAMEAYKIFE 851



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 13/360 (3%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++++L+ V+ K+ + D   +I   M      P+  T   LI +  K  +L+   D++  +
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 85  HGKRCSPMVIVNTSLI--LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
              +  P     T+LI  L  +QE  I   + L  +M           ++ ++    +  
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIM--LTLFHQMQELGYEVSVHLFTTVIRVFAREG 247

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            L++AL + +EM      A+  +Y   I  + + GK++ A     E+++ GL P D T+ 
Sbjct: 248 RLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYT 307

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +I    K  R++E++   EQM   + +P   A+N MI      G   +A  +L     +
Sbjct: 308 SMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKAR 367

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P+ I Y+ ++    K+G + E L+ + EM+ K  +P L  Y  LI  LC+ G++E A
Sbjct: 368 GCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAA 426

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH----LCEEMVSEGLKPSTSYLCS 378
            K    MK   L P V      V I +++  KAK L     + E M  +   P     CS
Sbjct: 427 FKVRDAMKEAGLFPNV----MTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCS 482



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 104/217 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++ +G   +++++ ++I  + K DR D  + +++    N    N     +LI 
Sbjct: 636 AYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLID 695

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +++ +  K  +P V     L+  +++ E I E +V  + M       
Sbjct: 696 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTP 755

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS+++    ++R    A V ++EM K+G   N+  YTT I    + G I EA+ L 
Sbjct: 756 NHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLF 815

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           +  +  G  P   ++N +IEG + ++R  E+    E+
Sbjct: 816 ERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 4/253 (1%)

Query: 133 LIVYAK-VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           L+V AK VK    E  L    EM   GF  ++      I +  +  K+ E   L+Q M  
Sbjct: 135 LLVMAKNVKFDYFEQIL---GEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRK 191

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
              +P    +  LI   +  +  +  L+   QM       S   F  +IR     G    
Sbjct: 192 FKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDA 251

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L          + + Y+  I  + K G++    K ++E++   + P    YTS+I 
Sbjct: 252 ALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIG 311

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+  +L+EA + F+ M+ +  VP    Y +++  +   G   +A  L E   + G  P
Sbjct: 312 VLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIP 371

Query: 372 STSYLCSASTCRG 384
           S        TC G
Sbjct: 372 SVIAYNCILTCLG 384


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 8/328 (2%)

Query: 42  VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
           +WR Y   L+N      AT   ++ +LC+ G+ +   +   R+      P V+  T+ I 
Sbjct: 207 MWR-YGFSLDN------ATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWID 259

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FS 160
            + +   +++   +L+ M+ + +  +   ++ ++    K+   E A  ++ +++K   + 
Sbjct: 260 GLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK 319

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            N   YT  IG YC  GK+  A  L+  M   GLKP   T+  LI G  K    + +   
Sbjct: 320 PNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFEL 379

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
             +M     LP+   +N +I   C+ G  ++A  +L +A  +G   ++ITY+ LI  + K
Sbjct: 380 MNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCK 439

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           +G I   L L+  M      P + AYTSLIS+ CQ  ++EE+ K+F       L+P    
Sbjct: 440 QGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQT 499

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEG 368
           Y S++  + + G    AL + E MV  G
Sbjct: 500 YTSMIAGYCKVGRSTLALRVFERMVQNG 527



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 171/372 (45%), Gaps = 2/372 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E A D+   +   G  L + + N ++ V  ++       +++  M      P+E + 
Sbjct: 126 RLPEAA-DMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 184

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           R L+   C+ G+++    +L  +     S      T ++  + ++ R ++     +RML 
Sbjct: 185 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 244

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                + + Y+  +    K R ++ A  V EEM+ RG   N + +TT I   C+ G  E 
Sbjct: 245 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 304

Query: 182 A-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           A    ++ ++++  KP   T+ ++I G  +  ++  +     +M+ + L P+ + +  +I
Sbjct: 305 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 364

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+ G+  +A  ++     +GF PN  TY+ +I G+ K+G+IQE  K+      + + 
Sbjct: 365 GGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLK 424

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
                YT LI+  C+ G +  A   F  M  +   P ++ Y SL+  + ++    ++   
Sbjct: 425 FDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKF 484

Query: 361 CEEMVSEGLKPS 372
            ++ +  GL P+
Sbjct: 485 FDKCLMIGLLPT 496



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 15/318 (4%)

Query: 61  IRTLISALCKGGQLQTYVDML--DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           +R +++A  + G+L    DM+   R HG    P+ +   + +LR+     +E G  +  R
Sbjct: 114 MRGMVAAFGEAGRLPEAADMVLEMRSHG---LPLCVETANWVLRV----GLETGSFVYAR 166

Query: 119 -----MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
                M R  +  D  ++  +V    +   +E    +   M + GFS ++   T  + + 
Sbjct: 167 KVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSL 226

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           CE G+ ++ +   + M   G  P    +   I+G  K + ++++    E+M+ R L P+ 
Sbjct: 227 CEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 286

Query: 234 SAFNEMIRRLCECGNAKQANGM-LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
                +I  LC+ G  ++A  + L L     + PN  TY+ +IGGY +EG++     L  
Sbjct: 287 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV 346

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            M  + + P    YT+LI   C+ G  + A +    MK    +P +  Y +++    +KG
Sbjct: 347 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 406

Query: 353 NKAKALHLCEEMVSEGLK 370
              +A  +     S+GLK
Sbjct: 407 KIQEAYKVLRMATSQGLK 424



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 1/326 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK- 70
           R + + G   +++++   I  + K       + + + M+     PN  T  TLI  LCK 
Sbjct: 240 RRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKI 299

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
           G   + +   L  I      P V   T +I    +E ++    +LL RM+ + +  +T  
Sbjct: 300 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNT 359

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ ++    K  + + A  +  +M + GF  N + Y   I  +C+ GKI+EA  +++   
Sbjct: 360 YTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMAT 419

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           + GLK    T+ +LI    K   I  +L   ++M+     P   A+  +I   C+    +
Sbjct: 420 SQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQME 479

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           ++       L  G  P + TY+ +I GY K G     L+++  M           Y +LI
Sbjct: 480 ESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALI 539

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVP 336
           S LC+  +LEEA   ++ M    LVP
Sbjct: 540 SGLCKESRLEEAKALYEGMLDKRLVP 565



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 16/222 (7%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           +L+ G    SFVY               A  +   M  AG+ P + +F  L+  C +  +
Sbjct: 152 VLRVGLETGSFVY---------------ARKVFDGMTRAGVCPDERSFRALVVVCCREGK 196

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           +EE  +    M         +    ++R LCE G  K  +      L+ G  PN + Y+ 
Sbjct: 197 VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTA 256

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF-KIMKSH 332
            I G  K   +++   +  EM  + + P +  +T+LI  LC+ G  E A + F K++KS 
Sbjct: 257 WIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSS 316

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           S  P V  Y  ++G +  +G  A+A  L   MV +GLKP+T+
Sbjct: 317 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 358



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 1/340 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEAT 60
           R  + AF V   +  RG   ++ +  TLI  + K    +  +R++  ++++  Y PN  T
Sbjct: 265 RYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHT 324

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I   C+ G+L     +L R+  +   P     T+LI    +    +    L+ +M 
Sbjct: 325 YTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMK 384

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++  + +   Y+ ++    K   ++ A  V      +G   +   YT  I  +C+ G I 
Sbjct: 385 QEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHIT 444

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L   M   G  P  E +  LI    + +++EES  + ++ +   LLP+   +  MI
Sbjct: 445 YALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMI 504

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+ G +  A  +    +  G   + ITY  LI G  KE  ++E   LY  M  K + 
Sbjct: 505 AGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLV 564

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           P      +L    C+  K   A      +     V  VD+
Sbjct: 565 PCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDV 604



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 124/280 (44%), Gaps = 3/280 (1%)

Query: 48  HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE 107
            M+E    PN  T  TLI   CKGG      ++++++  +   P +    ++I    ++ 
Sbjct: 347 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 406

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           +I+E   +L+    + +  D I Y++++    K  ++  AL +++ M++ G   +   YT
Sbjct: 407 KIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYT 466

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           + I  YC+  ++EE+     +    GL P  +T+  +I G  K  R   +L   E+M+  
Sbjct: 467 SLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQN 526

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
                   +  +I  LC+    ++A  +    LDK   P E+T   L   Y +  +    
Sbjct: 527 GCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIA 586

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           + +   ++ +    T+      +S+L   G ++ A  + K
Sbjct: 587 VSVLDRLDKRQQVHTVDVVVRKLSAL---GDVDAASLFLK 623



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%)

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           E    ++    +A R+ E+     +M S  L       N ++R   E G+   A  +   
Sbjct: 112 EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 171

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
               G  P+E ++  L+    +EG+++EV  L   M     S      T ++ SLC+ G+
Sbjct: 172 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 231

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++  ++F+ M      P V  Y + +    ++    +A H+ EEMV  GLKP+
Sbjct: 232 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN 285


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 174/394 (44%), Gaps = 38/394 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE  G    +I++N LI    KS   D    + + M      P+  T  T++ +LC  G+
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGK 223

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  +++LDR   + C P VI  T LI     +  + + M LL  M +K    D + Y++
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L+ A+     M   G   N   +   + + C  G+  +A  L+ +M   G
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 194 LKPYDETFNLLIE---------------------GCA--------------KAKRIEESL 218
             P   TFN+LI                      GC               + K+++ ++
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            Y E M+SR   P    +N ++  LC+ G    A  +L     KG SP  ITY+ +I G 
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K G+ +  ++L  EM  K + P +  Y++L+  L + GK++EA K F  M+  S+ P  
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y +++    +    ++A+     MV +G KP+
Sbjct: 524 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPT 557



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 172/364 (47%), Gaps = 6/364 (1%)

Query: 12  RYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           ++LE+   +G    +I+  +LI    +S +     RI + +  +   P+  T   LI   
Sbjct: 127 KFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGY 186

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK G++   +++L+R+     +P V+   +++  +    +++E M +L R L++    D 
Sbjct: 187 CKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDV 243

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           I Y++++ A      +  A+ + +EM K+G   +   Y   I   C+ G+++EA   +  
Sbjct: 244 ITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNN 303

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M + G KP   T N+++       R  ++      M+ +   PS   FN +I  LC    
Sbjct: 304 MPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRL 363

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +L      G  PN ++Y+ L+ G+ +E ++   ++    M  +   P +  Y +
Sbjct: 364 LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 423

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L+++LC+ GK++ A +    + S    P +  Y +++    + G    A+ L EEM  +G
Sbjct: 424 LLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG 483

Query: 369 LKPS 372
           LKP 
Sbjct: 484 LKPD 487



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 149/330 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QR     +I++  LI             ++   M +    P+  T   LI+ +CK G+L 
Sbjct: 236 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLD 295

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L+ +    C P VI +  ++  +    R  +   LL  MLRK      + +++++
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               + R L  A+ V E+M K G   NS  Y   +  +C+  K++ A   ++ M + G  
Sbjct: 356 NFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY 415

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N L+    K  +++ ++    Q+ S+   P    +N +I  L + G  + A  +
Sbjct: 416 PDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVEL 475

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L     KG  P+ ITYS L+ G  +EG++ E +K++++ME  SI P+   Y +++  LC+
Sbjct: 476 LEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK 535

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +   A  +   M      P    Y  L+
Sbjct: 536 AQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 32/336 (9%)

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           L + G+L+  +  L+R+  +   P VI  TSLI    +  + ++   +++ +     + D
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEM--------------------------------L 155
            I Y++++    K   ++ AL V E M                                L
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQL 235

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           +R    +   YT  I A C    + +A  L+ EM   G KP   T+N+LI G  K  R++
Sbjct: 236 QRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLD 295

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           E++ +   M S    P+    N ++R +C  G    A  +L+  L KG SP+ +T++ LI
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
               ++  +   + +  +M      P   +Y  L+   CQ  K++ A +Y +IM S    
Sbjct: 356 NFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCY 415

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           P +  Y +L+    + G    A+ +  ++ S+G  P
Sbjct: 416 PDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 125/272 (45%), Gaps = 3/272 (1%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           ++++   +EEG+  L+RM+ +  I D IA + ++    +    + A  + E +   G   
Sbjct: 115 KLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVP 174

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y   IG YC+ G+I++A   ++ +E   + P   T+N ++     + +++E++   
Sbjct: 175 DVITYNVLIGGYCKSGEIDKA---LEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVL 231

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++ + R+  P    +  +I   C      QA  +L     KG  P+ +TY+ LI G  KE
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 291

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E +K    M      P +  +  ++ S+C  G+  +A++    M      P V  +
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     K    +A+ + E+M   G  P++
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 103/208 (49%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A DV   + + G   + +S+N L+H   +  + D      + M+    YP+  T 
Sbjct: 362 RLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 421

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL++ALCK G++   V++L+++  K CSP++I   ++I  + +  + E  + LL+ M R
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  D I YS ++    +   ++ A+ ++ +M       ++  Y   +   C+  +   
Sbjct: 482 KGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 541

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCA 209
           A   +  M   G KP + T+ +LIEG A
Sbjct: 542 AIDFLAYMVEKGCKPTEATYTILIEGIA 569



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 4/181 (2%)

Query: 193 GLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           G + ++E   N+ +    +   +EE L + E+M+ +  +P   A   +IR  C  G  K+
Sbjct: 100 GSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKK 159

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ++ +  + G  P+ ITY+ LIGGY K GEI + L++   +E  S++P +  Y +++ 
Sbjct: 160 ATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILR 216

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           SLC  GKL+EA +           P V  Y  L+          +A+ L +EM  +G KP
Sbjct: 217 SLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKP 276

Query: 372 S 372
            
Sbjct: 277 D 277


>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 766

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 8/360 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLE------NIRYPNEATIRTLISALCKGGQLQ 75
            +++   LI+ + KS R D   ++++ M        N+   +     TLI  LCK G+L+
Sbjct: 328 DVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387

Query: 76  TYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              ++L R+   +RC P  +    LI    +  ++E    ++ RM    +  D +  + I
Sbjct: 388 EAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTI 447

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           V    +   L  A++ + +M K G   N   Y T I A C    IE+A     +M  AG 
Sbjct: 448 VGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGC 507

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P  + +  LI G  + +R  +++   E++          A+N +I   C+  NA++   
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           MLT    +G  P+ ITY+ LI  + K  + + V ++  +M    + PT+  Y ++I + C
Sbjct: 568 MLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYC 627

Query: 315 QCGKLEEADKYFKIMKSHSLV-PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             G+L EA K FK M   S V P   IY  L+    + GN  +AL L EEM  + ++P+ 
Sbjct: 628 SVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 1/315 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++N LI    ++ + +    +   M E+   P+  T+ T++  +C+   L   V     
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMD 466

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +     V+   +LI        IE+ M    +ML      D   Y  ++    ++R 
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRR 526

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              A+ V E++ + GFS +   Y   IG +C+    E+   ++ +ME  G+KP   T+N 
Sbjct: 527 DHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNT 586

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDK 262
           LI    K K  E      EQM   +L P+ + +  +I   C  G   +A  +   + L  
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRS 646

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
             +PN + Y+ LI  ++K G   + L L  EM+ K + P +  Y +L   L +  + E  
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETL 706

Query: 323 DKYFKIMKSHSLVPG 337
            K    M   S  P 
Sbjct: 707 LKLMDEMVEQSCEPN 721



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/387 (19%), Positives = 170/387 (43%), Gaps = 26/387 (6%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL+E+A       +++   L++++   LI    +    +    +Y+ +  N++  N   
Sbjct: 137 LRLYEIA-------KEKNIPLTVVATKLLIRWFGRMGMANQSVLVYERLDSNMK--NSQV 187

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGK-------RCSPMVIVNTSLILRIIQEERIEEGM 113
              +I  L + G +     +LD +  K       R +  ++++     R++ EE+I   +
Sbjct: 188 RNVVIDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKI---I 244

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
            L+ R     +  +++  +  + +  K     +A  +  +++K      +  +   +   
Sbjct: 245 GLISRFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCL 304

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK----- 228
                I   N L+ +M+   ++P   T  +LI    K++R++E+L   EQM  ++     
Sbjct: 305 GRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGN 364

Query: 229 -LLPSCSAFNEMIRRLCECGNAKQANGMLT-LALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            +      FN +I  LC+ G  K+A  +L  + +++   PN +TY+ LI GY + G+++ 
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLET 424

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             ++   M+   I P +    +++  +C+   L  A  +F  M+   +   V  Y +L+ 
Sbjct: 425 AKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIH 484

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
                 N  KA+H  ++M+  G  P  
Sbjct: 485 ACCSLSNIEKAMHWFDKMLEAGCSPDA 511



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/325 (21%), Positives = 138/325 (42%), Gaps = 1/325 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A +V   +++ G    +++ NT++  + +    ++    +  M +     N  T  T
Sbjct: 422 LETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMT 481

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A C    ++  +   D++    CSP   +  +LI  + Q  R  + + +++++    
Sbjct: 482 LIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGG 541

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D +AY++++       N E    +  +M K G   +S  Y T I  + ++   E   
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVE 601

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRR 242
            +M++M    L P   T+  +IE       + E+L   + M  R K+ P+   +N +I  
Sbjct: 602 RMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINA 661

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + GN  QA  +      K   PN  TY+ L     ++ + + +LKL  EM  +S  P 
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPN 721

Query: 303 LPAYTSLISSLCQCGKLEEADKYFK 327
                 L+  L    +L +  K+ +
Sbjct: 722 QITMEILMERLSGSDELVKLRKFMQ 746



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 134/301 (44%), Gaps = 3/301 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G   +++++ TLIH        +     +  MLE    P+      LIS LC+  +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRR 526

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +++++     S  ++    LI     +   E+   +L  M ++ M  D+I Y+ 
Sbjct: 527 DHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNT 586

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NA 192
           ++    K ++ ES   + E+M +         Y   I AYC  G++ EA  L ++M   +
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRS 646

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            + P    +N+LI   +K     ++LS  E+M  + + P+   +N + + L E   A+  
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETL 706

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++   +++   PN+IT   L+   +   E+ ++ K  +   Y   SPT  A    + S
Sbjct: 707 LKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK--FMQGYSVASPTEKASPFDVFS 764

Query: 313 L 313
           L
Sbjct: 765 L 765


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 170/366 (46%), Gaps = 7/366 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G  L+ + + T+I    + +     + ++  ML    +P+ AT   L+  LCK G 
Sbjct: 172 MPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGH 231

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQE-------ERIEEGMVLLKRMLRKNMIH 126
           LQ    +L+++      P +      I  + ++        ++ E    L +M+ K +  
Sbjct: 232 LQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEP 291

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ I+Y   K+  ++ A  + ++   +GF  + F Y + I   C+ G I+ A  L 
Sbjct: 292 DDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALF 351

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E    GLKP    +N LI+G ++   + ++L     M    + P    +N +I  LC+ 
Sbjct: 352 EEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKM 411

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    AN +L  A+ KG+ P+  T++ LI GY K  ++   + +   M    ++P +  Y
Sbjct: 412 GCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITY 471

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            S+++ LC+  K E+  + FK++     +P +  Y  L+    +     +AL L EE+ +
Sbjct: 472 NSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRN 531

Query: 367 EGLKPS 372
            GL P 
Sbjct: 532 RGLIPD 537



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 172/374 (45%), Gaps = 7/374 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV   ++      S+ S+N +++++ +    +   ++Y  M      P+  T    I 
Sbjct: 95  AVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIK 154

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           + C+  +    + +L+ +  + C    +V  ++I    +E    E   L  +MLR  +  
Sbjct: 155 SFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFP 214

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC-- 184
               ++ +++   K  +L+    +  ++LK G   N F +  FI   C  G +E AN   
Sbjct: 215 HIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKV 274

Query: 185 -----LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
                 + +M N GL+P D T+N +I G +K  +I+++    +    +  +P    +  +
Sbjct: 275 VEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSL 334

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  +C+ G+   A  +   AL KG  P+ + Y+ LI G +++G + + L+L  +M  + +
Sbjct: 335 IIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGM 394

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           SP +  Y  +I+ LC+ G + +A+       +   +P +  + +L+  + ++     A+ 
Sbjct: 395 SPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIG 454

Query: 360 LCEEMVSEGLKPST 373
           + + M S G+ P  
Sbjct: 455 ILDSMWSHGVTPDV 468



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 170/368 (46%), Gaps = 12/368 (3%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL---CKG 71
           ++ GF  + +++  +I  +      D + R+   M  N+   N       +SA+    + 
Sbjct: 32  KEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVD--NSLLEGVYVSAMRNYGRK 89

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++Q  VD+ +R+    C P +    +++  +++     +   +  RM  + +  D   +
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTF 149

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++ + +  + +   +AL +   M  +G   N+ VY T I  + E     EA  L  +M  
Sbjct: 150 TIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLR 209

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P+  TFN L+    K   ++E      +++   + P+   FN  I+ LC  G  + 
Sbjct: 210 LGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEG 269

Query: 252 ANGMLTLA-------LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           AN  +  A       ++KG  P++ TY+ +I GY+K G+IQ+  ++  + ++K   P   
Sbjct: 270 ANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEF 329

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y SLI  +CQ G ++ A   F+      L P + +Y +L+    ++G   KAL L  +M
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389

Query: 365 VSEGLKPS 372
             EG+ P 
Sbjct: 390 SKEGMSPD 397



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 162/366 (44%), Gaps = 8/366 (2%)

Query: 16  QRGFSLSLISFNTLIH------VVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISAL 68
           + G   +L +FN  I       V+  ++   +    Y H + N    P++ T  T+I   
Sbjct: 244 KNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGY 303

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
            K G++Q    +L     K   P      SLI+ + Q+  I+  + L +  L K +    
Sbjct: 304 SKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSI 363

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y+ ++    +   +  AL +  +M K G S + + Y   I   C+ G + +AN L+  
Sbjct: 364 VLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA 423

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
               G  P   TFN LI+G  K  +++ ++   + M S  + P    +N ++  LC+   
Sbjct: 424 AIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAK 483

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            +       + ++KG  PN ITY+ LI    K  ++ E L L  E+  + + P   ++ +
Sbjct: 484 PEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGT 543

Query: 309 LISSLCQCGKLEEADKYFKIM-KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +IS  C  G L+EA + F+ M + + +   V  Y  ++    EK +   A  L  EM  +
Sbjct: 544 VISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDK 603

Query: 368 GLKPST 373
           G  P +
Sbjct: 604 GCDPDS 609



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 165/365 (45%), Gaps = 7/365 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   + + G    + +FN L+H++ K        ++   +L+N   PN  T    I 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 67  ALCKGGQLQ----TYVDMLDRIH---GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
            LC+ G L+      V+  + +H    K   P      ++I    +  +I++   +LK  
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             K  + D   Y  ++    +  +++ AL ++EE L +G   +  +Y T I    + G +
Sbjct: 320 KFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLV 379

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            +A  LM +M   G+ P   T+NL+I G  K   + ++ +     +++  LP    FN +
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTL 439

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I   C+      A G+L      G +P+ ITY+ ++ G  K  + ++V++ +  +  K  
Sbjct: 440 IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGC 499

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P +  Y  LI SLC+  K+ EA    + +++  L+P    + +++      G+  +A  
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559

Query: 360 LCEEM 364
           L   M
Sbjct: 560 LFRRM 564



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/392 (19%), Positives = 163/392 (41%), Gaps = 36/392 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G      ++NT+I+  +K  +     RI +        P+E T  +LI  +C+ G + 
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDID 345

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + + +   GK   P +++  +LI  + Q+  + + + L+  M ++ M  D   Y+L++
Sbjct: 346 HALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVI 405

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               KM  +  A  +    + +G+  + F + T I  YC+  K++ A  ++  M + G+ 
Sbjct: 406 NGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT 465

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N ++ G  KA + E+ +   + +M +  LP+   +N +I  LC+     +A  +
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL 525

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL--------------------------- 288
           L    ++G  P+ +++  +I G+   G++ E                             
Sbjct: 526 LEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFS 585

Query: 289 ---------KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
                    KL++EM  K   P    Y  +I   C+ G +     +         VP + 
Sbjct: 586 EKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLT 645

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            +  ++     +    +A+ +   MV  G+ P
Sbjct: 646 TFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 130/293 (44%), Gaps = 9/293 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTK----SDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           + + G S  + ++N +I+ + K    SD N+L+       +     P+  T  TLI   C
Sbjct: 389 MSKEGMSPDIWTYNLVINGLCKMGCVSDANNLL----NAAIAKGYLPDIFTFNTLIDGYC 444

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K  ++   + +LD +     +P VI   S++  + +  + E+ M   K ++ K  + + I
Sbjct: 445 KRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNII 504

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y++++ +  K R +  AL + EE+  RG   +   + T I  +C  G ++EA  L + M
Sbjct: 505 TYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM 564

Query: 190 ENAGLKPYD-ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           E      +   T+N++I   ++   ++ +     +M  +   P    +  MI   C+ GN
Sbjct: 565 EQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGN 624

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                  L   ++ GF P+  T+  +I     +  + E + + + M    + P
Sbjct: 625 VNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 113/255 (44%), Gaps = 1/255 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G+   + +FNTLI    K  + D    I   M  +   P+  T  ++++ LCK  + + 
Sbjct: 427 KGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPED 486

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            ++    I  K C P +I    LI  + +  ++ E + LL+ +  + +I D +++  ++ 
Sbjct: 487 VMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVIS 546

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSF-VYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                 +L+ A  ++  M ++    ++   Y   I A+ E   ++ A  L  EM + G  
Sbjct: 547 GFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCD 606

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ ++I+G  K   +     +  + +    +PS + F  +I  LC      +A G+
Sbjct: 607 PDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGI 666

Query: 256 LTLALDKGFSPNEIT 270
           + L +  G  P  + 
Sbjct: 667 VHLMVRTGVVPEAVV 681


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 8/328 (2%)

Query: 42  VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
           +WR Y   L+N      AT   ++ +LC+ G+ +   +   R+      P V+  T+ I 
Sbjct: 99  MWR-YGFSLDN------ATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWID 151

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FS 160
            + +   +++   +L+ M+ + +  +   ++ ++    K+   E A  ++ +++K   + 
Sbjct: 152 GLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYK 211

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            N   YT  IG YC  GK+  A  L+  M   GLKP   T+  LI G  K    + +   
Sbjct: 212 PNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFEL 271

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
             +M     LP+   +N +I   C+ G  ++A  +L +A  +G   ++ITY+ LI  + K
Sbjct: 272 MNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCK 331

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           +G I   L L+  M      P + AYTSLIS+ CQ  ++EE+ K+F       L+P    
Sbjct: 332 QGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQT 391

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEG 368
           Y S++  + + G    AL + E MV  G
Sbjct: 392 YTSMIAGYCKVGRSTLALRVFERMVQNG 419



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 1/284 (0%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           SPM     +L++   +E ++EE   LL  M R     D    +++V +  +    +    
Sbjct: 70  SPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 129

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
            +  ML+ G   N   YT +I   C+   +++A  +++EM   GLKP   T   LI+G  
Sbjct: 130 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 189

Query: 210 KAKRIEESLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
           K    E +   + + + S    P+   +  MI   C  G   +A  +L   +++G  PN 
Sbjct: 190 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 249

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
            TY+ LIGG+ K G      +L  +M+ +   P +  Y ++I   C+ GK++EA K  ++
Sbjct: 250 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 309

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             S  L      Y  L+  H ++G+   AL L + MV  G  P 
Sbjct: 310 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 353



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 1/326 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK- 70
           R + + G   +++++   I  + K       + + + M+     PN  T  TLI  LCK 
Sbjct: 132 RRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKI 191

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
           G   + +   L  I      P V   T +I    +E ++    +LL RM+ + +  +T  
Sbjct: 192 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNT 251

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ ++    K  + + A  +  +M + GF  N + Y   I  +C+ GKI+EA  +++   
Sbjct: 252 YTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMAT 311

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           + GLK    T+ +LI    K   I  +L   ++M+     P   A+  +I   C+    +
Sbjct: 312 SQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQME 371

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           ++       L  G  P + TY+ +I GY K G     L+++  M           Y +LI
Sbjct: 372 ESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALI 431

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVP 336
           S LC+  +LEEA   ++ M    LVP
Sbjct: 432 SGLCKESRLEEAKALYEGMLDKRLVP 457



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 167/372 (44%), Gaps = 2/372 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E A D+   +   G  L + + N ++ V  ++       +++  M      P     
Sbjct: 18  RLPEAA-DMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGF 76

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+   C+ G+++    +L  +     S      T ++  + ++ R ++     +RML 
Sbjct: 77  GALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 136

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                + + Y+  +    K R ++ A  V EEM+ RG   N + +TT I   C+ G  E 
Sbjct: 137 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 196

Query: 182 A-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           A    ++ ++++  KP   T+ ++I G  +  ++  +     +M+ + L P+ + +  +I
Sbjct: 197 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 256

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+ G+  +A  ++     +GF PN  TY+ +I G+ K+G+IQE  K+      + + 
Sbjct: 257 GGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLK 316

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
                YT LI+  C+ G +  A   F  M  +   P ++ Y SL+  + ++    ++   
Sbjct: 317 FDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKF 376

Query: 361 CEEMVSEGLKPS 372
            ++ +  GL P+
Sbjct: 377 FDKCLMIGLLPT 388



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 16/222 (7%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           +L+ G    SFVY               A  +   M  AG+ P +  F  L+  C +  +
Sbjct: 44  VLRVGLETGSFVY---------------ARKVFDGMTRAGVSPMNRGFGALVVVCCREGK 88

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           +EE  +    M         +    ++R LCE G  K  +      L+ G  PN + Y+ 
Sbjct: 89  VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTA 148

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF-KIMKSH 332
            I G  K   +++   +  EM  + + P +  +T+LI  LC+ G  E A + F K++KS 
Sbjct: 149 WIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSS 208

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           S  P V  Y  ++G +  +G  A+A  L   MV +GLKP+T+
Sbjct: 209 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTN 250



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 1/340 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEAT 60
           R  + AF V   +  RG   ++ +  TLI  + K    +  +R++  ++++  Y PN  T
Sbjct: 157 RYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHT 216

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I   C+ G+L     +L R+  +   P     T+LI    +    +    L+ +M 
Sbjct: 217 YTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMK 276

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++  + +   Y+ ++    K   ++ A  V      +G   +   YT  I  +C+ G I 
Sbjct: 277 QEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHIT 336

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L   M   G  P  E +  LI    + +++EES  + ++ +   LLP+   +  MI
Sbjct: 337 YALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMI 396

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+ G +  A  +    +  G   + ITY  LI G  KE  ++E   LY  M  K + 
Sbjct: 397 AGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLV 456

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           P      +L    C+  K   A      +     V  VD+
Sbjct: 457 PCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDV 496



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 124/280 (44%), Gaps = 3/280 (1%)

Query: 48  HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE 107
            M+E    PN  T  TLI   CKGG      ++++++  +   P +    ++I    ++ 
Sbjct: 239 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 298

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           +I+E   +L+    + +  D I Y++++    K  ++  AL +++ M++ G   +   YT
Sbjct: 299 KIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYT 358

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           + I  YC+  ++EE+     +    GL P  +T+  +I G  K  R   +L   E+M+  
Sbjct: 359 SLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQN 418

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
                   +  +I  LC+    ++A  +    LDK   P E+T   L   Y +  +    
Sbjct: 419 GCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIA 478

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           + +   ++ +    T+      +S+L   G ++ A  + K
Sbjct: 479 VSVLDRLDKRQQVHTVDVVVRKLSAL---GDVDAASLFLK 515



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%)

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           E    ++    +A R+ E+     +M S  L       N ++R   E G+   A  +   
Sbjct: 4   EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDG 63

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
               G SP    +  L+    +EG+++EV  L   M     S      T ++ SLC+ G+
Sbjct: 64  MTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 123

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++  ++F+ M      P V  Y + +    ++    +A H+ EEMV  GLKP+
Sbjct: 124 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN 177


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +++ G    L   NT IHV+   +R D   R  + M      PN  T   LI 
Sbjct: 188 AMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIK 247

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMI 125
             C   +L+  ++++  +  K CSP  I   +++  + +E+RI+E  +L+++ML+  N++
Sbjct: 248 GYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLL 307

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+  V+   K  + + AL    E  +R F  +   Y+  + ++C  G++++A  +
Sbjct: 308 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 367

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM + G  P   T+  +I G  + ++++++     QM      P+  ++  ++  LC+
Sbjct: 368 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 427

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN+ +A  M+ ++ +  + PN ITYS L+ G+ +EG+  E   L  EM  K   PT   
Sbjct: 428 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVE 487

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
              LI SLCQ  K++EA ++ +   ++     V  + +++    +K +   AL L ++M 
Sbjct: 488 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 547

Query: 366 SEGLKPST 373
                P  
Sbjct: 548 LSNKHPDV 555



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 167/364 (45%), Gaps = 1/364 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIR 62
            E A ++   +  +G S   IS+ T++  + K  R   V  + + ML++    P++ T  
Sbjct: 255 LEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYN 314

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T +  L K G     ++ L     +R     +  ++++    +E R+++   ++  M  K
Sbjct: 315 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 374

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             I D + Y+ ++    + R ++ A  +  +M K G   N+  YT  +   C+ G   EA
Sbjct: 375 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 434

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +M   E     P   T+++L+ G  +  +  E+     +M+ +   P+    N +I+ 
Sbjct: 435 REMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQS 494

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A   +   L+ G + N + ++ +I G+ ++ +++  L L  +M   +  P 
Sbjct: 495 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 554

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT++I +L + G++EEA K    M    L+P    Y +++  +   G     L L E
Sbjct: 555 VVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLE 614

Query: 363 EMVS 366
           +M+S
Sbjct: 615 KMLS 618



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 154/330 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ EV   + + L+        +++NT +H+++K    D      +   E     ++   
Sbjct: 289 RIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGY 348

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             ++ + C+ G++    ++++ +  K C P V+  TS+I  + QE ++++   +L++M +
Sbjct: 349 SAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK 408

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                +T++Y+ ++    K  N   A  +     +  +  N+  Y+  +  +   GK  E
Sbjct: 409 HGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSE 468

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++EM   G  P     NLLI+   + ++++E+  + EQ ++     +   F  +I 
Sbjct: 469 ACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIH 528

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+  + + A  +L         P+ +TY+ +I    K+G I+E  KL  +M    + P
Sbjct: 529 GFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIP 588

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           T   Y ++I   C+ G++E+  K  + M S
Sbjct: 589 TPVTYRTVIHQYCRMGRVEDLLKLLEKMLS 618



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 143/304 (47%), Gaps = 1/304 (0%)

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G+L+  + +L  +      P + +  + I  ++   R+++ +  L+RM    +  + I
Sbjct: 181 RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVI 240

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++     +  LE A+ +  EM  +G S +   Y T +G  C+  +I+E   LM++M
Sbjct: 241 TYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKM 300

Query: 190 -ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
            +++ L P   T+N  +   +K    +E+L +  +   R+       ++ ++   C  G 
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  ++     KG  P+ +TY+ +I G  +E ++ +  K+  +M      P   +YT+
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L++ LC+ G   EA +   + +    +P    Y  L+     +G  ++A  L  EM+ +G
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480

Query: 369 LKPS 372
             P+
Sbjct: 481 FFPT 484



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 6/325 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEAT 60
           R  + A  + R + + G   + +S+  L++ + K+  N L  R   +M E   + PN  T
Sbjct: 394 RKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG-NSLEAREMMNMSEEDWWIPNAIT 452

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+    + G+     D++  +  K   P  +    LI  + QEE+++E    +++ L
Sbjct: 453 YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCL 512

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 + + ++ +++   +  +LE+AL + ++M       +   YTT I A  + G+IE
Sbjct: 513 NNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 572

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-SAFNEM 239
           EA  L  +M   GL P   T+  +I    +  R+E+ L   E+M+SR+    C +A+N++
Sbjct: 573 EATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ---ECRTAYNQV 629

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I +LC  GN +QA  +L   L      +  T   LI  Y  +G       +   M  +++
Sbjct: 630 IEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNL 689

Query: 300 SPTLPAYTSLISSLCQCGKLEEADK 324
            P L     +   L   GK EEADK
Sbjct: 690 IPDLKLCEKVSKKLMLEGKSEEADK 714



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 150/333 (45%), Gaps = 23/333 (6%)

Query: 58  EATIRTLISAL-----CKGGQLQT-------YVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           E  +R L+ +L     C   QLQT       +    DR    R  P+V      +L I+ 
Sbjct: 89  EGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYY---AMLEILS 145

Query: 106 EERIEEGMVLLKRMLRKNMIH---DTIAYSLIVYAKV-KMRNLESALVVYEEMLKRGFSA 161
           + ++ +G   + R++ K  I    +   Y ++ Y++  K+RN   A+ V   M K G   
Sbjct: 146 KTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRN---AMRVLTMMQKAGIEP 202

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +  +  T I       ++++A   ++ M+   ++P   T+N LI+G     R+E+++   
Sbjct: 203 DLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELI 262

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL-DKGFSPNEITYSHLIGGYAK 280
            +M  +   P   ++  ++  LC+    K+   ++   L D    P+++TY+  +   +K
Sbjct: 263 AEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSK 322

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G   E L+   E E +        Y++++ S C+ G++++A +    M S   +P V  
Sbjct: 323 HGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVT 382

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           Y S++    ++    +A  +  +M   G KP+T
Sbjct: 383 YTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 415


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 159/351 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++NTL+  + K  +     +    M+     P++ T  T+I   CK G LQ   ++L
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELL 338

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
                K   P  +   SLI  +  E  IE  + L      K++  D + Y+ +V    + 
Sbjct: 339 KDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 398

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  AL V  EM++ G   + + Y   I   C+ G I +A  +M +    G  P   TF
Sbjct: 399 GLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 458

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G  K  +++ +L   E+M +  + P    +N ++  LC+ G AK+ N      + 
Sbjct: 459 NTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMIL 518

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI  + K  +++E   +   M    + P   ++ +LI   C+ G L+ 
Sbjct: 519 KGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDG 578

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A   F+ +         D +  L+G +  K N   A  +  EM+S+G KP 
Sbjct: 579 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 166/351 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            ++NT+I    KS        + +  +     P+  T  +LI+ LC  G ++  +++ + 
Sbjct: 316 FTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNE 375

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
              K   P ++V  SL+  + ++  I   + ++  M+ +    D   Y++I+    KM N
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN 435

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A VV  + + +G+  + F + T I  YC+  K++ A  L++ M   G+ P   T+N 
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNS 495

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++ G  KA + +E     E+M+ +   P+   +N +I   C+    ++A+G++      G
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ ++++ LI G+ + G++     L+ +++ K  S T   +  LI +      ++ A+
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAE 615

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           K F  M S    P +  Y  LV    +  N  +A     EM+S+G  PS +
Sbjct: 616 KIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMA 666



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 163/352 (46%), Gaps = 1/352 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + +FN ++H + +         +   +L+     N+ T    I  LC+ G+L+  V ++
Sbjct: 210 DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV 269

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +R+ G   +P V+   +L+  + ++ +++E    L RM+ +  I D   Y+ I+    K 
Sbjct: 270 ERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L+ A  + ++ + +GF  +   Y + I   C  G IE A  L  E +   LKP    +
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L++G  +   I  +L    +M+     P    +N +I  LC+ GN   A  ++  A+ 
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIV 448

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG+ P+  T++ LI GY K  ++   L+L   M    I+P +  Y S+++ LC+ GK +E
Sbjct: 449 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE 508

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++ F+ M      P    Y  L+    +     +A  +   M  +GL P  
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDA 560



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/355 (22%), Positives = 159/355 (44%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF    +++ +LI+ +      +    ++         P+     +L+  LC+ G +  
Sbjct: 344 KGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 403

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +++ +  + C P +     +I  + +   I +  V++   + K  + D   ++ ++ 
Sbjct: 404 ALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLID 463

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   L+SAL + E M   G + +   Y + +   C+ GK +E N   +EM   G +P
Sbjct: 464 GYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 523

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N+LIE   K  ++EE+     +M    L+P   +FN +I   C  G+   A  + 
Sbjct: 524 NAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLF 583

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               +KG+S    T++ LIG Y+ +  +Q   K++ EM  K   P L  Y  L+  LC+ 
Sbjct: 584 QKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKA 643

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             ++ A  +   M S   VP +  +  ++ +       ++A+ +   MV  G+ P
Sbjct: 644 ANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 169/370 (45%), Gaps = 3/370 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            VA  + R L +RG      ++ T++  +           ++  ML    +P+ AT   +
Sbjct: 158 HVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNV 217

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + ALC+ G +     +L ++  +  S         I  + ++ R+EE + L++RM    +
Sbjct: 218 LHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYV 276

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ ++    K   ++ A      M+ +G   + F Y T I  YC+ G ++EA  
Sbjct: 277 APDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATE 336

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+++    G  P   T+  LI G      IE +L    +  ++ L P    +N +++ LC
Sbjct: 337 LLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLC 396

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A  ++   +++G  P+  TY+ +I G  K G I +   +  +   K   P + 
Sbjct: 397 RQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVF 456

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH-LCEE 363
            + +LI   C+  KL+ A +  + M ++ + P V  Y S++   L K  KAK ++   EE
Sbjct: 457 TFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN-GLCKAGKAKEVNETFEE 515

Query: 364 MVSEGLKPST 373
           M+ +G +P+ 
Sbjct: 516 MILKGCRPNA 525



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 149/343 (43%), Gaps = 36/343 (10%)

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A  + G+L+  VD  +R+    C P      +++  ++     ++   +  RML   +
Sbjct: 78  IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137

Query: 125 IHDTIAYS-------LIVYAKVKMRNLES----------------------------ALV 149
             D   ++       L     V +R L S                            A  
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +++EML R    +   +   + A C+ G + E+  L+ ++   G+     T N+ I G  
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC 257

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +  R+EE+++  E+M +  + P    +N ++R LC+    ++A   L   +++G  P++ 
Sbjct: 258 EDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDF 316

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ +I GY K G +QE  +L  +  +K   P    Y SLI+ LC  G +E A + F   
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++  L P + +Y SLV     +G    AL +  EMV EG  P 
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPD 419



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 1/249 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ I+ A V     + A  VY  ML  G + ++  +T  + ++C  G+   A  L++ +
Sbjct: 108 AYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSL 167

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G       +  ++ G         +    ++M+ R + P  + FN ++  LC+ G+ 
Sbjct: 168 SERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDV 227

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            ++  +L   L +G S N+ T +  I G  ++G ++E + L   M    ++P +  Y +L
Sbjct: 228 MESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG-AYVAPDVVTYNTL 286

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC+  K++EA +Y   M +   +P    Y +++  + + G   +A  L ++ V +G 
Sbjct: 287 MRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGF 346

Query: 370 KPSTSYLCS 378
            P     CS
Sbjct: 347 VPDRVTYCS 355



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/174 (18%), Positives = 73/174 (41%), Gaps = 1/174 (0%)

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+  A+A R+  ++   E+M      P+  A+N ++  L       QA+ +    L  G 
Sbjct: 78  IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +P+  T++  +  +   G     L+L   +  +       AY +++  L   G    A  
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            F  M    + P V  + +++    +KG+  ++  L  +++  G+  +  + C+
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMS-ANKFTCN 250



 Score = 41.2 bits (95), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 3/149 (2%)

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT--YSHLIGGYAKEGEIQEVLK 289
           +  A+  +IR L   G     +  L  A     +P+ +   Y   I  YA+ G ++  + 
Sbjct: 34  TIPAYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVD 92

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
            +  M+  +  P  PAY +++ +L      ++A K +  M +  + P    +   +    
Sbjct: 93  AFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFC 152

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             G    AL L   +   G     +  C+
Sbjct: 153 LTGRPHVALRLLRSLSERGCDAKPAAYCT 181


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 181/404 (44%), Gaps = 36/404 (8%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEA 59
           M   ++ F V     ++G   + ++F TLI  +   ++  D V    + + ENI  PNE 
Sbjct: 120 MHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEV 179

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
              T+++ LCK G  Q   D+L  +      P     T +I    ++  ++    LL  M
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEM 239

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            +K++  D   YS ++ A  K+   E+   ++ EM+      N   + + I   C+ GK+
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 180 EEANCLMQEMENAGLKP------------------------YDE-----------TFNLL 204
           E+A  +M+ M   G+ P                        +D            ++N+L
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G A+ K+I+E++  C ++  + L PS    N ++  L E G  K A       L  G 
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  T+  L+GGY K G ++E +  ++++E +     +  YT++I  LC+ GKL++A  
Sbjct: 420 IPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHA 479

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            F+ +    L P V  Y +++  + ++G   +A  +  +M   G
Sbjct: 480 TFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 180/381 (47%), Gaps = 5/381 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEA 59
           ++  + AF + R + +     S+ SF+ L+  +        V  +++  +  +R P +E 
Sbjct: 50  VKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFRE-IHKLRIPVHEF 108

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN-TSLILRIIQEERIEEGMVLLKR 118
            +  ++++ C   +      +L  IH K+  P   V  T+LI  +  E ++++ + L K+
Sbjct: 109 ILSIVVNSCCLMHRTDLGFSVL-AIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKK 167

Query: 119 MLRKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           ++R+N+   + + Y  ++    K  + + A  +   M +     N+  YT  I A+C+ G
Sbjct: 168 LVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDG 227

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            ++ A  L+ EM+   + P   T++ LI+   K  + E   +   +M+   + P+   FN
Sbjct: 228 MLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFN 287

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I  LC+ G  + A  ++   ++KG  P+ ITY+ +I GY   G++    +++  M  K
Sbjct: 288 SVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINK 347

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           SI P + +Y  LI+   +  K++EA +  + +    L P +     L+    E G    A
Sbjct: 348 SIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSA 407

Query: 358 LHLCEEMVSEGLKPSTSYLCS 378
            +  +EM+S G  P     C+
Sbjct: 408 QNFFDEMLSAGHIPDLYTHCT 428



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/346 (21%), Positives = 153/346 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++Q+     + +++TLI  + K  + + V  ++  M+    YPN  T  ++I  LCK G+
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   +++  +  K   P VI    +I       +++    +   M+ K++  D I+Y++
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    + + ++ A+ V  E+ ++G   +       +    E G+ + A     EM +AG
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T   L+ G  K   +EE++S+  ++  R+   +   +  +I  LC+ G   +A+
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                    G  P+ ITY+ +I GY +EG + E   +  +ME          Y  ++   
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            +  K+ E   + + +   S        E L+ I  E  +  + +H
Sbjct: 539 LRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSITRKMH 584



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/223 (20%), Positives = 91/223 (40%), Gaps = 35/223 (15%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  VCR + Q+G   S+++ N L+H + +  R       +  ML     P+  T  TL+ 
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLG 431

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G                                    +EE M    ++ R+    
Sbjct: 432 GYFKNGL-----------------------------------VEEAMSHFHKLERRREDT 456

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ ++    K   L+ A   +E++   G   +   YT  I  YC+ G ++EA  ++
Sbjct: 457 NIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           ++ME+ G    + T+N+++ G  ++ ++ E  ++ E++  +  
Sbjct: 517 RKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSF 559


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 165/349 (47%), Gaps = 2/349 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLISALCKGGQLQTYVDM 80
           S+  F+ L+  ++K  + D+V  +++ M + +  P N  T   L++  C+  QL   +  
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++   SL+    + +R+ + + +  +M+      + + Y+ I+    K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            + +++AL +   M K G   +   Y + I   C  G+  +A  ++  M    + P   T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           FN LI+ C K  R+ E+  + E+M+ R L P    ++ +I  LC      +A  M    +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG  P+ +TYS LI GY K  +++  +KL+ EM  + +      YT LI   C+ GKL 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            A++ F+ M    + P +  Y  L+    + G   KAL +  +M   G+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 170/359 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   S+++F +L++   + DR      ++  M+     PN     T+I  LCK  Q+   
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L+R+      P V+   SLI  +    R  +   ++  M ++ +  D   ++ ++ A
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK   +  A   YEEM++R    +   Y+  I   C Y +++EA  +   M + G  P 
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI G  K+K++E  +    +M  R ++ +   +  +I+  C  G    A  +  
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +  G  PN ITY+ L+ G    G+I++ L +  +M+   +   +  Y  +I  +C+ G
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++ +A   +  +    L+P +  Y +++    +KG + +A  L  +M  +G+ P+  Y+
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 144/330 (43%), Gaps = 35/330 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +E+ G    ++++N+LI  +  S R     R+   M +   YP+  T   LI 
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K G++    +  + +  +   P ++  + LI  +    R++E   +   M+ K    
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS+++    K + +E  + ++ EM +RG   N+  YT  I  YC  GK+  A  + 
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G+ P   T+N+L+ G     +IE++L     M                      
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM---------------------- 422

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               Q NGM           + +TY+ +I G  K GE+ +   +Y  +  + + P +  Y
Sbjct: 423 ----QKNGM---------DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           T+++  L + G   EAD  F+ MK   ++P
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILP 499



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 146/321 (45%), Gaps = 4/321 (1%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPM-VIVNTSLILRIIQE-ERIEEG 112
           Y N +  R ++    +  +L   +D+    H  +C P+  I + S +L  I + ++ +  
Sbjct: 43  YSNGSDYREMLRNGIRFMKLDDSLDLF--FHMVQCRPLPSIADFSRLLSAISKMKKYDVV 100

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           + L ++M    + H+    ++++    +   L  AL    +M+K G   +   + + +  
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           +C   ++ +A  +  +M   G KP    +N +I+G  K+K+++ +L    +M    + P 
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +N +I  LC  G    A  M++    +   P+  T++ LI    KEG + E  + Y 
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM  +S+ P +  Y+ LI  LC   +L+EA++ F  M S    P V  Y  L+  + +  
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340

Query: 353 NKAKALHLCEEMVSEGLKPST 373
                + L  EM   G+  +T
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNT 361



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 100/254 (39%), Gaps = 35/254 (13%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +R     + +FN LI    K  R       Y+ M+     P+  T   LI  LC   +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    +M   +  K C P V+  + LI    + +++E GM L   M ++ ++ +T+ Y++
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366

Query: 134 IV--YAKVKMRN---------------------------------LESALVVYEEMLKRG 158
           ++  Y +    N                                 +E ALV+  +M K G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
             A+   Y   I   C+ G++ +A  +   +   GL P   T+  ++ G  K     E+ 
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486

Query: 219 SYCEQMMSRKLLPS 232
           +   +M    +LP+
Sbjct: 487 ALFRKMKEDGILPN 500


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 175/407 (42%), Gaps = 39/407 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A ++  +++ +G    + ++N LIH + +S+R    + + + M + + +PNE T  T
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+     G++     +L+ +     SP  +   +LI   I E   +E + +   M  K 
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    ++Y +++    K    + A   Y  M + G       YT  I   C+ G ++EA 
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKR------------------------------ 213
            L+ EM   G+ P   T++ LI G  K  R                              
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523

Query: 214 -----IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                ++E++   E M+          FN ++  LC+ G   +A   +      G  PN 
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           +++  LI GY   GE  +   ++ EM      PT   Y SL+  LC+ G L EA+K+ K 
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643

Query: 329 MKSHSLVPGVD--IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +  H++   VD  +Y +L+    + GN AKA+ L  EMV   + P +
Sbjct: 644 L--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 167/366 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + + ++ R +   GF+ S+ + N ++  V KS  +  VW   + ML+    P+ AT  
Sbjct: 178 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 237

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+ LC  G  +    ++ ++     +P ++   +++    ++ R +  + LL  M  K
Sbjct: 238 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 297

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y+++++   +   +    ++  +M KR    N   Y T I  +   GK+  A
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L+ EM + GL P   TFN LI+G       +E+L     M ++ L PS  ++  ++  
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+      A G        G     ITY+ +I G  K G + E + L  EM    I P 
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y++LI+  C+ G+ + A +    +    L P   IY +L+      G   +A+ + E
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537

Query: 363 EMVSEG 368
            M+ EG
Sbjct: 538 AMILEG 543



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 148/316 (46%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N +    LI    + G +Q  +++   +     +P V    +++  +++          L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           K ML++ +  D   +++++       + E +  + ++M K G++     Y T +  YC+ 
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+ + A  L+  M++ G+     T+N+LI    ++ RI +       M  R + P+   +
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I      G    A+ +L   L  G SPN +T++ LI G+  EG  +E LK++Y ME 
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K ++P+  +Y  L+  LC+  + + A  ++  MK + +  G   Y  ++    + G   +
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461

Query: 357 ALHLCEEMVSEGLKPS 372
           A+ L  EM  +G+ P 
Sbjct: 462 AVVLLNEMSKDGIDPD 477



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 162/370 (43%), Gaps = 36/370 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F++A      +++ G  +  I++  +I  + K+   D    +   M ++   P+  T   
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK G+ +T  +++ RI+    SP                                
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSP-------------------------------- 511

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + I YS ++Y   +M  L+ A+ +YE M+  G + + F +   + + C+ GK+ EA 
Sbjct: 512 ---NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             M+ M + G+ P   +F+ LI G   +    ++ S  ++M      P+   +  +++ L
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ ++A   L        + + + Y+ L+    K G + + + L+ EM  +SI P  
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             YTSLIS LC+ GK   A  + K  ++  +++P   +Y   V    + G     ++  E
Sbjct: 689 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 748

Query: 363 EMVSEGLKPS 372
           +M + G  P 
Sbjct: 749 QMDNLGHTPD 758



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/465 (20%), Positives = 174/465 (37%), Gaps = 106/465 (22%)

Query: 12   RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
            R +   G   + +SF+ LI+    S      + ++  M +   +P   T  +L+  LCKG
Sbjct: 572  RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631

Query: 72   GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            G L+     L  +H    +   ++  +L+  + +   + + + L   M++++++ D+  Y
Sbjct: 632  GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691

Query: 132  S--------------LIVYAK----------------------VKMRNLESALVVYEEML 155
            +               I++AK                       K    ++ +   E+M 
Sbjct: 692  TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751

Query: 156  KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
              G + +       I  Y   GKIE+ N L+ EM N    P   T+N+L+ G +K K + 
Sbjct: 752  NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811

Query: 216  ESLSYCEQMMSRKLLP---SCSA--------------------------------FNEMI 240
             S      ++   +LP   +C +                                FN +I
Sbjct: 812  TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871

Query: 241  RRLCECGNAKQANGM------LTLALDK-----------------------------GFS 265
             + C  G    A  +      L ++LDK                             G S
Sbjct: 872  SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 931

Query: 266  PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            P    Y  LI G  + G+I+    +  EM    I P   A ++++ +L +CGK +EA   
Sbjct: 932  PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 991

Query: 326  FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             + M    LVP +  + +L+ +  + GN  +AL L   M + GLK
Sbjct: 992  LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 1036



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 101/213 (47%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           ++N  VY   I  Y   G I+++  + + M   G  P   T N ++    K+       S
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + ++M+ RK+ P  + FN +I  LC  G+ ++++ ++      G++P  +TY+ ++  Y 
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+G  +  ++L   M+ K +   +  Y  LI  LC+  ++ +     + M+   + P   
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +L+     +G    A  L  EM+S GL P+
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/332 (20%), Positives = 138/332 (41%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
            ++  G +  +++ N +I   ++  + +    +   M      PN  T   L+    K   
Sbjct: 750  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809

Query: 74   LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            + T   +   I      P  +   SL+L I +   +E G+ +LK  + + +  D   +++
Sbjct: 810  VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 869

Query: 134  IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            ++        +  A  + + M   G S +       +       + +E+  ++ EM   G
Sbjct: 870  LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929

Query: 194  LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            + P    +  LI G  +   I+ +    E+M++ K+ P   A + M+R L +CG A +A 
Sbjct: 930  ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 989

Query: 254  GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +L   L     P   +++ L+    K G + E L+L   M    +   L +Y  LI+ L
Sbjct: 990  LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049

Query: 314  CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            C  G +  A + ++ MK    +     Y++L+
Sbjct: 1050 CAKGDMALAFELYEEMKGDGFLANATTYKALI 1081



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 144/332 (43%), Gaps = 2/332 (0%)

Query: 46   YQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
            ++  ++N+ + P+  T   +I    + G+++   D+L  +  +   P +     L+    
Sbjct: 746  FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805

Query: 105  QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
            + + +    +L + ++   ++ D +    +V    +   LE  L + +  + RG   + +
Sbjct: 806  KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865

Query: 165  VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
             +   I   C  G+I  A  L++ M + G+    +T + ++    +  R +ES     +M
Sbjct: 866  TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925

Query: 225  MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
              + + P    +  +I  LC  G+ K A  +    +     P  +  S ++   AK G+ 
Sbjct: 926  SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985

Query: 285  QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
             E   L   M    + PT+ ++T+L+   C+ G + EA +   +M +  L   +  Y  L
Sbjct: 986  DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045

Query: 345  VGIHLEKGNKAKALHLCEEMVSEG-LKPSTSY 375
            +     KG+ A A  L EEM  +G L  +T+Y
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 125/292 (42%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +L ++N L+H  +K       + +Y+ ++ N   P++ T  +L+  +C+   L+  + +L
Sbjct: 793  NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852

Query: 82   DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
                 +           LI +      I     L+K M    +  D      +V    + 
Sbjct: 853  KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912

Query: 142  RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
               + + +V  EM K+G S  S  Y   I   C  G I+ A  + +EM    + P +   
Sbjct: 913  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972

Query: 202  NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            + ++   AK  + +E+      M+  KL+P+ ++F  ++   C+ GN  +A  +  +  +
Sbjct: 973  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 1032

Query: 262  KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             G   + ++Y+ LI G   +G++    +LY EM+          Y +LI  L
Sbjct: 1033 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 170/368 (46%), Gaps = 2/368 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V R +  R       +++TL+H +    R D    +   M     +PN      LIS
Sbjct: 19  AVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLIS 78

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G L     ++D +  K C P  +   SL+  +  + ++++ M LL RM+    + 
Sbjct: 79  ALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVP 138

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I +  +V   VK       + V   + ++G+  N F Y++ I    + GK E    L 
Sbjct: 139 NDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLW 198

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G KP    ++ LI+G  +  + +E+  Y  +M ++   P+   ++ ++    E 
Sbjct: 199 KEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEA 258

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +     D   + +E+ YS LI G  K G+++E L ++ +M  + I   + AY
Sbjct: 259 GDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAY 318

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHS--LVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +S+I   C    +E+  K F  M  H+  L P V  Y  L+     K + ++A+ +   M
Sbjct: 319 SSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTM 378

Query: 365 VSEGLKPS 372
           + +G  P 
Sbjct: 379 LDQGCDPD 386



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 134/268 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           ++L + +   +++ + + + M  +N + D   YS +++       ++ A+ + +EM   G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              N   +   I A C+ G +  A+ L+  M   G  P + T+N L+ G     ++++++
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S   +M++ K +P+   F  ++    + G A     +L    +KG+  NE +YS LI G 
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+ +  ++L+ EM  K   P    Y++LI  LC+ GK +EA +Y   MK+    P  
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVS 366
             Y SL+  + E G+  KA+ + +EM  
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEMTD 273



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/290 (17%), Positives = 113/290 (38%), Gaps = 58/290 (20%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE++G+  +  S+++LI  + K  + +   ++++ M+E    PN      LI  LC+ G+
Sbjct: 166 LEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGK 225

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSL---------------------------------- 99
                + L  +  K  +P     +SL                                  
Sbjct: 226 PDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSI 285

Query: 100 -ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML--K 156
            I  + +  +++E +++ K+ML + +  D +AYS +++     + +E  + ++ +ML   
Sbjct: 286 LINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHN 345

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY------------------- 197
                +   Y   + A+C    +  A  ++  M + G  P                    
Sbjct: 346 PKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQ 405

Query: 198 --DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
              E  + L+    K +R   + +  E M+ + LLP  S +   +++LC+
Sbjct: 406 DGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCK 455


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 184/421 (43%), Gaps = 56/421 (13%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  R +  RGFS S+ + N ++  + K    DL W  ++ M+ N   PN AT   L++
Sbjct: 128 AVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLN 187

Query: 67  AL-----------------------------------CKGGQLQTYVDMLDRIHGKRCSP 91
           AL                                   CK G+ +   +++D +  K  + 
Sbjct: 188 ALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAA 247

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH-DTIAYSLIVYAKVKMRNLESALVV 150
            V     LI  + ++ R  +G ++L+RM RKNM++ + I Y+ ++   VK   +  A  V
Sbjct: 248 DVCTYNVLIDDLCRKSRSAKGYLILRRM-RKNMVYPNEITYNTLINGLVKEGKIGVATKV 306

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           +EEM       NS  Y T I  +C  G IEEA  L   M + GL+P + T+  L+ G +K
Sbjct: 307 FEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISK 366

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA----NGMLTLA------- 259
             +     S  E+M    +     ++  MI  LC+ G  ++A    + ML ++       
Sbjct: 367 HAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVT 426

Query: 260 --------LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
                   L  G  PN + +S LI  Y K G ++E L  Y  M            + L++
Sbjct: 427 FSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVA 486

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           S C+CG+LEEA+ +   M    L P    ++ ++  +   G+  KA  + ++M S G  P
Sbjct: 487 SFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLP 546

Query: 372 S 372
           S
Sbjct: 547 S 547



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 167/402 (41%), Gaps = 54/402 (13%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRT 63
           E A  +C  +   G   + +++  L++ ++K  +  LV  + + M ++ +R     +  T
Sbjct: 336 EEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRV-GHISYTT 394

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LCK G L+  V +LD +     SP ++  +                VL+   L+  
Sbjct: 395 MIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFS----------------VLVNGFLKTG 438

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + + +S ++Y   KM NL+ AL  Y  M + G  ++ F  +  + ++C  G++EEA 
Sbjct: 439 LVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAE 498

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS----------- 232
             +  M   GL P   TF+ +I+    +    ++ S  ++M S   LPS           
Sbjct: 499 YFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGL 558

Query: 233 ------------------------CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                                    + +N M+      GN   A  +L   +   F P+ 
Sbjct: 559 LIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDS 618

Query: 269 ITYSHLIGGYAKEGEIQEVLKLY-YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            TY+ LI G  ++G++   L L    +E   +SP    YTSL+  L + G  + A   F+
Sbjct: 619 FTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFE 678

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            M +  + P    +  L+  +  KG  +K   +   M S  L
Sbjct: 679 DMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSL 720



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 155/345 (44%), Gaps = 6/345 (1%)

Query: 9    DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
            D+   +  R    +L ++N L+H  +K        ++Y  M+ +   P+  T  +LI   
Sbjct: 710  DILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGY 769

Query: 69   CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
            CK G L   V  L +I  +           L+ ++ +   I+    L+K++    +  + 
Sbjct: 770  CKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNV 829

Query: 129  IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
              Y+ +    V+  + + A  +   +L+ G++     +TT I   C  G ++ A  L  E
Sbjct: 830  DTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDE 889

Query: 189  MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
            M+  G+       + +I G A++++ +E+      M+  +++P+ + F  ++   C+ GN
Sbjct: 890  MKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGN 949

Query: 249  AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              +A  + ++        +   Y+ LI G   +G+IQ   KLY EME + I P    Y  
Sbjct: 950  VAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIV 1009

Query: 309  LISS-LCQCGKLEEADKYFKIMKSHSLVP-----GVDIYESLVGI 347
            LI S LC    + E++K  + +++  L+      G++I   L+ I
Sbjct: 1010 LIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGGIEILNELLMI 1054



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 20/250 (8%)

Query: 114 VLLKRMLRKNMIHDTI-AYSLIVY---------------AKVKMRNLESALVVYEEMLKR 157
           +L++  LR+NM+ D + A+ L+ +               + VK R ++     ++EM+  
Sbjct: 114 LLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIAN 173

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
             S N   +   + A CE GK + A  L+++M+  G  P   T+N L+    K  R + +
Sbjct: 174 RVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAA 233

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL-ALDKGFS-PNEITYSHLI 275
               + M S+ +      +N +I  LC    ++ A G L L  + K    PNEITY+ LI
Sbjct: 234 SELIDAMASKGIAADVCTYNVLIDDLCR--KSRSAKGYLILRRMRKNMVYPNEITYNTLI 291

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  KEG+I    K++ EM   ++ P    Y +LI   C  G +EEA +   +M SH L 
Sbjct: 292 NGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLR 351

Query: 336 PGVDIYESLV 345
           P    Y +L+
Sbjct: 352 PNEVTYGALL 361



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 143/305 (46%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN A   +L+  L K G  +  + M + +  +   P  I    L+ R  ++ ++ +   +
Sbjct: 652 PNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDI 711

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M  +++  +   Y+++++   K   +     +Y EM+  GF+ +   + + I  YC+
Sbjct: 712 LSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCK 771

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G ++ A   ++++   G K    T N+L+    +   I+ +    +Q+    + P+   
Sbjct: 772 SGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDT 831

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +        +  +A  +L   L+ G++P    ++ LI G  + G ++  ++L  EM+
Sbjct: 832 YNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMK 891

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              +S    A +++I  L +  K +EA +   IM    ++P V  + +L+  + ++GN A
Sbjct: 892 ILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVA 951

Query: 356 KALHL 360
           KAL L
Sbjct: 952 KALEL 956



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 137/337 (40%), Gaps = 39/337 (11%)

Query: 55  YP----NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE 110
           YP    N A    LI    +   +   V+    +  +  SP V     ++  ++++  ++
Sbjct: 102 YPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVD 161

Query: 111 EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI 170
                 K M+   +  +   +++++ A  +    +SA V+  +M + G    +  Y T +
Sbjct: 162 LFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLL 221

Query: 171 GAYCEYGKIEEANCLMQEMENAGLK----------------------------------- 195
             YC+ G+ + A+ L+  M + G+                                    
Sbjct: 222 NWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVY 281

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P + T+N LI G  K  +I  +    E+M    LLP+   +N +I   C  GN ++A  +
Sbjct: 282 PNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRL 341

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             + +  G  PNE+TY  L+ G +K  +   V  +   M    +     +YT++I  LC+
Sbjct: 342 CDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCK 401

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            G LEEA +    M   S+ P +  +  LV   L+ G
Sbjct: 402 NGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTG 438



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/323 (21%), Positives = 139/323 (43%), Gaps = 2/323 (0%)

Query: 44  RIYQHMLENIRYPNEATI-RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           +I+ H   +I Y   +T   T+++   + G L   V +LD +      P     TSLI  
Sbjct: 568 KIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAG 627

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIA-YSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           + ++ ++   ++L  R + K ++    A Y+ +V   +K  + ++AL ++E+ML  G   
Sbjct: 628 LCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQP 687

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           ++  +   +  Y   GK+ + N ++  M +  L     T+N+L+ G +K   +       
Sbjct: 688 DAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLY 747

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            +M+     P    ++ +I   C+ G+   A   L     +GF  +  T + L+    + 
Sbjct: 748 NEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCER 807

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
            EI+    L  ++    ++P +  Y SL +   +    +EA      +  +   P    +
Sbjct: 808 NEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQF 867

Query: 342 ESLVGIHLEKGNKAKALHLCEEM 364
            +L+      GN   A+ L +EM
Sbjct: 868 TTLIRGMCRMGNVKGAMELQDEM 890



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 100/227 (44%), Gaps = 1/227 (0%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            ++AFD+ + L   G + ++ ++N+L +   ++   D    I   +LEN   P      TL
Sbjct: 811  KMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTL 870

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            I  +C+ G ++  +++ D +     S   +  +++I  + +  + +E   +L  ML   +
Sbjct: 871  IRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQI 930

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
            I     ++ +++   K  N+  AL +   M +     +   Y   I   C  G I+ A  
Sbjct: 931  IPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFK 990

Query: 185  LMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLL 230
            L +EME   + P    + +LI+        I ES      + +R+L+
Sbjct: 991  LYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELM 1037


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 176/370 (47%), Gaps = 7/370 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   + ++FN L++  +K  R     R+ + M      PN  +   L+  LCK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 74  L----QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
                +   DM+ R  G R +P ++  ++L+    +  ++EE   LLK ++ + +  D +
Sbjct: 61  WHEAEELVRDMISR--GGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL 118

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ +V +  K   L  AL + EEM++ G       + T I   C    +E A+ L+Q+M
Sbjct: 119 MYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM 178

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
             +G+K    T+N L++G  KA R++E+    E+M +    P   A++  +  LC+ G  
Sbjct: 179 AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKV 238

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTS 308
             A+ +L    D    PN +TY+ ++ G  K G+I   L++  +M         +  Y++
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           ++  LC+ G+ +EA    + M      P V  Y SLV    + G   +A+    EM  EG
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 369 LKPSTSYLCS 378
            KP+    CS
Sbjct: 359 CKPNAVTYCS 368



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 176/358 (49%), Gaps = 12/358 (3%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           +++++TL+    K+ + +    + + ++     P+      ++++LCK  +L   +++L+
Sbjct: 82  MVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLE 141

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +    C P +I   +LI    +E+ +E    LL++M    +  D + Y+ ++    K  
Sbjct: 142 EMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAG 201

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            L+ A  + E M   G + +   Y++F+   C+ GK+ +A+ ++++M ++   P   T+N
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS----AFNEMIRRLCECGNAKQANGMLTL 258
            +++G  K+ +I+ +L   EQM S      C      ++ ++  LC+ G  ++A  ++  
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSD---GCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
               G  P+ +TYS L+ G  K G+I+E ++   EM  +   P    Y SL+  LC CG+
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 319 LEEADKYFKIMKSHSLV-----PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           L EA++  + M S         P V  Y +L+G   + G    AL   + M S+G  P
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 10/337 (2%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG     + +  ++  + KS R      + + M+     P   T  TLIS  C+   L+ 
Sbjct: 111 RGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L ++        V+   +L+  + +  R++E   LL+RM       D +AYS  VY
Sbjct: 171 ADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM---ENAG 193
              K   +  A  V E+M       N   Y T +   C+ GKI+ A  +M++M   +  G
Sbjct: 231 GLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L      ++ +++G  K  R +E+ S  E M      P    ++ ++  LC+ G  ++A 
Sbjct: 291 LNVVG--YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV 348

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-----EYKSISPTLPAYTS 308
             +     +G  PN +TY  L+ G    G + E  ++  EM           P++  Y +
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNA 408

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           LI  LC+ G++++A K+F+ M+S    P    Y ++V
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIV 445


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 167/349 (47%), Gaps = 1/349 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N ++  +  +  +D   ++Y  ML     P+  T    I + C  G+    + +L  +
Sbjct: 12  AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             + C    +   +++  +       +   L   MLR+++  D   ++ +++A  +  ++
Sbjct: 72  PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             +  +  ++LKRG S N F    +I   CE G++EEA  L++ M+ A + P   T+N L
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD-AYIAPDVVTYNTL 190

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G  K  +++E+  Y  +MM++  +P    +N +I   C+    ++A  +L  A+ KGF
Sbjct: 191 MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGF 250

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ +TY  LI G   EG+++  L+L+ E + K + P L  Y SL+  LC+ G +  A +
Sbjct: 251 VPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQ 310

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
               M      P +  Y  ++    + GN + A  +  + + +G  P  
Sbjct: 311 VMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 158/351 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++NTL+  + K  +     +  + M+     P++ T  T+I   CK   LQ   ++L
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
                K   P  +   SLI  +  E  +E  + L      K++  D + Y+ +V    + 
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  AL V  EM++ G   + + Y   I   C+ G I +A  +M +    G  P   TF
Sbjct: 303 GLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 362

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +I+G  K  +++ +L   E+M    + P    +N ++  LC+ G AK+ N      + 
Sbjct: 363 NTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMIL 422

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI  + K  +++E   +   M    + P   ++ +LI   C+ G L+ 
Sbjct: 423 KGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDG 482

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A   F+ +         D +  L+G +  K N   A  +  EM+S+G KP 
Sbjct: 483 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 533



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 169/363 (46%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +  +G      ++NT+I    K D       + +  +     P+  T  +LI+ LC  
Sbjct: 208 RRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAE 267

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G ++  +++ +    K   P ++V  SL+  + ++  I   + ++  M+      D   Y
Sbjct: 268 GDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTY 327

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++    KM N+  A VV  + + +G+  + F + T I  YC+  K++ A  L++ M  
Sbjct: 328 NIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWM 387

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+N ++ G  KA + +E     E+M+ +   P+   +N +I   C+    ++
Sbjct: 388 YGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 447

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A+G++      G  P+ I+++ LI G+ + G++     L+ +++ K  S T   +  LI 
Sbjct: 448 ASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 507

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           +      ++ A+K F  M S    P +  Y  LV    +  N  +A     EMVS+G  P
Sbjct: 508 AYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVP 567

Query: 372 STS 374
           S +
Sbjct: 568 SMA 570



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 5/360 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLV--WRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +R     + +FN ++H + +  + D++    +   +L+     N+ T    I  LC+GG+
Sbjct: 108 RRDVFPDVATFNNVLHALCQ--KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGR 165

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  V +++ +     +P V+   +L+  + ++ +++E    L+RM+ +  I D   Y+ 
Sbjct: 166 LEEAVALVESMDA-YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNT 224

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    K   L+ A  + ++ + +GF  +   Y + I   C  G +E A  L  E +   
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           LKP    +N L++G  +   I  +L    +M+     P    +N +I  LC+ GN   A 
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++  A+ KG+ P+  T++ +I GY K  ++   L+L   M    I+P    Y S+++ L
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ GK +E ++ F+ M      P    Y  L+    +     +A  +   M  +GL P T
Sbjct: 405 CKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDT 464



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 157/355 (44%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF    +++ +LI+ +      +    ++         P+     +L+  LC+ G +  
Sbjct: 248 KGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 307

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +++ +    C P +     +I  + +   I +  V++   + K  + D   ++ ++ 
Sbjct: 308 ALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMID 367

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   L+SAL + E M   G + ++  Y + +   C+ GK +E N   +EM   G +P
Sbjct: 368 GYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP 427

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N+LIE   K  ++EE+     +M    L+P   +FN +I   C  G+   A  + 
Sbjct: 428 NAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLF 487

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               +KG+S    T++ LIG Y+ +  +Q   K++ EM  K   P L  Y  L+   C+ 
Sbjct: 488 QKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKA 547

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             ++ A  +   M S   VP +  +  ++         ++A+ +   MV  G+ P
Sbjct: 548 ANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/364 (20%), Positives = 160/364 (43%), Gaps = 4/364 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++    + +     L+ +N+L+  + +        ++   M+E+  +P+  T   +
Sbjct: 271 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIV 330

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G +     +++    K   P V    ++I    +  +++  + L++RM    +
Sbjct: 331 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGI 390

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I Y+ ++    K    +     +EEM+ +G   N+  Y   I  +C+  ++EEA+ 
Sbjct: 391 APDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 450

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++  M   GL P   +FN LI G  +   ++ +    +++  +    +   FN +I    
Sbjct: 451 VIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 510

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              N + A  +    + KG+ P+  TY  L+ G  K   +        EM  K   P++ 
Sbjct: 511 SKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMA 570

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +  +++SL    ++ EA     IM    +VP  ++ ++++    +K   A    L EE+
Sbjct: 571 TFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP--EVVDTILST--DKKEIAAPKILVEEL 626

Query: 365 VSEG 368
           + +G
Sbjct: 627 MKKG 630



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 118/249 (47%), Gaps = 1/249 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ I+ A V     + A  VY  ML  G + ++  +T  I ++C  G+   A  L++ +
Sbjct: 12  AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G       +  ++ G        ++    ++M+ R + P  + FN ++  LC+ G+ 
Sbjct: 72  PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            ++  +L   L +G S N+ T +  I G  + G ++E + L   M+   I+P +  Y +L
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD-AYIAPDVVTYNTL 190

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC+  K++EA +Y + M +   +P    Y +++  + ++    +A  L ++ + +G 
Sbjct: 191 MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGF 250

Query: 370 KPSTSYLCS 378
            P     CS
Sbjct: 251 VPDRVTYCS 259


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 156/324 (48%), Gaps = 3/324 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN     TLI   CK G+++   D+   +            T LI  + +    ++G  +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            ++M    +  +   Y+ ++    K    + A  V++EM +RG S N   Y T IG  C 
Sbjct: 256 YEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K  EAN +M +M++  + P   T+N LI+G     ++ ++LS C  + SR L PS   
Sbjct: 316 EMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++   C  G+   A  M+    ++G  P+++TY+ LI  +A+   ++  ++L   ME
Sbjct: 376 YNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P +  Y+ LI   C  G++ EA + FK M    L P   IY +++  + ++G+  
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSY 495

Query: 356 KALHLCEEMVSEGLKP---STSYL 376
           +AL L  +M  + L P   S SYL
Sbjct: 496 RALRLFRDMEEKELAPNVASYSYL 519



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 163/336 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A D+   + + G   +  ++  LIH + K+      + +Y+ M E+  +PN  T   +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV 274

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++ LCK G+ +    + D +  +  S  ++   +LI  + +E +  E   ++ +M    +
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVI 334

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + I Y+ ++     +  L  AL +  ++  RG S +   Y   +  +C  G    A  
Sbjct: 335 NPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAK 394

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++EME  G+KP   T+ +LI+  A++  +E ++     M    L+P    ++ +I   C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFC 454

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A+ +    ++K   PNE+ Y+ +I GY KEG     L+L+ +ME K ++P + 
Sbjct: 455 IKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVA 514

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           +Y+ LI  LC+  KL+EA+   + M    + P   I
Sbjct: 515 SYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTI 550



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 164/366 (44%), Gaps = 19/366 (5%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL---------IS 66
            +GF      FN L+  V  S   +  W  +          NE+ I+ +         I 
Sbjct: 122 DKGFVPGSNCFNNLLTFVVGSSSFNQWWCFF----------NESKIKVVLDVYSFGIVIK 171

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+++   D+L  +     SP V++ T+LI    ++  IE+   L   M +  ++ 
Sbjct: 172 GCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVA 231

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+++++   K    +    +YE+M + G   N + Y   +   C+ G+ ++A  + 
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVF 291

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+     T+N LI G  +  +  E+    +QM S  + P+   +N +I   C  
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSV 351

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +      +G SP+ +TY+ L+ G+ ++G+     K+  EME + I P+   Y
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI +  +   +E A +    M+   LVP V  Y  L+     KG   +A  L + MV 
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471

Query: 367 EGLKPS 372
           + L+P+
Sbjct: 472 KMLEPN 477



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 34/276 (12%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANS--------------------------- 163
           Y +I+ A V+ ++L+S++  + EM+ +GF   S                           
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 164 -------FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
                  + +   I   CE G+IE++  L+ E+   G  P    +  LI+GC K   IE+
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +     +M    L+ +   +  +I  L + G  KQ   M     + G  PN  TY+ ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K+G  ++  K++ EM  + +S  +  Y +LI  LC+  K  EA+K    MKS+ + P
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINP 336

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  Y +L+      G   KAL LC ++ S GL PS
Sbjct: 337 NLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPS 372



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 133/282 (47%), Gaps = 1/282 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + +RG S +++++NTLI  + +  + +   ++   M   +  PN  T  TLI 
Sbjct: 287 AFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLID 346

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+L   + +   +  +  SP ++    L+    ++        ++K M  + +  
Sbjct: 347 GFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y++++    +  N+E+A+ +   M + G   +   Y+  I  +C  G++ EA+ L 
Sbjct: 407 SKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M    L+P +  +N +I G  K      +L     M  ++L P+ ++++ +IR LC+ 
Sbjct: 467 KSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKE 526

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
              K+A  ++   +D G  P++ T  +LI     +  + +++
Sbjct: 527 RKLKEAEDLVEKMIDSGIDPSD-TICNLISRAKTDSPVAQII 567



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 1/207 (0%)

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           S +Y   I AY +   ++ +     EM + G  P    FN L+     +    +   +  
Sbjct: 94  SRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN 153

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +   + +L   S F  +I+  CE G  +++  +L    + GFSPN + Y+ LI G  K+G
Sbjct: 154 ESKIKVVLDVYS-FGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           EI++   L++EM    +      YT LI  L + G  ++  + ++ M+ H + P +  Y 
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYN 272

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGL 369
            ++    + G    A  + +EM   G+
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGV 299



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 62/135 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +E+ G    + +++ LIH      + +   R+++ M+E +  PNE    T+
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK G     + +   +  K  +P V   + LI  + +E +++E   L+++M+   +
Sbjct: 485 ILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544

Query: 125 IHDTIAYSLIVYAKV 139
                  +LI  AK 
Sbjct: 545 DPSDTICNLISRAKT 559


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +++ G    L   NT IHV+   +R D   R  + M      PN  T   LI 
Sbjct: 251 AMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIK 310

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMI 125
             C   +L+  ++++  +  K CSP  I   +++  + +E+RI+E  +L+++ML+  N++
Sbjct: 311 GYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLL 370

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+  V+   K  + + AL    E  +R F  +   Y+  + ++C  G++++A  +
Sbjct: 371 PDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEI 430

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM + G  P   T+  +I G  + ++++++     QM      P+  ++  ++  LC+
Sbjct: 431 VNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK 490

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN+ +A  M+ ++ +  + PN ITYS L+ G+ +EG+  E   L  EM  K   PT   
Sbjct: 491 NGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVE 550

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
              LI SLCQ  K++EA ++ +   ++     V  + +++    +K +   AL L ++M 
Sbjct: 551 INLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 610

Query: 366 SEGLKPST 373
                P  
Sbjct: 611 LSNKHPDV 618



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 167/364 (45%), Gaps = 1/364 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIR 62
            E A ++   +  +G S   IS+ T++  + K  R   V  + + ML++    P++ T  
Sbjct: 318 LEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYN 377

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T +  L K G     ++ L     +R     +  ++++    +E R+++   ++  M  K
Sbjct: 378 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 437

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             I D + Y+ ++    + R ++ A  +  +M K G   N+  YT  +   C+ G   EA
Sbjct: 438 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 497

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +M   E     P   T+++L+ G  +  +  E+     +M+ +   P+    N +I+ 
Sbjct: 498 REMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQS 557

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A   +   L+ G + N + ++ +I G+ ++ +++  L L  +M   +  P 
Sbjct: 558 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 617

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT++I +L + G++EEA K    M    L+P    Y +++  +   G     L L E
Sbjct: 618 VVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLE 677

Query: 363 EMVS 366
           +M+S
Sbjct: 678 KMLS 681



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 158/334 (47%), Gaps = 6/334 (1%)

Query: 40  DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           D  WR Y+H  + IR P EA    ++S   + G+L+  + +L  +      P + +  + 
Sbjct: 219 DRQWR-YRH--DPIRRP-EAFGYVMVS-YSRAGKLRNAMRVLTMMQKAGIEPDLSICNTA 273

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           I  ++   R+++ +  L+RM    +  + I Y+ ++     +  LE A+ +  EM  +G 
Sbjct: 274 IHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGC 333

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           S +   Y T +G  C+  +I+E   LM++M +++ L P   T+N  +   +K    +E+L
Sbjct: 334 SPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEAL 393

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            +  +   R+       ++ ++   C  G   +A  ++     KG  P+ +TY+ +I G 
Sbjct: 394 EFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGL 453

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            +E ++ +  K+  +M      P   +YT+L++ LC+ G   EA +   + +    +P  
Sbjct: 454 CQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNA 513

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  L+     +G  ++A  L  EM+ +G  P+
Sbjct: 514 ITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 547



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/330 (21%), Positives = 154/330 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ EV   + + L+        +++NT +H+++K    D      +   E     ++   
Sbjct: 352 RIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGY 411

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             ++ + C+ G++    ++++ +  K C P V+  TS+I  + QE ++++   +L++M +
Sbjct: 412 SAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK 471

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                +T++Y+ ++    K  N   A  +     +  +  N+  Y+  +  +   GK  E
Sbjct: 472 HGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSE 531

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++EM   G  P     NLLI+   + ++++E+  + EQ ++     +   F  +I 
Sbjct: 532 ACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIH 591

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+  + + A  +L         P+ +TY+ +I    K+G I+E  KL  +M    + P
Sbjct: 592 GFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIP 651

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           T   Y ++I   C+ G++E+  K  + M S
Sbjct: 652 TPVTYRTVIHQYCRMGRVEDLLKLLEKMLS 681



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 6/325 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEAT 60
           R  + A  + R + + G   + +S+  L++ + K+  N L  R   +M E   + PN  T
Sbjct: 457 RKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG-NSLEAREMMNMSEEDWWIPNAIT 515

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+    + G+     D++  +  K   P  +    LI  + QEE+++E    +++ L
Sbjct: 516 YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCL 575

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 + + ++ +++   +  +LE+AL + ++M       +   YTT I A  + G+IE
Sbjct: 576 NNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 635

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-SAFNEM 239
           EA  L  +M   GL P   T+  +I    +  R+E+ L   E+M+SR+    C +A+N++
Sbjct: 636 EATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ---ECRTAYNQV 692

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I +LC  GN +QA  +L   L      +  T   LI  Y  +G       +   M  +++
Sbjct: 693 IEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNL 752

Query: 300 SPTLPAYTSLISSLCQCGKLEEADK 324
            P L     +   L   GK EEADK
Sbjct: 753 IPDLKLCEKVSKKLMLEGKSEEADK 777



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 118/256 (46%), Gaps = 11/256 (4%)

Query: 126 HDTI------AYSLIVYAKV-KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           HD I       Y ++ Y++  K+RN   A+ V   M K G   +  +  T I       +
Sbjct: 226 HDPIRRPEAFGYVMVSYSRAGKLRN---AMRVLTMMQKAGIEPDLSICNTAIHVLVMGNR 282

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +++A   ++ M+   ++P   T+N LI+G     R+E+++    +M  +   P   ++  
Sbjct: 283 LDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYT 342

Query: 239 MIRRLCECGNAKQANGMLTLAL-DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
           ++  LC+    K+   ++   L D    P+++TY+  +   +K G   E L+   E E +
Sbjct: 343 VMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER 402

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
                   Y++++ S C+ G++++A +    M S   +P V  Y S++    ++    +A
Sbjct: 403 RFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQA 462

Query: 358 LHLCEEMVSEGLKPST 373
             +  +M   G KP+T
Sbjct: 463 KKMLRQMYKHGCKPNT 478


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 177/365 (48%), Gaps = 7/365 (1%)

Query: 12  RYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           RYL    + G+     +FN+LI    ++++ D+   ++  M       +  +  TLI  L
Sbjct: 174 RYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGL 233

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G++   V++     G+   P + +  +L+  +   ER EEG+++L+RM        T
Sbjct: 234 CEAGRIDEAVELF----GEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPST 289

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            AY+ +V  + + R  + A  + +EM ++G +      T  I AYC+ G++ +A  +++ 
Sbjct: 290 RAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLEL 349

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M+  G KP   T+N L++G     ++ ++++   +M +  + P    +N +IR  C  G+
Sbjct: 350 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 409

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +L L    G   ++ TY+ LI    K+G   +   L+  +E + I P    + S
Sbjct: 410 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 469

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI+ LC+ GK + A K+ + M S    P    Y S +    +     + L    EM+ + 
Sbjct: 470 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 529

Query: 369 LKPST 373
           +KPST
Sbjct: 530 VKPST 534



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 172/371 (46%), Gaps = 17/371 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF + R +E  G      ++N LI+ + K  R D    ++  +      PN  T  +
Sbjct: 410 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 469

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LCK G+       L+++    C+P     +S I  + + +  +EG+  +  ML+K+
Sbjct: 470 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 529

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +   T+ Y+++++  +K RN       + EM+  G + +   YTT + AYC  G++ EA 
Sbjct: 530 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 589

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR-- 241
            ++ EM   G+      +N L++G A   + + ++S  +QM S   +P+   +  ++R  
Sbjct: 590 NVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 649

Query: 242 ---RLCE-------CGNAKQAN-----GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
              RL E        G  K        G+  +     F PN  TYS ++ G++++G  +E
Sbjct: 650 VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 709

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L   M+  SIS     YT+L++  C+  +  +A      M  H  +P +  Y+ L+ 
Sbjct: 710 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLS 769

Query: 347 IHLEKGNKAKA 357
             + +G   KA
Sbjct: 770 GLICEGQTDKA 780



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 163/361 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +++ G+  S  ++  ++    +  +      + Q M E    P   T   +I+A CK 
Sbjct: 278 RRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 337

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++   + +L+ +  + C P V    +L+     E ++ + M LL +M    +  D + Y
Sbjct: 338 GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTY 397

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           +L++  +    ++ESA  +   M   G  A+ + Y   I A C+ G+ ++A  L   +E 
Sbjct: 398 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 457

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+KP   TFN LI G  K+ + + +  + E+M+S    P    ++  I  LC+   +++
Sbjct: 458 RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 517

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
               +   L K   P+ + Y+ +I    KE     V + + EM     +P +  YT+ + 
Sbjct: 518 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 577

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           + C  G+L EA+     M  + +      Y +L+  H   G    A+ + ++M S    P
Sbjct: 578 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 637

Query: 372 S 372
           +
Sbjct: 638 N 638



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 155/368 (42%), Gaps = 4/368 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA D+   +  RGF+  ++S+ TLI  + ++ R D    ++  M +    P+      L
Sbjct: 205 DVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAAL 260

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LC   + +  + ML R+      P      +++    +E + +E   +L+ M  K +
Sbjct: 261 VKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGL 320

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               +  + ++ A  K   +  AL V E M  RG   N + Y   +  +C  GK+ +A  
Sbjct: 321 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 380

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ +M   G+ P   T+NLLI G      IE +      M    L+     +N +I  LC
Sbjct: 381 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 440

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   QA  +      +G  PN +T++ LI G  K G+     K   +M     +P   
Sbjct: 441 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 500

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+S I  LC+    +E   +   M    + P    Y  ++   L++ N         EM
Sbjct: 501 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 560

Query: 365 VSEGLKPS 372
           VS G  P 
Sbjct: 561 VSSGCNPD 568



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 4/280 (1%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           +P      ++I  + +   +   +  L  M+R     D   ++ ++    +   ++ A  
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++++M  RGF+ +   Y T I   CE G+I+EA  L  EM+    +P    +  L++G  
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLC 265

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
            A+R EE L    +M      PS  A+  ++   C    AK+A  ML    +KG +P  +
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           T + +I  Y KEG + + L++   M+ +   P +  Y +L+   C  GK+ +A      M
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           ++  + P    Y  L+      G+   A  L   M  +GL
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 425



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/387 (20%), Positives = 146/387 (37%), Gaps = 87/387 (22%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK--- 70
           LE RG   + ++FN+LI+ + KS + D+ W+  + M+     P+  T  + I  LCK   
Sbjct: 455 LETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 514

Query: 71  --------GGQLQTYVD--------------------MLDRIHGKR----CSPMVIVNTS 98
                   G  LQ  V                     ++ R  G+     C+P V+  T+
Sbjct: 515 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTT 574

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK-------------------- 138
            +     E R+ E   +L  M +  +  DT+AY+ ++                       
Sbjct: 575 SMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVA 634

Query: 139 ---------------VKMRNLESALVV-----------------YEEMLKRGFSANSFVY 166
                          V+MR +E  L +                 ++ M K  F  NS  Y
Sbjct: 635 SVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 694

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           ++ +  + E G+ EEA  L+  M+   +   ++ +  L+    K+KR  ++      M+ 
Sbjct: 695 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 754

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
              +P   ++  ++  L   G   +A  +   +  K +SP+EI +  +I G  K+G    
Sbjct: 755 HGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDI 814

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSL 313
             ++   +E  +  P+   Y  L   L
Sbjct: 815 SREMIIMLERMNCRPSHQTYAMLTEEL 841



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 4/181 (2%)

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           +A   P   T+N +I    +   +  +L Y   M+     P    FN +I   C      
Sbjct: 146 HAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVD 205

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +      +GF+ + ++Y+ LI G  + G I E ++L+ EM+     P +  Y +L+
Sbjct: 206 VARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALV 261

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             LC   + EE     + MK     P    Y ++V     +    +A  + +EM  +GL 
Sbjct: 262 KGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLA 321

Query: 371 P 371
           P
Sbjct: 322 P 322



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 8/145 (5%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P+   +N +IR LC   +  +A   L+L +  G+ P+  T++ LI GY +  ++     L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GI-H 348
           + +M  +  +  + +Y +LI  LC+ G+++EA + F  M      P + +Y +LV G+ +
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCN 266

Query: 349 LEKGNKAKALHLCEEMVSEGLKPST 373
            E+G   + L +   M   G +PST
Sbjct: 267 AERGE--EGLLMLRRMKELGWRPST 289


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 175/407 (42%), Gaps = 39/407 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A ++  +++ +G    + ++N LIH + +S+R    + + + M + + +PNE T  T
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+     G++     +L+ +     SP  +   +LI   I E   +E + +   M  K 
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    ++Y +++    K    + A   Y  M + G       YT  I   C+ G ++EA 
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKR------------------------------ 213
            L+ EM   G+ P   T++ LI G  K  R                              
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 214 -----IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                ++E++   E M+          FN ++  LC+ G   +A   +      G  PN 
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           +++  LI GY   GE  +   ++ EM      PT   Y SL+  LC+ G L EA+K+ K 
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603

Query: 329 MKSHSLVPGVD--IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +  H++   VD  +Y +L+    + GN AKA+ L  EMV   + P +
Sbjct: 604 L--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 167/366 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + + ++ R +   GF+ S+ + N ++  V KS  +  VW   + ML+    P+ AT  
Sbjct: 138 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 197

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+ LC  G  +    ++ ++     +P ++   +++    ++ R +  + LL  M  K
Sbjct: 198 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 257

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y+++++   +   +    ++  +M KR    N   Y T I  +   GK+  A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L+ EM + GL P   TFN LI+G       +E+L     M ++ L PS  ++  ++  
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+      A G        G     ITY+ +I G  K G + E + L  EM    I P 
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y++LI+  C+ G+ + A +    +    L P   IY +L+      G   +A+ + E
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 363 EMVSEG 368
            M+ EG
Sbjct: 498 AMILEG 503



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 148/316 (46%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N +    LI    + G +Q  +++   +     +P V    +++  +++          L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           K ML++ +  D   +++++       + E +  + ++M K G++     Y T +  YC+ 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+ + A  L+  M++ G+     T+N+LI    ++ RI +       M  R + P+   +
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I      G    A+ +L   L  G SPN +T++ LI G+  EG  +E LK++Y ME 
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K ++P+  +Y  L+  LC+  + + A  ++  MK + +  G   Y  ++    + G   +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 357 ALHLCEEMVSEGLKPS 372
           A+ L  EM  +G+ P 
Sbjct: 422 AVVLLNEMSKDGIDPD 437



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 162/370 (43%), Gaps = 36/370 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F++A      +++ G  +  I++  +I  + K+   D    +   M ++   P+  T   
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK G+ +T  +++ RI+    SP                                
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSP-------------------------------- 471

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + I YS ++Y   +M  L+ A+ +YE M+  G + + F +   + + C+ GK+ EA 
Sbjct: 472 ---NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             M+ M + G+ P   +F+ LI G   +    ++ S  ++M      P+   +  +++ L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ ++A   L        + + + Y+ L+    K G + + + L+ EM  +SI P  
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             YTSLIS LC+ GK   A  + K  ++  +++P   +Y   V    + G     ++  E
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708

Query: 363 EMVSEGLKPS 372
           +M + G  P 
Sbjct: 709 QMDNLGHTPD 718



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/465 (20%), Positives = 174/465 (37%), Gaps = 106/465 (22%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +   G   + +SF+ LI+    S      + ++  M +   +P   T  +L+  LCKG
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L+     L  +H    +   ++  +L+  + +   + + + L   M++++++ D+  Y
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 132 S--------------LIVYAK----------------------VKMRNLESALVVYEEML 155
           +               I++AK                       K    ++ +   E+M 
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
             G + +       I  Y   GKIE+ N L+ EM N    P   T+N+L+ G +K K + 
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771

Query: 216 ESLSYCEQMMSRKLLP---SCSA--------------------------------FNEMI 240
            S      ++   +LP   +C +                                FN +I
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831

Query: 241 RRLCECGNAKQANGM------LTLALDK-----------------------------GFS 265
            + C  G    A  +      L ++LDK                             G S
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P    Y  LI G  + G+I+    +  EM    I P   A ++++ +L +CGK +EA   
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            + M    LVP +  + +L+ +  + GN  +AL L   M + GLK
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 101/213 (47%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           ++N  VY   I  Y   G I+++  + + M   G  P   T N ++    K+       S
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + ++M+ RK+ P  + FN +I  LC  G+ ++++ ++      G++P  +TY+ ++  Y 
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+G  +  ++L   M+ K +   +  Y  LI  LC+  ++ +     + M+   + P   
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +L+     +G    A  L  EM+S GL P+
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/332 (20%), Positives = 138/332 (41%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
            ++  G +  +++ N +I   ++  + +    +   M      PN  T   L+    K   
Sbjct: 710  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769

Query: 74   LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            + T   +   I      P  +   SL+L I +   +E G+ +LK  + + +  D   +++
Sbjct: 770  VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829

Query: 134  IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            ++        +  A  + + M   G S +       +       + +E+  ++ EM   G
Sbjct: 830  LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889

Query: 194  LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            + P    +  LI G  +   I+ +    E+M++ K+ P   A + M+R L +CG A +A 
Sbjct: 890  ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949

Query: 254  GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +L   L     P   +++ L+    K G + E L+L   M    +   L +Y  LI+ L
Sbjct: 950  LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009

Query: 314  CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            C  G +  A + ++ MK    +     Y++L+
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALI 1041



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 146/338 (43%), Gaps = 5/338 (1%)

Query: 43   WRI---YQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
            W+    ++  ++N+ + P+  T   +I    + G+++   D+L  +  +   P +     
Sbjct: 700  WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759

Query: 99   LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
            L+    + + +    +L + ++   ++ D +    +V    +   LE  L + +  + RG
Sbjct: 760  LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819

Query: 159  FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
               + + +   I   C  G+I  A  L++ M + G+    +T + ++    +  R +ES 
Sbjct: 820  VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879

Query: 219  SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                +M  + + P    +  +I  LC  G+ K A  +    +     P  +  S ++   
Sbjct: 880  MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939

Query: 279  AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            AK G+  E   L   M    + PT+ ++T+L+   C+ G + EA +   +M +  L   +
Sbjct: 940  AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999

Query: 339  DIYESLVGIHLEKGNKAKALHLCEEMVSEG-LKPSTSY 375
              Y  L+     KG+ A A  L EEM  +G L  +T+Y
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1037



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 125/292 (42%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +L ++N L+H  +K       + +Y+ ++ N   P++ T  +L+  +C+   L+  + +L
Sbjct: 753  NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812

Query: 82   DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
                 +           LI +      I     L+K M    +  D      +V    + 
Sbjct: 813  KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872

Query: 142  RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
               + + +V  EM K+G S  S  Y   I   C  G I+ A  + +EM    + P +   
Sbjct: 873  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 202  NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            + ++   AK  + +E+      M+  KL+P+ ++F  ++   C+ GN  +A  +  +  +
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 262  KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             G   + ++Y+ LI G   +G++    +LY EM+          Y +LI  L
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 164/354 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF   ++++++LI  + K+   +    I QHM +    PN  T   +I   C  GQL+ 
Sbjct: 232 QGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEE 291

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            V +L ++ G    P V+    LI    +  R  E   +   M+RK    ++  Y ++++
Sbjct: 292 AVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLH 351

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  L     + + M++ G       +   I AY ++G +++A     EM   GL+P
Sbjct: 352 GYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRP 411

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              +++ +I    K  R+E+++ +  QM+S  L P+  +F  +I  LC  G  K+   + 
Sbjct: 412 DVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELA 471

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              +++G  P+ I  + ++    KEG + E    +  + +  + P + +Y +LI   C  
Sbjct: 472 FEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFV 531

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           GK++E+ K F  M S  L P    Y +L+  + + G    AL L  EM  + +K
Sbjct: 532 GKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVK 585



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 172/365 (47%), Gaps = 8/365 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           G+ +  ++ N LI  +    R +D +  +++ M E    P+  +   LI  LC   + Q 
Sbjct: 124 GWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 183

Query: 77  YVDMLDRIH-----GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            +++L  +H     G  CSP V+  +++I    +E  +++   L   M+ +    D + Y
Sbjct: 184 ALELL--LHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTY 241

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S ++    K + +  A  + + M  +G   N+  Y   I  YC  G++EEA  L+++M  
Sbjct: 242 SSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 301

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           +GL+P   T+ LLI+   K  R  E+ S  + M+ +   P+ + ++ ++      G    
Sbjct: 302 SGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALID 361

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
              +L L +  G       ++ LI  YAK G + + +  + EM    + P + +Y+++I 
Sbjct: 362 VRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIH 421

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+ G++E+A  +F  M S  L P +  + SL+      G   K   L  EM++ G+ P
Sbjct: 422 ILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 481

Query: 372 STSYL 376
              ++
Sbjct: 482 DAIFM 486



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 167/354 (47%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S +++S++T+I    K    D  + ++  M+     P+  T  +LI  LCK   +     
Sbjct: 200 SPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEA 259

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +L  +  K   P       +I       ++EE + LLK+M    +  D + Y L++    
Sbjct: 260 ILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYC 319

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K+     A  V++ M+++G   NS +Y   +  Y   G + +   L+  M   G+     
Sbjct: 320 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 379

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            FN+LI   AK   ++++++   +M    L P   +++ +I  LC+ G  + A       
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM 439

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           + +G SPN I+++ LI G    GE ++V +L +EM  + I P      +++ +LC+ G++
Sbjct: 440 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 499

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            EA  +F ++    + P V  Y +L+  +   G   +++   + MVS GL+P +
Sbjct: 500 VEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDS 553



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 157/345 (45%), Gaps = 2/345 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           + Q G    ++S++T+IH++ K  R  D V+   Q + E +  PN  +  +LI  LC  G
Sbjct: 404 MRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS-PNIISFTSLIHGLCSIG 462

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           + +   ++   +  +   P  I   +++  + +E R+ E       ++   +  + ++Y+
Sbjct: 463 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYN 522

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++     +  ++ ++  ++ M+  G   +S+ Y   +  Y + G++E+A  L +EM   
Sbjct: 523 TLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRK 582

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            +K    T N+++ G  +A RI  +     +M+ R        +N ++  LCE     +A
Sbjct: 583 DVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEA 642

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             M      K F  +  T++ +I    K G I E   L+  M  +   P +  Y+ +I S
Sbjct: 643 LRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKS 702

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
             + G LEE+D  F  M+ +       +   ++   LEKG+  +A
Sbjct: 703 RIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/364 (20%), Positives = 153/364 (42%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  + + +   G    ++++  LI    K  R      ++  M+   + PN      
Sbjct: 289 LEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHI 348

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+      G L    D+LD +              LI    +   +++ M     M +  
Sbjct: 349 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 408

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D ++YS +++   K+  +E A+  + +M+  G S N   +T+ I   C  G+ ++  
Sbjct: 409 LRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVE 468

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM N G+ P     N +++   K  R+ E+  + + ++   + P+  ++N +I   
Sbjct: 469 ELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGY 528

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   ++       +  G  P+  TY+ L+ GY K G +++ L LY EM  K +    
Sbjct: 529 CFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCA 588

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
                ++  L Q G++  A + +  M        ++ Y +++G   E     +AL + E+
Sbjct: 589 ITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFED 648

Query: 364 MVSE 367
           + S+
Sbjct: 649 LRSK 652



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 14/250 (5%)

Query: 147 ALVVYEEMLKRG---FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           A+ ++  M + G    +AN ++    I  +C  G+++ A          G +  + T N 
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 204 LIEGCAKAKRIEESLSYC-EQMMSRKLLPSCSAFNEMIRRLCECGNAKQA-NGMLTLALD 261
           LI+G    KR ++++     +M      P   ++N +I+ LC    +++A   +L +  D
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTAD 194

Query: 262 KGF--SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
            G+  SPN ++YS +I G+ KEGE+ +   L+ EM  +   P +  Y+SLI  LC+   +
Sbjct: 195 GGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAM 254

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST------ 373
            +A+   + M    ++P    Y  ++  +   G   +A+ L ++M   GL+P        
Sbjct: 255 NKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILL 314

Query: 374 -SYLCSASTC 382
             Y C    C
Sbjct: 315 IQYYCKIGRC 324



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 136/309 (44%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S ++ISF +LIH +        V  +   M+    +P+   + T++  LCK G++   
Sbjct: 443 GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEA 502

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D  D +      P V+   +LI       +++E +    RM+   +  D+  Y+ ++  
Sbjct: 503 QDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNG 562

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E AL +Y EM ++     +      +    + G+I  A  L  +M + G +  
Sbjct: 563 YFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLR 622

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            ET+N ++ G  +   ++E+L   E + S++       FN +I  L + G   +A  + +
Sbjct: 623 IETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFS 682

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G  P+ ITYS +I    +EG ++E   L+  ME    +        +I  L + G
Sbjct: 683 AMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKG 742

Query: 318 KLEEADKYF 326
            +  A  Y 
Sbjct: 743 DVRRAGTYL 751



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 136/332 (40%), Gaps = 40/332 (12%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF++      RG     I  NT++  + K  R       +  ++     PN  +  TL
Sbjct: 469 ELAFEMI----NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTL 524

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C  G++   +   DR+      P      +L+    +  R+E+ + L + M RK++
Sbjct: 525 IDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDV 584

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               I  ++I++   +   + +A  +Y +M+ RG       Y T +G  CE   ++EA  
Sbjct: 585 KFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALR 644

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP------------- 231
           + +++ +   +    TFN++I    K  RI+E+ S    M+ R  +P             
Sbjct: 645 MFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRI 704

Query: 232 ------------------SCSA----FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
                              C+A     N +IRRL E G+ ++A   LT   +K FS    
Sbjct: 705 EEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEAS 764

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           T + LI     E + Q+ +K   E  +  + P
Sbjct: 765 TAALLI-PIVSEKKYQKEVKFLPEKYHSFMQP 795


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 175/363 (48%), Gaps = 4/363 (1%)

Query: 4   FEVAFDV-CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TI 61
           F+ AF + C  L+ R    S++ F  ++ V+ K ++ D+V  +Y H +EN+   ++  + 
Sbjct: 60  FDDAFSLFCEMLQSRPIP-SIVDFTRVLTVIAKMNKFDIVIYLY-HKMENLGISHDLYSF 117

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C+  +L   + +L ++      P ++   SL+    Q  R +E + L+  M  
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              + + + Y+ ++    K R+L +AL V+  M K+G  A++  Y T I      G+  +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+++M    + P    F  LI+   K   + E+ +  ++M+ R ++P+   +N +I 
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  G    A  M  L + KG  P+ +TY+ LI G+ K   +++ +KL+ EM Y+ +  
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y +LI   CQ GKL  A K F  M    + P +  Y  L+      G   KAL + 
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417

Query: 362 EEM 364
           E++
Sbjct: 418 EDL 420



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 180/404 (44%), Gaps = 39/404 (9%)

Query: 8   FDVCRYL----EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FD+  YL    E  G S  L SF  LIH   +  R  L   +   M++    P+  T+ +
Sbjct: 95  FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSP-MVIVNT------------------------- 97
           L++  C+G + Q  V ++D + G    P +VI NT                         
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214

Query: 98  ---------SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
                    +LI  +    R  +   LL+ M+++ +  + I ++ ++   VK  NL  A 
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            +Y+EM++R    N F Y + I  +C +G + +A  +   M + G  P   T+N LI G 
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K+KR+E+ +    +M  + L+     +N +I   C+ G    A  +    +D G SP+ 
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           +TY+ L+      G+I++ L +  +++   +   +  Y  +I  LC+  KL+EA   F+ 
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +    + P    Y +++     KG + +A  LC  M  +G  PS
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 132/300 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   +E++G     +++NTLI  ++ S R     R+ + M++    PN      LI 
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G L    ++   +  +   P V    SLI        + +   +   M+ K    
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++    K + +E  + ++ EM  +G   ++F Y T I  YC+ GK+  A  + 
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M + G+ P   T+N+L++      +IE++L   E +   ++      +N +I+ LC  
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+A  +      KG  P+ I Y  +I G  ++G  +E  KL   M+     P+   Y
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 120/261 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R    ++I F  LI    K         +Y+ M+     PN  T  +LI+  C  
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L     M D +  K C P V+   +LI    + +R+E+GM L   M  + ++ D   Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +++   +   L  A  V+  M+  G S +   Y   +   C  GKIE+A  ++++++ 
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + +     T+N++I+G  +  +++E+      +  + + P   A+  MI  LC  G  ++
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482

Query: 252 ANGMLTLALDKGFSPNEITYS 272
           A+ +     + GF P+E  Y 
Sbjct: 483 ADKLCRRMKEDGFMPSERIYD 503



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 121/266 (45%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           + ++   L   ML+   I   + ++ ++    KM   +  + +Y +M   G S + + +T
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I  +C   ++  A  L+ +M   G +P   T   L+ G  +  R +E++S  + M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             +P+   +N +I  LC+  +   A  +      KG   + +TY+ LI G +  G   + 
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            +L  +M  + I P +  +T+LI +  + G L EA   +K M   S+VP V  Y SL+  
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
               G    A ++ + MVS+G  P  
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDV 324



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 126/282 (44%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P ++  T ++  I +  + +  + L  +M    + HD  +++++++   +   L  A
Sbjct: 74  RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLA 133

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L +  +M+K GF  +     + +  +C+  + +EA  L+  M+  G  P    +N +I G
Sbjct: 134 LALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 193

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K + +  +L     M  + +      +N +I  L   G    A  +L   + +   PN
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            I ++ LI  + KEG + E   LY EM  +S+ P +  Y SLI+  C  G L +A   F 
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +M S    P V  Y +L+    +       + L  EM  +GL
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 79/199 (39%)

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           K ++A  L  EM  +   P    F  ++   AK  + +  +    +M +  +     +F 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I   C C     A  +L   +  GF P+ +T   L+ G+ +    QE + L   M+  
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
              P +  Y ++I+ LC+   L  A + F  M+   +      Y +L+      G    A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 358 LHLCEEMVSEGLKPSTSYL 376
             L  +MV   + P+  + 
Sbjct: 239 ARLLRDMVKRKIDPNVIFF 257


>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 45/362 (12%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-----YPNEATIRTLISALCKGG 72
           G   S+ SFNTL++ + ++ R DLV      M +N R      PN  T   L+ ALCK  
Sbjct: 200 GLQPSVRSFNTLLNTLVQNKRFDLV----HLMFKNCRKKFGIVPNVFTCNILVKALCK-- 253

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
                                            +  I+  + +L+ M     I + + Y+
Sbjct: 254 ---------------------------------KNDIDAAIRVLEEMPAMGFIPNVVTYT 280

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I+   V   ++  A  V+ E+L RG+  +   YT  +  YC+ G+  +A  +M EME  
Sbjct: 281 TILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEEN 340

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            ++P D T+ ++IE   K K+  E L+  + M+ +K +PS +    +I  LCE G  + A
Sbjct: 341 RVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVA 400

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +    L K  +P+    S LI    KEG++ E  KL+ E E  SI  TL  Y +LI+ 
Sbjct: 401 CELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTL-TYNALIAG 459

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +C+ G+L EA + +  M     VP    Y  L+    + GN  + + + EEM+  G  P+
Sbjct: 460 MCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519

Query: 373 TS 374
            +
Sbjct: 520 KA 521



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 129/269 (47%), Gaps = 3/269 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           + A  V   +   GF  +++++ T++   V+K D      R++  +L+    P+  T   
Sbjct: 258 DAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVG-ARRVFGEILDRGWVPDPTTYTI 316

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G+    V ++D +   R  P  +    +I    +E++  E + LL  ML K 
Sbjct: 317 LMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKK 376

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            I  +     ++    +   +E A  +++++LK+  + ++ + +T I   C+ GK+ EA 
Sbjct: 377 YIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEAR 436

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  E E   + P   T+N LI G  +   + E+    + M+ +  +P+   +N +I+  
Sbjct: 437 KLFDEFEKGSI-PSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGF 495

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYS 272
           C+ GNA++   ++   LD G  PN+ TY+
Sbjct: 496 CKVGNAREGIRVMEEMLDNGCLPNKATYA 524



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 133/312 (42%), Gaps = 37/312 (11%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+I      G+ +  +    RI      P V    +L+  ++Q +R +   ++ K   +K
Sbjct: 175 TVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKK 234

Query: 123 -NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ +    +++V A  K  ++++A+ V EEM   GF  N   YTT +G Y   G +  
Sbjct: 235 FGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVG 294

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  E+ + G  P   T+ +L++G  K  R  +++   ++M   ++            
Sbjct: 295 ARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRV------------ 342

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                                   PN++TY  +I  Y KE +  EVL L  +M  K   P
Sbjct: 343 -----------------------EPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIP 379

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           +      +I  LC+ GK+E A + +K +   +  P   I  +L+    ++G   +A  L 
Sbjct: 380 SSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF 439

Query: 362 EEMVSEGLKPST 373
           +E   +G  PST
Sbjct: 440 DEF-EKGSIPST 450



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 115/261 (44%), Gaps = 5/261 (1%)

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             +N  H+   Y  ++    K R  E    +  ++ K        ++ T I  Y   G+ 
Sbjct: 127 FHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRP 186

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR---IEESLSYCEQMMSRKLLPSCSAF 236
           + A      + + GL+P   +FN L+    + KR   +      C +     ++P+    
Sbjct: 187 KLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFG--IVPNVFTC 244

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +++ LC+  +   A  +L      GF PN +TY+ ++GGY  +G++    +++ E+  
Sbjct: 245 NILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILD 304

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           +   P    YT L+   C+ G+  +A K    M+ + + P    Y  ++  + ++    +
Sbjct: 305 RGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGE 364

Query: 357 ALHLCEEMVSEGLKPSTSYLC 377
            L+L ++M+ +   PS++  C
Sbjct: 365 VLNLLDDMLEKKYIPSSALCC 385


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 152/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 125 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 178

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 179 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 208

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 209 QPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAME 268

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             ++M+S+ LLP    +N +I  LC+ G+ KQAN ++   + KG  P++ITY+ LI G  
Sbjct: 269 IYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCC 328

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 388

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM   G  PS
Sbjct: 389 TYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPS 421



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 146/312 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P     + LI  + +E ++++   L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y+ ML +    +   Y T I   C+ G ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +AN L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 300 QANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  +L  EM+     
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHV 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN +   
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K+G +   +++Y  M  +S+ P L  Y +LI  LC+ G 
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A+     M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 298 LKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + +   AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 24  TMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKLWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P    Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H +KG 
Sbjct: 203 MLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + + M+S+ L P 
Sbjct: 263 VDLAMEIYKRMLSQSLLPD 281


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 164/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG ++++  +NT+I    K           + M+E    P+  T  TLIS  C+ G+
Sbjct: 300 MNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGK 359

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L++  GK   P     T LI    ++   +     L  M  +    D + Y  
Sbjct: 360 VSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGA 419

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V+  V    ++ AL + E+ML+RG   ++ +Y   +   C+  K+  A  L+ EM +  
Sbjct: 420 LVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS 479

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P    +  L++G  +   ++E+    E  + + + P    +N MI+  C+ G  K A 
Sbjct: 480 VLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAM 539

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +     +  +P+E TYS +I GY K+ ++    K++ EM      P +  YTSLI+  
Sbjct: 540 ACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGF 599

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G L  + K F+ M++  LVP V  Y  L+G   ++     A    EEM+     P+
Sbjct: 600 CRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPN 658



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 166/355 (46%), Gaps = 4/355 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLE----NIRYPNEATIRTLISALCKGGQLQTY 77
            +I+ N+L++++ K  R ++  ++Y  MLE      R  +  +   ++  LCK G+L+  
Sbjct: 164 DVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEG 223

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +++   G+ C P +I   +LI    ++  +E    L   +  K  +     Y  I+  
Sbjct: 224 RKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIING 283

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  + ++   +  EM  RG + N  VY T I A  ++G I +A   ++ M   G KP 
Sbjct: 284 FCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPD 343

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI G  +  ++ E+    EQ + + L+P+  ++  +I   C+ G   +A+  L 
Sbjct: 344 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLI 403

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              ++G  P+ +TY  L+ G    GE+   L +  +M  + + P    Y  L+S LC+  
Sbjct: 404 EMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKF 463

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           KL  A      M   S++P   +Y +LV   +  GN  +A  L E  + +G+ P 
Sbjct: 464 KLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 518



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 171/379 (45%), Gaps = 14/379 (3%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    ++++NTLI    +  +     ++ +  L     PN+ +   LI A CK G     
Sbjct: 339 GCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRA 398

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            + L  +  +   P ++   +L+  ++    ++  + + ++ML + +  D   Y++++  
Sbjct: 399 SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSG 458

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   L +A ++  EML +    ++FVY T +  +   G ++EA  L +     G+ P 
Sbjct: 459 LCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 518

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N +I+G  K   ++++++   +M  R L P    ++ +I    +  +   A  M  
Sbjct: 519 IVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFR 578

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +     PN +TY+ LI G+ ++G++   LK++ EM+   + P +  Y+ LI S C+  
Sbjct: 579 EMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEA 638

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA--------------LHLCEE 363
           KL +A  +F+ M  +  VP    +  LV    + G +A +              L+    
Sbjct: 639 KLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGR 698

Query: 364 MVSEGLKPSTSYLCSASTC 382
           M+S+G  P ++   S   C
Sbjct: 699 MISDGWAPRSAAYNSILIC 717



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 159/352 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I +NTLI    K    ++   ++  +      P   T   +I+  CK G  +    +L
Sbjct: 238 NIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLL 297

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             ++ +  +  V V  ++I    +   I + +  ++ M+      D + Y+ ++    + 
Sbjct: 298 MEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRD 357

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A  + E+ L +G   N F YT  I AYC+ G  + A+  + EM   G KP   T+
Sbjct: 358 GKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTY 417

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             L+ G   A  ++ +L+  E+M+ R + P    +N ++  LC+      A  +L   LD
Sbjct: 418 GALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLD 477

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +   P+   Y+ L+ G+ + G + E  KL+     K ++P +  Y ++I   C+ G +++
Sbjct: 478 QSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKD 537

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A      MK   L P    Y +++  ++++ +   A  +  EMV    KP+ 
Sbjct: 538 AMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 165/360 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+ +GF  ++ ++  +I+   K      + R+   M       N     T+I A  K G 
Sbjct: 265 LKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 324

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   V+ ++ +    C P ++   +LI    ++ ++ E   LL++ L K ++ +  +Y+ 
Sbjct: 325 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 384

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++A  K    + A     EM +RG   +   Y   +      G+++ A  + ++M   G
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P    +N+L+ G  K  ++  +     +M+ + +LP    +  ++      GN  +A 
Sbjct: 445 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 504

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +  L ++KG +P  + Y+ +I GY K G +++ +     M+ + ++P    Y+++I   
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 564

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +   L+ A K F+ M      P V  Y SL+     KG+  ++L +  EM + GL P+ 
Sbjct: 565 VKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNV 624



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 151/356 (42%), Gaps = 15/356 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    L+++  L+H +  +   D+   I + MLE   +P+      L+S LCK  +
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFK 464

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     +L  +  +   P   V  +L+   I+   ++E   L +  + K M    + Y+ 
Sbjct: 465 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 524

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   ++ A+     M KR  + + F Y+T I  Y +   ++ A  + +EM    
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            KP   T+  LI G  +   +  SL    +M +  L+P+   ++ +I   C+      A 
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAA 644

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEG---------EIQE-----VLKLYYEMEYKSI 299
                 L     PN++T+++L+ G++K G         E QE      L  +  M     
Sbjct: 645 SFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGW 704

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP-GVDIYESLVGIHLEKGNK 354
           +P   AY S++  LCQ G    A +    M S   +P  V     L G+ LE  +K
Sbjct: 705 APRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSK 760



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 142/302 (47%), Gaps = 8/302 (2%)

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-VLLKRMLRKNMIHDTIAYSLIV 135
           + D + R  G+   P+     S +L+++   R+   M V+L+ M  + M     A S+++
Sbjct: 79  FFDWVSR--GQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVI 136

Query: 136 YAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEM---EN 191
            A      +E AL +Y  +LK   +  +     + +    + G+IE A  L  EM   + 
Sbjct: 137 QAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDG 196

Query: 192 AGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           AG +  D  +  ++++G  K  ++EE     E    +  +P+   +N +I   C+ G+ +
Sbjct: 197 AGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDME 256

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            ANG+      KGF P   TY  +I G+ K+G+ + + +L  EM  + ++  +  Y ++I
Sbjct: 257 MANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 316

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            +  + G + +A +  + M      P +  Y +L+      G  ++A  L E+ + +GL 
Sbjct: 317 DARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLM 376

Query: 371 PS 372
           P+
Sbjct: 377 PN 378


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 169/372 (45%), Gaps = 5/372 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + AF++   +++ G   +  +++TLI+ +  S R +        M  +   P   T 
Sbjct: 277 RDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTF 336

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV-LLKRML 120
              I ALC  G+++    +   +  K C P V   TSL    I  +R+    + L  RM 
Sbjct: 337 TAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL----ISGQRVSRMAIGLFHRMS 392

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R  ++ +T+ Y+ ++   ++   ++SAL+V+  M K G   N+  Y   I  YC  G  E
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  ++  M      P   T+N++I+G   +   + ++   E M +    P   ++ E+I
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+    + A+GM    +D+G  PNE+TY+ LI GY K+ ++    ++   M+     
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y  LI  L +      A++  K+M    + P V  Y +++      G    AL +
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 361 CEEMVSEGLKPS 372
             +MV  G  P+
Sbjct: 633 FNKMVKHGCLPN 644



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 173/372 (46%), Gaps = 3/372 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   E A+ +   ++++G   ++ ++ +LI   +    + +   ++  M  +   PN  T
Sbjct: 346 MGRIEDAWKIFIDMKKKGCKPNVYTYTSLI---SGQRVSRMAIGLFHRMSRDGVVPNTVT 402

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L++ L +  ++ + + + + +    C P       LI         E+ M +L  ML
Sbjct: 403 YNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML 462

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +       + Y++I+       + + A+ V E M   G   + + YT  I  +C+  K+E
Sbjct: 463 KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKME 522

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A+ +  EM + GL P + T+  LI G  K ++++ +    E+M      P+   +N +I
Sbjct: 523 LASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLI 582

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L +  N   A  +  + L++  SP+ +TYS +I G    G I   L+++ +M      
Sbjct: 583 HGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCL 642

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P L  Y+SLI +L Q G++EEA++ F  +K   L+P    Y  ++ + +  G   +A   
Sbjct: 643 PNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDF 702

Query: 361 CEEMVSEGLKPS 372
             EM++ G +P+
Sbjct: 703 LGEMINAGCQPT 714



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 162/398 (40%), Gaps = 32/398 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +      QRG  + L ++ TL+  + K +    V   Y  +L     PN     ++I+
Sbjct: 177 ALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVIN 236

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G ++    +++++      P     TS+IL   +   ++    +  RM  +    
Sbjct: 237 ALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEP 296

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   YS ++        +  AL    EM + G       +T  I A C+ G+IE+A  + 
Sbjct: 297 NAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAK--------------------------------RI 214
            +M+  G KP   T+  LI G   ++                                 I
Sbjct: 357 IDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEI 416

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           + +L     M     LP+ S++NE+IR  C  G+ ++A  MLT  L    +P  +TY+ +
Sbjct: 417 DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNII 476

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I GY   G+    +++   M+     P   +YT LIS  C+  K+E A   F  M    L
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGL 536

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            P    Y +L+  + +      A  + E M   G +P+
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPN 574



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 159/357 (44%), Gaps = 3/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G      ++ ++I    ++   D  + I+  M E    PN AT  TLI+ LC  G++ 
Sbjct: 256 KSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVN 315

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +D +  +      P V   T+ I+ +    RIE+   +   M +K    +   Y+ ++
Sbjct: 316 EALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI 375

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
             +   R    A+ ++  M + G   N+  Y   +    E  +I+ A  +   M   G  
Sbjct: 376 SGQ---RVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCL 432

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N LI G       E+++S    M+  +  P+   +N +I+  C+ G+   A  +
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L L    G  P+E +Y+ LI G+ K  +++    ++ EM  + + P    YT+LIS  C+
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             KL+ A +  + MK     P V  Y  L+    ++ N + A  LC+ M+ E + P 
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPD 609



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 157/344 (45%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+  +A  +   + + G   + +++N L++V+ ++   D    ++  M ++   PN ++ 
Sbjct: 379 RVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSY 438

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C  G  +  + ML  +   R +P ++    +I         +  + +L+ M  
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                D  +Y+ ++    K+  +E A  ++ EM+ RG   N   YT  I  YC+  K++ 
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDC 558

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +++ M+ +G +P  +T+N+LI G  K      +   C+ M+  K+ P    ++ +I 
Sbjct: 559 AARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVIN 618

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC  G    A  M    +  G  PN  TYS LI    +EG ++E  +++ E++ + + P
Sbjct: 619 GLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
               Y  +I      GK++ A  +   M +    P +  Y+ L+
Sbjct: 679 DEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLI 722



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 147/336 (43%), Gaps = 18/336 (5%)

Query: 37  DRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN 96
           DR   V R   HM+++     E T            Q   Y+DM  +  G +    +   
Sbjct: 152 DRPAAVGRARIHMIKSCSNKAEMT------------QALNYLDMFSQ-RGPKMG--LFTY 196

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           T+L++++ +       M    ++LR+ +  + + Y+ ++ A  K  N+  A  +  ++ K
Sbjct: 197 TTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFK 256

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G   ++F YT+ I  YC    ++ A  +   M+  G +P   T++ LI G   + R+ E
Sbjct: 257 SGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNE 316

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +L +  +M    +LP+   F   I  LC+ G  + A  +      KG  PN  TY+ LI 
Sbjct: 317 ALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS 376

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G   +   +  + L++ M    + P    Y +L++ L +  +++ A   F +M  H  +P
Sbjct: 377 G---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLP 433

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               Y  L+  +   G+  KA+ +   M+     P+
Sbjct: 434 NTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPT 469



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 153/341 (44%), Gaps = 13/341 (3%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA  V   ++  G      S+  LI    K  + +L   ++  M++    PNE T   L
Sbjct: 487 DVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTAL 546

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS  CK  +L     ML+R+    C P V     LI  + ++        L K ML + +
Sbjct: 547 ISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKI 606

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + YS ++        +  AL ++ +M+K G   N   Y++ I A  + G++EEA  
Sbjct: 607 SPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEE 666

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  E++  GL P + T+  +IE C  + +++ +  +  +M++    P+   ++ +I+ L 
Sbjct: 667 MFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL- 725

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              N    + ++ L       PN  + S        +  I  +     E++++ +S  L 
Sbjct: 726 --QNEMVYHKLVAL-------PNAASTSTFDDQIINKDVISVLSSKLAELDFE-LSRQL- 774

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            Y +L+S L + G+  EA+  ++ M S S  P  D Y+  +
Sbjct: 775 -YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFL 814



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 3/246 (1%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
             Y+ ++    K+    + +  Y ++L+ G   N  +Y + I A C+ G + +A  ++ +
Sbjct: 194 FTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINK 253

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           +  +G+KP   T+  +I G  + + ++ +     +M      P+ + ++ +I  LC  G 
Sbjct: 254 VFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGR 313

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A   ++     G  P   T++  I      G I++  K++ +M+ K   P +  YTS
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LIS   +  ++  A   F  M    +VP    Y +L+ + +E      AL +   M   G
Sbjct: 374 LISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430

Query: 369 LKPSTS 374
             P+TS
Sbjct: 431 CLPNTS 436



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/353 (19%), Positives = 140/353 (39%), Gaps = 57/353 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   ++ ++N LIH +TK +       + + MLE    P+  T  T+I+ LC  G 
Sbjct: 566 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGA 625

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-- 131
           +   ++M +++    C P +   +SLI  + QE R+EE   +   + ++ +I D + Y  
Sbjct: 626 IPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVK 685

Query: 132 -----------------------------------------SLIVYAK-VKMRNLESALV 149
                                                    + +VY K V + N  S   
Sbjct: 686 MIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTST 745

Query: 150 VYEEMLKRG-------------FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
             ++++ +              F  +  +Y   +      G+  EAN L + M +    P
Sbjct: 746 FDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCP 805

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
             +T+   +    +A +++ ++   + M  ++     + + E+I  LC+    K+A  + 
Sbjct: 806 NQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVF 865

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
              L +  + +EI ++ LI G    G     ++  + ME    +P+  A T L
Sbjct: 866 EKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTIL 918



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 57/136 (41%)

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           MI+         QA   L +   +G      TY+ L+    K      V+  Y+++  + 
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           + P L  Y S+I++LC+ G + +A+     +    + P    Y S++  +    +   A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 359 HLCEEMVSEGLKPSTS 374
            +   M  EG +P+ +
Sbjct: 284 EIFNRMDEEGCEPNAA 299


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 169/361 (46%), Gaps = 8/361 (2%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF L  +S+ TLI+ + K  R     ++ + +   +  PN      +I  +CK   +  
Sbjct: 160 QGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVND 219

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+  ++  KR  P V    +LI       ++   + L  +M ++N+  +   ++++V 
Sbjct: 220 AFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVD 279

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +  A VV   M+K     +   Y + +  YC   K+ +A  +   M + G+  
Sbjct: 280 GFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIA 339

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
             + +  ++ G  K K ++E+++  E+M  RK++P+   ++ +I  LC+ G    A  ++
Sbjct: 340 NVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               D+G  PN +TYS ++    K   + + + L   ++ + I P +  YT LI  LCQ 
Sbjct: 400 DEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQS 459

Query: 317 GKLEEADKYFKIMKSHSLVPG--VDIYESLVGIH--LEKGNKAKALHLCEEMVSEGLKPS 372
           G+LE+A   F+ +    LV G  +D+Y   V I    +KG   KAL L  +M   G  P+
Sbjct: 460 GRLEDAQNVFEDL----LVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515

Query: 373 T 373
            
Sbjct: 516 A 516



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 161/366 (43%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + +E  G      +FN LI+  ++   N L + I+  +L+   +P   T  TLI 
Sbjct: 80  ALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIK 139

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G +   +   D++  +      +   +LI  + +  RI   + LLKR+  K +  
Sbjct: 140 GLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 199

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++I+    K + +  A  +Y +M+ +    + F Y   I  +    K+  A  L 
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLF 259

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+   + P   TFN+L++G  K  ++ ++      MM   + P    +N ++   C  
Sbjct: 260 NKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSI 319

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +       G   N   Y+ ++ G+ K   + E + L+ EM  + I P +  Y
Sbjct: 320 NKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTY 379

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +SLI  LC+ G++  A K    M      P +  Y S++    +  +  KA+ L   +  
Sbjct: 380 SSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKD 439

Query: 367 EGLKPS 372
           +G++P 
Sbjct: 440 QGIRPD 445



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 163/346 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           + +N +I  + K+   +  + +Y  M+     P+  T   LIS      +L   +D+ ++
Sbjct: 202 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNK 261

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +  +P V     L+    +E ++ +  V+L  M++ ++  D + Y+ ++     +  
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A  +++ M   G  AN  +YTT +  +C+   ++EA  L +EM    + P   T++ 
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  K  RI  +L   ++M  R   P+   ++ ++  LC+  +  +A  +LT   D+G
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+  TY+ LI G  + G +++   ++ ++  K  +  + AYT +I   C  G  ++A 
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
                M+ +  +P    YE ++    EK     A  L  EM+  GL
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 114/255 (44%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           +L KN    T  ++ I+ + VK ++  +AL ++++M   G  ++ F +   I  + + G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
              +  +  ++   G  P   TFN LI+G      I ++L + ++++++       ++  
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  LC+ G    A  +L     K   PN + Y+ +I    K   + +   LY +M  K 
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I P +  Y +LIS      KL  A   F  MK  ++ P V  +  LV    ++G    A 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 359 HLCEEMVSEGLKPST 373
            +   M+ + +KP  
Sbjct: 292 VVLAIMMKDDIKPDV 306



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/287 (20%), Positives = 135/287 (47%), Gaps = 8/287 (2%)

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV--YAKVKMRNL 144
           K  +P       ++  +++ +     + L ++M    +  D   +++++  ++++ + +L
Sbjct: 55  KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             +  ++ ++LK+G+   +  + T I   C  G I +A     ++   G      ++  L
Sbjct: 115 --SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTL 172

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  K  RI  +L   +++  + + P+   +N +I  +C+      A  + +  + K  
Sbjct: 173 INGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRI 232

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  TY+ LI G++   ++   + L+ +M+ ++I+P +  +  L+   C+ GK+ +A  
Sbjct: 233 CPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKV 292

Query: 325 YFKIMKSHSLVPGVDIYESLVGIH--LEKGNKAKALHLCEEMVSEGL 369
              IM    + P V  Y SL+  +  + K NKAK +   + M S G+
Sbjct: 293 VLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIF--DSMASGGV 337



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 92/175 (52%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T  +LI  LCK G++   + ++D +H +   P ++  +S++  + +   +++ + L
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  +  + +  D   Y++++    +   LE A  V+E++L +G++ + + YT  I  +C+
Sbjct: 434 LTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCD 493

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
            G  ++A  L+ +ME+ G  P  +T+ L+I    +    + +     +M+ R LL
Sbjct: 494 KGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/224 (17%), Positives = 101/224 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++N+L+      ++ +    I+  M       N     T+++  CK   +   +++ 
Sbjct: 305 DVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLF 364

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  ++  P V+  +SLI  + +  RI   + L+  M  +    + + YS I+ A  K 
Sbjct: 365 EEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKN 424

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +++ A+ +   +  +G   + + YT  I   C+ G++E+A  + +++   G       +
Sbjct: 425 HHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAY 484

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            ++I+G       +++L+   +M     +P+   +  +I  L E
Sbjct: 485 TVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFE 528


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 175/363 (48%), Gaps = 4/363 (1%)

Query: 4   FEVAFDV-CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TI 61
           F+ AF + C  L+ R    S++ F  ++ V+ K ++ D+V  +Y H +EN+   ++  + 
Sbjct: 585 FDDAFSLFCEMLQSRPIP-SIVDFTRVLTVIAKMNKFDIVIYLY-HKMENLGISHDLYSF 642

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C+  +L   + +L ++      P ++   SL+    Q  R +E + L+  M  
Sbjct: 643 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 702

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              + + + Y+ ++    K R+L +AL V+  M K+G  A++  Y T I      G+  +
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+++M    + P    F  LI+   K   + E+ +  ++M+ R ++P+   +N +I 
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  G    A  M  L + KG  P+ +TY+ LI G+ K   +++ +KL+ EM Y+ +  
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y +LI   CQ GKL  A K F  M    + P +  Y  L+      G   KAL + 
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 942

Query: 362 EEM 364
           E++
Sbjct: 943 EDL 945



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 180/404 (44%), Gaps = 39/404 (9%)

Query: 8    FDVCRYL----EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            FD+  YL    E  G S  L SF  LIH   +  R  L   +   M++    P+  T+ +
Sbjct: 620  FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 679

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSP-MVIVNT------------------------- 97
            L++  C+G + Q  V ++D + G    P +VI NT                         
Sbjct: 680  LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739

Query: 98   ---------SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
                     +LI  +    R  +   LL+ M+++ +  + I ++ ++   VK  NL  A 
Sbjct: 740  IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799

Query: 149  VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
             +Y+EM++R    N F Y + I  +C +G + +A  +   M + G  P   T+N LI G 
Sbjct: 800  NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859

Query: 209  AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
             K+KR+E+ +    +M  + L+     +N +I   C+ G    A  +    +D G SP+ 
Sbjct: 860  CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 919

Query: 269  ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
            +TY+ L+      G+I++ L +  +++   +   +  Y  +I  LC+  KL+EA   F+ 
Sbjct: 920  VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 979

Query: 329  MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +    + P    Y +++     KG + +A  LC  M  +G  PS
Sbjct: 980  LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 168/363 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + + G+  S+++F +L+H     +R    + +   M+++   PN     TLI 
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L   +++L+ +  K     V+   +L+  +    R  +   +L+ M+++++  
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++   VK  NL+ A  +Y+EM++     N+  Y + I   C +G++ +A    
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M + G  P   T+N LI G  K + ++E +   ++M           +N +I   C+ 
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A  +    + +  +P+ IT+  L+ G    GEI+  L  + +M        + AY
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I  LC+  K+E+A + F  +    + P    Y  ++    + G + +A  L   M  
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484

Query: 367 EGL 369
           EG+
Sbjct: 485 EGI 487



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 130/280 (46%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P ++  T L+       R E  +   ++M    + HD  +++++++   +   L  AL V
Sbjct: 69  PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             +M+K G+  +   + + +  +C   +I +A  L+  M  +G +P    +N LI+G  K
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              +  +L    +M  + L      +N ++  LC  G    A  ML   + +  +P+ +T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           ++ LI  + K+G + E  +LY EM   S+ P    Y S+I+ LC  G+L +A K F +M 
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S    P V  Y +L+    +     + + L + M  EG  
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 2/318 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           S++ F  L+       R + V    Q M L  I + +  +   LI   C+  +L   + +
Sbjct: 70  SIVDFTRLLTATANLRRYETVIYFSQKMELYGISH-DLYSFTILIHCFCRCSRLSFALSV 128

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++   SL+       RI +   L+  M++     + + Y+ ++    K
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              L  AL +  EM K+G  A+   Y T +   C  G+  +A  ++++M    + P   T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           F  LI+   K   ++E+    ++M+   + P+   +N +I  LC  G    A     L  
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG  PN +TY+ LI G+ K   + E +KL+  M  +  +  +  Y +LI   CQ GKL 
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368

Query: 321 EADKYFKIMKSHSLVPGV 338
            A   F  M S  + P +
Sbjct: 369 VALDIFCWMVSRRVTPDI 386



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 132/300 (44%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A +V   +E++G     +++NTLI  ++ S R     R+ + M++    PN      LI 
Sbjct: 728  ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 787

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
               K G L    ++   +  +   P V    SLI        + +   +   M+ K    
Sbjct: 788  TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 847

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            D + Y+ ++    K + +E  + ++ EM  +G   ++F Y T I  YC+ GK+  A  + 
Sbjct: 848  DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 907

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
              M + G+ P   T+N+L++      +IE++L   E +   ++      +N +I+ LC  
Sbjct: 908  NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 967

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               K+A  +      KG  P+ I Y  +I G  ++G  +E  KL   M+     P+   Y
Sbjct: 968  DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1027



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 120/261 (45%)

Query: 12   RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
            R + +R    ++I F  LI    K         +Y+ M+     PN  T  +LI+  C  
Sbjct: 768  RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 827

Query: 72   GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            G L     M D +  K C P V+   +LI    + +R+E+GM L   M  + ++ D   Y
Sbjct: 828  GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 887

Query: 132  SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
            + +++   +   L  A  V+  M+  G S +   Y   +   C  GKIE+A  ++++++ 
Sbjct: 888  NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 947

Query: 192  AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            + +     T+N++I+G  +  +++E+      +  + + P   A+  MI  LC  G  ++
Sbjct: 948  SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 1007

Query: 252  ANGMLTLALDKGFSPNEITYS 272
            A+ +     + GF P+E  Y 
Sbjct: 1008 ADKLCRRMKEDGFMPSERIYD 1028



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 121/266 (45%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           + ++   L   ML+   I   + ++ ++    KM   +  + +Y +M   G S + + +T
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I  +C   ++  A  L+ +M   G +P   T   L+ G  +  R +E++S  + M   
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             +P+   +N +I  LC+  +   A  +      KG   + +TY+ LI G +  G   + 
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            +L  +M  + I P +  +T+LI +  + G L EA   +K M   S+VP V  Y SL+  
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
               G    A ++ + MVS+G  P  
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDV 849



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 126/282 (44%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P ++  T ++  I +  + +  + L  +M    + HD  +++++++   +   L  A
Sbjct: 599 RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLA 658

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L +  +M+K GF  +     + +  +C+  + +EA  L+  M+  G  P    +N +I G
Sbjct: 659 LALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 718

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K + +  +L     M  + +      +N +I  L   G    A  +L   + +   PN
Sbjct: 719 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 778

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            I ++ LI  + KEG + E   LY EM  +S+ P +  Y SLI+  C  G L +A   F 
Sbjct: 779 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 838

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +M S    P V  Y +L+    +       + L  EM  +GL
Sbjct: 839 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 880



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 115/270 (42%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           R+   + +L +M++       + +  +++    +  +  A  +   M+K G+  N  VY 
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           T I   C+ G++  A  L+ EME  GL     T+N L+ G   + R  ++      MM R
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            + P    F  +I    + GN  +A  +    +     PN +TY+ +I G    G + + 
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            K +  M  K   P +  Y +LIS  C+   ++E  K F+ M        +  Y +L+  
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           + + G    AL +   MVS  + P     C
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHC 390



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 128/295 (43%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            +A ++   +E++G    ++++NTL+  +  S R     R+ + M++    P+  T   L
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I    K G L    ++   +      P  +   S+I  +    R+ +       M  K  
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ ++    K R ++  + +++ M   GF+A+ F Y T I  YC+ GK+  A  
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +   M +  + P   T  +L+ G      IE +L   + M   +      A+N MI  LC
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           +    ++A  +      +G  P+  TY+ +I G  K G  +E  +L   M+ + I
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 85/399 (21%), Positives = 161/399 (40%), Gaps = 47/399 (11%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTL 64
           V FD  R  E+    + ++++N +IH + K+D+ +  W ++  + +E ++ P+  T   +
Sbjct: 407 VKFDDMRESEK---YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK-PDARTYTIM 462

Query: 65  ISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVN-----------TSLILRIIQEERIEE 111
           I  LCK G  +   +++ R+   G  C      +            SL LR I E R + 
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWE-RSKS 521

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
               ++R++        IA+S  V   V+   L         +L+RG +  + +  +F G
Sbjct: 522 NPFWMQRLI-------PIAFSSSVKGFVRRHYL---------LLERGNNPETSLSRSFSG 565

Query: 172 AYCEYG------------KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           A   +             K ++A  L  EM  +   P    F  ++   AK  + +  + 
Sbjct: 566 ASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIY 625

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
              +M +  +     +F  +I   C C     A  +L   +  GF P+ +T   L+ G+ 
Sbjct: 626 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 685

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           +    QE + L   M+     P +  Y ++I+ LC+   L  A + F  M+   +     
Sbjct: 686 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 745

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            Y +L+      G    A  L  +MV   + P+  +  +
Sbjct: 746 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 175/407 (42%), Gaps = 39/407 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A ++  +++ +G    + ++N LIH + +S+R    + + + M + + +PNE T  T
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+     G++     +L+ +     SP  +   +LI   I E   +E + +   M  K 
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +    ++Y +++    K    + A   Y  M + G       YT  I   C+ G ++EA 
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKR------------------------------ 213
            L+ EM   G+ P   T++ LI G  K  R                              
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 214 -----IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
                ++E++   E M+          FN ++  LC+ G   +A   +      G  PN 
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           +++  LI GY   GE  +   ++ EM      PT   Y SL+  LC+ G L EA+K+ K 
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603

Query: 329 MKSHSLVPGVD--IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +  H++   VD  +Y +L+    + GN AKA+ L  EMV   + P +
Sbjct: 604 L--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 167/366 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + + ++ R +   GF+ S+ + N ++  V KS  +  VW   + ML+    P+ AT  
Sbjct: 138 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 197

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+ LC  G  +    ++ ++     +P ++   +++    ++ R +  + LL  M  K
Sbjct: 198 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 257

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y+++++   +   +    ++  +M KR    N   Y T I  +   GK+  A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L+ EM + GL P   TFN LI+G       +E+L     M ++ L PS  ++  ++  
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+      A G        G     ITY+ +I G  K G + E + L  EM    I P 
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y++LI+  C+ G+ + A +    +    L P   IY +L+      G   +A+ + E
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497

Query: 363 EMVSEG 368
            M+ EG
Sbjct: 498 AMILEG 503



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 148/316 (46%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N +    LI    + G +Q  +++   +     +P V    +++  +++          L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           K ML++ +  D   +++++       + E +  + ++M K G++     Y T +  YC+ 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+ + A  L+  M++ G+     T+N+LI    ++ RI +       M  R + P+   +
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I      G    A+ +L   L  G SPN +T++ LI G+  EG  +E LK++Y ME 
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K ++P+  +Y  L+  LC+  + + A  ++  MK + +  G   Y  ++    + G   +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 357 ALHLCEEMVSEGLKPS 372
           A+ L  EM  +G+ P 
Sbjct: 422 AVVLLNEMSKDGIDPD 437



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 162/370 (43%), Gaps = 36/370 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F++A      +++ G  +  I++  +I  + K+   D    +   M ++   P+  T   
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK G+ +T  +++ RI+    SP                                
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSP-------------------------------- 471

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + I YS ++Y   +M  L+ A+ +YE M+  G + + F +   + + C+ GK+ EA 
Sbjct: 472 ---NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             M+ M + G+ P   +F+ LI G   +    ++ S  ++M      P+   +  +++ L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ ++A   L        + + + Y+ L+    K G + + + L+ EM  +SI P  
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             YTSLIS LC+ GK   A  + K  ++  +++P   +Y   V    + G     ++  E
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708

Query: 363 EMVSEGLKPS 372
           +M + G  P 
Sbjct: 709 QMDNLGHTPD 718



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/465 (20%), Positives = 174/465 (37%), Gaps = 106/465 (22%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +   G   + +SF+ LI+    S      + ++  M +   +P   T  +L+  LCKG
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L+     L  +H    +   ++  +L+  + +   + + + L   M++++++ D+  Y
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 132 S--------------LIVYAK----------------------VKMRNLESALVVYEEML 155
           +               I++AK                       K    ++ +   E+M 
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
             G + +       I  Y   GKIE+ N L+ EM N    P   T+N+L+ G +K K + 
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771

Query: 216 ESLSYCEQMMSRKLLP---SCSA--------------------------------FNEMI 240
            S      ++   +LP   +C +                                FN +I
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831

Query: 241 RRLCECGNAKQANGM------LTLALDK-----------------------------GFS 265
            + C  G    A  +      L ++LDK                             G S
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P    Y  LI G  + G+I+    +  EM    I P   A ++++ +L +CGK +EA   
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            + M    LVP +  + +L+ +  + GN  +AL L   M + GLK
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 101/213 (47%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           ++N  VY   I  Y   G I+++  + + M   G  P   T N ++    K+       S
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + ++M+ RK+ P  + FN +I  LC  G+ ++++ ++      G++P  +TY+ ++  Y 
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+G  +  ++L   M+ K +   +  Y  LI  LC+  ++ +     + M+   + P   
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +L+     +G    A  L  EM+S GL P+
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/332 (20%), Positives = 138/332 (41%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
            ++  G +  +++ N +I   ++  + +    +   M      PN  T   L+    K   
Sbjct: 710  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769

Query: 74   LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            + T   +   I      P  +   SL+L I +   +E G+ +LK  + + +  D   +++
Sbjct: 770  VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829

Query: 134  IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            ++        +  A  + + M   G S +       +       + +E+  ++ EM   G
Sbjct: 830  LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889

Query: 194  LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            + P    +  LI G  +   I+ +    E+M++ K+ P   A + M+R L +CG A +A 
Sbjct: 890  ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949

Query: 254  GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +L   L     P   +++ L+    K G + E L+L   M    +   L +Y  LI+ L
Sbjct: 950  LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009

Query: 314  CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            C  G +  A + ++ MK    +     Y++L+
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALI 1041



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/338 (20%), Positives = 146/338 (43%), Gaps = 5/338 (1%)

Query: 43   WRI---YQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
            W+    ++  ++N+ + P+  T   +I    + G+++   D+L  +  +   P +     
Sbjct: 700  WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759

Query: 99   LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
            L+    + + +    +L + ++   ++ D +    +V    +   LE  L + +  + RG
Sbjct: 760  LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819

Query: 159  FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
               + + +   I   C  G+I  A  L++ M + G+    +T + ++    +  R +ES 
Sbjct: 820  VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879

Query: 219  SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                +M  + + P    +  +I  LC  G+ K A  +    +     P  +  S ++   
Sbjct: 880  MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939

Query: 279  AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            AK G+  E   L   M    + PT+ ++T+L+   C+ G + EA +   +M +  L   +
Sbjct: 940  AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999

Query: 339  DIYESLVGIHLEKGNKAKALHLCEEMVSEG-LKPSTSY 375
              Y  L+     KG+ A A  L EEM  +G L  +T+Y
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1037



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 125/292 (42%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +L ++N L+H  +K       + +Y+ ++ N   P++ T  +L+  +C+   L+  + +L
Sbjct: 753  NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812

Query: 82   DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
                 +           LI +      I     L+K M    +  D      +V    + 
Sbjct: 813  KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872

Query: 142  RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
               + + +V  EM K+G S  S  Y   I   C  G I+ A  + +EM    + P +   
Sbjct: 873  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 202  NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            + ++   AK  + +E+      M+  KL+P+ ++F  ++   C+ GN  +A  +  +  +
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 262  KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             G   + ++Y+ LI G   +G++    +LY EM+          Y +LI  L
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 174/366 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G+  S  +F TLI  +    +     +++  M      P+  T  TLI+
Sbjct: 108 AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLIN 167

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G   T +  L  +  + C P V+V +++I  + ++ ++ E + L   ML K +  
Sbjct: 168 GLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP 227

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   YS +++    + + + A+ ++  M+ R    +   + T + A C+ G + +A+ ++
Sbjct: 228 NNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVV 287

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M  + LKP   T+N L++G      + ++++  + M+ +  +PS  ++  +I   C+ 
Sbjct: 288 DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKI 347

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A G+      +G  P+ +TY+ LI G    G +++ + L++EM      P L  Y
Sbjct: 348 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 407

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L   LC+  +L EA    K+++  +L P + IY  ++      G    A  L  ++ S
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS 467

Query: 367 EGLKPS 372
           +GL P 
Sbjct: 468 KGLHPD 473



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 166/372 (44%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +     + + ++  G   +  + N LI+     +R    + +   +L+    P+ AT
Sbjct: 67  MKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTAT 126

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC  G++   + + D++ G+   P V+   +LI  + +       +  L+ M 
Sbjct: 127 FTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSME 186

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++N     + YS I+ +  K R L  AL ++ +ML +G S N+F Y++ I   C  G  +
Sbjct: 187 QRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWK 246

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L   M +  + P   TFN L++   K   + ++    + M+   L P    +N ++
Sbjct: 247 EAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLM 306

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C      +   +    + KG  P+ I+Y+ LI GY K   + + + L+ EM  + + 
Sbjct: 307 DGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLI 366

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y +LI  LC  G+L +A   F  M  +  +P +  Y  L     +    A+A+ L
Sbjct: 367 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 426

Query: 361 CEEMVSEGLKPS 372
            + +    L P 
Sbjct: 427 LKVIEGTNLDPD 438



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 170/370 (45%), Gaps = 4/370 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    R +EQR    +++ ++T+I  + K  +      ++  ML     PN  T  +LI 
Sbjct: 178 AIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIH 237

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G  +  + +   +  ++  P  +   +L+  + +E  + +   ++  M++ ++  
Sbjct: 238 GLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKP 297

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++        +   + V++ M+++G   +   YTT I  YC+   +++A  L 
Sbjct: 298 DVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLF 357

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   GL P   T+N LI G     R+ ++++   +M+    +P    +  +   LC+ 
Sbjct: 358 EEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK- 416

Query: 247 GNAKQANGMLTLALDKG--FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
            N + A  M+ L + +G    P+   YS ++ G  + GE++    L+ ++  K + P + 
Sbjct: 417 -NHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVR 475

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT +I+ LCQ G L EA K F  M  +   P    Y  +    L      +A+ L +EM
Sbjct: 476 TYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEM 535

Query: 365 VSEGLKPSTS 374
           +S G     S
Sbjct: 536 LSRGFSIDVS 545



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 140/295 (47%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + + +R+   R  P ++  + L+  I + +     + L K+M    + H+T   ++++ +
Sbjct: 39  LSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINS 98

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              +  L  A  V  ++LK G+  ++  +TT I   C  GKI EA  L  +M   G +P 
Sbjct: 99  FCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPD 158

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI G  K      ++ +   M  R   P+   ++ +I  LC+     +A  + +
Sbjct: 159 VLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFS 218

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L KG SPN  TYS LI G    G  +E ++L+Y M ++ I P    + +L+ +LC+ G
Sbjct: 219 DMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEG 278

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + +A     +M    L P V  Y SL+  H  +    K +++ + MV +G  PS
Sbjct: 279 MVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 123/264 (46%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I++ + L  RMLR       + +S ++ +  +M++  + L +Y++M   G   N++    
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I ++C   ++  A  ++ ++   G +P   TF  LI G     +I E+L   ++M    
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P    +  +I  LC+ GN   A   L     +   P  + YS +I    K+ ++ E L
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            L+ +M  K ISP    Y+SLI  LC  G  +EA + F  M    ++P    + +LV   
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G   KA ++ + M+   LKP 
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPD 298



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 157/347 (45%), Gaps = 1/347 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S +  ++++LIH +          R++  M+     P++ T  TL+ ALCK G +  
Sbjct: 223 KGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVK 282

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++D +      P V+   SL+        + + + +   M+RK  +   I+Y+ ++ 
Sbjct: 283 AHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLIN 342

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K++ ++ A+ ++EEM ++G   ++  Y T I   C  G++ +A  L  EM   G  P
Sbjct: 343 GYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 402

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +L +   K  R+ E++   + +    L P    ++ ++  +C  G  + A  + 
Sbjct: 403 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 462

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
           +    KG  P+  TY+ +I G  ++G + E  KL+ EM+    SP    Y  +     + 
Sbjct: 463 SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRN 522

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG-NKAKALHLCE 362
            +   A + F+ M S      V     LV +  + G +++    LCE
Sbjct: 523 NETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCE 569



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 109/239 (45%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           +V   + ++G   S+IS+ TLI+   K    D    +++ M +    P+  T  TLI  L
Sbjct: 320 NVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C  G+L+  + +   +      P ++    L   + +  R+ E MVLLK +   N+  D 
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
             YS+++    +   LE+A  ++ ++  +G   +   YT  I   C+ G + EA+ L  E
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           M+  G  P   T+NL+  G  +      ++   ++M+SR      S    ++  L + G
Sbjct: 500 MDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 169/347 (48%), Gaps = 5/347 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N L+  + + +    V  +Y +M +    PN  T   LI ALC+  ++     MLD + 
Sbjct: 130 YNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMA 189

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            K C P  + +T++I  + + +R++E   +L  M      ++ + ++L    + +MR + 
Sbjct: 190 RKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALC--GQFRMREV- 246

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
              +V +EM+ RG   ++  YT+ +GA+C+  ++  A  ++  M   G  P  +TF +L+
Sbjct: 247 --FLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLV 304

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G     ++ ++L     M++    PS  ++N +IR LC  G+ K+A  + +        
Sbjct: 305 KGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCL 364

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+  TYS LI G++K G++   + ++ +M      P +  YT+++  LC+    ++A+  
Sbjct: 365 PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENL 424

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M   +  P    + +L+    + G   +AL++   M   G  P+
Sbjct: 425 IDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPN 471



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 157/340 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++H +    R   V+ +   M+     P+     +++ A CK  +L+    +L R+
Sbjct: 229 SYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARM 288

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             + C P V   T L+     + ++ + + +   M+ +     TI+Y++++     + +L
Sbjct: 289 VTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDL 348

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + AL V+  M K     +   Y+T I  + + G ++ A  +  +M NAG KP    +  +
Sbjct: 349 KRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNM 408

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++   K    +++ +  ++M      P+   FN +IR LC+ G A +A  +       G 
Sbjct: 409 VDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGC 468

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN+ TY+ L+ G  +EG  ++ L++  EM       +L +Y + IS LCQ   ++EA  
Sbjct: 469 PPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMI 528

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
               M    + P    + +++  + ++GN   A  +   M
Sbjct: 529 LLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRM 568



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 158/361 (43%), Gaps = 9/361 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G   ++ ++N LI  + ++DR     R+   M      P+E +  T+ISALCK   
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCK--- 209

Query: 74  LQTYVDMLDRIHG--KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
               +D LD   G     +P+     +++  +  + R+ E  +++  M+ + +  DT+AY
Sbjct: 210 ----LDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAY 265

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + IV A  K R L  A  +   M+  G   N   +T  +  + + GK+ +A  +   M  
Sbjct: 266 TSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVA 325

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G  P   ++N+LI G      ++ +L     M     LP    ++ +I    + G+   
Sbjct: 326 EGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDV 385

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +     + G  PN + Y++++    K+    +   L  +M  ++  P    + +LI 
Sbjct: 386 AMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIR 445

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           SLC  G+   A   F  M+ +   P    Y  L+     +GN   AL +  EM++ G + 
Sbjct: 446 SLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFEL 505

Query: 372 S 372
           S
Sbjct: 506 S 506



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 160/358 (44%), Gaps = 8/358 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +L+     T+  +    D + + + + +  L  +  P E  +   I A  + G     
Sbjct: 51  GEALARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACP-EGALVAAICAFARAGAADRA 109

Query: 78  VDMLDRI-HGKRCS-PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           +    R  H   C+ P V V   L+  +++E  +   + +   M +  +  +   Y+L++
Sbjct: 110 LKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLI 169

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A  +   + +A  + +EM ++G   +   +TT I A C+  +++EA  ++ EM      
Sbjct: 170 KALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----T 224

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N ++       R+ E     ++M+ R L P   A+  ++   C+    + A  +
Sbjct: 225 PVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAI 284

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   + +G  PN  T++ L+ G+  +G++ + L ++  M  +  +P+  +Y  LI  LC 
Sbjct: 285 LARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCH 344

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G L+ A   F  M     +P V  Y +L+    + G+   A+ +  +M + G KP+ 
Sbjct: 345 IGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNV 402



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 148/330 (44%), Gaps = 20/330 (6%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           R+Y H+L+               AL +   +   V + D +      P V     LI  +
Sbjct: 128 RVYNHLLD---------------ALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKAL 172

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            Q +R+     +L  M RK    D ++++ I+ A  K+  L+ A  +  EM   G S N+
Sbjct: 173 CQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNA 232

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
            V+     A C   ++ E   ++ EM + GL+P    +  ++    KA+ +  + +   +
Sbjct: 233 VVH-----ALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILAR 287

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M++   +P+   F  +++   + G    A GM    + +G++P+ I+Y+ LI G    G+
Sbjct: 288 MVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGD 347

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           ++  L ++  M      P +  Y++LI    + G L+ A   +  M +    P V +Y +
Sbjct: 348 LKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTN 407

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +V +  +K    +A +L ++M  E   P+T
Sbjct: 408 MVDVLCKKVMFDQAENLIDKMSLENCPPNT 437



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/402 (21%), Positives = 161/402 (40%), Gaps = 38/402 (9%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ EV F V   +  RG     +++ +++    K+    +   I   M+     PN  T 
Sbjct: 242 RMREV-FLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTF 300

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+      G++   + M + +  +  +P  I    LI  +     ++  + +   M +
Sbjct: 301 TVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGK 360

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT-------------- 167
            + + D   YS ++    K  +L+ A+ ++ +M   G   N  VYT              
Sbjct: 361 SDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQ 420

Query: 168 ---------------------TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
                                T I + C+ G+   A  +   M   G  P D T+N L+ 
Sbjct: 421 AENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLH 480

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  +    E++L    +M++     S  ++N  I  LC+    K+A  +L   + +G  P
Sbjct: 481 GLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQP 540

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +  T++ +I  Y KEG ++    +   M+  +    + AYTSL+S LC   KL++A  Y 
Sbjct: 541 DAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYL 600

Query: 327 KIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSE 367
             M    + P    +  LV GI    G     +HL + ++ +
Sbjct: 601 LKMLYEGICPNEATWNVLVRGIFTHLGTIGP-MHLIDHIIED 641


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 174/367 (47%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R +E RG   +++S+N ++    +    DL   ++ +MLE    PN  T   LI 
Sbjct: 461 ATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILID 520

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMI 125
              K    Q  +++++++         +V  ++I  + +  +  +   LL  M+  K   
Sbjct: 521 GCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFC 580

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              ++Y+ I+   +K   ++ A+  YEEM   G S N   YT+ +   C+  ++++A  +
Sbjct: 581 VSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEM 640

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             EM+N G+K     +  LI G  K   +E + +   +++   L PS   +N +I     
Sbjct: 641 RDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRN 700

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN   A  +    L  G   +  TY+ LI G  KEG +     LY EM+   + P    
Sbjct: 701 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIM 760

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT +++ L + G+  +  K F+ MK +++ P V IY +++  H  +GN  +A  L +EM+
Sbjct: 761 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 820

Query: 366 SEGLKPS 372
            +G+ P 
Sbjct: 821 DKGILPD 827



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/404 (21%), Positives = 176/404 (43%), Gaps = 37/404 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A +  + +E  G + S+   +T+I    K  +++   +++    E     N     T+
Sbjct: 390 EKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE-TGLANVFICNTI 448

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +S LCK G++    ++L ++  +   P V+   +++L   +++ ++    +   ML K +
Sbjct: 449 LSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGL 508

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   YS+++    K  + ++ L V  +M       N  VY T I   C+ G+  +A  
Sbjct: 509 KPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 568

Query: 185 LM------------------------------------QEMENAGLKPYDETFNLLIEGC 208
           L+                                    +EM   G+ P   T+  L++G 
Sbjct: 569 LLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGL 628

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K  R++++L   ++M ++ +     A+  +I   C+  N + A+ + +  L++G +P++
Sbjct: 629 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQ 688

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             Y+ LI G+   G +   L LY +M    +   L  YT+LI  L + G L  A   +  
Sbjct: 689 PVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTE 748

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M++  LVP   +Y  +V    +KG   K + + EEM    + P+
Sbjct: 749 MQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 792



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 158/352 (44%), Gaps = 35/352 (9%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N      L++A  K  Q    VD+++++      P V      +  ++Q   I E   L 
Sbjct: 161 NSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELY 220

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
            RM+   +  D     L++ A ++      AL V+   ++RG   +S +Y+  + A C+ 
Sbjct: 221 SRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKT 280

Query: 177 GKIEEANCLMQEMENAGL-KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             +  AN L++EM+   L  P  ET+  +I    K   +E+++ + ++M+S  +  +  A
Sbjct: 281 LNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVA 340

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
              +I   C+  +   A  +     ++G SPN +T+S LI  ++K GE+++ L+ Y +ME
Sbjct: 341 ATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKME 400

Query: 296 YKSISPTLPAYTSLI----------------------------------SSLCQCGKLEE 321
              ++P++    ++I                                  S LC+ GK+++
Sbjct: 401 SLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDK 460

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A +  + M+S  + P V  Y +++  H  K N   A  +   M+ +GLKP+ 
Sbjct: 461 ATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNN 512



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 160/364 (43%), Gaps = 36/364 (9%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRI 103
           ++   +E    P+       + A CK   L     +L  +  K+ C P     TS+IL  
Sbjct: 254 VFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILAS 313

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           +++  +E+ +     M+   +  + +A + ++    K  +L SAL ++ +M   G S NS
Sbjct: 314 VKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNS 373

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP------------------------YDE 199
             ++  I  + + G++E+A    ++ME+ GL P                        +DE
Sbjct: 374 VTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 433

Query: 200 TF----------NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           +F          N ++    K  +I+++     +M SR + P+  ++N ++   C   N 
Sbjct: 434 SFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNM 493

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  + +  L+KG  PN  TYS LI G  K  + Q VL++  +M   +I      Y ++
Sbjct: 494 DLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTI 553

Query: 310 ISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           I+ LC+ G+  +A +    +++          Y S++   +++G    A+   EEM + G
Sbjct: 554 INGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANG 613

Query: 369 LKPS 372
           + P+
Sbjct: 614 ISPN 617



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 2/274 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E++ F +S +S+N++I    K    D     Y+ M  N   PN  T  +L+  LCK  +
Sbjct: 574 IEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNR 633

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   ++M D +  K     +    +LI    ++  +E    L   +L + +      Y+ 
Sbjct: 634 MDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNS 693

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     + N+ +AL +Y++MLK G   +   YTT I    + G +  A+ L  EM+  G
Sbjct: 694 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVG 753

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P +  + +++ G +K  +  + +   E+M    + P+   +N +I      GN  +A 
Sbjct: 754 LVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 813

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            +    LDKG  P+  T+  L+ G  K G+ Q +
Sbjct: 814 RLHDEMLDKGILPDGATFDILVSG--KVGKFQPI 845



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 167/394 (42%), Gaps = 47/394 (11%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF ++  +FN L++  +K  + D    I   MLE    P    +   +SAL +   +   
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 78  VDMLDR-----IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            ++  R     + G   +  +++  SL     +EE+  E + +  R + +    D++ YS
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASL-----REEKPAEALEVFSRAIERGAEPDSLLYS 271

Query: 133 L------------------------------------IVYAKVKMRNLESALVVYEEMLK 156
           L                                    ++ A VK  N+E A+   +EM+ 
Sbjct: 272 LAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVS 331

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G S N    T+ I  +C+   +  A  L  +MEN G  P   TF++LIE  +K   +E+
Sbjct: 332 DGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEK 391

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +L + ++M S  L PS    + +I+   +    ++A  +   + + G + N    + ++ 
Sbjct: 392 ALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFICNTILS 450

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K+G+I +  +L  +ME + I P + +Y +++ + C+   ++ A   F  M    L P
Sbjct: 451 WLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKP 510

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
               Y  L+    +  ++   L +  +M S  ++
Sbjct: 511 NNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIE 544



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 1/248 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           A++ ++ A  K R  + A+ +  +ML+ G           + A  +   I EA  L   M
Sbjct: 164 AFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRM 223

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G+   + T  LL+    + ++  E+L    + + R   P    ++  ++  C+  N 
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNL 283

Query: 250 KQANGMLTLALDKGF-SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             AN +L    +K    P++ TY+ +I    K+G +++ ++   EM    IS  + A TS
Sbjct: 284 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATS 343

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI+  C+   L  A   F  M++    P    +  L+    + G   KAL   ++M S G
Sbjct: 344 LITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLG 403

Query: 369 LKPSTSYL 376
           L PS  ++
Sbjct: 404 LTPSVFHV 411


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 176/368 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   + QRG S  L ++N +++ + K+   D    I + M++    P+  T  +LI 
Sbjct: 235 ACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIY 294

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                GQ +  V +  ++  +   P V+   SL+  + +  +I++   +   M  K    
Sbjct: 295 GYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKT 354

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  +Y +++        L     ++  ML  G + +S ++   I AY + G ++ A  + 
Sbjct: 355 DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIF 414

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G++P   T++ +I    +  ++++++    QM+ + + PS S ++ +I+  C  
Sbjct: 415 NEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTH 474

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  ++   ++KG  P+   ++ +I    K G + +   ++       + P +  Y
Sbjct: 475 GDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVY 534

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            +L+   C  GK+E A + F +M S  + P V +Y +LV  + + G   + L L  E++ 
Sbjct: 535 NTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILH 594

Query: 367 EGLKPSTS 374
           +G+KPST+
Sbjct: 595 KGIKPSTT 602



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 170/368 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A  + R +  +G      ++N+LI+  + + +     R+ + M      P+  T+
Sbjct: 265 RAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTL 324

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L+++LCK G+++   D+ D +  K     +     ++     +  + +   L   ML 
Sbjct: 325 NSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS 384

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  D+  +++++ A  K   L+ A +++ EM ++G   +   Y+T I A C  GK+++
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A     +M + G+ P   T++ LI+G      + ++     QMM++ + P    FN +I 
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G    A  +    +  G  PN + Y+ L+ GY   G+++  L+++  M    I P
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +L++  C+ G+++E    F+ +    + P   +Y  ++    + G    A    
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKF 624

Query: 362 EEMVSEGL 369
            EM   G+
Sbjct: 625 HEMTESGI 632



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 181/401 (45%), Gaps = 38/401 (9%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R    R  S +L ++  L+   T++ R  L    +  +L+     +   I  L+  LC
Sbjct: 95  VSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLC 154

Query: 70  KGGQLQTYVD-MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI--H 126
           +  +    +D +L R+    C P V     ++  +  + +  +   LL+ M     +   
Sbjct: 155 EAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLP 214

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + +AY+ ++    K  ++  A  ++ EM++RG S +   Y   + A C+   +++A  ++
Sbjct: 215 NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAIL 274

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G+ P + T+N LI G +   + +E++   ++M S+ +LP     N ++  LC+ 
Sbjct: 275 RQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKH 334

Query: 247 GNAKQA-----------------------NG------------MLTLALDKGFSPNEITY 271
           G  K A                       NG            +  L L  G +P+   +
Sbjct: 335 GKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIF 394

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI  YAK G +     ++ EM  + + P +  Y+++I++LC+ GK+++A + F  M  
Sbjct: 395 NVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMID 454

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + P +  Y  L+      G+  KA  L  +M+++G++P 
Sbjct: 455 QGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 161/349 (46%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++NT+I    K    +    ++  M++    P+ +T   +++ALCK   +     +L +
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQ 276

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K   P      SLI       + +E + + K+M  + ++ D +  + ++ +  K   
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A  V++ M  +G   + F Y   +  Y   G + +   L   M + G+ P    FN+
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+  AK   ++ +     +M  + + P    ++ +I  LC  G    A       +D+G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +P+  TY  LI G+   G++ +   L  +M  K + P +  +  +I++LC+ G++ +A 
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F    S  L P V +Y +L+  +   G    AL + + MVS G++P+
Sbjct: 517 NIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPN 565



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 158/351 (45%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI    K    D    I+  M E    P+  T  T+I+ALC+ G++   V+  +++ 
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  +P +     LI        + +   L+ +M+ K M  D   ++ I+    K+  + 
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +++  +  G   N  VY T +  YC  GK+E A  +   M +AG++P    +  L+
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  RI+E LS   +++ + + PS + +N ++  L + G    A        + G +
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            +  TYS ++GG  K     E + L+ E+   ++   +     +I+ + Q  ++EEA   
Sbjct: 634 MDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDL 693

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           F  +    LVP V  Y  ++   +++G   +A  +   M + G +   S L
Sbjct: 694 FASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQL 744



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/321 (21%), Positives = 141/321 (43%), Gaps = 1/321 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +  +G    +  FN +I+ + K  R      I+   +    +PN     TL+ 
Sbjct: 480 AKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMD 539

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+++  + + D +      P V+V  +L+    +  RI+EG+ L + +L K +  
Sbjct: 540 GYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKP 599

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            T  Y++I++   +      A V + EM + G + + + Y+  +G   +    +EA  L 
Sbjct: 600 STTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLF 659

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E+    +K    T N++I G  + +R+EE+      +    L+PS   ++ M+  L + 
Sbjct: 660 KELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKE 719

Query: 247 GNAKQANGMLTLALDKGF-SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
           G  ++A+ M +   + G   PN    +H++    ++ EI        +++ +S S     
Sbjct: 720 GLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHST 779

Query: 306 YTSLISSLCQCGKLEEADKYF 326
            T LI      G   E  ++ 
Sbjct: 780 TTLLIDLFSSKGTCREHIRFL 800



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 5/185 (2%)

Query: 204 LIEGCAKAKRIEESLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           L+ G  +AKR  E+L     +M     +P   ++  +++ LC    + QA+ +L +  + 
Sbjct: 149 LLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG 208

Query: 263 GFS--PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           G    PN + Y+ +I G+ KEG++ +   L+ EM  + ISP L  Y  ++++LC+   ++
Sbjct: 209 GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMD 268

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS-- 378
           +A+   + M    ++P    Y SL+  +   G   +A+ + ++M S+G+ P    L S  
Sbjct: 269 KAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLM 328

Query: 379 ASTCR 383
           AS C+
Sbjct: 329 ASLCK 333


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 167/360 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G   ++ ++   I V+ ++ R D   RI + M ++   P+  T   LI ALC  G+
Sbjct: 255 MESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGK 314

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   +++  ++      P  +   +++ +      +         M       D I +++
Sbjct: 315 LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTI 374

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V A  K  N++ A  + + M K+G   N   Y T I       ++++A  L   ME  G
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+ L I+   K+ R +++L   E+M  R + P+  A N  +  L E G  ++A 
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G +P+ +TY+ ++  Y+K G++ E ++L  +M      P +    SLI++L
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL 554

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G+++EA K F  +K   L P V  Y +L+    ++G   +A+ L   M   G  P+T
Sbjct: 555 YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 158/363 (43%), Gaps = 35/363 (9%)

Query: 12   RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
            R+ ++ G   +L S+N LI        +++ W ++  M      P+  T   L+ A  K 
Sbjct: 779  RFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKS 838

Query: 72   GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            G++    ++ +++    C P                                   +TI +
Sbjct: 839  GKINELFELYEQMICSSCKP-----------------------------------NTITH 863

Query: 132  SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
            ++I+   VK  +L+ AL ++ +++   FS     Y   +    + G++EEA  L +EM +
Sbjct: 864  NIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVD 923

Query: 192  AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             G +P +  +N+LI G  K   +  +    ++M+   + P   ++  ++  LCE G    
Sbjct: 924  YGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDD 983

Query: 252  ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            A          G   + I Y+ +I G  +   I+E L LY EM+ + I+P L  Y SLI 
Sbjct: 984  ALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLIL 1043

Query: 312  SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            +L   G +E+A K ++ ++   L P V  Y +L+  +   GN   A  + + M+  G  P
Sbjct: 1044 NLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSP 1103

Query: 372  STS 374
            +T 
Sbjct: 1104 NTG 1106



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 161/346 (46%), Gaps = 5/346 (1%)

Query: 36  SDRNDL--VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMV 93
           SD  DL  V   +  M  +   P+  T   L++ALCK G +     +LD +  +   P +
Sbjct: 345 SDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNL 404

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
               +LI  +++  R+++ + L   M    ++     Y L +    K    + AL  +E+
Sbjct: 405 HTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEK 464

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M  RG + N       + +  E G++ EA  +   +++ GL P   T+N++++  +KA +
Sbjct: 465 MKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQ 524

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           ++E++     M   +  P     N +I  L + G   +A  M     D   +P  +TY+ 
Sbjct: 525 VDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNT 584

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI G  KEG++Q  ++L+  M      P    + +++  LC+  +++ A K    M + +
Sbjct: 585 LIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN 644

Query: 334 LVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            +P V  + +++ G+ +EK   + A+ L  +M  + L P    LC+
Sbjct: 645 CMPDVLTFNTIIHGLVIEK-RVSDAIWLFHQM-KKMLTPDCVTLCT 688



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 146/305 (47%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E+A+++   ++  G +  + ++N L+    KS + + ++ +Y+ M+ +   PN  T   +
Sbjct: 807  EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNII 866

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            I+ L K   L   +D+   +     SP       L+  +++  R+EE   L + M+    
Sbjct: 867  IANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGC 926

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +   Y++++    K  ++ +A  +++ M++ G   +   YT+ +G  CE G++++A  
Sbjct: 927  RPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALH 986

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
              ++++  GL      +NL+I+G  ++ RIEE+L+  ++M SR + P    +N +I  L 
Sbjct: 987  YFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLG 1046

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              G  +QA  +       G  PN  TY+ LI GY+  G       +Y  M     SP   
Sbjct: 1047 VAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTG 1106

Query: 305  AYTSL 309
             +  L
Sbjct: 1107 TFAQL 1111



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 1/284 (0%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             LI  ++Q     E + + +RM+ + +      +S ++ A  K R+ E+   + EEM  
Sbjct: 198 NGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMES 257

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G   N + YT  I      G+I+EA  +M+ ME+ G  P   T+ +LI+    A ++++
Sbjct: 258 LGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDD 317

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           ++    +M +    P    +  M+ +  +CG+  +     +     G++P+ IT++ L+ 
Sbjct: 318 AMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVN 377

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K G I E   L   M  + + P L  Y +LIS L +  +L++A   F  M++  +VP
Sbjct: 378 ALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVP 437

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAS 380
               Y   +  + + G   KAL   E+M   G+ P+    C+AS
Sbjct: 438 TAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNI-VACNAS 480



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 39/409 (9%)

Query: 11  CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           CR L+    + +++++NTLI  + K  +      ++  M  N   PN  T  T++  LCK
Sbjct: 568 CR-LKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCK 626

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
             ++   + ML ++    C P V+   ++I  ++ E+R+ + + L  +M +K +  D + 
Sbjct: 627 NDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVT 685

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGA----------------- 172
              ++   VK   +E A  + E+ + R G   +   +   +G                  
Sbjct: 686 LCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRL 745

Query: 173 ----YCEYGKI-----------EEA----NCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
                C+ G +           ++A    +  ++  +  G+KP  E++N LIEG      
Sbjct: 746 VCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHN 805

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
            E + +   +M +    P    +N ++    + G   +   +    +     PN IT++ 
Sbjct: 806 DEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNI 865

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           +I    K   + + L L+Y++     SPT   Y  L+  L + G+LEEA + F+ M  + 
Sbjct: 866 IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
             P   IY  L+    + G+   A  L + MV EG++P      S   C
Sbjct: 926 CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGC 974



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 157/355 (44%), Gaps = 13/355 (3%)

Query: 22  SLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
            +++FNT+IH +V +   +D +W  +Q  ++ +  P+  T+ TL+  + K G ++    +
Sbjct: 648 DVLTFNTIIHGLVIEKRVSDAIWLFHQ--MKKMLTPDCVTLCTLLPGVVKNGLMEDAFKI 705

Query: 81  L-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
             D +H             L+  I+ +   E+ ++   R++   +  D      I+    
Sbjct: 706 AEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLC 765

Query: 140 KMRNLESALVVY-----EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           K +    A  V+     E  +K    + +F+   F+G + +    E A  L  EM+NAG 
Sbjct: 766 KHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHND----EMAWNLFTEMKNAGC 821

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+NLL++   K+ +I E     EQM+     P+    N +I  L +  +  +A  
Sbjct: 822 APDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALD 881

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +    +   FSP   TY  L+ G  K G ++E  +L+ EM      P    Y  LI+   
Sbjct: 882 LFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFG 941

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + G +  A + FK M    + P +  Y SLVG   E G    ALH  E++   GL
Sbjct: 942 KTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 4/286 (1%)

Query: 91  PMVIVNTSL---ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN-LES 146
           P V+  T     +L I++  R    MV++  +++  +I   +   LI++  + +R  L  
Sbjct: 118 PFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQ 177

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
               + +M + GF  N++ Y   I    + G   EA  + + M   GLKP  +TF+ L+ 
Sbjct: 178 TPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMV 237

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              K +  E   S  E+M S  L P+   +   IR L   G   +A  ++    D G  P
Sbjct: 238 ATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGP 297

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + +TY+ LI      G++ + ++L+ +M+  S  P    Y +++     CG L    +++
Sbjct: 298 DVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFW 357

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             M++    P V  +  LV    + GN  +A HL + M  +G+ P+
Sbjct: 358 SEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPN 403



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 136/306 (44%), Gaps = 18/306 (5%)

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT-------------- 128
           RIH +R   MV+V   +  +II+ + +   +++ K +  +  +  T              
Sbjct: 135 RIH-RRVGDMVVVFNLMQNQIIKRD-LNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHL 192

Query: 129 --IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              +Y+ +++  ++      AL +Y  M+  G   +   ++  + A  +    E    L+
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EME+ GLKP   T+ + I    +A RI+E+    ++M      P    +  +I  LC  
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +          P+ +TY  ++  ++  G++  V + + EME    +P +  +
Sbjct: 313 GKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITF 372

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T L+++LC+ G ++EA     +M+   ++P +  Y +L+   L       AL L   M +
Sbjct: 373 TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET 432

Query: 367 EGLKPS 372
            G+ P+
Sbjct: 433 LGVVPT 438



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/363 (20%), Positives = 164/363 (45%), Gaps = 8/363 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + ++G   +L ++NTLI  + + +R D    ++ +M      P   T    I 
Sbjct: 388 AFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFID 447

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G+    ++  +++  +  +P ++   + +  + +  R+ E  V+  R+    +  
Sbjct: 448 FYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAP 507

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D++ Y++++    K   ++ A+ +  +M +     +  V  + I    + G+++EA  + 
Sbjct: 508 DSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMF 567

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             +++  L P   T+N LI G  K  +++ ++     M      P+   FN ++  LC+ 
Sbjct: 568 CRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKN 627

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                A  ML         P+ +T++ +I G   E  + + + L+++M+ K ++P     
Sbjct: 628 DEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTL 686

Query: 307 TSLISSLCQCGKLEEADKYFKIMKS--HSLVPGVD--IYESLVGIHLEKGNKAKALHLCE 362
            +L+  + + G +E+A   FKI +   H L   VD   +E L+G  L +    K +   +
Sbjct: 687 CTLLPGVVKNGLMEDA---FKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGD 743

Query: 363 EMV 365
            +V
Sbjct: 744 RLV 746



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 149/363 (41%), Gaps = 41/363 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + GF L+  S+N LIH++ +S        +Y+ M+     P+  T   L+ A  K   
Sbjct: 185 MREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRD 244

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +T   +L+ +      P +   T  I  + +  RI+E   ++KRM              
Sbjct: 245 TETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRM-------------- 290

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
                             E+    G   +   YT  I A C  GK+++A  L  +M+ + 
Sbjct: 291 ------------------ED---DGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS 329

Query: 194 LKPYDETFNLLIE---GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            KP   T+  +++    C    R++E   +  +M +    P    F  ++  LC+ GN  
Sbjct: 330 HKPDRVTYITMLDKFSDCGDLGRVKE---FWSEMEADGYAPDVITFTILVNALCKAGNID 386

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L +   +G  PN  TY+ LI G  +   + + L L+  ME   + PT   Y   I
Sbjct: 387 EAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFI 446

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
               + G+ ++A + F+ MK   + P +    + +    E G   +A  +   + S GL 
Sbjct: 447 DFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLA 506

Query: 371 PST 373
           P +
Sbjct: 507 PDS 509


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 172/393 (43%), Gaps = 36/393 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRTLISALCKGGQ 73
           Q G   S++++NTL+    +  R D   ++ + M        P++ T   +I+ L + G+
Sbjct: 224 QLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGE 283

Query: 74  LQTYVDMLDRIH-GKRCS---------------------------------PMVIVNTSL 99
           L+    ++DR+   K+ S                                 P V+   ++
Sbjct: 284 LEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTI 343

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           I  + +   +E   +    M    ++ D I Y+ ++    K  NL+ AL ++ ++ + G 
Sbjct: 344 IHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGL 403

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           + +   Y   +  YC  G +EEA    QEM   G +P   T+ +L+ G  K + +     
Sbjct: 404 APSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVRE 463

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + ++M+S+ L P C A+N  I      G+  +A  +  + + +G S + +TY+  + G  
Sbjct: 464 FFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLC 523

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K G +++   L+ +M    + P    YT LI + C+ G+L EA   F  M    L P   
Sbjct: 524 KSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAV 583

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y   +  +  +GN   A    ++M+ EG++P+
Sbjct: 584 TYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPN 616



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 163/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G   +++++NT+IH + +S   +     +  M      P+  T  +LI+  CK G 
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  + +   +     +P V+    L+    +   +EE     + M+ +    D   Y++
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+RNL      ++EML +G   + F Y T I A    G   EA  L + M + G
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +     T+N+ ++G  K+  ++++     +M+S  L P C  +  +I   CE G  ++A 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L  G  P+ +TY+  I  Y + G +      + +M  + + P    Y  LI +L
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G+   A ++F  M    L P    Y  L+  + ++GN  +A+ L  EM   G+ P 
Sbjct: 628 CRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 3/285 (1%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRK--NMIHDTIAYSLIVYAKVKMRNLESAL 148
           P ++   +L+    +E R+++   LL+ M  +    +   + Y++++    +   LE A 
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA 288

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            + + M +    A++F +   I  Y   G +E+A  L  EMEN G+ P   T+N +I G 
Sbjct: 289 QLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGM 347

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            ++  +E +     +M +  LLP    +N +I   C+ GN K+A  +       G +P+ 
Sbjct: 348 FRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSV 407

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           +TY+ L+ GY + G+++E  +   EM  +   P +  YT L++   +   L    ++F  
Sbjct: 408 LTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDE 467

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           M S  L P    Y + +   L  G+ ++A  L E M+S G+   T
Sbjct: 468 MLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDT 512



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 5/228 (2%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME--NAGLKPYDETFNLLIEG 207
           VY EML+ G   +   Y T + ++   G++++A  L++EME    G  P D T+N++I G
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277

Query: 208 CAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
            A+   +E++    ++M MS+K   S   FN +I      G+ ++A  +     ++G  P
Sbjct: 278 LARKGELEKAAQLVDRMRMSKKA--SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVP 335

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
             +TY+ +I G  + G ++     + EM    + P L  Y SLI+  C+ G L+EA   F
Sbjct: 336 TVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLF 395

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             +K   L P V  Y  L+  +   G+  +A    +EMV +G +P  S
Sbjct: 396 GDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVS 443



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 135/311 (43%), Gaps = 36/311 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L++ G + S++++N L+    +    +   R  Q M+E    P+ +T   L++   K   
Sbjct: 398 LKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRN 457

Query: 74  LQTYVDMLDRIHGKRCSP------------MVIVNTS--------LILRIIQEERI---- 109
           L    +  D +  K   P            +++ +TS        +I R I  + +    
Sbjct: 458 LAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNI 517

Query: 110 -----------EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
                      ++  VL  +M+   +  D I Y+ +++A  +   L  A  +++ ML  G
Sbjct: 518 FLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSG 577

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              ++  YT FI AYC  G +  A    Q+M   G++P + T+N+LI    +  R   + 
Sbjct: 578 LPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAY 637

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            +  +M+ R L P+   +  +I   C+ GN ++A  + +     G  P+  T++ L  G+
Sbjct: 638 QHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697

Query: 279 AKEGEIQEVLK 289
             EG+ +  ++
Sbjct: 698 -DEGQSKHAIQ 707



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 1/219 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +  RG S   +++N  +  + KS      + ++  M+ +   P+  T   LI 
Sbjct: 496 AFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIH 555

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C+ G+L+   D+ D +      P  +  T  I    +   +       ++ML + +  
Sbjct: 556 AHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRP 615

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+++++A  +M     A   + EML+RG S N + YT  I   C+ G  EEA  L 
Sbjct: 616 NEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLY 675

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
            EM   G+ P   T N L +G  + +  + ++ Y E ++
Sbjct: 676 SEMHQHGIHPDHCTHNALFKGFDEGQS-KHAIQYMENVV 713



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 36/223 (16%)

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            +EM + G+ P+ +  NL++       R ++  S   +M+   + PS   +N ++     
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 246 CGNAKQANGML--TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL------------- 290
            G   QA  +L    A   G  P+++TY+ +I G A++GE+++  +L             
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF 303

Query: 291 --------YY-------------EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
                   Y+             EME + I PT+  Y ++I  + + G +E A   F  M
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++  L+P +  Y SL+  + + GN  +AL L  ++   GL PS
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPS 406



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 3/157 (1%)

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           L+   +M    + P     N ++R L +         +    L  G  P+ +TY+ L+  
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 278 YAKEGEIQEVLKLYYEMEYKSIS--PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
           + +EG + +  KL  EME +     P+   Y  +I+ L + G+LE+A +    M+  S  
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRM-SKK 299

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                +  L+  +  +G+  KA  L  EM +EG+ P+
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPT 336


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 171/370 (46%), Gaps = 2/370 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A +V R +  R       +++TL+H +    R D    +   M     +PN      L
Sbjct: 192 DQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVL 251

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ISALCK G L     ++D +  K C P  +   SL+  +  + ++++ M LL RM+    
Sbjct: 252 ISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 311

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + + I +  +V   VK       + V   + ++G+  N F Y++ I    + GK E    
Sbjct: 312 VPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 371

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM   G KP    ++ LI+G  +  + +E+  Y  +M ++   P+   ++ ++    
Sbjct: 372 LWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYF 431

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E G+  +A  +     D   + +E+ YS LI G  K G+++E L ++ +M  + I   + 
Sbjct: 432 EAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVV 491

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHS--LVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           AY+S+I   C    +E+  K F  M  H+  L P V  Y  L+     K + ++A+ +  
Sbjct: 492 AYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILN 551

Query: 363 EMVSEGLKPS 372
            M+ +G  P 
Sbjct: 552 TMLDQGCDPD 561



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY----PNEATIRTLISALCKGGQLQTYVDM 80
           SFNT+++VV +    DL    Y H++++  +    PN  +   +I ALC+ G        
Sbjct: 138 SFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGN------- 190

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
                                       +++ + + + M  +N + D   YS +++    
Sbjct: 191 ----------------------------VDQAVEVFRGMSDRNCVADGYTYSTLMHGLCN 222

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              ++ A+ + +EM   G   N   +   I A C+ G +  A+ L+  M   G  P + T
Sbjct: 223 EGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVT 282

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N L+ G     ++++++S   +M++ K +P+   F  ++    + G A     +L    
Sbjct: 283 YNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLE 342

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           +KG+  NE +YS LI G  KEG+ +  ++L+ EM  K   P    Y++LI  LC+ GK +
Sbjct: 343 EKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPD 402

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           EA +Y   MK+    P    Y SL+  + E G+  KA+ + +EM   
Sbjct: 403 EAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDN 449



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/290 (17%), Positives = 113/290 (38%), Gaps = 58/290 (20%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE++G+  +  S+++LI  + K  + +   ++++ M+E    PN      LI  LC+ G+
Sbjct: 341 LEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGK 400

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSL---------------------------------- 99
                + L  +  K  +P     +SL                                  
Sbjct: 401 PDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSI 460

Query: 100 -ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML--K 156
            I  + +  +++E +++ K+ML + +  D +AYS +++     + +E  + ++ +ML   
Sbjct: 461 LINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHN 520

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY------------------- 197
                +   Y   + A+C    +  A  ++  M + G  P                    
Sbjct: 521 PKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQ 580

Query: 198 --DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
              E  + L+    K +R   + +  E M+ + LLP  S +   +++LC+
Sbjct: 581 DGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCK 630


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 171/364 (46%), Gaps = 7/364 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R +  RG    ++++NT+I  + K  + D    + + M +    P   T  TLI 
Sbjct: 133 ARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLID 192

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  +LQ   ++ +++    C+      + L  ++ +  ++ E   +   M RKN+  
Sbjct: 193 HLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCM 252

Query: 127 DTIAYSLIVYAKVKMR--NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               YSL+V    KM   N+E+A +V  EM+ +  + + + Y+  I   C+  +  EA  
Sbjct: 253 TDNTYSLVVLGLSKMDGGNVEAAKLV-TEMMGKKIAPDFYAYSILINGLCKARRPGEAKE 311

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + QEM   G+ P   T+N L+EG     ++++++     M+ +  LP   ++N MIR  C
Sbjct: 312 MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFC 371

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY----KSIS 300
             G+  +A  +    +  G   N  TY+ +I G+ K+        L+  M+     K  +
Sbjct: 372 ANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPA 431

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y  LISSLC+  ++EEA K    M+    VP + I+E L+      G    A  L
Sbjct: 432 PNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFEL 491

Query: 361 CEEM 364
            +EM
Sbjct: 492 YKEM 495



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 142/326 (43%), Gaps = 39/326 (11%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           MLE   +PN      LIS LCK G L      L R+  + C+P V+              
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVV-------------- 45

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
                                +Y++I+    K RN+E AL    EM + G       Y++
Sbjct: 46  ---------------------SYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSS 84

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            + ++C+ G + +A  +  EM   G +P    FN+L+ G  +A++I E+      M SR 
Sbjct: 85  IVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRG 144

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P    +N MI  LC+     +A  +L     +  SP  +TY+ LI    K   +Q+  
Sbjct: 145 CKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAY 204

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +++ +M     + T PAY+ L + L + GKL EA + +  M   ++    + Y SLV + 
Sbjct: 205 EVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTY-SLVVLG 263

Query: 349 LEK--GNKAKALHLCEEMVSEGLKPS 372
           L K  G   +A  L  EM+ + + P 
Sbjct: 264 LSKMDGGNVEAAKLVTEMMGKKIAPD 289



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 172/419 (41%), Gaps = 49/419 (11%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           +L E  F + R ++Q   S + +++ TLI  + K  R    + +++ M E      E   
Sbjct: 164 KLDEAVFLLER-MKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAY 222

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMV-IVNTSLILRIIQEERIEEGMV----LL 116
             L + L + G+L        R++   C   V + + +  L ++   +++ G V    L+
Sbjct: 223 SVLFNKLQRAGKLVE----ASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLV 278

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF------- 169
             M+ K +  D  AYS+++    K R    A  +++EM  RG S     Y T        
Sbjct: 279 TEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLST 338

Query: 170 ----------------------------IGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                                       I  +C  G   EA CL Q+M   G+     T+
Sbjct: 339 AKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTY 398

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRK----LLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           N +I G  K +    +    ++M S K      P+   +  +I  LC+    ++A  +L+
Sbjct: 399 NFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLS 458

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              DKGF P+   +  L+   A+ G + +  +LY EM   +    + +   L+  + + G
Sbjct: 459 AMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRG 518

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            ++EA  + K M    +VP    Y+ LV     +G   +A  L EE+V +G +P    L
Sbjct: 519 SVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGL 577



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/366 (20%), Positives = 162/366 (44%), Gaps = 1/366 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E A    R +E+ G   +  ++++++    K+        ++  M      P+    
Sbjct: 58  RNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNF 117

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+S L +  ++    ++   ++ + C P V+   ++I  + + ++++E + LL+RM +
Sbjct: 118 NVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQ 177

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +++    + Y+ ++    K   L+ A  V+E+M +   +     Y+         GK+ E
Sbjct: 178 EDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVE 237

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE-ESLSYCEQMMSRKLLPSCSAFNEMI 240
           A+ +  +M    +   D T++L++ G +K      E+     +MM +K+ P   A++ +I
Sbjct: 238 ASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILI 297

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+     +A  M      +G SP  +TY+ L+ G     ++Q+ ++L Y M  +   
Sbjct: 298 NGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRL 357

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P   +Y  +I   C  G   EA   F+ M    +V     Y  ++   ++    + A  L
Sbjct: 358 PDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWML 417

Query: 361 CEEMVS 366
            + M S
Sbjct: 418 FKRMQS 423



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 144/331 (43%), Gaps = 18/331 (5%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL-Q 75
           RG S +++++NTL+  +  + +      +   ML+  R P+  +   +I   C  G   +
Sbjct: 319 RGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNE 378

Query: 76  TYVDMLDRIHGKRCSPMVIVNTS----LILRIIQEERIEEGMVLLKRMLR----KNMIHD 127
            Y    D I        +++NT     +I+  I++E      +L KRM      K    +
Sbjct: 379 AYCLFQDMIKDG-----IVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPN 433

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
              Y +++ +  K   +E A  +   M  +GF  +  ++   +      G++++A  L +
Sbjct: 434 MFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYK 493

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM     +    + N+L++G  +   ++E+  + +QM    ++P    +++++  LC  G
Sbjct: 494 EMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQG 553

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
            A QA  ++   +  G  P       L+G    +G+ Q   + Y  +    +  TL  + 
Sbjct: 554 KADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHN 613

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           +L++S C   KL+    Y  +++    VP V
Sbjct: 614 TLVTSCCLARKLD----YLDMIEQREGVPDV 640



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/329 (19%), Positives = 135/329 (41%), Gaps = 39/329 (11%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+      LI+ LCK  +     +M   + G+  SP V+   +L+  ++   ++++ M L
Sbjct: 288 PDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMEL 347

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF---------------- 159
              ML +  + DT +Y+L++       +   A  ++++M+K G                 
Sbjct: 348 TYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIK 407

Query: 160 -----------------------SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                                  + N F Y   I + C+  ++EEA  L+  M + G  P
Sbjct: 408 DEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVP 467

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
             + + +L+   A+A R++++    ++M          + N ++  +   G+  +A   L
Sbjct: 468 SLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFL 527

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               D G  P++ TY  L+ G   +G+  +  KL  E+      P       L+ +LC  
Sbjct: 528 KQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQ 587

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           G  + A +++  + S  +   + ++ +LV
Sbjct: 588 GDFQGAYEFYCWLPSVGVEVTLGMHNTLV 616


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 166/363 (45%), Gaps = 15/363 (4%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-------PNEATIRTLISALC 69
           RG +  ++++N L+    K        R Y+  +E I         PN  T   L+  +C
Sbjct: 36  RGCAPDVVTYNILLEATCKG-------RGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 88

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G +   +++L  +    C P  +   +++  +   ER  +   L+  MLR+N   +  
Sbjct: 89  GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEA 148

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            +++++Y+  +   L+ A+ + E+M K G +AN   Y   I   CE   ++ A  L+ +M
Sbjct: 149 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 208

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           ++ G KP   T+N L++G   A R  ++    + M     LP    FN +I  LC+ G  
Sbjct: 209 KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 268

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +     DKG +PN ITYS +I G AK  ++ + L+L+ EM +K  +P    Y  L
Sbjct: 269 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLL 327

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
              L     +EEA +  + ++   + P   +Y +++      G    A+ +   MVS G 
Sbjct: 328 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 387

Query: 370 KPS 372
            P 
Sbjct: 388 MPD 390



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 139/318 (43%), Gaps = 35/318 (11%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LI  LC+ GQ++  + +LD +  + C+P                        
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAP------------------------ 40

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
                      D + Y++++ A  K R    A+ + + M   G + N+  Y   +   C 
Sbjct: 41  -----------DVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCG 89

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G +++A  L++ + + G KP    +N +++G   A+R  ++     +M+     P+ + 
Sbjct: 90  EGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEAT 149

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN +I  LC  G  +QA  +L      G + N +TY+ +I G  ++  +   + L  +M+
Sbjct: 150 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK 209

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
                P +  Y +L+  LC   +  +A++    M  +  +P    + +L+G   +KG   
Sbjct: 210 SYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMV 269

Query: 356 KALHLCEEMVSEGLKPST 373
            A+ + ++M  +G  P++
Sbjct: 270 DAIEVFKQMPDKGCTPNS 287



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 9/320 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R L   G   S +++NT++  +  ++R      +   ML     PNEAT   +I 
Sbjct: 96  ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 155

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LC+ G LQ  + +L+++    C+  ++   ++I  + ++  ++  M LL +M       
Sbjct: 156 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 215

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++           A  + + M + G   ++  + T IG  C+ G + +A  + 
Sbjct: 216 DIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 275

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G  P   T++ +I G AKA +++++L    +M  +   P     +++ + L EC
Sbjct: 276 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP-----DKIYQLLAEC 330

Query: 247 GNA----KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            N     ++A   +    D G SP+ + Y+ ++ G  + G+ +  + +   M      P 
Sbjct: 331 LNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPD 390

Query: 303 LPAYTSLISSLCQCGKLEEA 322
              Y  LI  L   G L EA
Sbjct: 391 DLTYVILIEGLAYEGYLNEA 410



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 82/175 (46%)

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   T+N LI    +  ++ ++LS  + M+ R   P    +N ++   C+    +QA 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++ L   +G +PN +TY+ L+ G   EG++ + L+L   +      P+   Y +++  L
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           C   +  +AD+    M   +  P    +  ++     KG   +A+ L E+M   G
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 180/401 (44%), Gaps = 35/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F V   + +RG+    ++ NTLI  +    +       +  +L      N+ +  TLI+
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +CK G  +  + +L +I G+   P V + +++I  + + + + E   L   M  K +  
Sbjct: 173 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS ++Y       L+ A+ +  EM+ +  + N + Y   + A C+ GK++EA  ++
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292

Query: 187 QEMENA-----------------------------------GLKPYDETFNLLIEGCAKA 211
             M  A                                   G+ P   T+ +LI G  K 
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           K ++E+L+  ++M  + ++P    ++ +I  LC+ G       ++    D+G   + ITY
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITY 412

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           S LI G  K G +   + L+ +M+ + I P +  +T L+  LC+ G+L++A + F+ + +
Sbjct: 413 SSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLT 472

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 V  Y  ++  H ++G   +AL +  +M   G  P+
Sbjct: 473 KGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 152/313 (48%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T+  LI+  C  GQ+     +L +I  +   P  +   +LI  +  + ++++ +  
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             ++L +    + ++Y+ ++    K+ +   A+ +  ++  R    N  +Y+T I A C+
Sbjct: 152 HDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK 211

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           Y  + EA  L  EM   G+     T++ LI G     +++E++    +M+ + + P+   
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT 271

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC+ G  K+A  +L + L     P+ ITYS L+ GY    E+++   ++  M 
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              ++P +  YT LI+  C+   ++EA   FK M   ++VPG+  Y SL+    + G   
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391

Query: 356 KALHLCEEMVSEG 368
               L +EM   G
Sbjct: 392 YVWDLIDEMRDRG 404



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 166/363 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++ R    ++  ++T+I  + K       + ++  M       +  T  TLI 
Sbjct: 183 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+L+  + +L+ +  K  +P V     L+  + +E +++E   +L  ML+  +  
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS ++     +  ++ A  V+  M   G + +   YT  I  +C+   ++EA  L 
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   T++ LI+G  K+ RI       ++M  R        ++ +I  LC+ 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +     D+   PN  T++ L+ G  K G +++  +++ ++  K     +  Y
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I+  C+ G LEEA      M+ +  +P    +E+++    +K    KA  L  +M++
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIA 542

Query: 367 EGL 369
            GL
Sbjct: 543 RGL 545



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 134/296 (45%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V   +R+   R +P +I    ++    + +     + L  R+  K +  D I  ++++  
Sbjct: 44  VSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINC 103

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              M  +     V  ++LKRG+  ++    T I   C  G++++A     ++   G +  
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++  LI G  K      ++    ++  R   P+   ++ +I  LC+     +A G+ +
Sbjct: 164 QVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 223

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG S + +TYS LI G+  EG+++E + L  EM  K+I+P +  Y  L+ +LC+ G
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K++EA     +M    + P V  Y +L+  +       KA H+   M   G+ P  
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 120/267 (44%)

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           + +++ +    RML        I ++ I+ +  KM++  +A+ +   +  +G   +    
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              I  +C  G+I     ++ ++   G  P   T N LI+G     +++++L + +++++
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           +    +  ++  +I  +C+ G+ + A  +L     +   PN   YS +I    K   + E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L+ EM  K IS  +  Y++LI   C  GKL+EA      M   ++ P V  Y  LV 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
              ++G   +A  +   M+   +KP  
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDV 304



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 106/233 (45%)

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           ++N++ A+  +  ML    +     +   + ++ +      A  L   +E  G++P   T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N+LI       +I    S   +++ R   P     N +I+ LC  G  K+A       L
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +GF  N+++Y+ LI G  K G+ +  +KL  +++ +   P +  Y+++I +LC+   + 
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA   F  M    +   V  Y +L+     +G   +A+ L  EMV + + P+ 
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNV 269


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 161/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR                +I  + K     LVW  Y+  LE   YP       
Sbjct: 97  FRVPFDTCR---------------KVIEHLMKLKYFKLVWGFYEESLE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CKGG++     + D I      P V+                            
Sbjct: 141 ILMHNFCKGGEIXLAQSVFDSITKWGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +++ ++   +K+ +L+    +   M   G   + + Y+  I   C+  K+++A
Sbjct: 173 -------SFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM + GL P   TF  LI+G  K  R++ ++    QM+S+ LLP    +N +I  
Sbjct: 226 NALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA  ++     KG  P++ITY+ LI G  KEG+++   +    M  ++I   
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P +  Y  ++    +KG+      L +
Sbjct: 346 DVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 363 EMVSEGLKPS 372
           EM  +G  P+
Sbjct: 406 EMQRDGYLPN 415



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 120/265 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G   S++SFNTL++   K    D  +R+   M  +   P+  T   LI
Sbjct: 154 LAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLI 213

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK  ++     + D +      P  +  T+LI    +  R++  M + ++ML ++++
Sbjct: 214 NGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLL 273

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E A   
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEY 333

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            + M    ++  D  +  LI    +  R  ++     +M+S  L P    +  +I   C+
Sbjct: 334 RKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCK 393

Query: 246 CGNAKQANGMLTLALDKGFSPNEIT 270
            G+    + +L      G+ PN +T
Sbjct: 394 KGDVWTGSKLLKEMQRDGYLPNVVT 418



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   +IE   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVIEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++   C+ G    A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A+  F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ +  +M+S+ L P 
Sbjct: 257 VDLAMEIYRQMLSQSLLPD 275


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 167/379 (44%), Gaps = 52/379 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A++V R +  +GF     +++ +I  +  + + +  ++++Q M  N   P+     T
Sbjct: 203 FEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTT 262

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G ++   +  D +    C+P V+  T+LI   ++  ++ +   + + ML K 
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS-----------------ANSFVY 166
              + + Y+ ++    K   +E A  +Y+ M K                      N F Y
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA--------------- 211
              +   C+  +++EA  L++ M   G +P    ++ LI+GC KA               
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442

Query: 212 --------------------KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
                               KR++ +L    +M+     P+   + EMI  LC+ G   +
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 502

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ++ +  +KG +PN +TY+ +I G+ K G +++ L+L  +M  K  +P    Y  LI+
Sbjct: 503 AYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562

Query: 312 SLCQCGKLEEADKYFKIMK 330
             C  G L+EA K  + MK
Sbjct: 563 HCCSTGLLDEAHKLLEEMK 581



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 171/428 (39%), Gaps = 57/428 (13%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LFE A D    +       +++++  L+      ++     RI   M+    YP+     
Sbjct: 57  LFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFN 116

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER-------------- 108
           +L+ A C+ G       +L ++    C P  +V   LI  I   E               
Sbjct: 117 SLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYG 176

Query: 109 --IEEGMVL------------------------LKRMLRKNMIHDTIAYSLIVYAKVKMR 142
             +E G+VL                        ++ M+ K  I DT  YS ++       
Sbjct: 177 EMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNAS 236

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            +E A  +++EM + G + + +VYTT I ++C+ G IE+A     EME  G  P   T+ 
Sbjct: 237 KVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYT 296

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA--- 259
            LI    K++++ ++    E M+S+   P+   +  +I  LC+ G  ++A+ +  +    
Sbjct: 297 ALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKE 356

Query: 260 ------LDKGF--------SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                 +D  F         PN  TY  L+ G  K  +++E   L   M  +   P    
Sbjct: 357 NVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVV 416

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI   C+ GKL+EA + F  M      P V  Y SL+    +      AL +  +M+
Sbjct: 417 YDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKML 476

Query: 366 SEGLKPST 373
                P+ 
Sbjct: 477 ENSCAPNV 484



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 159/370 (42%), Gaps = 46/370 (12%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQT 76
           G+ +   +     H + KS +    WR    +LE   + P+      +IS LC+    + 
Sbjct: 5   GYRMDEFTLGCFAHSLCKSGK----WREALSLLEKEEFVPDTVLYTKMISGLCEASLFEE 60

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEER-----------IEEGMV----------- 114
            +D L R+    C P V+    L+   + +E+           I EG             
Sbjct: 61  AMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVH 120

Query: 115 -------------LLKRMLRKNMIHDTIAYSLIVYAKVKMRN-----LESALVVYEEMLK 156
                        LLK+M++       + Y++++             L+ A   Y EML+
Sbjct: 121 AYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLE 180

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G   N    + F    C  GK E+A  +++EM + G  P   T++ +I     A ++E+
Sbjct: 181 AGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEK 240

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +    ++M    + P    +  +I   C+ G  +QA          G +PN +TY+ LI 
Sbjct: 241 AFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIH 300

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL-V 335
            Y K  ++ +  ++Y  M  K  +P +  YT+LI  LC+ GK+E+A + +KIMK  ++ +
Sbjct: 301 AYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEI 360

Query: 336 PGVDIYESLV 345
           P VD++  +V
Sbjct: 361 PDVDMHFRVV 370



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 135/318 (42%), Gaps = 35/318 (11%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           +E T+     +LCK G+ +  + +L++   +   P  ++ T +I  + +    EE M  L
Sbjct: 9   DEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFL 65

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
            RM   + + + + Y +++   +    L     +   M+  G   +  ++ + + AYC  
Sbjct: 66  TRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRS 125

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           G    A  L+++M   G +P    +N+LI G C+  +  ++ L   E+           A
Sbjct: 126 GDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEK-----------A 174

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           + EM                    L+ G   N++  S+        G+ ++   +  EM 
Sbjct: 175 YGEM--------------------LEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMM 214

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K   P    Y+ +I  LC   K+E+A + F+ MK + + P V +Y +L+    + G   
Sbjct: 215 SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIE 274

Query: 356 KALHLCEEMVSEGLKPST 373
           +A +  +EM  +G  P+ 
Sbjct: 275 QARNWFDEMERDGCAPNV 292



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 138/325 (42%), Gaps = 18/325 (5%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + +   G   + + ++ LI    K+ + D    ++  MLE    PN  T  +LI 
Sbjct: 398 ARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLID 457

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  +L   + +L ++    C+P V++ T +I  + +  + +E   L+  M  K    
Sbjct: 458 RLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K   +E  L + ++M  +G + N   Y   I   C  G ++EA+ L+
Sbjct: 518 NVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLL 577

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM+      +   +  +IEG  +       LS+  ++     +P    +  +I    + 
Sbjct: 578 EEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSF--EISENDSVPVAPVYRVLIDNFIKA 635

Query: 247 GNAKQANGMLTLALD-----KGFSP----NEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
           G        L +AL+       FSP    N+  +  LI   +   +  +  +LY +M  +
Sbjct: 636 GR-------LEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISR 688

Query: 298 SISPTLPAYTSLISSLCQCGKLEEA 322
              P L     LI  L +  + EEA
Sbjct: 689 GSIPELSILVHLIKGLLRVNRWEEA 713



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 29/246 (11%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M   G+  + F    F  + C+ GK  EA  L+++ E     P    +  +I G  +A  
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEE---FVPDTVLYTKMISGLCEASL 57

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ---ANGMLTLALDKGFSPNEIT 270
            EE++ +  +M +   LP+   +  +   LC C N ++      +L++ + +G  P+   
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRIL---LCGCLNKEKLGRCKRILSMMITEGCYPSPRI 114

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC---QCGK--LEEADK- 324
           ++ L+  Y + G+     KL  +M      P    Y  LI  +C   + GK  L+ A+K 
Sbjct: 115 FNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKA 174

Query: 325 YFKIMKSHSLVPGVDIYE---SLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS------- 374
           Y +++++  ++  V+I      L GI    G   KA ++  EM+S+G  P TS       
Sbjct: 175 YGEMLEAGVVLNKVNISNFSRCLCGI----GKFEKAYNVIREMMSKGFIPDTSTYSKVIG 230

Query: 375 YLCSAS 380
           YLC+AS
Sbjct: 231 YLCNAS 236



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 8/216 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   +E++G + +++++  +I    KS R +    + Q M      PN  T R LI+
Sbjct: 503 AYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G L     +L+ +  +   P  +     ++     E I   + L   +   + + 
Sbjct: 563 HCCSTGLLDEAHKLLEEMK-QTYWPRHVAGYRKVIEGFNREFIA-SLYLSFEISENDSVP 620

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS----ANSFVYTTFIGAYCEYGKIEEA 182
               Y +++   +K   LE AL + EE+    FS    AN  ++ T I       K ++A
Sbjct: 621 VAPVYRVLIDNFIKAGRLEIALELNEEL--SSFSPFSAANQNIHITLIENLSLAHKADKA 678

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
             L  +M + G  P       LI+G  +  R EE+L
Sbjct: 679 FELYADMISRGSIPELSILVHLIKGLLRVNRWEEAL 714


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 189/433 (43%), Gaps = 70/433 (16%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + + G+  + I+FNTLI+ +  + +       + H++    + ++ + RTLI+
Sbjct: 113 AFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLIN 172

Query: 67  ALCKGGQLQTYVDMLDRIHG-----------------------------------KRCSP 91
            LCK G+ +  + ML +I G                                   KR SP
Sbjct: 173 GLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISP 232

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
            V+   SLIL      +++E   L   M+ KN+  D   +S++V A  K  N+  A  + 
Sbjct: 233 DVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNML 292

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
             M+K+G   +   Y++ +  YC   ++ +A  +   M   G+ P+  ++N++I G  K 
Sbjct: 293 AVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKI 352

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA---------NG----MLT- 257
           K ++E+LS  ++M  + + P    +N +I  LC+ G    A         NG    +LT 
Sbjct: 353 KMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTY 412

Query: 258 ----------------LAL-----DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
                           +AL     D+G  P+  TY+ LI G  K G ++    ++ ++  
Sbjct: 413 NSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI 472

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K  S     Y  +I+ LC+ G   EA+     M+++ ++P    YE+++     K    K
Sbjct: 473 KGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEK 532

Query: 357 ALHLCEEMVSEGL 369
           A  L  EM+  GL
Sbjct: 533 AEKLLREMIIRGL 545



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 183/388 (47%), Gaps = 12/388 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +  A  +   LE +G + ++++FN L++           + I+  +L+   +P   T  T
Sbjct: 75  YTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNT 134

Query: 64  LISALCKGGQLQTYVDMLDRI-----HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           LI+ +C  G+L+  +   D +     H  + S   ++N    L  I E R    + +LK+
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLING---LCKIGETR--AALQMLKK 189

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           +  K +  D + Y++I+ +  K + +  A  +Y EM+ +  S +   + + I  +C  G+
Sbjct: 190 IEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQ 249

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++EA  L  EM    + P   TF++L++   K   I  + +    MM + ++P    ++ 
Sbjct: 250 LKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSS 309

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++   C      +A  + +     G +P+  +Y+ +I G  K   + E L L+ EM  K 
Sbjct: 310 LMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG 369

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I+P    Y SLI  LC+ G++  A +    M ++ +   +  Y SL+ +  +  +  KA+
Sbjct: 370 IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAI 429

Query: 359 HLCEEMVSEGLKPS--TSYLCSASTCRG 384
            L +++  +G++PS  T  +     C+G
Sbjct: 430 ALVKKIKDQGIQPSMYTYNILIDGLCKG 457



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 2/258 (0%)

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRN--LESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           RMLR       + ++ I+ + VK  N    +A+ +  ++  +G +     +   +  YC 
Sbjct: 47  RMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCH 106

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++  A  +  ++   G  P   TFN LI G     +++E+L + + +++        +
Sbjct: 107 LGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVS 166

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I  LC+ G  + A  ML     K  + + + Y+ +I    K+  + +  +LY EM 
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI 226

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K ISP +  + SLI   C  G+L+EA   F  M   ++ P V  +  LV    + GN  
Sbjct: 227 TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNIT 286

Query: 356 KALHLCEEMVSEGLKPST 373
           +A ++   M+ +G+ P  
Sbjct: 287 RAKNMLAVMMKQGVIPDV 304



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 101/206 (49%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N +I+ + K    D    +++ M      P+  T  +LI  LCK G++     ++D +
Sbjct: 341 SYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM 400

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
           H       ++   SLI  + +   I++ + L+K++  + +      Y++++    K   L
Sbjct: 401 HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRL 460

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           ++A  V++++L +G+S N++ Y   I   C+ G   EA  L+ +MEN G+ P   T+  +
Sbjct: 461 KNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETI 520

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLL 230
           I    +    E++     +M+ R LL
Sbjct: 521 IRALFRKDENEKAEKLLREMIIRGLL 546


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 157/326 (48%), Gaps = 1/326 (0%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N      +++  C+ GQ      MLD + G+  SP ++  T L+     E+ +EE   ++
Sbjct: 277 NLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVV 336

Query: 117 KRMLR-KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           + + + K ++ D   +  ++    +M  +E A  +  EM+      N FVY   I  YC+
Sbjct: 337 QEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCK 396

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++ EA+ ++ EM   G++P   ++N L++G  K   + ++      M+      +   
Sbjct: 397 LGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLT 456

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +++  C  G+   A  +  L L KG +PNEI+ S L+ G+ K G+ ++ L L+ E  
Sbjct: 457 YNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETL 516

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + ++     + ++I+ LC+  ++ EA++    MK     P +  Y +L   + + G+  
Sbjct: 517 ARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMD 576

Query: 356 KALHLCEEMVSEGLKPSTSYLCSAST 381
           +A  +  E+ + G  P+  +  S  T
Sbjct: 577 RASRILNELENLGFAPTIEFFNSLIT 602



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 163/336 (48%), Gaps = 17/336 (5%)

Query: 14  LEQRGFSLSLISFNTLI--HVVTKSDR--NDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           LE  GF+ ++  FN+LI  H + K     ND+++ +    L     PN      LI+  C
Sbjct: 585 LENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLS----PNTVAYGALIAGWC 640

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G L T  ++   +  K   P + + +SL+    ++ + +E  ++L+ ++  +MI D  
Sbjct: 641 KEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           A  L +    K+ N        + +      +   ++   I   C+ G+IE+A  L+ ++
Sbjct: 701 APRLEIG---KVANF------IDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADL 751

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           ++ G    + T++ LI GC+ +  ++ +    + M+S  L P+   +N +I  LC+ G  
Sbjct: 752 KDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGEL 811

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +      KG SPN ITY+ LI  + K+G I E  KL   M  + I PT+  Y+ L
Sbjct: 812 SRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSIL 871

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           I+ LC  G +EEA K    M  +++ P    Y +L+
Sbjct: 872 INGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 167/368 (45%), Gaps = 9/368 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ +    RG + +  +FNT+I+ + K +R      +   M +    P+  T RTL
Sbjct: 506 EKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTL 565

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            S  CK G +     +L+ +     +P +    SLI      ++  +   +L  M  + +
Sbjct: 566 FSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGL 625

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +T+AY  ++    K  +L +A  +Y EM+++G   N F+ ++ +  +   GK +EAN 
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++Q +    + P         +  A    I +  ++ + +       +   +N +I  LC
Sbjct: 686 VLQNLVGTDMIP---------DISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLC 736

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  + A  +L    DKGF  +  TYS LI G +  G +     L   M    ++P + 
Sbjct: 737 KLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIV 796

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y SLI  LC+ G+L  A   FK + +  + P    Y +L+  H + G   +A  L + M
Sbjct: 797 TYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM 856

Query: 365 VSEGLKPS 372
           + EG+ P+
Sbjct: 857 IEEGIHPT 864



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 176/370 (47%), Gaps = 8/370 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGG 72
           L  RGFS +++++  L+         +    + Q + +N +   +EA    +I+  C+ G
Sbjct: 304 LPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMG 363

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +++    +L+ +   R    + V   +I    +  R+ E   +L  M    +  DT +Y+
Sbjct: 364 RMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYN 423

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            +V    K   +  A   Y  ML+ GF+A +  Y   +  +C  G I++A  L   M   
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G+ P + + + L++G  K+ + E++L+  ++ ++R L  + + FN +I  LC+     +A
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++         P+ ITY  L  GY K G++    ++  E+E    +PT+  + SLI+ 
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603

Query: 313 ---LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
                Q GK+   D  F+ M +  L P    Y +L+    ++G+   A +L  EM+ +GL
Sbjct: 604 HFIAKQHGKVN--DILFE-MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGL 660

Query: 370 KPSTSYLCSA 379
            P+  ++CS+
Sbjct: 661 VPNL-FICSS 669



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 1/315 (0%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           A+   L+ AL   GQL   + + D +    C   +    S++ R+ Q   +   + + ++
Sbjct: 174 ASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQ 233

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M R   + D    +++  A  K++ +  AL   EEM K G   N   Y   +  YCE G+
Sbjct: 234 MQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQ 293

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFN 237
             +A  ++  +   G  P   T+ LL++G    K +EE+    +++  +++L+   + F 
Sbjct: 294 TNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFG 353

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I   C+ G  + A  +L   +D     N   Y+ +I GY K G + E   + +EM   
Sbjct: 354 AVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGV 413

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P   +Y SL+   C+ G + +A + +  M  +        Y +L+      G+   A
Sbjct: 414 GVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDA 473

Query: 358 LHLCEEMVSEGLKPS 372
           L L   M+ +G+ P+
Sbjct: 474 LRLWFLMLKKGIAPN 488



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 159/352 (45%), Gaps = 6/352 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F  +I+   +  R +   R+   M+++    N      +I+  CK G++    ++L  + 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
           G    P      SL+    ++  + +       MLR      T+ Y+ ++     + +++
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            AL ++  MLK+G + N    +T +  + + GK E+A  L +E    GL     TFN +I
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K +R+ E+    ++M   +  P    +  +    C+ G+  +A+ +L    + GF+
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFA 591

Query: 266 PNEITYSHLIGGY---AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           P    ++ LI G+    + G++ ++L   +EM  + +SP   AY +LI+  C+ G L  A
Sbjct: 592 PTIEFFNSLITGHFIAKQHGKVNDIL---FEMSNRGLSPNTVAYGALIAGWCKEGDLHTA 648

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              +  M    LVP + I  SLV     KG   +A  + + +V   + P  S
Sbjct: 649 YNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDIS 700



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 152/374 (40%), Gaps = 26/374 (6%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N+L+    K    +  +  Y  ML N       T   L+   C  G +   + +   +
Sbjct: 421 SYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLM 480

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K  +P  I  ++L+    +  + E+ + L K  L + +  +T  ++ ++    K+  +
Sbjct: 481 LKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERM 540

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  + ++M +     +   Y T    YC+ G ++ A+ ++ E+EN G  P  E FN L
Sbjct: 541 PEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSL 600

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G   AK+  +      +M +R L P+  A+  +I   C+ G+   A  +    ++KG 
Sbjct: 601 ITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGL 660

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA------------------- 305
            PN    S L+  + ++G+  E   +   +    + P + A                   
Sbjct: 661 VPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGN 720

Query: 306 -------YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
                  +  +I  LC+ G++E+A      +K    V     Y SL+      G    A 
Sbjct: 721 HHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAF 780

Query: 359 HLCEEMVSEGLKPS 372
            L + M+S GL P+
Sbjct: 781 DLRDTMLSVGLTPN 794



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 115/245 (46%), Gaps = 1/245 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           ++ L++ A      L+ AL V++EM   G   +     + +    + G +     + ++M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           + AG  P   T  ++ +   K K +  +L + E+M    +  +  A++ ++   CE G  
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTS 308
             A  ML     +GFSPN +TY+ L+ GY  E  ++E   +  E+ + K +      + +
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+  CQ G++E+A +    M    L   + +Y  ++  + + G   +A ++  EM   G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 369 LKPST 373
           ++P T
Sbjct: 415 VRPDT 419



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 35/210 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+ +GF     ++++LIH  + S   D+ + +   ML     PN  T  +LI  LCK G+
Sbjct: 751 LKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGE 810

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   V +  ++  K  SP  I   +LI +  ++  I E   L +RM+ +  IH T+    
Sbjct: 811 LSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG-IHPTV---- 865

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
                                         F Y+  I   C  G +EEA  L+ +M    
Sbjct: 866 ------------------------------FTYSILINGLCTQGYMEEAIKLLDQMIENN 895

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + P   T+  LI+G  + + ++  +   +Q
Sbjct: 896 VDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 72/149 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VAFD+   +   G + +++++N+LI+ + KS        +++ +      PN  T  TL
Sbjct: 777 DVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTL 836

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK G +     +  R+  +   P V   + LI  +  +  +EE + LL +M+  N+
Sbjct: 837 IDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNV 896

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEE 153
             + + Y  ++   V+  +++  ++  ++
Sbjct: 897 DPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 161/342 (47%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S N L+H ++K  R DL  + ++ M       +  T   +I  LCK G L+    +  ++
Sbjct: 23  SCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM 82

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                +P ++   SLI    +   ++E + + ++M   +   D I Y+ ++    K   +
Sbjct: 83  KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERM 142

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A     EM   G   N   Y+TFI A+C+ G ++EA     +M    L P + T+  L
Sbjct: 143 PKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSL 202

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   KA  + E+L   E+++   +  +   +  ++  LCE G  K+A  +    L+ G 
Sbjct: 203 IDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 262

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN+ TY+ L+ G+ K  E++    +  EM+ K I P L  Y +++  LC   +LEEA  
Sbjct: 263 APNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKL 322

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
               +K   +     IY +L+  + + G   +AL L EEM+ 
Sbjct: 323 LIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 364



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 170/367 (46%), Gaps = 12/367 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E+A  +   +++ GF+  ++++N+LI    K    D    I++ M +    P+  T   
Sbjct: 72  LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 131

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK  ++    + L  +      P V+  ++ I    +E  ++E +     M R  
Sbjct: 132 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 191

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +   Y+ ++ A  K  NL  AL + EE+L+ G   N   YT  +   CE G+++EA 
Sbjct: 192 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 251

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + + M NAG+ P  ET+  L+ G  KAK +E +    ++M  + + P    +  ++  L
Sbjct: 252 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 311

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     ++A  ++    + G + N + Y+ L+  Y K G+  E L L  EM         
Sbjct: 312 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM--------- 362

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
                L+  LC+    E A K F  M    ++P    Y +L+  +++ GN  +AL+L + 
Sbjct: 363 ---LDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 419

Query: 364 MVSEGLK 370
           M+  G++
Sbjct: 420 MIEIGME 426



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 168/363 (46%), Gaps = 12/363 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+    ++  G   ++++++T I    K        + +  M      PNE T  +LI 
Sbjct: 145 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 204

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G L   + +++ I        V+  T+L+  + +E R++E   + + ML   +  
Sbjct: 205 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 264

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ +V+  +K + +E A  + +EM ++    +  +Y T +   C   ++EEA  L+
Sbjct: 265 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 324

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            E++ +G+      +  L++   K+ +  E+L+  E+M+            +++  LC+ 
Sbjct: 325 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML------------DLVDGLCKN 372

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              + A  +    LDKG  P++I Y+ LI G  K G +QE L L   M    +   L AY
Sbjct: 373 NCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAY 432

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+LI  L   G++++A      M    ++P   +Y  L+  +   G   +AL L  EM  
Sbjct: 433 TALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAK 492

Query: 367 EGL 369
            G+
Sbjct: 493 RGM 495



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 133/276 (48%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
            +L+ R+ +  R +      K M    +      Y++++    K  +LE A  ++ +M +
Sbjct: 25  NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKE 84

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            GF+ +   Y + I  + + G ++E  C+ ++M++A   P   T+N LI    K +R+ +
Sbjct: 85  AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPK 144

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +  +  +M +  L P+   ++  I   C+ G  ++A            +PNE TY+ LI 
Sbjct: 145 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 204

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K G + E LKL  E+    I   +  YT+L+  LC+ G+++EA++ F+ M +  + P
Sbjct: 205 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 264

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + Y +LV   ++      A  + +EM  + +KP 
Sbjct: 265 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 35/227 (15%)

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +EEA+    +M    + P   + N L+   +K  R + S  + + M +  +  S   +N 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY------- 291
           MI  LC+ G+ + A  + T   + GF+P+ +TY+ LI G+ K G + E + ++       
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 292 ----------------------------YEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
                                       +EM+   + P +  Y++ I + C+ G L+EA 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           K+F  M+  +L P    Y SL+  + + GN A+AL L EE++  G+K
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 228



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 23/251 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V R +   G + +  ++  L+H   K+   +    I + M E    P+     T++ 
Sbjct: 250 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 309

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR----- 121
            LC   +L+    ++  I     +   ++ T+L+    +  +  E + LL+ ML      
Sbjct: 310 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGL 369

Query: 122 ------------------KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
                             K M+ D IAY+ ++   +K  NL+ AL + + M++ G   + 
Sbjct: 370 CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 429

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             YT  I      G++++A  L+ EM   G+ P +  +  LI+      +++E+L    +
Sbjct: 430 HAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNE 489

Query: 224 MMSRKLLPSCS 234
           M  R ++   S
Sbjct: 490 MAKRGMITGLS 500


>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 161/340 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  ++I+ N +++ + K   +   W +Y+ M     + N  T   L   LC+ G +   
Sbjct: 220 GFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKI 279

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
              L+++  +   P V+   +LI   ++  R+E+   L K M R+ ++ D ++Y+ ++  
Sbjct: 280 NGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRG 339

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++  +  A  ++  M+ RG   +  +Y T IGAYC+ G ++EA  L+ EM   G+ P 
Sbjct: 340 LCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPD 399

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T  +L+EG  +  R+  +L+   ++    +  +   +  +I  LC       A  +L 
Sbjct: 400 SFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLE 459

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L+  F P+   Y+ LI  + +   + E L L  EM  ++  PT   Y SLI  +C+  
Sbjct: 460 RILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEIN 519

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           +  + +     M    ++P  +I  +LV  + ++GN  KA
Sbjct: 520 RSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKA 559



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 35/331 (10%)

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           + C+   ++   LI   ++ + I E     K+M++   + + IA + I+    KM++   
Sbjct: 184 EHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQ 243

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
              +YEEM + G  +N++ +       C  G + + N  +++ME  G  P   T+N LI+
Sbjct: 244 CWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLID 303

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              +  R+E++    + M  R ++P   ++  ++R LC  G  ++A+ +    +D+G  P
Sbjct: 304 SYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDP 363

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP------------------------- 301
           + + Y+ LIG Y K+G +QE   L +EM    I P                         
Sbjct: 364 DVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLV 423

Query: 302 ----------TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
                         Y  LI SLC+  +   A    + +   S  P  DIY  L+      
Sbjct: 424 VEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRS 483

Query: 352 GNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
            N ++AL L  EM++   KP+T    S   C
Sbjct: 484 NNVSEALLLKLEMINRNYKPTTDTYKSLIHC 514



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 154/360 (42%), Gaps = 35/360 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ GF   ++++NTLI    +  R +  + +Y+ M      P+  +  +L+  LC+ G+
Sbjct: 286 MEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGR 345

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    +  R+  +   P V++  +LI    ++  ++E   LL  M+   +  D+    +
Sbjct: 346 VREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRI 405

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    +   L SAL +  E+ K G +    +Y   I + C   +   A  L++ +    
Sbjct: 406 LVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDS 465

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P  + +N LIE   ++  + E+L    +M++R   P+   +  +I  +CE   +    
Sbjct: 466 FQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGE 525

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           G++   ++    P+      L+ GY KEG   +                     SL+ S 
Sbjct: 526 GLMVEMVESEVIPDHEICRALVNGYCKEGNADKA-------------------ESLLVSF 566

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            Q          F+   S S       + SLV ++ + GN+ K + L + M+  G  P++
Sbjct: 567 AQ---------DFQFFDSES-------FNSLVKVYRDVGNETKLMELQDRMLKAGFLPNS 610



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 126/312 (40%), Gaps = 35/312 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF + + + +RG    L+S+ +L+  + +  R     +++  M++    P+     T
Sbjct: 311 LEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNT 370

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSP-----------------------MVI------ 94
           LI A CK G LQ    +L  + G    P                       +V+      
Sbjct: 371 LIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLG 430

Query: 95  ------VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
                 +   LI+ + +E+R      LL+R+L  +   D+  Y+ ++ +  +  N+  AL
Sbjct: 431 VTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEAL 490

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           ++  EM+ R +   +  Y + I   CE  +  +   LM EM  + + P  E    L+ G 
Sbjct: 491 LLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGY 550

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K    +++ S               +FN +++   + GN  +   +    L  GF PN 
Sbjct: 551 CKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAGFLPNS 610

Query: 269 ITYSHLIGGYAK 280
           +T  ++I G  K
Sbjct: 611 LTCRYIIHGIWK 622


>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 161/340 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  ++I+ N +++ + K   +   W +Y+ M     + N  T   L   LC+ G +   
Sbjct: 216 GFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKI 275

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
              L+++  +   P V+   +LI   ++  R+E+   L K M R+ ++ D ++Y+ ++  
Sbjct: 276 NGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRG 335

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++  +  A  ++  M+ RG   +  +Y T IGAYC+ G ++EA  L+ EM   G+ P 
Sbjct: 336 LCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPD 395

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T  +L+EG  +  R+  +L+   ++    +  +   +  +I  LC       A  +L 
Sbjct: 396 SFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLE 455

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L+  F P+   Y+ LI  + +   + E L L  EM  ++  PT   Y SLI  +C+  
Sbjct: 456 RILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEIN 515

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           +  + +     M    ++P  +I  +LV  + ++GN  KA
Sbjct: 516 RSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKA 555



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 35/331 (10%)

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           + C+   ++   LI   ++ + I E     K+M++   + + IA + I+    KM++   
Sbjct: 180 EHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQ 239

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
              +YEEM + G  +N++ +       C  G + + N  +++ME  G  P   T+N LI+
Sbjct: 240 CWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLID 299

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              +  R+E++    + M  R ++P   ++  ++R LC  G  ++A+ +    +D+G  P
Sbjct: 300 SYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDP 359

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP------------------------- 301
           + + Y+ LIG Y K+G +QE   L +EM    I P                         
Sbjct: 360 DVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLV 419

Query: 302 ----------TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
                         Y  LI SLC+  +   A    + +   S  P  DIY  L+      
Sbjct: 420 VEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRS 479

Query: 352 GNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
            N ++AL L  EM++   KP+T    S   C
Sbjct: 480 NNVSEALLLKLEMINRNYKPTTDTYKSLIHC 510



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 154/360 (42%), Gaps = 35/360 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ GF   ++++NTLI    +  R +  + +Y+ M      P+  +  +L+  LC+ G+
Sbjct: 282 MEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGR 341

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    +  R+  +   P V++  +LI    ++  ++E   LL  M+   +  D+    +
Sbjct: 342 VREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRI 401

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    +   L SAL +  E+ K G +    +Y   I + C   +   A  L++ +    
Sbjct: 402 LVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDS 461

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P  + +N LIE   ++  + E+L    +M++R   P+   +  +I  +CE   +    
Sbjct: 462 FQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGE 521

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           G++   ++    P+      L+ GY KEG   +                     SL+ S 
Sbjct: 522 GLMVEMVESEVIPDHEICRALVNGYCKEGNADKA-------------------ESLLVSF 562

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                     K F+   S S       + SLV ++ + GN+ K + L + M+  G  P++
Sbjct: 563 A---------KDFQFFDSES-------FNSLVKVYRDVGNETKLMELQDRMLKAGFLPNS 606



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 130/299 (43%), Gaps = 16/299 (5%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF + + + +RG    L+S+ +L+  + +  R     +++  M++    P+     T
Sbjct: 307 LEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNT 366

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEG-------MVLL 116
           LI A CK G LQ    +L  + G    P      S   RI+ E    EG       +V+ 
Sbjct: 367 LIGAYCKDGMLQEARSLLHEMIGIGIHP-----DSFTCRILVEGYGREGRLISALNLVVE 421

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
            + L   + HD   Y +I   +        +L+  E +L+  F  +S +Y   I ++C  
Sbjct: 422 IQKLGVTVAHDIYKYLIISLCREDRPFAAKSLL--ERILEDSFQPDSDIYNKLIESFCRS 479

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
             + EA  L  EM N   KP  +T+  LI    +  R  +      +M+  +++P     
Sbjct: 480 NNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEIC 539

Query: 237 NEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             ++   C+ GNA +A  +L + A D  F  +E +++ L+  Y   G   ++++L   M
Sbjct: 540 RALVNGYCKEGNADKAESLLVSFAKDFQFFDSE-SFNSLVKVYRDVGNETKLMELQDRM 597


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 172/372 (46%), Gaps = 2/372 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A +V R +  R  +    +++TL+H + K +R D    +   M     +PN     
Sbjct: 185 LVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFN 244

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LISALCK G L     ++D +  K C P  +   +L+  +  + ++E+ + LL +M+  
Sbjct: 245 VLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSN 304

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + + + +  ++   V          V   +  RG   N +VY++ I   C+ GK  +A
Sbjct: 305 KCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQA 364

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM   G  P    ++ LI+G  +  +++E+  +  +M ++  LP+   ++ ++R 
Sbjct: 365 MELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRG 424

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             E G++ +A  +     +     NE+ YS LI G  K+G+  E L ++ +M  + I   
Sbjct: 425 YFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLD 484

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV--PGVDIYESLVGIHLEKGNKAKALHL 360
           + AY+S+I   C    +E+  K F  M     V  P V  Y  L+     + +  +A+ +
Sbjct: 485 VVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDI 544

Query: 361 CEEMVSEGLKPS 372
              M+ +G  P 
Sbjct: 545 LNIMLDQGCDPD 556



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 166/350 (47%), Gaps = 5/350 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLE----NIRYPNEATIRTLISALCKGGQLQTYVDM 80
           SFN++++V+ +    +     Y H++     NI +PN  T   +I A+C+ G +   +++
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNI-HPNALTFNLVIKAMCRLGLVDKAIEV 192

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
              I  + C+P     ++L+  + +EERI+E + LL  M  +    + +A+++++ A  K
Sbjct: 193 FREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCK 252

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             +L  A  + + M  +G   N   Y   +   C  GK+E+A  L+ +M +    P D T
Sbjct: 253 KGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVT 312

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           F  LI G     R  +       + +R    +   ++ +I  LC+ G   QA  +    +
Sbjct: 313 FGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMV 372

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG  PN I YS LI G  +EG++ E      EM+ K   P    Y+SL+    + G   
Sbjct: 373 GKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSH 432

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +A   +K M +++ +     Y  L+    + G   +AL + ++M+S G+K
Sbjct: 433 KAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIK 482



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 167/363 (46%), Gaps = 12/363 (3%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPN----EATIRTLISALCKGGQL 74
           + L  +SF +LI    +S  + L +R  + +L  ++       E     +  A  K    
Sbjct: 57  YKLGDLSFYSLI----ESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLP 112

Query: 75  QTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---NMIHDTIA 130
           +  VD+  R+ G+ +C   V    S++  I+QE      +     ++     N+  + + 
Sbjct: 113 EKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALT 172

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++L++ A  ++  ++ A+ V+ E+  R  + +++ Y+T +   C+  +I+EA  L+ EM+
Sbjct: 173 FNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQ 232

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G  P    FN+LI    K   +  +    + M  +  +P+   +N ++  LC  G  +
Sbjct: 233 VEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLE 292

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L   +     PN++T+  LI G+  +G   +  ++   +E +        Y+SLI
Sbjct: 293 KAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLI 352

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S LC+ GK  +A + +K M      P   +Y +L+     +G   +A     EM ++G  
Sbjct: 353 SGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYL 412

Query: 371 PST 373
           P++
Sbjct: 413 PNS 415



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/297 (20%), Positives = 116/297 (39%), Gaps = 58/297 (19%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE RG   +   +++LI  + K  + +    +++ M+     PN      LI  LC+ G+
Sbjct: 336 LEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGK 395

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L      L  +  K   P     +SL+    +     + +++ K M   N IH+ + YS+
Sbjct: 396 LDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSI 455

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K      AL+V+++ML RG   +   Y++ I  +C    +E+   L  +M   G
Sbjct: 456 LINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQG 515

Query: 194 --LKPYDETFNLLI---------------------EGC---------------------- 208
             ++P   T+N+L+                     +GC                      
Sbjct: 516 PVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQ 575

Query: 209 -------------AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
                         K +R   +    E MM + LLP  S +  +++++C+  N ++A
Sbjct: 576 DGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 143/280 (51%), Gaps = 3/280 (1%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L++ ++++ R  +   L K M+R+ +  +   +++++ A  K   +  A  V E+M   G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 159 FSANSFVYTTFIGAYCEYG---KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           +S N   Y T I  YC+ G   K+ +A+ +++EM    + P   TFN+LI+G  K   + 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            SL   ++M+ + ++P+   +N +I  LC  G   +A GM    +  G  PN ITY  LI
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G+ K G ++E L ++  ++ +   PT   Y  LI + C+ GK+++     + M+   +V
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           P V  Y  L+      GN   A  L +++ ++GL    ++
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLPDLVTF 473



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 178/384 (46%), Gaps = 30/384 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRT 63
           A DV   ++  G+S +++S+NTLI    K   N  +++   + + M+EN   PN  T   
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNI 301

Query: 64  LISALCKG----GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           LI    K     G L+ + +MLD    +   P VI   SLI  +    +I E + +  +M
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLD----QDVIPNVITYNSLINGLCNGGKINEAIGMRDKM 357

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           +   +  + I Y  ++    K   ++ AL +++ +  +G    + +Y   I AYC+ GKI
Sbjct: 358 VSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKI 417

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           ++   L +EME  G+ P   T+N LI G  +   IE +    +Q+ + K LP    F+ +
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL-TNKGLPDLVTFHIL 476

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY-KS 298
           +   C  G +++A  +L      G  P  +TY+ ++ GY KEG ++    +  +ME  + 
Sbjct: 477 MEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERR 536

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +   + +Y  L+    Q GKLE+A+     M    LVP    YE +              
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK------------- 583

Query: 359 HLCEEMVSEGLKPST-SYLCSAST 381
              EEMV +G  P    +L + ST
Sbjct: 584 ---EEMVDKGFVPDIEGHLFNVST 604



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 180/408 (44%), Gaps = 40/408 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE+ F+  +     G+ LS +S   L+  + K +R+  V  +Y+ M+     PN  T   
Sbjct: 169 FELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNV 228

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRML 120
           +I+ALCK G++    D+++ +     SP V+   +LI    ++    ++ +   +LK M+
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  +   +++++    K  NL  +L V++EML +    N   Y + I   C  GKI 
Sbjct: 289 ENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKIN 348

Query: 181 EANCLMQEMENAGLKP------------------------YDET-----------FNLLI 205
           EA  +  +M +AG++P                        +D             +N+LI
Sbjct: 349 EAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLI 408

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +   K  +I++  +  E+M    ++P    +N +I  LC  GN + A  +     +KG  
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL- 467

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ +T+  L+ GY   GE ++   L  EM    + P    Y  ++   C+ G L+ A   
Sbjct: 468 PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNM 527

Query: 326 FKIM-KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M K   L   V  Y  L+  + +KG    A  L  EM+ +GL P+
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 176/396 (44%), Gaps = 24/396 (6%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLEN--IRYPNEATIRTL--IS 66
           ++  + GF +  I+ N L   +  S+ N DL  R Y  +++N  I    E T + L  ++
Sbjct: 53  QHWSKLGFHVKDINPNELFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLA 112

Query: 67  ALCKGGQLQTYVDMLDR----------IHGKRCSPMVIVNT----SLILRIIQEERIEEG 112
              +  ++++++D   R           H       V VN+     L+L      R E G
Sbjct: 113 NAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELG 172

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
               KR          ++   ++ A +K         +Y+EM++R    N F +   I A
Sbjct: 173 FEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINA 232

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK---AKRIEESLSYCEQMMSRKL 229
            C+ GK+ +A  +M++M+  G  P   ++N LI+G  K     ++ ++ +  ++M+  ++
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEV 292

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P+ + FN +I    +  N   +  +    LD+   PN ITY+ LI G    G+I E + 
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIG 352

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           +  +M    + P L  Y SLI+  C+ G ++EA   F  +K     P   +Y  L+  + 
Sbjct: 353 MRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYC 412

Query: 350 EKGNKAKALHLCEEMVSEGLKPST-SYLC-SASTCR 383
           + G       L EEM  EG+ P   +Y C  A  CR
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 175/396 (44%), Gaps = 38/396 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE  G    +I++N LI    KS   D   ++ + M      P+  T  T++ +LC  G+
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSGK 224

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  +++LDR   + C P VI  T LI     +  + + M LL  M +K    D + Y++
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L+ A+     M   G   N   +   + + C  G+  +A  L+ +M   G
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 194 LKPYDETFNLLIE---------------------GC--------------AKAKRIEESL 218
             P   TFN+LI                      GC               + K+++ ++
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            Y E M+SR   P    +N ++  LC+ G A  A  +L     KG SP  ITY+ +I G 
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K G+ +   +L  EM  K + P +  Y++L+  L   GK++EA K F  M+  S+ P  
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             Y +++    +    ++A+     MV +G KP+ +
Sbjct: 525 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKA 560



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 168/364 (46%), Gaps = 6/364 (1%)

Query: 12  RYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           ++LE+   +G    +I+  +LI    +S +     RI + +  +   P+  T   LI   
Sbjct: 128 KFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGY 187

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK G++   + +L+R+     +P V+   +++  +    +++E M +L R +++    D 
Sbjct: 188 CKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDV 244

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           I Y++++ A      +  A+ + +EM K+G   +   Y   I   C+ G+++EA   +  
Sbjct: 245 ITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNN 304

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G +P   T N+++       R  ++      M+ +   PS   FN +I  LC    
Sbjct: 305 MPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRL 364

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +L      G  PN ++Y+ L+ G+ +E ++   ++    M  +   P +  Y +
Sbjct: 365 LGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 424

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L+++LC+ GK + A +    + S    P +  Y +++    + G    A  L EEM  +G
Sbjct: 425 LLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKG 484

Query: 369 LKPS 372
           LKP 
Sbjct: 485 LKPD 488



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 150/339 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V     QR     +I++  LI             ++   M +    P+  T   LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +CK G+L   +  L+ +    C P VI +  ++  +    R  +   LL  MLRK    
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + +++++    + R L  A+ V E+M K G   NS  Y   +  +C+  K++ A   +
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M + G  P   T+N L+    K  + + ++    Q+ S+   P    +N +I  L + 
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A  +L     KG  P+ ITYS L+ G   EG++ E +K++++ME  SI P+   Y
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +++  LC+  +   A  +   M      P    Y  L+
Sbjct: 528 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 3/272 (1%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           ++++   +EEG+  L+RM+ +  I D IA + ++    +      A  + E +   G   
Sbjct: 116 KLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVP 175

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +   Y   IG YC+ G+I++A   +Q +E   + P   T+N ++     + +++E++   
Sbjct: 176 DVITYNVLIGGYCKSGEIDKA---LQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVL 232

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++ M R+  P    +  +I   C      QA  +L     KG  P+ +TY+ LI G  KE
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E +K    M      P +  +  ++ S+C  G+  +A++    M      P V  +
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+     K    +A+ + E+M   G  P++
Sbjct: 353 NILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 4/181 (2%)

Query: 193 GLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           G + ++E   N+ +    +   +EE L + E+M+ +  +P   A   +IR  C  G  ++
Sbjct: 101 GSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRK 160

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ++ +  + G  P+ ITY+ LIGGY K GEI + L++   +E  S++P +  Y +++ 
Sbjct: 161 ATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILR 217

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           SLC  GKL+EA +           P V  Y  L+          +A+ L +EM  +G KP
Sbjct: 218 SLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKP 277

Query: 372 S 372
            
Sbjct: 278 D 278



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 99/208 (47%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A DV   + + G   + +S+N L+H   +  + D      + M+    YP+  T 
Sbjct: 363 RLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTY 422

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL++ALCK G+    V++L+++  K CSP++I   ++I  + +  + E    LL+ M R
Sbjct: 423 NTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRR 482

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  D I YS ++        ++ A+ ++ +M       ++  Y   +   C+  +   
Sbjct: 483 KGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 542

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCA 209
           A   +  M   G KP   T+ +LIEG A
Sbjct: 543 AIDFLAYMVEKGCKPTKATYTILIEGIA 570


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 177/369 (47%), Gaps = 4/369 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V + + ++G+   +I + +L+  ++K+   D   ++ Q ++     P E T  + IS
Sbjct: 161 ACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFIS 220

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+++     L R  GK C+  V+    +    + E +IEE + L   M++K +  
Sbjct: 221 GLCKNGRVEE-AGKLVREMGKMCAAEVL--HCIFGGYVLEGKIEEALTLKDEMVKKGVTL 277

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ +++    +R  + A  ++E M+++G   ++  Y   +  +C+ GK++ A  ++
Sbjct: 278 DVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVV 337

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M+ AGL+     +N L++G     R  E+++    M+ + + PS   +N ++  LC+ 
Sbjct: 338 EIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKL 397

Query: 247 GNAKQANGMLTLALDK-GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
           G    A  +L    ++ G  P  ++Y  LI G  K G   E + ++ EM    + P  P+
Sbjct: 398 GQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPS 457

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            TSLI +L    +++EA +  + M    + P    Y +LV +         A  +  EM+
Sbjct: 458 CTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMM 517

Query: 366 SEGLKPSTS 374
                P  S
Sbjct: 518 DNSCVPDGS 526



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 5/255 (1%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LLK M    +    + + +I+ A  + + ++ AL  +  +  R    +   YTT I    
Sbjct: 26  LLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSVSPRS-DLDVVSYTTLIMGLA 84

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + G+I+ A  L +EM ++G +     +  +I    KA R +++++  E+M++RK  P   
Sbjct: 85  DSGRIDVACELFEEMSSSGSQCV-VAYTAIINALFKAHRPDQAIACFERMVARKCDPDLR 143

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            F  +I  LC+ G   +A  +      KG+ P+ I Y+ L+ G +K   + E  KL  E+
Sbjct: 144 TFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEI 203

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             + + PT   YTS IS LC+ G++EEA K  + M         ++   + G ++ +G  
Sbjct: 204 VSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMC---AAEVLHCIFGGYVLEGKI 260

Query: 355 AKALHLCEEMVSEGL 369
            +AL L +EMV +G+
Sbjct: 261 EEALTLKDEMVKKGV 275



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/371 (22%), Positives = 162/371 (43%), Gaps = 44/371 (11%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A+++ + +E  G   S ++   ++  + +    D     Y H +      +  +  T
Sbjct: 20  FSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALS-YFHSVSPRSDLDVVSYTT 78

Query: 64  LISALCKGGQLQTYVDMLDRIH--GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           LI  L   G++    ++ + +   G +C   V+  T++I  + +  R ++ +   +RM+ 
Sbjct: 79  LIMGLADSGRIDVACELFEEMSSSGSQC---VVAYTAIINALFKAHRPDQAIACFERMVA 135

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +    D   +++++    K   L  A  V++EM ++G+  +  VYT+ +    +   ++E
Sbjct: 136 RKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDE 195

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+QE+ + G+KP + T+   I G  K  R+EE+       + R++   C+A      
Sbjct: 196 ARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEA-----GKLVREMGKMCAA------ 244

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                                     E+ +  + GGY  EG+I+E L L  EM  K ++ 
Sbjct: 245 --------------------------EVLHC-IFGGYVLEGKIEEALTLKDEMVKKGVTL 277

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  YT+LI  L    + +EA + F+ M     VP    Y  +V    ++G    A  + 
Sbjct: 278 DVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVV 337

Query: 362 EEMVSEGLKPS 372
           E M + GL+ +
Sbjct: 338 EIMDAAGLEAN 348



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 1/267 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G +L +  +  LIH +    RND    +++ M+     P+  T   ++S  CK G++Q
Sbjct: 272 KKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQ 331

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +++ +          V  SL+   +   R  E + +   MLRK +    + Y++++
Sbjct: 332 AACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILM 391

Query: 136 YAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
               K+     A +V  EM +R G       Y T I    + G+ +EA  +  EM + G+
Sbjct: 392 LGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGV 451

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   +   LI+  A A R++E+      M    + P   A+N +++ LC       A  
Sbjct: 452 VPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWD 511

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKE 281
           +L   +D    P+  T+  +  G+  +
Sbjct: 512 VLVEMMDNSCVPDGSTFRAMKLGFKAD 538



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 2/207 (0%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   I   C  G+   A  L++EME  G+K    T  ++++   + K ++++LSY   + 
Sbjct: 7   YNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSVS 66

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
            R  L   S +  +I  L + G    A  +       G S   + Y+ +I    K     
Sbjct: 67  PRSDLDVVS-YTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAHRPD 124

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + +  +  M  +   P L  +T +I+ LC+ GKL  A + F+ M      P + +Y SLV
Sbjct: 125 QAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLV 184

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               +     +A  L +E+VS G+KP+
Sbjct: 185 DGLSKASMMDEARKLLQEIVSRGMKPT 211


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 3/346 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S  S N L+  +  + R DL  + ++  L     P+  T  T+IS LC+ GQL+   D+ 
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEE---RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
             I     +P V    SLI    ++     +    +LLK M+   +    + + +++   
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K  N  +A+ V+EEM ++G +A+   Y + I   C  GK+EE   LM+EME+ GL P +
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            TF  +++G  K   + ++  + + M  R + P    +  +I      G  + A  +   
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEA 394

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              KG SPN  TY+ LI G+++ G+ +    L  EM+ K I   +  Y  LI +LC  G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           + +A K    M    L P    Y +++    +KGN   A  +   M
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 136/282 (48%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            A  V   ++Q+G + S++++N+LI  +    + +   ++ + M +    PNE T   ++
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK G +    D +D +  +   P V++ T LI    +  ++E+ M + + M +K + 
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +   Y+ ++    +  +  SA  + +EM ++G  A+   Y   IGA C  G++ +A  L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM   GL+P   T+N +I+G      I+ +     +M   +   +   +N  I+  C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            G   +AN +L   LDK   PN ITY  +  G  ++G   ++
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 117/243 (48%), Gaps = 4/243 (1%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           V  + ++ A   +   L+R  S + + + T I   C  G++ +A  + ++++  GL P  
Sbjct: 167 VGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSV 226

Query: 199 ETFNLLIEG-CAK--AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
            T+N LI+G C K  A  +       ++M+   + P+   F  +I   C+  N   A  +
Sbjct: 227 ATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRV 286

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G + + +TY+ LI G   EG+++E +KL  EME   +SP    +  ++   C+
Sbjct: 287 FEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCK 346

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TS 374
            G + +A+ +   M   ++ P V IY  L+  +   G    A+ + E M  +G+ P+ T+
Sbjct: 347 KGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTT 406

Query: 375 YLC 377
           Y C
Sbjct: 407 YNC 409



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 3/181 (1%)

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   + N L+ G   AKR++ +       + R++ P    FN +I  LC  G  ++A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKE---GEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           +       G +P+  TY+ LI GY K+   G +  V  L  EM    ISPT   +  LI+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+      A + F+ MK   +   V  Y SL+     +G   + + L EEM   GL P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 372 S 372
           +
Sbjct: 333 N 333


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 168/365 (46%), Gaps = 15/365 (4%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-------PNEATIRTLISALC 69
           RG +  ++++N L+    K        R Y+  LE I +       PN  T   +I A+C
Sbjct: 192 RGCAPDVVTYNILLQAACKG-------RGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G +    ++L+ +  + C P  +   +++      ER  +   +L  M+R+N   +  
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
             ++I+    +   L+   +  E+M K G +AN   Y   I   CE G ++ A  L+  M
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           ++ G KP   T+N +++G   A R E++     +M     LP  S FN +I   C+ G  
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            QA  +     +KG +PN  TYS +IGG  K G++++ L+L  EM  K  + T   Y  L
Sbjct: 425 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFN-TDKMYRVL 483

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             SL +  K+EE  +    ++   + P   +Y +++      G    A+ +  +MVS G 
Sbjct: 484 TESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGC 543

Query: 370 KPSTS 374
            P  S
Sbjct: 544 MPDES 548



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 145/318 (45%), Gaps = 1/318 (0%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           AT   L+   C+ G L+    ++  +     +     +  LI  + +  R+ + +V+L  
Sbjct: 129 ATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDG 188

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           ML +    D + Y++++ A  K R    AL + + M   G   N+  Y   I A C  G 
Sbjct: 189 MLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGD 248

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +++A  L+  + + G KP    +N +++G    +R  ++    ++M+     P+ +  N 
Sbjct: 249 VDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNV 308

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  LC  G  ++    L      G + N +TY+ +I G  ++G +   L+L   M+   
Sbjct: 309 IINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFG 368

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P +  Y +++  LC   + E+A++    M  +  +P    + +++    +KG   +A 
Sbjct: 369 CKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAF 428

Query: 359 HLCEEMVSEGLKP-STSY 375
            + ++M  +G  P ST+Y
Sbjct: 429 EVFKQMPEKGCNPNSTTY 446



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/367 (20%), Positives = 160/367 (43%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R +E  G   +  ++  L+    ++   +   R+   M  +++  +      LI AL
Sbjct: 114 DAARVVEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHAL 173

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G++   + +LD +  + C+P V+    L+    +     + + L+  M  +    + 
Sbjct: 174 CERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNN 233

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y++I+ A  +  +++ A  +   +  RG   N+  Y T +  +C   +  +A+ ++ E
Sbjct: 234 VTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDE 293

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M      P + T N++I    +   +++   Y E+M       +   +N +I  +CE GN
Sbjct: 294 MVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGN 353

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A  +L+     G  P+ +TY+ ++ G       ++  +L  +M      P    + +
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNT 413

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +IS  CQ G + +A + FK M      P    Y +++G   + G   +AL L  EM ++G
Sbjct: 414 IISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG 473

Query: 369 LKPSTSY 375
                 Y
Sbjct: 474 FNTDKMY 480



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 113/237 (47%), Gaps = 1/237 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A ++   ++  G    ++++NT++  +  +DR +    +   M +N R P+ +T  T
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNT 413

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +IS  C+ G +    ++  ++  K C+P     +++I  + +  ++E+ + LL  M  K 
Sbjct: 414 IISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG 473

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y ++  +  K   +E  + V  ++   G S  + +Y T +   C  GK + A 
Sbjct: 474 FNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAI 532

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            ++ +M + G  P + T+ +LIEG       +E+     ++ SR +L +    NE +
Sbjct: 533 DVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEAL 589


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 164/363 (45%), Gaps = 2/363 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S+N L+ V+ KS R D V+  Y  ML     PN  T   L+ +LC+  + +    +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  + CSP V   + LI  + + ++++E   LL  M+      + + Y  ++    KM  
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ ++  M+ RG   +  VY   I  + + G + EA  L +EM   G  P   T+N 
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+ G ++        S  + M+ +  +P+   FN ++   C+ G+  +A+ +       G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ ++Y+ L+ G   +G+  E  +L  EM    + P + +Y  LI    + G L+ A 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS--AST 381
           K F  +    L P    Y +++      G    A  + ++M++ G  P  + +       
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 382 CRG 384
           CRG
Sbjct: 378 CRG 380



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 163/352 (46%), Gaps = 38/352 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  V R +  +G S ++ S++ LI  + +  + D    +   M++    PN  T  +
Sbjct: 68  FEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGS 127

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+S LCK G+L+  VD+  R+  + C P  +V   LI    ++  + E   L + ML K 
Sbjct: 128 LLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKG 187

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            I     Y+ ++    +         ++++ML++G   N F +   +  +C+ G + EA+
Sbjct: 188 CIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAH 247

Query: 184 CLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            L  EM + G  P   ++N L+ G C+K K  E          +++LL       EMIR 
Sbjct: 248 RLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE----------AQRLL------REMIR- 290

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
                               G  P+ ++Y+ LI GY+K G +   +KL+YE+    + P 
Sbjct: 291 -------------------SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             +Y+++I  LC+ GK+  A   FK M ++   P   +   LV I L +G +
Sbjct: 332 AFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLV-IGLCRGER 382



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 120/248 (48%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           H T++Y+ ++    K    +     Y +ML  G   N++ Y   + + C+  + EEA  +
Sbjct: 15  HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            + M   G  P   ++++LI G  + ++++E+     +M+     P+   +  ++  LC+
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  K+A  + +  + +G  P+ + Y+ LI G++K+G++ E  +L+ EM  K   PT+  
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT 194

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y SL+S   + G+       FK M     VP +  + +L+    + G+  +A  L  EM 
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254

Query: 366 SEGLKPST 373
           S G  P  
Sbjct: 255 SLGCPPDV 262



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 117/252 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   ++ ++N+L+   ++      V  +++ ML     PN  T   L+   CK G + 
Sbjct: 185 EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMV 244

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +   +    C P V+   +L+  +  + +  E   LL+ M+R  +  D ++Y++++
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   L+ A+ ++ E+ K G   ++F Y+T I   C  GK+  A  + ++M   G  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P       L+ G  + +R+ ES    + M+  + +P    +N ++ +LC+   +     +
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEI 424

Query: 256 LTLALDKGFSPN 267
                ++GFSP+
Sbjct: 425 FHELTERGFSPD 436



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 97/214 (45%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           ++  +  Y   +    + G+ +       +M  AG  P   T+  L+    +A+R EE+ 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S    M ++   P+  +++ +I  LC      +A  +L   +D G  PN +TY  L+ G 
Sbjct: 73  SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K G+++E + L+  M Y+   P    Y  LI    + G + EA + F+ M     +P V
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y SL+     KG   +   L ++M+ +G  P+
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 183/370 (49%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +   L +RG   S++SFN+++  + K  + D    ++  M ++ + PN +T   
Sbjct: 332 FDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK-PNISTYNI 390

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC  G++     + D +      P ++    ++ R+ +  ++EE   + +    + 
Sbjct: 391 IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +++ Y  ++    K   ++ A  ++E+ML  G  AN  +YT+ I  +  +G+ E+ +
Sbjct: 451 CNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGH 510

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM   G +P     N  ++   KA  +E+  +  E M S   LP   +++ +I  L
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A++ + +      +GF+ +   Y+ ++ G  K G++ +  ++  EM+ K + PT+
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S++  L +  +L+EA   F+  KS  +   V +Y SL+    + G   +A  + EE
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690

Query: 364 MVSEGLKPST 373
           M+ +GL P+ 
Sbjct: 691 MMKKGLTPNV 700



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 182/405 (44%), Gaps = 39/405 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   +E  G   +L+S N ++  + K+++ +   RI++   E    PN  T  +LI 
Sbjct: 404 AYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLID 463

Query: 67  ALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN- 123
            L K G++     + +++   G   +P  I+ TSLI       R E+G  + K M+R+  
Sbjct: 464 GLGKKGKIDDAYRLFEKMLDAGHDANP--IIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG 521

Query: 124 ----------------------------------MIHDTIAYSLIVYAKVKMRNLESALV 149
                                              + D  +YS++++   K         
Sbjct: 522 RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSN 581

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +++ M ++GF+ ++  Y   +   C+ GK+++A  +++EM+   + P   T+  +++G A
Sbjct: 582 IFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLA 641

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  R++E+    E+  S+ +  +   ++ +I    + G   +A  +L   + KG +PN  
Sbjct: 642 KIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 701

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           T++ L+    K  EI E L  +  M+    SP    Y+ LI+ LC+  K  +A  +++ M
Sbjct: 702 TWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 761

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +   L+P V  Y +++    + GN   A  L E   + G  P ++
Sbjct: 762 QKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA 806



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/403 (21%), Positives = 172/403 (42%), Gaps = 36/403 (8%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVT--------------------------- 34
           R  E A ++ R ++  G+ +S+  F TL+  +                            
Sbjct: 190 RQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLY 249

Query: 35  --------KSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
                   K+   D+ W+ +  +  +   P++ +  +++  LCK G+L    ++  ++  
Sbjct: 250 NVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEA 309

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           +R  P      ++I+     ER ++   LL+R+  +  I   ++++ I+    K R ++ 
Sbjct: 310 ERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDE 369

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +++ M K+    N   Y   I   C  G++ EA  +  EME AGL P   + N++++
Sbjct: 370 ALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVD 428

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              KA ++EE+    E    R   P+   +  +I  L + G    A  +    LD G   
Sbjct: 429 RLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDA 488

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N I Y+ LI  +   G  ++  K+Y EM  +   P L    + +  + + G++E+    F
Sbjct: 489 NPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIF 548

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + MKS   +P V  Y  L+    + G   +  ++ + M  +G 
Sbjct: 549 EDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGF 591



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 158/338 (46%), Gaps = 4/338 (1%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FDV +   +   S    ++N +I ++  + R +  ++I   M     +PN  ++  ++  
Sbjct: 374 FDVMKKDAKPNIS----TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDR 429

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK  QL+    + +    + C+P  +   SLI  + ++ +I++   L ++ML      +
Sbjct: 430 LCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDAN 489

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            I Y+ ++         E    +Y+EM++RG   +  +  T++    + G++E+   + +
Sbjct: 490 PIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFE 549

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M++ G  P   ++++LI G  KA +  E+ +  + M  +       A+N ++  LC+ G
Sbjct: 550 DMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSG 609

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +A  +L     K   P   TY  ++ G AK   + E   L+ E + K I   +  Y+
Sbjct: 610 KVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYS 669

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           SLI    + G+++EA    + M    L P V  + SL+
Sbjct: 670 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 145/305 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   + S++ LIH +TK+ +      I+Q M +     +      ++  LCK G++   
Sbjct: 555 GFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKA 614

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++L+ +  K   P V    S++  + + +R++E  +L +    K +  + I YS ++  
Sbjct: 615 YEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDG 674

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A ++ EEM+K+G + N + + + + A  +  +I+EA    Q M+     P 
Sbjct: 675 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPN 734

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI G  + ++  ++  + ++M  + L+P+   +  MI  L + GN   A  +  
Sbjct: 735 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFE 794

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G  P+  +++ LI G +      E  +++ E   +     +    SL+ +L +  
Sbjct: 795 RFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTE 854

Query: 318 KLEEA 322
            LE+A
Sbjct: 855 CLEQA 859



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 159/353 (45%), Gaps = 5/353 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+ L   +   L+  + +S R +  +R+   M      P  +    LI AL +  Q +  
Sbjct: 136 GYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERA 195

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +++L ++        V + T+L+  + +E ++E  + L+  +    +  D + Y++ +  
Sbjct: 196 LELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDC 255

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  +++ A   + E+   G   +   YT+ +   C+ G++ EA  L  +ME     P 
Sbjct: 256 FGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPC 315

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +N +I G   A+R +++    E++  R  +PS  +FN ++  L   G  ++ +  LT
Sbjct: 316 AYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCL---GKKRKVDEALT 372

Query: 258 L--ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   + K   PN  TY+ +I      G + E  K+  EME   + P L +   ++  LC+
Sbjct: 373 LFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCK 432

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             +LEEA + F+        P    Y SL+    +KG    A  L E+M+  G
Sbjct: 433 ANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAG 485



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 119/244 (48%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           ++ + + Q+GF+L   ++N ++  + KS + D  + + + M     +P  AT  +++  L
Sbjct: 581 NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGL 640

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
            K  +L     + +    K     VI+ +SLI    +  RI+E  ++L+ M++K +  + 
Sbjct: 641 AKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
             ++ ++ A VK   ++ AL+ ++ M +   S N++ Y+  I   C   K  +A    QE
Sbjct: 701 YTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQE 760

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M+  GL P   T+  +I G AK   I ++ S  E+  +   +P  ++FN +I  +     
Sbjct: 761 MQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANR 820

Query: 249 AKQA 252
             +A
Sbjct: 821 PMEA 824



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 102/221 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++V   ++ +    ++ ++ +++  + K DR D  + +++         N     +LI 
Sbjct: 614 AYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLID 673

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +L+ +  K  +P V    SL+  +++ E I+E ++  + M       
Sbjct: 674 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSP 733

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T  YS+++    +++    A V ++EM K+G   N   YTT I    + G I +A  L 
Sbjct: 734 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLF 793

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           +  +  G  P   +FN LIEG + A R  E+    E+   R
Sbjct: 794 ERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLR 834



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 100/235 (42%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V EEM   G+   +      +       ++E+A  ++  M +   +P    + +LI   A
Sbjct: 128 VLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALA 187

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +A++ E +L    QM       S   F  ++R L   G  + A  ++         P+ +
Sbjct: 188 EARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIV 247

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+  I  + K G +    K ++E++   + P   +YTS++  LC+ G+L EA++ F  M
Sbjct: 248 LYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
           ++   VP    Y +++  +        A  L E +   G  PS     S  TC G
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLG 362



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 1/245 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           A + +V   V+ R LE A  V   M    F      YT  IGA  E  + E A  L+++M
Sbjct: 143 ACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQM 202

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           ++ G +     F  L+   A+  ++E +L+  +++    L P    +N  I    + G+ 
Sbjct: 203 QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSV 262

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A          G  P++++Y+ ++    K G + E  +L+ +ME +   P   AY ++
Sbjct: 263 DMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTM 322

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I       + ++A K  + ++    +P V  + S++    +K    +AL L + M  +  
Sbjct: 323 IMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA- 381

Query: 370 KPSTS 374
           KP+ S
Sbjct: 382 KPNIS 386


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 162/359 (45%), Gaps = 3/359 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRTLISALCKGGQ 73
           Q G   S+ ++NTL+    K+ R D    + + M        PN+ T   +I+ L + G+
Sbjct: 222 QLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGE 281

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+    ++D +   + +     N  LI  ++  + +E+   LL  M  + ++   + Y+ 
Sbjct: 282 LEKAAQLVDIMRLSKKASAFTYN-PLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNT 340

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  N E+A V ++EM  +G   +   Y + I  YC+ G +++A CL  +++ AG
Sbjct: 341 LIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAG 400

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N+LI+G  +   +E +    E+M     LP    +  ++   C   N     
Sbjct: 401 LGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVR 460

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 L KG  P+   Y+  I      G I    +L  EM  + IS     Y  LI  L
Sbjct: 461 IFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGL 520

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G L++A   +  M +  L      Y  L+  H E+G   +A ++ + MV+ GL PS
Sbjct: 521 CKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPS 579



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 162/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G   +++++NTLI  + K+   +     +  M      P+  T  +LI+  CK G 
Sbjct: 326 MENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGN 385

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  + +   +      P V+    LI    +   +E    L + M  ++ + D   Y++
Sbjct: 386 LKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTI 445

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +RNL    + ++EML +G   + F Y T I A    G I  A  L +EM   G
Sbjct: 446 LMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRG 505

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +     T+N+LI+G  K   ++++     +M++  L   C  +  +I   CE G   +A 
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAK 565

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    +  G SP+ +TY+  I  Y + G +      + +M  + + P    Y  L+ +L
Sbjct: 566 NIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G+ E A ++F  M    LVP    Y  L+    ++GN   A+ L  EM  +G+ P 
Sbjct: 626 CRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPD 684



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 149/349 (42%), Gaps = 38/349 (10%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N ++ V+  + R D +  +Y  ML+    P+  T  TL+ + CK G              
Sbjct: 198 NCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAG-------------- 243

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK--NMIHDTIAYSLIVYAKVKMRNL 144
                                R+++ + LLK M  +    + + + Y++++    +   L
Sbjct: 244 ---------------------RMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGEL 282

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  + + +++    A++F Y   I        +E+A  L+ EMEN G+ P   T+N L
Sbjct: 283 EKAAQLVD-IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTL 341

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K    E +    ++M ++ LLP    +N +I   C+ GN KQA  +       G 
Sbjct: 342 IDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGL 401

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  +TY+ LI GY + G+++   +L  EM  +   P +  YT L++  C    L     
Sbjct: 402 GPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRI 461

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +F  M S  L P    Y + +   L  G    A  L EEM+  G+   T
Sbjct: 462 FFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDT 510



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 2/253 (0%)

Query: 38  RNDLVWRIY-QHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN 96
           RN  + RI+   ML     P+     T ISA    G +     + + +  +  S   +  
Sbjct: 454 RNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTY 513

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             LI  + +   +++  VL  +M+   +  D + Y+ +++A  +   L  A  +++ M+ 
Sbjct: 514 NVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVA 573

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G S +   YT FI  YC  G +  A    ++M   G++P + T+N+L+    +  R E 
Sbjct: 574 SGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTES 633

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +  +  +M+ R L+P+   +  +I   C+ GN   A  +      KG  P+  T++ L  
Sbjct: 634 AYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFK 693

Query: 277 GYAKEGEIQEVLK 289
           G+  EG + + ++
Sbjct: 694 GFG-EGHMYDAVQ 705



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 3/159 (1%)

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           + LS  ++M    + P     N ++R L +         + +  L  G  P+  TY+ L+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSIS--PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
             + K G + + + L  +ME ++    P    Y  +I+ L + G+LE+A +   IM+   
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK 296

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                  Y  L+   L +    KA  L  EM +EG+ P+
Sbjct: 297 KASAF-TYNPLITGLLARDFVEKAGALLLEMENEGIVPT 334



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 21/86 (24%), Positives = 40/86 (46%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A+   R + + G   + +++N L+H + +  R +  ++ +  MLE    PN+ T   LI
Sbjct: 598 LAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLI 657

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSP 91
              CK G     + +   +H K   P
Sbjct: 658 DGSCKEGNWVHAIRLYCEMHQKGIHP 683


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 165/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G   +L+++N +IH + KS++ +     +  M      P+  T  ++++  CK G 
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGN 399

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  + +L  +     +P V+   +LI    +   +EE   L + M+ +    D   Y++
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+RNL  A   ++EML +G   + F Y T I A    G   +A  L + M   G
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKG 519

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N++I+G  K   ++++     +M+S  L P C  +  +I   CE G   +A 
Sbjct: 520 IYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEAR 579

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   +  G  P+ +TY+ LI    + G +      + +M    I P    Y  LI +L
Sbjct: 580 KLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 639

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G+   A  +F  M    L P    Y  L+  +  +GN A A+ L  EM   G+ P 
Sbjct: 640 CRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 698



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 148/313 (47%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T   LI+AL + G +Q    +   +  +   P ++   ++I  +++ E++E   +    M
Sbjct: 316 TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM 375

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               ++ D I Y+ ++    K  NL+ AL +  ++ + G +     Y T I  YC  G +
Sbjct: 376 RAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGL 435

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           EEA  L +EM   G  P   T+ +L+ G  K + +  +  + ++M+S+ L P C A+N  
Sbjct: 436 EEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTR 495

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I      G+  +A  +  + + KG  P+ +TY+ +I G  K G +++   L  +M    +
Sbjct: 496 ICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGL 555

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    YT LI + C+ G L EA K    M S  L P V  Y  L+     +GN   A  
Sbjct: 556 QPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYG 615

Query: 360 LCEEMVSEGLKPS 372
              +M+  G++P+
Sbjct: 616 WFRKMLDVGIEPN 628



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 5/286 (1%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN---MIHDTIAYSLIVYAKVKMRNLESA 147
           P ++   +L+   ++E R +E  +LLK M  +    +++D + Y++++    +  +LE+A
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLND-VTYNVVISFLAREGHLENA 299

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             + + M +    A+SF Y   I A  E G +++   L  EMEN G+ P   T+N +I G
Sbjct: 300 AKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHG 358

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K++++E +     +M +  LLP    +N M+   C+ GN K+A  +L      G +P 
Sbjct: 359 LLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPT 418

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            +TY+ LI GY + G ++E  +L  EM  +   P +  YT L++   +   L  A ++F 
Sbjct: 419 VLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFD 478

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            M S  L P    Y + +   L  G+  KA  L E M+ +G+ P T
Sbjct: 479 EMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDT 524



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 147/315 (46%), Gaps = 3/315 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + G + +++++NTLI    +    +   R+ + M+E   +P+  T   L++   K   
Sbjct: 410 LRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRN 469

Query: 74  LQTYVDMLDRIHGKRCSPMVIV-NTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           L    +  D +  K   P     NT +   +I  +   +   L + M+ K +  DT+ Y+
Sbjct: 470 LPMAREFFDEMLSKGLQPDCFAYNTRICAELILGD-THKAFQLREVMMLKGIYPDTVTYN 528

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +I+    K  NL+ A  +  +M+  G   +   YT  I A+CE G + EA  L+  M + 
Sbjct: 529 VIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSD 588

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           GL+P   T+ +LI  C +   +  +  +  +M+   + P+   +N +I  LC  G    A
Sbjct: 589 GLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLA 648

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
                  L++G +PN+ TY+ LI G  +EG   + ++LY+EM    I P    + +L   
Sbjct: 649 YHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 708

Query: 313 LCQCGKLEEADKYFK 327
             + G +  A +Y +
Sbjct: 709 FDK-GHMYHAIEYLE 722



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 5/227 (2%)

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN--AGLKPYDETFNLLIE 206
            VY EML+         Y T + ++ + G+ +EA+ L++EME    G    D T+N++I 
Sbjct: 229 AVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVIS 288

Query: 207 GCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
             A+   +E +    + M +S+K   S   +N +I  L E G  ++   +     ++G  
Sbjct: 289 FLAREGHLENAAKLVDSMRLSKK--ASSFTYNPLITALLERGFVQKVEALQMEMENEGIM 346

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P  +TY+ +I G  K  +++     + EM    + P L  Y S+++  C+ G L+EA   
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              ++   L P V  Y +L+  +   G   +A  L EEMV +G  P 
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPD 453



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 9/223 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKS----DRNDLVWRIYQHMLENIRYPNEATIR 62
           AF +   +  +G     +++N +I  + K+    D  DL  ++    L+    P+  T  
Sbjct: 508 AFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQ----PDCITYT 563

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI A C+ G L     +L+ +      P V+  T LI    +   +       ++ML  
Sbjct: 564 CLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDV 623

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + I Y+++++A  +      A   + EML+RG + N + YT  I   C  G   +A
Sbjct: 624 GIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADA 683

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
             L  EM   G+ P   T N L +G  K   +  ++ Y E ++
Sbjct: 684 IRLYFEMHQNGIPPDYCTHNALFKGFDKG-HMYHAIEYLENIV 725


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 164/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + ++N +I    K ++ +   ++   M      P+  T   +I +LC   +L   + +L
Sbjct: 146 DVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVL 205

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D++    C P VI  T LI   I E  I E M LL+ ML + ++ D   Y+ I+    K 
Sbjct: 206 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 265

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +E A  +   +  +G   +   Y   + A+   GK +E   L+ EM + G +P   T+
Sbjct: 266 GMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 325

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++LI    +  RI+E++S  + M+ ++L P   +++ +I  LC+ G    A G++   + 
Sbjct: 326 SILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 385

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+ + Y+ ++    K G   + L+++ ++      P + +Y ++IS+L  CG    
Sbjct: 386 NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR 445

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A      M S  + P    Y SL+      G   +A+ L ++M   G +P+
Sbjct: 446 ALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 496



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 168/355 (47%), Gaps = 2/355 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++I++  LI         +   ++ + ML     P+  T   +I  +CK G ++   +++
Sbjct: 216 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 275

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K C P VI    L+   + + + +EG  L+  M  +    + + YS+++ +  + 
Sbjct: 276 TSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 335

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A+ V + M+++  + +++ Y   I A C+ G+++ A  +M  M + G  P    +
Sbjct: 336 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 395

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N ++    K     ++L    ++      P+ S++N MI  L  CG+  +A GM+   + 
Sbjct: 396 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 455

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P+EITY+ LI    ++G ++E + L  +ME     PT+ +Y  ++  LC+  ++++
Sbjct: 456 KGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 515

Query: 322 ADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           A   F  M      P    Y  L+ GI    G + +A+ L   + S  +    S+
Sbjct: 516 AIGMFAEMIEKGCRPNETTYILLIEGIGF-AGWRTEAMELANSLFSRDVISQDSF 569



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 154/324 (47%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +LE+   P+      +IS  CK  Q++    +L+R+  +   P ++    +I  +    +
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +   + +L ++L  N +   I Y++++ A +    +  A+ + EEML RG   + + Y  
Sbjct: 198 LGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 257

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C+ G +E A  L+  + + G +P   ++N+L+       + +E      +M SR 
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   ++ +I  LC  G   +A  +L + ++K  +P+  +Y  LI    KEG +   +
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            +   M      P +  Y +++++LC+ G   +A + F  ++     P V  Y +++   
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
              G++++AL +   M+S+G+ P 
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPD 461



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 170/375 (45%), Gaps = 3/375 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  V   ++ RGF   ++++N +I  +    +  L   +   +L +   P   T   
Sbjct: 163 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTI 222

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A    G +   + +L+ +  +   P +    ++I  + +E  +E    L+  +  K 
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I+Y++++ A +     +    +  EM  RG   N   Y+  I + C +G+I+EA 
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++ M    L P   +++ LI    K  R++ ++   + M+S   LP    +N ++  L
Sbjct: 343 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 402

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ GNA QA  +       G  PN  +Y+ +I      G+    L +   M  K I P  
Sbjct: 403 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDE 462

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCE 362
             Y SLIS LC+ G +EEA      M+     P V  Y ++V + L K  +   A+ +  
Sbjct: 463 ITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY-NIVLLGLCKVRRIDDAIGMFA 521

Query: 363 EMVSEGLKPS-TSYL 376
           EM+ +G +P+ T+Y+
Sbjct: 522 EMIEKGCRPNETTYI 536



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 36/309 (11%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  +  +  E +  L+ ++ K    D I  + ++      +N+E A  V E +L+  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESH 142

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN---------------- 202
              + F Y   I  +C+  +IE A  ++  M+  G  P   T+N                
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 203 -------------------LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
                              +LIE       I E++   E+M++R LLP    +N +IR +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  ++T    KG  P+ I+Y+ L+  +  +G+  E  KL  EM  +   P  
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LISSLC+ G+++EA    K+M    L P    Y+ L+    ++G    A+ + + 
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 364 MVSEGLKPS 372
           M+S G  P 
Sbjct: 383 MISNGCLPD 391



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 129/288 (44%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A ++   L  +G    +IS+N L+       + D   ++   M      PN+ T  
Sbjct: 267 MVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 326

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LIS+LC+ G++   + +L  +  K  +P       LI  + +E R++  + ++  M+  
Sbjct: 327 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 386

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + D + Y+ I+ A  K  N   AL ++ ++   G   N   Y T I A    G    A
Sbjct: 387 GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRA 446

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++  M + G+ P + T+N LI    +   +EE++   + M      P+  ++N ++  
Sbjct: 447 LGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLG 506

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           LC+      A GM    ++KG  PNE TY  LI G    G   E ++L
Sbjct: 507 LCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 68/135 (50%), Gaps = 1/135 (0%)

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
           +++ R C+ G   ++   L   ++KG++P+ I  + LI G+     I++  ++   +E  
Sbjct: 83  KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH 142

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           +  P + AY ++IS  C+  ++E A +    MK+   +P +  Y  ++G    +     A
Sbjct: 143 T-EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 201

Query: 358 LHLCEEMVSEGLKPS 372
           L + ++++ +   P+
Sbjct: 202 LTVLDQLLLDNCMPT 216


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 158/370 (42%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F   FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 103 FXXPFDTCRKVLEHLMKLKYFK---------------LVWGFYKEILE-CGYPXSLYFFN 146

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 147 ILMHRFCKDGDIRVAXSVFDAITKWGLRPSVV---------------------------- 178

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   M   G   + + Y+  I   C+  K+++A
Sbjct: 179 -------SYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDA 231

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ LLP    +N +I  
Sbjct: 232 NELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYG 291

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQAN ++     KG  P++ITY+ LI G  KEG +    +    M  ++I   
Sbjct: 292 LCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLD 351

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    +KG+  K   L +
Sbjct: 352 DVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLK 411

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 412 EMQRDGHVPS 421



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 146/312 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +   + + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y   I   C+ G ++
Sbjct: 240 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +AN L+ EM   GLKP   T+  LI+GC K   ++ +  +  +M+   +     A+  +I
Sbjct: 300 QANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G    A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 360 SGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 45/294 (15%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 24  TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIYVFSGLIXAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + ++++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKFXXPFD-TCRKVLEHLMKLKYFKLVWGFYKEILECGYPXSL 142

Query: 234 SAFNEMIRRLCECGNAKQA-----------------------NGMLTLA-LDKGF----- 264
             FN ++ R C+ G+ + A                       NG + L  LD+GF     
Sbjct: 143 YFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 265 ------SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
                  P+  TYS LI G  KE ++ +  +L+ EM  K + P    +T+LI   C+ G+
Sbjct: 203 MXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 262

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++ A + +K M S SL+P +  Y  L+    +KG+  +A  L  EM  +GLKP 
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPD 316


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 154/316 (48%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N  +   LI  LC+ G+L   ++   R+    C P V   T L+  + +  R  E + L 
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLF 313

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M  +    +   Y++++    K   ++ AL +  EM+++G + +   +   IG+YC+ 
Sbjct: 314 GEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKR 373

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G +E+A  ++  ME+  + P   T+N LI G  + K ++ +++   +M+  KL P    +
Sbjct: 374 GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTY 433

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I  LCE G    A+ +  L +  GFSP++ T++  +    + G + E  ++   ++ 
Sbjct: 434 NTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKE 493

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K +     AYT+LI   C+ GK+E A   FK M +   +P    +  ++    ++G    
Sbjct: 494 KHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQD 553

Query: 357 ALHLCEEMVSEGLKPS 372
           A+ L E+M    +KP+
Sbjct: 554 AMLLVEDMAKFDVKPT 569



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 169/359 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG   ++ ++  LI  + K  R D   ++   M+E    P+      LI + CK G 
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  V +L  +  K+  P V     LI    + + ++  M LL +M+   +  D + Y+ 
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNT 435

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   ++  ++SA  ++  M++ GFS + + +  F+   C  G++ EA+ +++ ++   
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKH 495

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +K  +  +  LI+G  KA +IE + S  ++M++ + LP+   FN MI  L + G  + A 
Sbjct: 496 VKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAM 555

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++         P   TY+ L+    KE +     ++   +      P +  YT+ I + 
Sbjct: 556 LLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAY 615

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G+LEEA++    +K+  ++    IY  L+  +   G    A  +   M   G +PS
Sbjct: 616 CSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPS 674



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 175/393 (44%), Gaps = 34/393 (8%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE---NIRYPNEATIRTLISALCKG 71
            Q  F LSL S+N L+  +++    D +  +Y+ ML    N  +PN  T+ T++++ CK 
Sbjct: 143 HQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKL 202

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI------ 125
           G +        RI      P +   TSL+L   + + +E    +   M R+N +      
Sbjct: 203 GNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLI 262

Query: 126 ---------HDTI----------------AYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
                    H+ +                 Y+++V A  +      AL ++ EM +RG  
Sbjct: 263 HGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCE 322

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            N + YT  I   C+ G+++EA  ++ EM   G+ P    FN LI    K   +E+++  
Sbjct: 323 PNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGV 382

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
              M S+K+ P+   +NE+I   C   +  +A  +L   ++   SP+ +TY+ LI G  +
Sbjct: 383 LGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCE 442

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G +    +L+  M     SP    + + +  LC+ G++ EA +  + +K   +      
Sbjct: 443 VGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHA 502

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           Y +L+  + + G    A  L + M++E   P++
Sbjct: 503 YTALIDGYCKAGKIEHAASLFKRMLAEECLPNS 535



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 164/375 (43%), Gaps = 29/375 (7%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + + GFS    +FN  +  + +  R     +I + + E     NE     LI   CK 
Sbjct: 454 RLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKA 513

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+++    +  R+  + C P  I    +I  + +E ++++ M+L++ M + ++      Y
Sbjct: 514 GKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTY 573

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           +++V   +K  + + A  +   ++  G+  N   YT FI AYC  G++EEA  ++ +++N
Sbjct: 574 NILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKN 633

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+      +NLLI        ++ +     +M      PS   ++ +++ L    + K+
Sbjct: 634 EGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKE 693

Query: 252 AN-------------------------GMLTLALDK----GFSPNEITYSHLIGGYAKEG 282
            +                         G+ T+  +K    G  PN  TYS LI G  K G
Sbjct: 694 GSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVG 753

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            +     LY+ M    ISP+   + SL+SS C+ G   EA      M   S +  ++ Y+
Sbjct: 754 RLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYK 813

Query: 343 SLVGIHLEKGNKAKA 357
            L+    E+ NK KA
Sbjct: 814 LLICGLFEQMNKEKA 828



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 103/240 (42%), Gaps = 29/240 (12%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLI-HVVTKSDR-------------------ND 40
           M L + AF V R +   G   S ++++ L+ H+V +  +                   N 
Sbjct: 653 MGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNT 712

Query: 41  LVWR---------IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSP 91
            +W          +++ M E    PN  T   LI+ LCK G+L     +   +     SP
Sbjct: 713 DIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISP 772

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
             I++ SL+    +     E + LL  M+  + +    +Y L++    +  N E A  V+
Sbjct: 773 SEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVF 832

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
             +L+ G++ +   +   I    + G +++ + L+  ME  G + + ET+++L++   +A
Sbjct: 833 CSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 173/379 (45%), Gaps = 6/379 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R F+ A  V + +  RG   + + F+ ++H + +  R   V  +++   E+  + +    
Sbjct: 344 RNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAY 403

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L  ALCK G++   V MLD +   +    +   T+LI     + +  E   L K M  
Sbjct: 404 NILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEE 463

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +    D +AY+++     + R    A+ +   M  +G   NS  +   I   C  GK+EE
Sbjct: 464 RGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEE 523

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE------QMMSRKLLPSCSA 235
           A      ++   ++   E +  L+ G  +A  IE+S    E       M+   + PS   
Sbjct: 524 AEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVM 583

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++++   LC  GN + A+ +  L +  GF+P+ +TY+ +I GY K   + E  +L+ +M+
Sbjct: 584 YSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMK 643

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + I+P    YT +I+  C+   L EA + FK MK   + P V  Y  ++   L  G+  
Sbjct: 644 ERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTE 703

Query: 356 KALHLCEEMVSEGLKPSTS 374
            A  L  EM+  G+ P  +
Sbjct: 704 IAFQLYNEMIDMGMTPGAT 722



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 174/391 (44%), Gaps = 11/391 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSL--ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           EV   +C ++  + F L     ++  +I  + K    + V R++  M E     +     
Sbjct: 205 EVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYA 264

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T I  LCK  +      +L     +         T++I     E +++E   +   M ++
Sbjct: 265 TFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQ 324

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D   Y  +V+     RN + AL VY+ M+ RG   N  +++  +    E G+  E 
Sbjct: 325 GLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEV 384

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             + +E + +GL    + +N+L +   K  ++++++   +++ S +L      +  +I  
Sbjct: 385 VDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLING 444

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
               G   +A  +     ++GF P+ + Y+ L  G+ +     E + L   ME + + P 
Sbjct: 445 YFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPN 504

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH-----LEKGNKAK- 356
              +  +I  LC  GK+EEA+++F  +K  S+   V+IY +LV  +     +EK ++ K 
Sbjct: 505 STTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKE 564

Query: 357 ALHLCEEMVSEGLKPST---SYLCSASTCRG 384
           A  L   M+   +KPS    S + +A  C G
Sbjct: 565 AFILLRTMLEMNMKPSKVMYSKIFTALCCNG 595



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 129/283 (45%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P ++    LI R+++ + ++  + L  R     +I +   Y++++ A  K  + E+ + V
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           ++EM + G   +S+ Y TFI   C+  + +    ++Q+        +   +  +I G   
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCN 307

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
             +++E+ S   +M  + L+P    +  ++   C   N  +A  +    + +G   N + 
Sbjct: 308 ETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVI 367

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           +S ++    + G   EV+ ++ E +   +     AY  L  +LC+ GK+++A      +K
Sbjct: 368 FSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELK 427

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           S  L   +  Y +L+  +  +G   +A  L +EM   G KP  
Sbjct: 428 SMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDV 470



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 64/279 (22%)

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN------------------AGLKPY 197
           + GFS N   YT+ I   C Y    + + L  ++ +                   G+   
Sbjct: 88  QHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLFDSLFEGVNDV 147

Query: 198 DE------TFNLLIEGCAKAKRIEESLSYCEQMMSRK---LLPSCSAFNEMIRRLCECGN 248
           +E       FN  ++ C       E++ +  Q  +RK   +LP+  +FN +I RL +   
Sbjct: 148 NEDHYLFNAFNGFVKACVSQNMFVEAIDFLLQ--TRKNVVILPNILSFNFLINRLVKHDE 205

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-------------- 294
              A  +       G   NE TY+ +I    K+G+ + V++++ EM              
Sbjct: 206 VDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYAT 265

Query: 295 -------------------EYKSISPTLP--AYTSLISSLCQCGKLEEADKYFKIMKSHS 333
                              +Y++ +  +   AYT++I   C   KL+EA+  F  M+   
Sbjct: 266 FIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQG 325

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LVP V +Y +LV  +    N  KAL + + M+S G+K +
Sbjct: 326 LVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTN 364


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 173/372 (46%), Gaps = 20/372 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +++FN+L+  +   +R    + ++++M +    PN  +  TL+  LCK G+L     + 
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  K C P ++  TS +  + +  R+ E     ++M+ K    D +A+S ++    K 
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262

Query: 142 RN-----------------LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
            +                 L+ A   +EEM+ R    ++ ++ T I A C+  ++ +   
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322

Query: 185 LMQEMENAG---LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           L Q M++       P  ET+N++++   KAK+++E+     +M +  L P    ++ ++ 
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G   +A  +L     +G  P+  T + ++   +K G++   L     M+ +  +P
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            L  Y +L+  LC+ G+++EA  +   M +    P V  Y  ++      G  A A  + 
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502

Query: 362 EEMVSEGLKPST 373
           +EMV  G+ P T
Sbjct: 503 QEMVKRGVLPDT 514



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 172/379 (45%), Gaps = 21/379 (5%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q+G+  S+ ++N  +  + K++   L +  +Q M      P++ T   ++  LCK G+L 
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-MIHDTIAYSLI 134
              ++L ++        VI  + +I    +  R+++ + + K M      + D + ++ +
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +        +  A V++E M K G   N   Y+T +   C+ G+++EA  L +EM     
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA-- 252
            P    +   + G  KA R+ E+   C +M+++       AF+ +I  LC+ G+A++A  
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270

Query: 253 --------NGMLTLA-------LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
                   +GML  A       + +   P+   ++ LI    K   + + + L+  M+  
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 298 S---ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                 P L  Y  ++ +LC+  +L+EA +    M ++ L P V  Y +LV    + G  
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390

Query: 355 AKALHLCEEMVSEGLKPST 373
            +A  L EEM  EG+ P +
Sbjct: 391 DRACDLLEEMSKEGVFPDS 409



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 169/377 (44%), Gaps = 23/377 (6%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTK-----------------SDRNDLVWRIYQHM 49
           A D CR +  +G     ++F+T+I ++ K                 S   D   + ++ M
Sbjct: 233 ACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEM 292

Query: 50  LENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR---CSPMVIVNTSLILRIIQE 106
           +     P+     TLI A+CK  +L   V +  R+   +   C P +     ++  + + 
Sbjct: 293 ISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKA 352

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           ++++E   L+  M    +  D + YS +V    K+  L+ A  + EEM K G   +SF  
Sbjct: 353 KQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
            + + A  + GK++ A   ++ M+  G  P   T+N L++G  KA RI+E++++  +M++
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            K  P   ++  +I  LC  G A  A+ +    + +G  P+ + Y  L+ G A+ G    
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            L+L   ++     P    +  ++  LC+ GK E+A +  + M           Y S+V 
Sbjct: 533 ALEL---LKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVS 589

Query: 347 IHLEKGNKAKALHLCEE 363
              + G   KA  L ++
Sbjct: 590 GLRKLGKVDKARQLVDD 606


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 162/349 (46%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++NT++  + K  +   V  +   M  +  +PN  T   L+   CK   L+   ++++ 
Sbjct: 247 VTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIEL 306

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + GK   P V    +++  +  E +I+E + L  +M    ++ D + Y+ ++    + R 
Sbjct: 307 MTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRG 366

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            ++A  + EEM  RG   N   +   I  +C  GKI+EA+ +M +M  +G  P   T+N 
Sbjct: 367 SDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNT 426

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I G  KA ++ E+    ++M  + L       N ++  +C       A  +   A  +G
Sbjct: 427 MINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRG 486

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           +  +E+TY  LI GY K+ +    LKL+ EM+   I  T+  Y ++I  LC  GK ++A 
Sbjct: 487 YILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAV 546

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                +    LVP       ++  +  +G   KA     +MV   LKP 
Sbjct: 547 DKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPD 595



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 19  FSLSLISFNTLIHVVTKSDR-NDLVW--RIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           F  +L++ NTL++ + +S+  + LV+   ++Q  ++    PN  T   LI   C     +
Sbjct: 169 FRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTE 228

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +++++    C P  +   +++  + +  ++ +   LL +M    +  +   Y+++V
Sbjct: 229 EALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILV 288

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +   K++ L+ A  V E M  +G   + + Y T +   C+ GKI+EA  L  +ME+  L 
Sbjct: 289 HGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLV 348

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI+GC + +  + +    E+M +R +  +    N MI+  C  G   +A+ +
Sbjct: 349 PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNV 408

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   ++ GFSP+  TY+ +I GY K G++ E  K+  EM  K +        +L+ ++C 
Sbjct: 409 MVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCL 468

Query: 316 CGKLEEADKYFKIMKSHSLVPGVD--IYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             +L++A  Y   MK+      +D   Y +L+  + +     +AL L EEM   G+
Sbjct: 469 EKQLDDA--YTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGI 522



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 150/320 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + AF +   ++ RG   + ++ N +I       + D    +   M+E+   P+  T  T+
Sbjct: 368 DAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTM 427

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+  CK G++     M+D +  K          +L+  +  E+++++   L  +  ++  
Sbjct: 428 INGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGY 487

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I D + Y  ++    K    + AL ++EEM + G  A    Y T I   C  GK ++A  
Sbjct: 488 ILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVD 547

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            + E+   GL P + T N++I G      +E++  +  +M+   L P     N ++R LC
Sbjct: 548 KLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLC 607

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  ++   +    + KG   + +TY+ +I  + KE  +++   L  EME K++ P   
Sbjct: 608 REGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRY 667

Query: 305 AYTSLISSLCQCGKLEEADK 324
            Y ++++ L + G+ EEA+K
Sbjct: 668 TYNAIVTGLTKAGRTEEAEK 687



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%)

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + Q+    G++P   TFN+LI G       EE+L    QM      P    +N ++  LC
Sbjct: 198 VFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALC 257

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     Q   +L    + G  PN  TY+ L+ GY K   ++E  ++   M  K + P + 
Sbjct: 258 KRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVW 317

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +++  LC  GK++EA +    M+S  LVP V  Y +L+    E      A  L EEM
Sbjct: 318 TYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEM 377

Query: 365 VSEGLK 370
            + G+K
Sbjct: 378 KARGVK 383



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 133/321 (41%), Gaps = 39/321 (12%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV- 149
           P  +++TSL   +I ++    G  +  +M R     + +  + ++ A V+  +  S +  
Sbjct: 137 PKPLLDTSLAAYVISKQP-HLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFS 195

Query: 150 --VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             V+++ +K G   N   +   I  YC     EEA  L+ +M   G  P + T+N ++  
Sbjct: 196 REVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTA 255

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K  ++ +      QM +  L P+ + +N ++   C+    K+A  ++ L   KG  P+
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPD 315

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS--------------- 312
             TY+ ++ G   EG+I E ++L  +ME   + P +  Y +LI                 
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVE 375

Query: 313 --------------------LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
                                C  GK++EA      M      P    Y +++  + + G
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435

Query: 353 NKAKALHLCEEMVSEGLKPST 373
             A+A  + +EM  +GLK  T
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDT 456



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 24/307 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +     +RG+ L  +++ TLI    K ++ D   ++++ M E        T  T+I 
Sbjct: 475 AYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIR 534

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G+    VD L+ +  K   P    +  +I     E  +E+      +M+  ++  
Sbjct: 535 GLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKP 594

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D    ++++    +   LE  L ++   + +G   ++  Y   I ++C+  ++E+A  LM
Sbjct: 595 DIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLM 654

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EME   L+P   T+N ++ G  KA R EE+     + ++ K                  
Sbjct: 655 TEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA-----EKLALKF----------------- 692

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
             A++   + T         +++ YS  I     +G+ ++ +KL+ + E K +S     Y
Sbjct: 693 --AEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTY 750

Query: 307 TSLISSL 313
             L+  L
Sbjct: 751 IKLMDGL 757



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 24/274 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +   +++ G   ++I++NT+I  +  S + D        +LE    P+E+T   +I 
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G ++      +++      P +     L+  + +E  +E+G+ L    + K    
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPM 629

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT+ Y++I+ +  K R LE A  +  EM  +    + + Y   +    + G+ EEA    
Sbjct: 630 DTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAE--- 686

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
                           L ++   K ++++       Q  S +L  S   ++E I  LC  
Sbjct: 687 ---------------KLALKFAEKGQQVK------TQDTSPELGTSDMMYSEQISSLCTQ 725

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
           G  K A  +   A  KG S N+ TY  L+ G  K
Sbjct: 726 GKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 173/372 (46%), Gaps = 20/372 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +++FN+L+  +   +R    + ++++M +    PN  +  TL+  LCK G+L     + 
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  K C P ++  TS +  + +  R+ E     ++M+ K    D +A+S ++    K 
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262

Query: 142 RN-----------------LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
            +                 L+ A   +EEM+ R    ++ ++ T I A C+  ++ +   
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322

Query: 185 LMQEMENAG---LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           L Q M++       P  ET+N++++   KAK+++E+     +M +  L P    ++ ++ 
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G   +A  +L     +G  P+  T + ++   +K G++   L     M+ +  +P
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            L  Y +L+  LC+ G+++EA  +   M +    P V  Y  ++      G  A A  + 
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502

Query: 362 EEMVSEGLKPST 373
           +EMV  G+ P T
Sbjct: 503 QEMVKRGVLPDT 514



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 172/379 (45%), Gaps = 21/379 (5%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q+G+  S+ ++N  +  + K++   L +  +Q M      P++ T   ++  LCK G+L 
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKNMIHDTIAYSLI 134
              ++L ++        VI  + +I    +  R+++ + + K M      + D + ++ +
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +        +  A V++E M K G   N   Y+T +   C+ G+++EA  L +EM     
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA-- 252
            P    +   + G  KA R+ E+   C +M+++       AF+ +I  LC+ G+A++A  
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270

Query: 253 --------NGMLTLA-------LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
                   +GML  A       + +   P+   ++ LI    K   + + + L+  M+  
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 298 S---ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
                 P L  Y  ++ +LC+  +L+EA +    M ++ L P V  Y +LV    + G  
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKL 390

Query: 355 AKALHLCEEMVSEGLKPST 373
            +A  L EEM  EG+ P +
Sbjct: 391 DRACDLLEEMSKEGVFPDS 409



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 171/374 (45%), Gaps = 25/374 (6%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTK-----------------SDRNDLVWRIYQHM 49
           A D CR +  +G     ++F+T+I ++ K                 S   D   + ++ M
Sbjct: 233 ACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEM 292

Query: 50  LENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR---CSPMVIVNTSLILRIIQE 106
           +     P+     TLI A+CK  +L   V +  R+   +   C P +     ++  + + 
Sbjct: 293 ISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKA 352

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           ++++E   L+  M    +  D + YS +V    K+  L+ A  + EEM K G   +SF  
Sbjct: 353 KQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
            + + A  + GK++ A   ++ M+  G  P   T+N L++G  KA RI+E++++  +M++
Sbjct: 413 ASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVA 472

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            K  P   ++  +I  LC  G A  A+ +    + +G  P+ + Y  L+ G A+ G    
Sbjct: 473 AKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDL 532

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV- 345
            L+L   ++     P    +  ++  LC+ GK E+A +  + M           Y ++V 
Sbjct: 533 ALEL---LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVR 589

Query: 346 GIH-LEKGNKAKAL 358
           G+  L K +KA+ L
Sbjct: 590 GLRKLGKVDKARQL 603


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 174/365 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A ++ R  + +     ++ +NT+I  + K    +  + +Y   +    +P+  T   L
Sbjct: 315 KAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNAL 374

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS  C  G+L+  +D+ +++  K   P V   + L+    ++  I+E   +L  M+++++
Sbjct: 375 ISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSI 434

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + YS ++     +  +  A  ++  M  RG +AN   Y   I  +C+   ++EA  
Sbjct: 435 KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMK 494

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM +  + P   T++ LI+G  K+ RI  +L   ++M  R   P    +N ++  LC
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALC 554

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  +  +A  +LT    +G  P+  TY+ L+ G  + G++++  K++ ++  K  +  + 
Sbjct: 555 KKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVY 614

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AYT +I   C  G  +EA      M+ +  +P    YE ++    EK     A  L  EM
Sbjct: 615 AYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674

Query: 365 VSEGL 369
           +  GL
Sbjct: 675 IMRGL 679



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 170/359 (47%), Gaps = 8/359 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF L  +S+ TLI+ + K         + +     +  P+     T+I  +CK   +   
Sbjct: 293 GFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDA 352

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+      KR  P V    +LI       ++++ + L  +M  KN+I D   +S++V  
Sbjct: 353 FDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDG 412

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  N++ A  V   M+K+    +   Y++ +  YC   ++ +A  +   M + G+   
Sbjct: 413 FCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTAN 472

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            +++N++I G  K K ++E++   ++M  +++ P    ++ +I  LC+ G    A  ++ 
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVD 532

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +G  P+ ITY+ ++    K+  + + + L  +++ + I P +  YT L+  LCQ G
Sbjct: 533 EMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSG 592

Query: 318 KLEEADKYFKIMKSHSLVPG--VDIYESLVGIH--LEKGNKAKALHLCEEMVSEGLKPS 372
           KLE+A K F+ +    LV G  +D+Y   V I    +KG   +AL L  +M   G  P 
Sbjct: 593 KLEDARKVFEDL----LVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 647



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 152/324 (46%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +L+N   P+  T+ T I   C  GQ+   +   D++         +   +LI  + +   
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
            +  + LL+R   K +  D + Y+ I+    K +++  A  +Y E + +    + F Y  
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C  GK+++A  L  +M +  + P   TF++L++G  K   I+E+ +    MM + 
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS 433

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           + P    ++ ++   C      +A  +      +G + N  +Y+ +I G+ K   + E +
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           KL+ EM +K I P +  Y+SLI  LC+ G++  A +    M      P +  Y S++   
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            +K +  KA+ L  ++  +G++P 
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPD 577



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 35/290 (12%)

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           ++L+     DTI  +  +        +  AL  +++++  GF  +   Y T I   C+ G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           + + A  L++  +   ++P    +N +I+G  K K + ++     + +S+++ P    +N
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I   C  G  K A  +      K   P+  T+S L+ G+ K+G I+E   +   M  +
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 298 SISPTLPAYTSL-----------------------------------ISSLCQCGKLEEA 322
           SI P +  Y+SL                                   I+  C+   ++EA
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            K FK M    + P V  Y SL+    + G  + AL L +EM   G +P 
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPD 542



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 113/217 (52%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG + ++ S+N +I+   K    D   ++++ M     +P+  T  +LI  LCK G+
Sbjct: 464 MSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGR 523

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   ++++D +H +   P +I   S++  + ++  +++ + LL ++  + +  D   Y++
Sbjct: 524 ISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTI 583

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    +   LE A  V+E++L +G++ + + YT  I  +C+ G  +EA  L+ +ME  G
Sbjct: 584 LVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             P  +T+ ++I    +    + +     +M+ R LL
Sbjct: 644 CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 160/329 (48%), Gaps = 3/329 (0%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FDV   +  RG+  ++ S++ +I  + +  +   V ++ +HM      P+     T++  
Sbjct: 184 FDV---MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDR 240

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK   +   V +  ++ G    P V+  TSLI  +    R +E   LL  M   N++ D
Sbjct: 241 LCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD 300

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            +A+S+++    K   +  A V+ + M + G   +   Y T +  YC   ++ EA  + +
Sbjct: 301 LVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFE 360

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            M + G  P   +F++L+ G  KAKRI+E+    ++M  R L+P   ++N +I  LC+  
Sbjct: 361 VMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQAR 420

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +A  +       G+ PN +TYS L+   +K+G + + + L+  ME   + P L  Y 
Sbjct: 421 RPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYN 480

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            +I  +C+ GK ++A + F  +    L P
Sbjct: 481 IMIDGMCKYGKFKDARELFAELSVKGLQP 509



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 171/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ ++    + + +E  G S  ++S   LI+   +    D  + +   +++    PN  T
Sbjct: 104 MKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVIT 163

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI+  C  G++   +++ D +  +   P V   + +I  + +  +  E + LL+ M 
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMK 223

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 D + Y+ IV    K R +  A+ ++ +M   G       YT+ I      G+ +
Sbjct: 224 VVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK 283

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L+ EM+   + P    F++LI+   K   + E+    + M    + P  + +N ++
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C      +A  +  + + KG  P+  ++S L+ GY K   I E  +L+ EM ++ + 
Sbjct: 344 NGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI 403

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P   +Y +LIS LCQ  +  EA++ FK M S+   P +  Y  L+    ++G   +A+ L
Sbjct: 404 PDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGL 463

Query: 361 CEEMVSEGLKPS 372
              M + GLKP 
Sbjct: 464 FRAMENSGLKPD 475



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/383 (20%), Positives = 176/383 (45%), Gaps = 4/383 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +  F V   + + G   ++I+F+TLI+      +      ++  M+     PN  +   +
Sbjct: 143 DYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSII 202

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC+ G+    + +L+ +    C P V++  +++ R+ ++  + E + +  +M    +
Sbjct: 203 IKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGI 262

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           +   + Y+ +++    +   + A  +  EM       +   ++  I   C+ G++ EA  
Sbjct: 263 LPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARV 322

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ M   G++P   T+N L+ G      + E+    E M+S+  +P   +F+ ++   C
Sbjct: 323 ILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYC 382

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  +      +G  P+ ++Y+ LI G  +     E  +L+ +M      P L 
Sbjct: 383 KAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLV 442

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+ L+  L + G L++A   F+ M++  L P +  Y  ++    + G    A  L  E+
Sbjct: 443 TYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL 502

Query: 365 VSEGLKPSTSYLCSAS---TCRG 384
             +GL+P+ +++C+ +    C+G
Sbjct: 503 SVKGLQPN-NWVCTPTIDGVCKG 524



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 147/328 (44%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           + HM+     P+      L SAL +    +T V +  ++     S  V+  T LI    +
Sbjct: 79  FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
              ++ G  +L ++++  +  + I +S ++        +  A+ +++ M+ RG+  N   
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y+  I   C  GK  E   L++ M+  G +P    +N +++   K + + E++    +M 
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              +LP+   +  +I  L   G  K+A G+L         P+ + +S LI    KEGE+ 
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVS 318

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E   +   M    + P +  Y +L++  C   ++ EA K F++M S   +P V  +  LV
Sbjct: 319 EARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILV 378

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + +     +A  L +EM   GL P T
Sbjct: 379 NGYCKAKRIDEAKQLFDEMTHRGLIPDT 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 140/336 (41%), Gaps = 35/336 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A  +   ++  G   +++++ +LIH +    R    + +   M      P+    
Sbjct: 245 RLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAF 304

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI  +CK G+                                   + E  V+LK M  
Sbjct: 305 SVLIDIMCKEGE-----------------------------------VSEARVILKTMTE 329

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  D   Y+ ++        +  A  V+E M+ +G   + F ++  +  YC+  +I+E
Sbjct: 330 MGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDE 389

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L  EM + GL P   ++N LI G  +A+R  E+    + M S    P+   ++ ++ 
Sbjct: 390 AKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLD 449

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L + G   QA G+     + G  P+ +TY+ +I G  K G+ ++  +L+ E+  K + P
Sbjct: 450 CLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQP 509

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
                T  I  +C+ G L+EA K F+ M+     P 
Sbjct: 510 NNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPA 545



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 127/266 (47%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I + +     M+  N +   + +  +  A V+M++ ++ + + ++M   G S +    T 
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C    ++    ++ ++   GL+P   TF+ LI G     +I  ++   + M++R 
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+  +++ +I+ LC  G   +   +L      G  P+ + Y+ ++    K+  + E +
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            ++ +M+   I PT+  YTSLI  L   G+ +EA      MK  +++P +  +  L+ I 
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTS 374
            ++G  ++A  + + M   G++P  +
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVA 337



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 83/198 (41%)

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +  I +A      M N    P    F  L     + K  +  +S  +QM    +     +
Sbjct: 69  FRNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLS 128

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
              +I   C   +      +L   +  G  PN IT+S LI G+  EG+I   ++L+  M 
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            +   P + +Y+ +I  LC+ GK  E  K  + MK     P V IY ++V    +     
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 356 KALHLCEEMVSEGLKPST 373
           +A+H+  +M   G+ P+ 
Sbjct: 249 EAVHIFCKMKGTGILPTV 266



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 81/194 (41%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           ++++ M+   R P+  +   L++  CK  ++     + D +  +   P  +   +LI  +
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            Q  R  E   L K M       + + YS+++    K   L+ A+ ++  M   G   + 
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y   I   C+YGK ++A  L  E+   GL+P +      I+G  K   ++E+     Q
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536

Query: 224 MMSRKLLPSCSAFN 237
           M      P+    N
Sbjct: 537 MEKDDCSPAQGCIN 550


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 149/319 (46%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           A    L+   C+ G +     + D +     +P  +  T+LI         E G  L   
Sbjct: 39  AACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAE 98

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M R  +  +   Y+ ++    +    +SA ++++EM  +G   N   Y   I   C + K
Sbjct: 99  MRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSK 158

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +++A  L + M   G++P   TFNLLI+G  KA ++  +L +  QM +  L PS   +NE
Sbjct: 159 LKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNE 218

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C   +  +A        ++G +P ++TY+ LI  +AKE E+     +  EME   
Sbjct: 219 LICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAG 278

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +   + +Y  L+ +LC  GK+  A K F+ M    + P   +Y+ ++  +  +G+  KAL
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKAL 338

Query: 359 HLCEEMVSEGLKPSTSYLC 377
            L  EM   GL P+ +  C
Sbjct: 339 RLIMEMRKNGLIPNVASYC 357



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 139/327 (42%), Gaps = 3/327 (0%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FDV   + + G + + +++  LI+        ++ + ++  M  +   PN  T   LI  
Sbjct: 61  FDV---MPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGE 117

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            C+ G+ ++   + D +  K     V+    LI  + +  ++++ + L + M R+ +   
Sbjct: 118 WCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPS 177

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + ++L++    K   + +AL  + +M   G   +   Y   I  +C    I  A     
Sbjct: 178 IVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFL 237

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M+  GL P   T+ +LI   AK   ++ +     +M    L     ++  ++  LC  G
Sbjct: 238 DMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEG 297

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               A  +      KG  PN + Y  +I GY +EG   + L+L  EM    + P + +Y 
Sbjct: 298 KMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYC 357

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSL 334
             I  LC  GK +EA+     M+   L
Sbjct: 358 LTIRLLCNEGKCQEAEALIDDMEHAGL 384



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 115/265 (43%), Gaps = 2/265 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATIRTLISALCKGGQLQ 75
           +G   +++S+N LI  + +  +     ++++ M  E IR P+  T   LI    K G++ 
Sbjct: 137 KGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIR-PSIVTFNLLIDGYGKAGKMA 195

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +   +++      P V+    LI    +   I   +     M  + +    + Y++++
Sbjct: 196 NALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILI 255

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A  K   ++ A ++  EM K G   +   Y   + A C  GK+  A  L Q M+  G+K
Sbjct: 256 AAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVK 315

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    ++++I G  +     ++L    +M    L+P+ +++   IR LC  G  ++A  +
Sbjct: 316 PNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEAL 375

Query: 256 LTLALDKGFSPNEITYSHLIGGYAK 280
           +      G   +E     L+   A+
Sbjct: 376 IDDMEHAGLQTSETICRILLDAKAR 400


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 183/376 (48%), Gaps = 3/376 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R  E +    S++SFN+++    K    D+    +  +L+    P+  +   LI+ LC  
Sbjct: 230 RTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 289

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +   +++   ++     P  +    L+        I     +++ ML K +  D I Y
Sbjct: 290 GSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITY 349

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV-YTTFIGAYCEYGKIEEANCLMQEME 190
           ++++  + ++ N++  L++ ++ML RGF   S + Y+  +   C+ G+++EA  L  ++E
Sbjct: 350 TILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLE 409

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             GL P    ++++I G  K  + + ++   ++M  +++LP+      ++  LC+ G   
Sbjct: 410 AYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLL 469

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L   +  G + + I Y+ +I GYAK G I+E L+L+       I+P +  + SLI
Sbjct: 470 EARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLI 529

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+   + EA K   ++K + LVP V  Y +L+  +   G+      L  EM +EG+ 
Sbjct: 530 YGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIP 589

Query: 371 PS--TSYLCSASTCRG 384
           P+  T  +     CRG
Sbjct: 590 PTNVTYSVIFKGLCRG 605



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 167/359 (46%), Gaps = 23/359 (6%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE  G +  L++++ +IH + K  + D+  R+Y  M      PN  T+  ++  LC+ G 
Sbjct: 408 LEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGM 467

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     +LD +     +  +I+   +I    +   IEE + L K  +   +  +   ++ 
Sbjct: 468 LLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNS 527

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++Y   K +N+  A  + + +   G   +   YTT + AY   G I+    L +EM+  G
Sbjct: 528 LIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEG 587

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P + T++++ +G  +  ++E     C Q++  ++L     FN ++R +          
Sbjct: 588 IPPTNVTYSVIFKGLCRGWKLEN----CNQVLRERIL---EKFNHVLRDMES-------- 632

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                   +G +P++ITY+ +I    +   +    +L+ +M+ +++ PT   Y  LI SL
Sbjct: 633 --------EGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSL 684

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G + +AD++   ++  ++      Y +++  H  KG+   A+ L  +++  G   S
Sbjct: 685 CIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVS 743



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 163/343 (47%), Gaps = 13/343 (3%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR-I 103
           + Q ML+    P+  T   L+   C+ G +   + +L  +  +      I+  S++L  +
Sbjct: 333 VIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGL 392

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +  R++E + L   +    +  D +AYS++++   K+   + A+ VY+EM  +    NS
Sbjct: 393 CKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNS 452

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
                 +   C+ G + EA  L+  + ++G       +N++I+G AK+  IEE+L   + 
Sbjct: 453 RTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKV 512

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
            +   + P+ + FN +I   C+  N  +A  +L +    G  P+ ++Y+ L+  YA  G 
Sbjct: 513 AIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGS 572

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK------------YFKIMKS 331
           I+ + +L  EM+ + I PT   Y+ +   LC+  KLE  ++              + M+S
Sbjct: 573 IKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMES 632

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             + P    Y +++       + ++A  L ++M S+ L P+++
Sbjct: 633 EGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSA 675



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 127/272 (46%), Gaps = 22/272 (8%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           ++E + +LK+M  +N+   T +Y+ ++Y     R  +    VY+E+  +    N   Y+T
Sbjct: 159 VDESLYILKKMKDRNLNVSTQSYNSVLY---NFRETDKMWDVYKEIKDK----NEHTYST 211

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +   C   K+E+A   ++  E   + P   +FN ++    K   ++ + S+   ++   
Sbjct: 212 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCG 271

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGFSPNEITYSHLIGGYAKEGEIQ 285
           L+PS  + N +I  LC  G+  +A   L LA D    G  P+ +TY+ L+ G+   G I 
Sbjct: 272 LVPSVYSHNILINGLCLVGSIAEA---LELASDMNKHGVEPDSVTYNILVKGFHLLGMIS 328

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH-----SLVPGVDI 340
              ++  +M  K +SP +  YT L+   CQ G ++      K M S      S++P    
Sbjct: 329 GAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIP---- 384

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           Y  ++    + G   +AL L  ++ + GL P 
Sbjct: 385 YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPD 416



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 12/307 (3%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +L +I +N +I    KS   +    +++  +E+   PN AT  +LI   CK   +   
Sbjct: 482 GDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEA 541

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +LD I      P V+  T+L+        I+    L + M  + +    + YS+I   
Sbjct: 542 RKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKG 601

Query: 138 ------------KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
                        ++ R LE    V  +M   G + +   Y T I   C    +  A  L
Sbjct: 602 LCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFEL 661

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            ++M++  L P   T+N+LI+       I ++  +   +  R +  S  A+  +I+  C 
Sbjct: 662 FKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCV 721

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+ + A  +    LD+GF+ +   YS +I    +     E    +  M  + ISP L  
Sbjct: 722 KGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDI 781

Query: 306 YTSLISS 312
              +I S
Sbjct: 782 CEVMIKS 788



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 96/188 (51%), Gaps = 12/188 (6%)

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            ++ E+ GL      +++L+   ++ + ++ESL   ++M  R L  S  ++N ++     
Sbjct: 136 FRKWESTGL-----VWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLY---- 186

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
             N ++ + M  +  +     NE TYS ++ G  ++ ++++ +      E+K I P++ +
Sbjct: 187 --NFRETDKMWDVYKEIK-DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 243

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           + S++SS C+ G ++ A  +F  +    LVP V  +  L+      G+ A+AL L  +M 
Sbjct: 244 FNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 303

Query: 366 SEGLKPST 373
             G++P +
Sbjct: 304 KHGVEPDS 311


>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 184/403 (45%), Gaps = 43/403 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F + + ++  G + + + +NTL+H +    RN  V R    M E +  PNE T   LIS
Sbjct: 196 GFKLLQLIKNNGVTPNTVIYNTLLHALC---RNGKVGRARSLMNEMVD-PNEVTFNILIS 251

Query: 67  A-----------------------------------LCKGGQLQTYVDMLDRIHGKRCSP 91
           +                                   LC  G++    ++L+R+     S 
Sbjct: 252 SYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSL 311

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
             +   +LI       +++ G+  LK+M  K  + +   Y++++Y   + R L+ AL ++
Sbjct: 312 DAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLF 371

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--GLKPYDETFNLLIEGCA 209
            +M   G + N   + T I   C  G+IE+   +++ ME    G K +   +N +I G  
Sbjct: 372 NDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLF 431

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  R +E+  +  +M   KL P     +  I + C+ G  + A  +    +D+G  P+ +
Sbjct: 432 KQNRFDEASEFLAKM--GKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSIL 489

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+ L+ G+++ G I+E ++L  EM   +  P    + ++I+  C+ GK+E A K+ + +
Sbjct: 490 VYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDI 549

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +   VP  + Y  L+ +   KG+  KAL +  EMV +G+ P 
Sbjct: 550 TARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPD 592



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 160/352 (45%), Gaps = 8/352 (2%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F  L+  +  ++R    +++ Q +  N   PN     TL+ ALC+ G++     +++ +
Sbjct: 179 TFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM 238

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                 P  +    LI    +EE + + +VLL++    +++ D +  + +V        +
Sbjct: 239 ----VDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRV 294

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  V E +   G S ++  Y T I  +C  GK++     +++MEN G  P  +T+N+L
Sbjct: 295 TEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNIL 354

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD-KG 263
           I G  +++ ++ +L     M +  +  +   F+ MIR LC  G  +    +L L  + K 
Sbjct: 355 IYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKE 414

Query: 264 FSPNEIT-YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
            S   I+ Y+ +I G  K+    E  +   +M    + P     +  I   C+ G +E+A
Sbjct: 415 GSKGHISPYNSIIYGLFKQNRFDEASEFLAKM--GKLFPRAVDRSMTIIQKCKEGAIEDA 472

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              +  M     +P + +Y SLV    + G+  +A+ L  EM+S    P  S
Sbjct: 473 KNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIAS 524



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 145/328 (44%), Gaps = 5/328 (1%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI-RYPNEATIRTLISALCKGGQLQTY 77
           F+ S  ++ TLIH +    R D V ++   M  +I   P E    T++  L + G  +  
Sbjct: 67  FTHSQSTYRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRV 126

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +LD  +    +P + +  S++  +++E+         K M+   +  D   + +++  
Sbjct: 127 ITVLDLAYKFHGTPSLKIFNSILDVLVKEDIDMAREFYRKSMMESGVRGDDYTFGILMKG 186

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 +     + + +   G + N+ +Y T + A C  GK+  A  LM EM    + P 
Sbjct: 187 LCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM----VDPN 242

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           + TFN+LI    K + + ++L   E+  +  L+P      +++  LC  G   +A  +L 
Sbjct: 243 EVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLE 302

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G S + + Y+ LI G+   G+++  L    +ME K   P +  Y  LI   C+  
Sbjct: 303 RVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESR 362

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLV 345
            L+ A   F  MK+  +      +++++
Sbjct: 363 MLDLALDLFNDMKTDGINRNFVTFDTMI 390



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 129/273 (47%), Gaps = 12/273 (4%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +V     + +E +G+  ++ ++N LI+   +S   DL   ++  M  +    N  T  T+
Sbjct: 330 KVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTM 389

Query: 65  ISALCKGGQLQTYVDMLDRIHGKR------CSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           I  LC  G+++    +L+ +   +       SP      S+I  + ++ R +E    L +
Sbjct: 390 IRGLCSEGRIEDGFSILELMEETKEGSKGHISPY----NSIIYGLFKQNRFDEASEFLAK 445

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M +  +    +  S+ +  K K   +E A  +Y++M+  G   +  VY + +  + ++G 
Sbjct: 446 MGK--LFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGS 503

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           I EA  L+ EM +    P   TFN +I    +  +IE +L + E + +R  +P+   ++ 
Sbjct: 504 IREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSP 563

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
           +I  LC  G+ ++A  +    ++KG  P++  +
Sbjct: 564 LIDVLCRKGDIQKALQVFLEMVEKGILPDQCIW 596


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 172/377 (45%), Gaps = 16/377 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE AF + + + ++GF     ++  +I  + ++ + +  + ++Q M      P+  T   
Sbjct: 433 FEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTI 492

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G ++      D +    CSP V+  T+L+   ++ +++ +   +  RM+   
Sbjct: 493 LIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAA 552

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG----------------FSANSFVYT 167
              + + YS ++    K   ++ A  VYE+++                    + N   Y 
Sbjct: 553 CYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYG 612

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I   C+  K+ +A+ L+  M  AG +P    ++ LI+G  K  +I+ +     +M   
Sbjct: 613 ALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKC 672

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             LPS   +  +I R+ + G    A  +L+  L+   +PN +TY+ +I G +K GEI++ 
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKA 732

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           L L   ME K  SP +  YT+LI  L + GK + + K FK M S    P    Y  L+  
Sbjct: 733 LNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINH 792

Query: 348 HLEKGNKAKALHLCEEM 364
               G   +A  L +EM
Sbjct: 793 CCAAGLLDEAHLLLDEM 809



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 161/373 (43%), Gaps = 22/373 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ TL+    K  +     RI   M+     PN +   +L+   C  G       + 
Sbjct: 305 NVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLF 364

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL------LKRMLRKNMIHDTIAYSLIV 135
           +R+      P  +     I  I  +E +    +L       + ML  + + + +  +   
Sbjct: 365 NRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFS 424

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +   E A  + +EM+++GF  ++  YT  I   C+  K+E++  L QEM+ AG+ 
Sbjct: 425 RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN 484

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ +LI+   KA  IE++ S+ ++M S    P+   +  ++    +     QA+ +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDI 544

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM----------------EYKSI 299
               +D    PN +TYS LI G  K GEIQ+  ++Y ++                +  +I
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTI 604

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P +  Y +LI  LC+  K+ +A +    M +    P   +Y++L+    + G    A  
Sbjct: 605 APNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQE 664

Query: 360 LCEEMVSEGLKPS 372
           +   M   G  PS
Sbjct: 665 VFLRMTKCGYLPS 677



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 170/378 (44%), Gaps = 11/378 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L++ A +    L+  G+  S +++N L+ V+  + + ++ +R+ + M  +    + +TI 
Sbjct: 184 LWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIG 243

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
               ALCK G+   + D L+ +  +  +   ++ T +I  +++     E M  L RM   
Sbjct: 244 YFAQALCKVGR---WADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCN 300

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           + I + + Y  ++   +K +       +   M+  G + N  ++ + +  YC  G    A
Sbjct: 301 SCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYA 360

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE--ESLSYCEQMMSRKLLPSCSAFNEM- 239
             L   M   G  P    +N+ I      + +   E L   E++    L  SC   N++ 
Sbjct: 361 YKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASC-VLNKVN 419

Query: 240 ----IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
                R LC  G  ++A  +L   + KGF P+  TY+ +I    +  ++++   L+ EM+
Sbjct: 420 TANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMK 479

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              ++P +  YT LI S C+ G +E+A  +F  M+S    P V  Y +L+  +L+     
Sbjct: 480 RAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLI 539

Query: 356 KALHLCEEMVSEGLKPST 373
           +A  +   MV     P+ 
Sbjct: 540 QAHDIFHRMVDAACYPNA 557



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 148/354 (41%), Gaps = 44/354 (12%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LI  LCK  ++    ++LD +    C P  IV  +LI    +  +I+    +
Sbjct: 606 PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV 665

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             RM +   +     Y+ ++    K   L+ A+ V  EML    + N   YT  I    +
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSK 725

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+IE+A  L+  ME  G  P   T+  LI+G  K  + + SL   +QM S+   P+   
Sbjct: 726 VGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVT 785

Query: 236 FNEMIRRLCECGNAKQANGMLTLALD------------------KGFS------------ 265
           +  +I   C  G   +A+    L LD                  +GFS            
Sbjct: 786 YRVLINHCCAAGLLDEAH----LLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEE 841

Query: 266 -------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA---YTSLISSLCQ 315
                  P    Y  LI  ++K G ++  L+L+ E+   S S  + +   Y SLI +LC 
Sbjct: 842 MESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCL 901

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             ++EEA   +  M    +VP + ++ SLV   +E     +AL LC     EG+
Sbjct: 902 ASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGV 955



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/363 (21%), Positives = 130/363 (35%), Gaps = 9/363 (2%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q G+S +   ++ L  ++   D      R+ + + E+ R      +  L+   C+ G   
Sbjct: 127 QVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWD 186

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             ++ L R+      P  +   +L+  +    ++E G  + K M       D        
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFA 246

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A  K+     AL + E   K  F+ ++ + T  I    E     EA   +  M      
Sbjct: 247 QALCKVGRWADALNMLE---KEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCI 303

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+  L+ G  K K+          MM+    P+ S FN ++   C  G+   A  +
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQE------VLKLYYEMEYKSISPTLPAYTSL 309
                  G  P  + Y+  IG    + E+        V K+Y EM   S         + 
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
              LC  GK E+A +  K M     VP    Y  ++    +     K+  L +EM   G+
Sbjct: 424 SRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGV 483

Query: 370 KPS 372
            P 
Sbjct: 484 NPD 486



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 119/305 (39%), Gaps = 38/305 (12%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  +    +E +  L R+         + Y+ +V        +E    V +EM   G
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL-------LIEGCAKA 211
           F  +      F  A C+ G+  +A  ++++          E FNL       +I G  +A
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADALNMLEK----------EDFNLDTVLCTQMISGLMEA 284

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
               E++S+  +M     +P+   +  ++    +         ++ + + +G +PN   +
Sbjct: 285 SLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLF 344

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD------KY 325
           + L+ GY   G+     KL+  M      P   AY   I S+C   +L  A+      K 
Sbjct: 345 NSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKV 404

Query: 326 FKIMKSHSLVPG----VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS------- 374
           ++ M + S V       +    L G+    G   KA  + +EM+ +G  P TS       
Sbjct: 405 YEEMLAASCVLNKVNTANFSRCLCGV----GKFEKAFQILKEMMRKGFVPDTSTYTKVIT 460

Query: 375 YLCSA 379
           +LC A
Sbjct: 461 FLCQA 465



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 3/174 (1%)

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N+L+  C +    +E+L    ++      PS   +N +++ L   G  +    +     
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             GF  +  T  +      K G   + L +   +E +  +      T +IS L +     
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNM---LEKEDFNLDTVLCTQMISGLMEASLFN 288

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           EA  +   M+ +S +P V  Y +L+   L+K        +   M++EG  P+ S
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPS 342


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 176/373 (47%), Gaps = 13/373 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   + ++FN L++  +K  R     R+ + M      PN  +   L+  LCK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCK--- 57

Query: 74  LQTY-------VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           L+ +        DM+ R  G R +P ++  ++L+    +  ++EE   LLK ++ + +  
Sbjct: 58  LERWHEAEELVRDMISR--GGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++ +  K   L  AL + EEM++ G       + T I   C    +E A+ L+
Sbjct: 116 DALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL 175

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           Q M  +G+K    T+N L++G  KA R++E+    E+M +    P   A++  +  LC+ 
Sbjct: 176 QTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPA 305
           G    A+ +L    D    PN +TY+ ++ G  K G+I   L++  +M         +  
Sbjct: 236 GKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG 295

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y++++  LC+ G+ +EA    + M      P V  Y SLV    + G   +A+    EM 
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355

Query: 366 SEGLKPSTSYLCS 378
            EG KP+    CS
Sbjct: 356 MEGCKPNAVTYCS 368



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 181/408 (44%), Gaps = 57/408 (13%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI------RYPNEATIRTLISA 67
           +  RG   +++S+N L+  + K +R    W   + ++ ++        P+  T  TL+S 
Sbjct: 36  MAARGIQPNVVSYNGLLEGLCKLER----WHEAEELVRDMISRGGRSTPDLVTYSTLLSG 91

Query: 68  LCKGGQLQTYVDMLDRI--HGKR---------------------------------CSPM 92
            CK G+++   ++L  +   G R                                 C P 
Sbjct: 92  YCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPT 151

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           +I   +LI    +E+ +E    LL+ M    +  D + Y+ ++    K   L+ A  + E
Sbjct: 152 LITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
            M   G + +   Y++F+   C+ GK+  A+ ++++M ++   P   T+N +++G  K+ 
Sbjct: 212 RMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSG 271

Query: 213 RIEESLSYCEQMMSRKLLPSCS----AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
           +I+ +L   EQM S      C      ++ ++  LC+ G  ++A  ++      G  P+ 
Sbjct: 272 KIDTALEMMEQMASSD---GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           +TYS L+ G  K G+I+E ++   EM  +   P    Y SL+  LC CG+L EA++  + 
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEE 388

Query: 329 MKSHSLV-----PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           M S         P V  Y +L+G   + G    AL   + M S+G  P
Sbjct: 389 MSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 149/311 (47%), Gaps = 6/311 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +LI+FNTLI    +    ++   + Q M  +    +  T  TL+  LCK G+LQ  
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEA 206

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L+R+    C+P V+  +S +  + +  ++     +L++M   +   + + Y+ I+  
Sbjct: 207 EQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDG 266

Query: 138 KVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
             K   +++AL + E+M    G   N   Y+T +   C+ G+ +EA  +M+ M  AG +P
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T++ L+ G  KA +IEE++    +M      P+   +  ++  LC CG   +A  M+
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386

Query: 257 -----TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
                         P+  TY+ LIGG  K G I + LK +  M  +   P   +Y++++ 
Sbjct: 387 EEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVE 446

Query: 312 SLCQCGKLEEA 322
            L + G+  +A
Sbjct: 447 GLARSGRALQA 457



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 10/337 (2%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG     + +  ++  + KS R      + + M+     P   T  TLIS  C+   L+ 
Sbjct: 111 RGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEM 170

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L  +        V+   +L+  + +  R++E   LL+RM       D +AYS  VY
Sbjct: 171 ADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVY 230

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM---ENAG 193
              K   + +A  V E+M       N   Y T +   C+ GKI+ A  +M++M   +  G
Sbjct: 231 GLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCG 290

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L      ++ +++G  K  R +E+ S  E M      P    ++ ++  LC+ G  ++A 
Sbjct: 291 LNVVG--YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV 348

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-----ISPTLPAYTS 308
             +     +G  PN +TY  L+ G    G + E  ++  EM           P++  Y +
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNA 408

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           LI  LC+ G++++A K+F+ M+S    P    Y ++V
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIV 445


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 177/367 (48%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLI 65
           A DV   +   GF   L ++N L   + ++ + D  +++   M +  I  P+  T  TL+
Sbjct: 298 ATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLV 357

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A  K  +    +++L+ +  K     ++ +  ++  + +E ++EE +  L+ M  + + 
Sbjct: 358 DACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLT 417

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++ A  K  N+  A V+ +EM++ G   ++F   T +   C+  + EEA  L
Sbjct: 418 PDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 477

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++     G  P + ++  ++    K  + E +L   ++M+ RKL PS S +N +I+ L  
Sbjct: 478 LRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLST 537

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G   +A   L   ++ G  P++ TY+ +I  Y KEG++++  + + +M   S  P +  
Sbjct: 538 MGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVT 597

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
             +L++ LC  G+LE+A K F+          V  Y +L+    +  +   AL    +M 
Sbjct: 598 CNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADME 657

Query: 366 SEGLKPS 372
             GL+P 
Sbjct: 658 VRGLQPD 664



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 175/378 (46%), Gaps = 4/378 (1%)

Query: 1   MRLFEVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQ-HMLENIR-YPN 57
           +RL  +A  +     +RG    SL + N ++  + +S        +   H L  +R +PN
Sbjct: 149 LRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPN 208

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             T   L+   C  G L   +  L ++ G   SP  +   +L+    ++  + E   LL 
Sbjct: 209 HYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLA 268

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           RM ++ ++     Y+ +V A  ++  ++ A  V E M   GF  + + Y       C+ G
Sbjct: 269 RMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAG 328

Query: 178 KIEEANCLMQEMENAGL-KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           K++EA  L  EME  G+  P   T+N L++ C K +R  ++L+  E+M  + +  S    
Sbjct: 329 KVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTH 388

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +++ LC  G  ++A G L +  ++G +P+ ITY+ LI    K G + +   L  EM  
Sbjct: 389 NIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVR 448

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             +        +L+ +LC+  + EEA++  +       VP    Y +++  + ++     
Sbjct: 449 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEP 508

Query: 357 ALHLCEEMVSEGLKPSTS 374
           AL L +EM+   L PS S
Sbjct: 509 ALCLWDEMIKRKLTPSIS 526



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 169/363 (46%), Gaps = 1/363 (0%)

Query: 7   AFDVCRYLEQRGF-SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           AF +   +EQ G  S  ++++NTL+    K  R+     + + M E     +  T   ++
Sbjct: 333 AFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIV 392

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LC+ GQL+  +  L+ +  +  +P VI   +LI    +   + +  VL+  M+R  + 
Sbjct: 393 KGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLK 452

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            DT   + ++Y   K +  E A  +     +RGF  +   Y T + AY +  K E A CL
Sbjct: 453 MDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCL 512

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             EM    L P   T+N LI+G +   ++ E++    ++M   L+P  + +N +I   C+
Sbjct: 513 WDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCK 572

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+ ++A       ++  F P+ +T + L+ G    G +++ +KL+     K     +  
Sbjct: 573 EGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVIT 632

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI +LC+   ++ A ++F  M+   L P V  Y  L+    E G   +A  +  ++ 
Sbjct: 633 YNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLN 692

Query: 366 SEG 368
             G
Sbjct: 693 ESG 695



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 157/338 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   + ++G   SL++ N ++  + +  + +      + M E    P+  T  TLI 
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G +     ++D +             +L+  + +E+R EE   LL+   ++  + 
Sbjct: 429 ASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVP 488

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y  ++ A  K    E AL +++EM+KR  + +   Y T I      GK+ EA   +
Sbjct: 489 DEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKL 548

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            E+   GL P D T+N++I    K   +E++  +  +M+     P     N ++  LC  
Sbjct: 549 NELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLY 608

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +    ++KG   + ITY+ LI    K+ ++   L+ + +ME + + P +  Y
Sbjct: 609 GRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTY 668

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
             L+S+L + G+  EA K    +     + G   Y S+
Sbjct: 669 NVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSI 706



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 5/273 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  + S+ ++NTLI  ++   +          ++E    P++ T   +I A CK G L+
Sbjct: 518 KRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLE 577

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                 +++      P V+   +L+  +    R+E+ M L +  + K    D I Y+ ++
Sbjct: 578 KAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLI 637

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A  K  ++++AL  + +M  RG   + F Y   + A  E G+  EA  ++ ++  +G K
Sbjct: 638 QALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG-K 696

Query: 196 PYDETFNLLIEGCAKA---KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            Y   F   I+   +A    +  E  S  E + + +      ++N+ I+ LC  G  K+A
Sbjct: 697 LYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQG-DDQESYNKYIKELCIGGQLKEA 755

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
             +L   + KG S +  TY  L+ G  K  + Q
Sbjct: 756 KAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQ 788


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 174/369 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A D  R L      +++  +N +IH + K    D   ++ + M      P+  T   L
Sbjct: 307 ESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSIL 366

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK G ++  + +++ +      P ++  +SL   + ++   +  + + + +     
Sbjct: 367 IHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGY 426

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
            +D  AYS+++       +L+SA  + EEM++   + +   + + +  +C+ G    A  
Sbjct: 427 KYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALE 486

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               M   G+ P   T N++I+   +  R+EE+L+   +M ++ + P+   +N +I RLC
Sbjct: 487 FFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLC 546

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +   +++A  +  L L +   P+ + YS LI G+AK+   Q+ L LY  M    ++P + 
Sbjct: 547 KERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMV 606

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AYT LI+ LC   ++ EA   FK M  + + P    Y S++      G+  KA  L  EM
Sbjct: 607 AYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEM 666

Query: 365 VSEGLKPST 373
           +  G  P+ 
Sbjct: 667 LQRGHLPTV 675



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 189/411 (45%), Gaps = 41/411 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A DV    ++ G  LS  S N L+  + +++R + +  +++ M      PN  T  
Sbjct: 194 MLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYT 253

Query: 63  TLISALCKGGQLQTYVD------MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
            +++  CKG   +  +D      +L+ +     SP V+  ++ I  + +   +E  +  +
Sbjct: 254 IMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFV 313

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           + ++  N + +   Y+ I++   K   L+ AL V EEM   G S + + Y+  I  +C+ 
Sbjct: 314 RSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQ 373

Query: 177 GKIEEANCLMQEMENAGLKP----------------------------------YDET-F 201
           G +E+   L++EM+ + ++P                                  YD+T +
Sbjct: 374 GDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAY 433

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++LI+G      ++ +    E+M+   L P  S F  ++   C+ G    A     + L+
Sbjct: 434 SILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLE 493

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+  T + +I  + +EG ++E L L  EM+ + I P L  Y ++I+ LC+  K E 
Sbjct: 494 GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A + F +M   +++P V +Y +L+    ++ N  KAL L   M+  G+ P 
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPD 604



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 137/285 (48%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F +L+H   K          +  MLE    P+ AT   +I A C+ G+++  +++++ +
Sbjct: 467 NFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEM 526

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P +    ++I R+ +E + E  + L   ML++N++   + YS ++    K  N 
Sbjct: 527 QTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNS 586

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + AL++Y  MLK G + +   YT  I   C   ++ EA  L ++M   G+ P   ++  +
Sbjct: 587 QKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSV 646

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  +   + ++ +   +M+ R  LP+   +  ++   C+      A+ ++     KG 
Sbjct: 647 IAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGI 706

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           +P+ +TY+ LI  + + G + + L++  EM+   + P    Y  L
Sbjct: 707 TPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 6/231 (2%)

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCE--YGKIE----EANCLMQEMENAGLKPYDETFNL 203
           ++EEM   G   N F YT  +  YC+  +G+ +    +A  +++EME  G  P   T++ 
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
            I G  +   +E +L +   ++S   L +   +N +I  LC+ G   +A  +L      G
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            SP+  TYS LI G+ K+G++++ L L  EM+Y ++ P+L +Y+SL   LC+    + + 
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             F+ + +         Y  L+     +G+   A  L EEMV   L P  S
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPS 466



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 14/256 (5%)

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D + Y    Y KV +   E   ++ E    +  + +  V+   I  +     +E A 
Sbjct: 146 LLRDIVCY----YNKVNLDAFELFPILLES--PKDAARSVIVFDLLIKVFAANSMLENAV 199

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  + +  GL+    + N L++  A+A R E   S  E+M S    P+   +  M+   
Sbjct: 200 DVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFY 259

Query: 244 CECGN-------AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           C+ GN        +QA  +L      G SP  +TYS  I G  + G ++  L     +  
Sbjct: 260 CK-GNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLIS 318

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
            +    +  Y ++I  LC+ G+L+EA K  + MKS  + P V  Y  L+    ++G+  K
Sbjct: 319 ANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEK 378

Query: 357 ALHLCEEMVSEGLKPS 372
            L+L EEM    ++PS
Sbjct: 379 GLYLIEEMKYSNMEPS 394


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 167/352 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF LS IS+  LI+ V K        R+ + +      PN      +I  LCK   +  
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDE 216

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+   + GK  SP V+  + L+       ++   + LL  M+ +N+  D   Y+++V 
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   ++ A  V   M+K   + +  VY+T +  YC   ++  A  +   M   G+ P
Sbjct: 277 ALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTP 336

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               ++++I G  K KR++E+L+  E++  + ++P    +  +I  LC+ G       + 
Sbjct: 337 DVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLF 396

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              LD+G  P+ ITY++LI    K G +   + L+ +M+ ++I P +  +T L+  LC+ 
Sbjct: 397 DEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKV 456

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           G+L+ A ++F+ + +      V  Y  ++    ++G   +AL L   M   G
Sbjct: 457 GRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 170/363 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E+     +++ ++ +I  + K    D  + +Y  M+     P+  T   L+S
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVS 241

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  GQL   +D+L+ +  +  +P +   T L+  + +E +++E   +L  M++  +  
Sbjct: 242 GFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNL 301

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + YS ++     +  + +A  V+  M + G + +   Y+  I   C+  +++EA  L 
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLF 361

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E+    + P   T+  LI+   K+ RI       ++M+ R   P    +N +I  LC+ 
Sbjct: 362 EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +     D+   PN  T++ L+ G  K G ++  L+ + ++  K     +  Y
Sbjct: 422 GHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTY 481

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T +I+ LC+ G L+EA      M+ +  +     +E ++    +K    KA  L  EM++
Sbjct: 482 TVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIA 541

Query: 367 EGL 369
            GL
Sbjct: 542 RGL 544



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 156/348 (44%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN ++  +    R      +Y+ M  +   P+  T+  +I+  C  GQ+      + +I 
Sbjct: 61  FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                P  I   +L+  +  E +++E +    ++L +      I+Y +++    K+    
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A+ +   + +     N  +Y+  I   C+   ++EA  L  EM   G+ P   T+++L+
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G     ++  ++    +M+   + P    +  ++  LC+ G  K+A  +L + +    +
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN 300

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + + YS L+ GY    E+    +++Y M    ++P +  Y+ +I+ LC+  +++EA   
Sbjct: 301 LDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNL 360

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           F+ +   ++VP    Y SL+    + G  +    L +EM+  G  P  
Sbjct: 361 FEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDV 408



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 144/318 (45%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T+ TL+  LC  G+++  +   D++  +      I    LI  + +       + L
Sbjct: 126 PNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRL 185

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+R+ R ++  + + YS+I+    K   ++ A  +Y EM+ +G S +   Y+  +  +C 
Sbjct: 186 LRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCI 245

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++  A  L+ EM    + P   T+ +L++   K  +++E+ +    M+   +      
Sbjct: 246 VGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVV 305

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++ ++   C       A  +       G +P+   YS +I G  K   + E L L+ E+ 
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIH 365

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K++ P    YTSLI  LC+ G++      F  M      P V  Y +L+    + G+  
Sbjct: 366 QKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLD 425

Query: 356 KALHLCEEMVSEGLKPST 373
           +A+ L  +M  + ++P+ 
Sbjct: 426 RAIALFNKMKDQAIRPNV 443



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 112/238 (47%)

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           T  ++ I+ + V ++   +A+ +Y++M       + F     I  +C +G++  A   + 
Sbjct: 58  TFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVS 117

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           ++   G +P   T N L++G     +++E+L + ++++++    S  ++  +I  +C+ G
Sbjct: 118 KILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIG 177

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             + A  +L         PN + YS +I    K+  + E   LY EM  K ISP +  Y+
Sbjct: 178 ETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYS 237

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            L+S  C  G+L  A      M   ++ P +  Y  LV    ++G   +A ++   MV
Sbjct: 238 ILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 102/230 (44%)

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           N + A+  +  M     + ++F +   + +     +   A  L ++ME + ++P   T N
Sbjct: 38  NADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN 97

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           ++I       ++  + S   +++     P+    N +++ LC  G  K+A       L +
Sbjct: 98  IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           GF  + I+Y  LI G  K GE +  ++L   +E  SI P +  Y+ +I  LC+   ++EA
Sbjct: 158 GFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              +  M    + P V  Y  LV      G   +A+ L  EMV E + P 
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPD 267


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 172/367 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   + + G    + +FN L+H + K        R+   +L+     N  T    I 
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQ 259

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G L   + MLD +  +  +P V+   +LI  + +   + E    L +++   +  
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEP 319

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ ++    KM  L++A  + +  + +GF  + F Y + I   C+  +I+ A  L 
Sbjct: 320 DGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALF 379

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
                 GLKP    +N+LI+G  +   I ++L    +M           +N +I  LC+ 
Sbjct: 380 NAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKM 439

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    AN ++  A+ KG+ P+  T++ LI GY K+ +++  +++  +M    ++P +  Y
Sbjct: 440 GCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITY 499

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            S+++ L +  K E+  + F+ M     VP    Y  L     + G   +AL L +E+++
Sbjct: 500 NSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILN 559

Query: 367 EGLKPST 373
           +G+ P T
Sbjct: 560 KGITPDT 566



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 169/370 (45%), Gaps = 6/370 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE  GF+     +NTLI    K        +I Q  +     P+E T  +LI+ LC+  +
Sbjct: 317 LEPDGFT-----YNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDE 371

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + + +   GK   P VI+   LI  + QE  I + + ++  M       D   Y+L
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    KM  +  A  +  + + +G+  + F + T I  YC+  K+E    ++ +M + G
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N ++ G +KA + E+ +   E M+ +  +P+   +N +   LC+ G   +A 
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEAL 551

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISS 312
            ++   L+KG +P+ ++++ +I G+A  G+++   +L+  M E   +S T   Y  +I++
Sbjct: 552 DLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINA 611

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +   L   +K F  M +    P    Y  ++      GN         EM+ +G  PS
Sbjct: 612 FAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPS 671

Query: 373 TSYLCSASTC 382
            +       C
Sbjct: 672 LTTFGRVINC 681



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 164/367 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV   ++      S++S+N +++++ +S       +++  M      P+  T    I 
Sbjct: 95  AVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIK 154

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           + C+  +  + + +L+ +  + C    +   +++    +E    E   L   MLR  +  
Sbjct: 155 SFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFP 214

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   ++ +++   K   ++ +  +  ++LK+G  +N F +  FI   C  G +  A  ++
Sbjct: 215 DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSML 274

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             +   GL P   T+N LI G  K   + E+  Y  ++++  L P    +N +I   C+ 
Sbjct: 275 DSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKM 334

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A  +L  A+ KGF P+E TY  LI G  +  EI   L L+     K + PT+  Y
Sbjct: 335 GMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI  LCQ G + +A +    M  +     +  Y  ++    + G  + A +L  + ++
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454

Query: 367 EGLKPST 373
           +G  P  
Sbjct: 455 KGYVPDV 461



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 161/360 (44%), Gaps = 3/360 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQL 74
           + G +  ++++NTLI  + K + N +    Y H L N    P+  T  TLI   CK G L
Sbjct: 279 REGLTPDVVTYNTLICGLCK-NSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGML 337

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           Q    +L     K   P      SLI  + Q + I+  + L    L K +    I Y+++
Sbjct: 338 QNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNML 397

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    +   +  AL +  EM + G S++ + Y   I   C+ G + +AN LM +    G 
Sbjct: 398 IKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGY 457

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   TFN LI+G  K  ++E ++    +M S  + P    +N ++  L +    +    
Sbjct: 458 VPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLME 517

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                ++KG  PN+ITY+ L     K G++ E L L  E+  K I+P   ++ ++IS   
Sbjct: 518 TFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFA 577

Query: 315 QCGKLEEADKYFKIM-KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             G L+ A + F+ M + + +      Y  ++    EK +      L  EM + G  P T
Sbjct: 578 NNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDT 637



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 137/302 (45%)

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++Q  VD+ +R+    C P V+   +++  +++    ++   +  RM    ++ D   +
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF 149

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++ + +  + +   SAL +   M+ +G   N+  Y T +  + E     EA  L  +M  
Sbjct: 150 TIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLR 209

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   TFN L+    K   ++ES     +++ + +  +   FN  I+ LC  G    
Sbjct: 210 IGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSG 269

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ML   + +G +P+ +TY+ LI G  K   + E  K  +++    + P    Y +LI 
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+ G L+ A+K  +       VP    Y SL+    +     +AL L    + +GLKP
Sbjct: 330 GYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKP 389

Query: 372 ST 373
           + 
Sbjct: 390 TV 391



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 138/323 (42%), Gaps = 1/323 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   ++I +N LI  + +        ++   M EN    +  T   +I+ LCK G +  
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSD 444

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             ++++    K   P V    +LI    ++ ++E  + +L +M    +  D I Y+ ++ 
Sbjct: 445 ANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLN 504

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K    E  +  +E M+++G   N   Y     + C+ GK+ EA  L+ E+ N G+ P
Sbjct: 505 GLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITP 564

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQANGM 255
              +F  +I G A    ++ +     +M  + K+  + + +N MI    E  +      +
Sbjct: 565 DTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKL 624

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G +P+  TY  +I G+   G      K   EM  K   P+L  +  +I+ LC 
Sbjct: 625 FLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCV 684

Query: 316 CGKLEEADKYFKIMKSHSLVPGV 338
             ++ EA      M  + +VP V
Sbjct: 685 QHRVHEAVDIIHFMVHNGIVPEV 707



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 105/228 (46%), Gaps = 1/228 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E    +   +   G +  +I++N++++ ++K+ +N+ +   ++ M+E    PN+ T   L
Sbjct: 478 ETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNIL 537

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
             +LCK G++   +D++D I  K  +P  +   ++I        ++    L +RM  +  
Sbjct: 538 TESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYK 597

Query: 125 I-HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           + H T  Y++++ A  +  +L     ++ EM   G + +++ Y   I  +C  G  +   
Sbjct: 598 VSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGY 657

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             + EM   G  P   TF  +I       R+ E++     M+   ++P
Sbjct: 658 KFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/261 (19%), Positives = 112/261 (42%), Gaps = 6/261 (2%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMR-NLESALVVYEEML--KRGFSANSFVYTTFIGA--- 172
           M  K    D   +SL+ Y  +  +       V  E +L   R    NS +   +IGA   
Sbjct: 26  MFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGAMKS 85

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           Y   GK++EA  + + M+    +P   ++N ++    ++   +++     +M +  ++P 
Sbjct: 86  YGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPD 145

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              F   I+  C       A  +L   + +G   N + Y  ++ G+ +E    E  +L+ 
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +M    I P +  +  L+ +LC+ G+++E+++    +    +   +  +   +     KG
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265

Query: 353 NKAKALHLCEEMVSEGLKPST 373
             + A+ + + ++ EGL P  
Sbjct: 266 MLSGAMSMLDSVIREGLTPDV 286



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%)

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           E  Y   +  Y ++G++QE + ++  M++ +  P++ +Y ++++ L + G  ++A K F 
Sbjct: 76  EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFL 135

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
            MK+  +VP V  +   +           AL L   MVS+G + +    C+ 
Sbjct: 136 RMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTV 187


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 152/360 (42%), Gaps = 40/360 (11%)

Query: 48  HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE 107
           H    ++ P+         ALC+  ++     MLD +  K C P  +   +++  + + +
Sbjct: 126 HRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLD 185

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           R++E   +L  M          +Y+ IV A  +   ++    V  +M+ RG   N   YT
Sbjct: 186 RLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYT 240

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           T + A+C+ G++  A  ++  M   G  P   TF  L+ G     R+ ++L     M++ 
Sbjct: 241 TIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAE 300

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
              PS  ++N +IR LC  G+ K A+ +L      G  PN  TYS LI G++K G++   
Sbjct: 301 GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGA 360

Query: 288 LKLYYEMEYKSISPTLPAYT-----------------------------------SLISS 312
           + ++ +M      P +  YT                                   +LI S
Sbjct: 361 ISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRS 420

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC C ++  A   F  M+ H  VP    Y  L+     +GN   ALH+  EM S G++ S
Sbjct: 421 LCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELS 480



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 154/328 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N ++  + +  R   V+ +   M+     PN  T  T++ A CK G+L+    +L R+
Sbjct: 203 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 262

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C+P V+  T+L+  +  + R+ + + + + M+ +     T++Y++++     + +L
Sbjct: 263 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 322

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  +   M + G   N   Y+T I  + + G +  A  +  +M  +G KP    +  +
Sbjct: 323 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 382

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++   K     ++ S  ++M+     P+   FN +IR LC+C    +A G+       G 
Sbjct: 383 VDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGC 442

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  TY+ LI G  +EG   + L +  EM+   I  +L  Y +++S LCQ     EA  
Sbjct: 443 VPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMV 502

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +   M    + P    + +++  + ++G
Sbjct: 503 FVGKMIVQGIQPNAFTFSAIIHAYCKEG 530



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/359 (20%), Positives = 156/359 (43%), Gaps = 5/359 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G     +++ T++ V+ K DR D    +   M      P  A+   ++ ALC+  +
Sbjct: 162 MARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFR 216

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q    ++  + G+   P VI  T+++    +   +     +L RM+      + + ++ 
Sbjct: 217 MQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTA 276

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V        +  AL ++  M+  G++ ++  Y   I   C  G ++ A+ ++  ME  G
Sbjct: 277 LVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHG 336

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T++ LI+G +KA  +  ++S    M      P+   +  M+   C+     QA 
Sbjct: 337 CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAK 396

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++   L +   PN +T++ LI        +   L +++EM      P    Y  LI  L
Sbjct: 397 SLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGL 456

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + G   +A      M+SH +   +  Y ++V    +     +A+    +M+ +G++P+
Sbjct: 457 FREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 515



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 5/271 (1%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           + Q  R+     +L  M RK    D + Y+ IV    K+  L+ A  V   M     S N
Sbjct: 146 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYN 205

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           + V      A C   +++E   ++ +M   GL+P   T+  +++   KA  +  + +   
Sbjct: 206 AIVL-----ALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILA 260

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M+     P+   F  ++R L + G    A  M    + +G++P+ ++Y+ LI G    G
Sbjct: 261 RMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVG 320

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +++    +   ME     P +  Y++LI    + G L  A   +  M      P V +Y 
Sbjct: 321 DLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYT 380

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           ++V +  +K    +A  L ++M+ E   P+T
Sbjct: 381 NMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 411



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 131/311 (42%), Gaps = 45/311 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ R++   G++ S +S+N LI  +           I   M ++  +PN  T  TLI 
Sbjct: 290 ALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLID 349

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G L   + + + +    C P V+V T+++    ++    +   L+ +ML +N   
Sbjct: 350 GFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 409

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC-- 184
           +T+ ++ ++ +    R +  AL V+ EM + G   N   Y   I     +G   E NC  
Sbjct: 410 NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI-----HGLFREGNCGD 464

Query: 185 ---LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              ++ EM++ G++    T+N ++ G  + +   E++ +  +M+ + + P+   F+ +I 
Sbjct: 465 ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIH 524

Query: 242 RLCECGNAKQANGMLTLA-----------------------------------LDKGFSP 266
             C+ G  + A  ML                                      L +G  P
Sbjct: 525 AYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYP 584

Query: 267 NEITYSHLIGG 277
           N +T++ L+ G
Sbjct: 585 NTVTWNVLVRG 595


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 176/404 (43%), Gaps = 36/404 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  +   ++   F+  L+ +N  I    K  + D+ W+ +  +      P++ T  ++
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK  ++   V++ + +   +  P V    ++I+      +  E   LL+R  RK  
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I   IAY+ I+    +   +E AL + E M K   + N   Y   I   C+ G++E A  
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +   M+ AGL P   T N++I+   KA+R++E+ S    +  +   P    F  +I  L 
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A  +    LD G +PN + Y+ LI  + K G  ++  K+Y EM ++  SP L 
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV------------------- 345
              + +  + + G++E+    F+ +K+  L P V  Y  L+                   
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612

Query: 346 ---GIHLE-------------KGNKAKALHLCEEMVSEGLKPST 373
              G+HL+              G   KA  L EEM ++GL+P+ 
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 186/370 (50%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A+ +    +++G   S+I++N ++  + +  + +   RI + M  +   PN  +   
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-PNLTSYNI 416

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LCK G+L+  + + D +      P +I    +I R+ + +R++E   +   +  K 
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D++ +  ++    +   +  A ++YE+ML  G + N+ VYT+ I  + + G+ E+ +
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH 536

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM + G  P     N  ++   KA  IE+  +  E++ ++ L P   +++ +I  L
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGL 596

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G +K    +     ++G   +   Y+ +I G+ K G++ +  +L  EM+ K + PT+
Sbjct: 597 VKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS ++   V +Y SL+    + G   +A  + EE
Sbjct: 657 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEE 716

Query: 364 MVSEGLKPST 373
           ++ +GL P+T
Sbjct: 717 LMQKGLTPNT 726



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 172/351 (49%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++F +LI  + +  + +  + +Y+ ML++ + PN     +LI    K G+ +    +   
Sbjct: 482 VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKE 541

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  + CSP +++  + +  + +   IE+G  L + +  + +  D  +YS++++  VK   
Sbjct: 542 MMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGF 601

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            +    ++ EM ++G   ++  Y   I  +C+ GK+ +A  L++EM+  GL+P   T+  
Sbjct: 602 SKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGS 661

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G AK  R++E+    E+  S+ +  +   ++ +I    + G   +A  +L   + KG
Sbjct: 662 VIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKG 721

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +PN  T++ L+    K  EI E L  +  M+     P    Y+ +++ LC+  K  +A 
Sbjct: 722 LTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAF 781

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +++ M+   L P    Y +++      GN  +A  L E   S G  P ++
Sbjct: 782 VFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSA 832



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 168/387 (43%), Gaps = 35/387 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L S+N LI ++ K+   +   ++   M E   +PN  T+  +I  LCK  +L     + 
Sbjct: 410 NLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  K C+P  +   SLI  + +  ++ +  +L ++ML      + + Y+ ++    K 
Sbjct: 470 LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKC 529

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E    +Y+EM+ RG S +  +   ++    + G+IE+   L +E++  GL P   ++
Sbjct: 530 GRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSY 589

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++LI G  K    +++     +M  + L     A+N +I   C+ G   +A  +L     
Sbjct: 590 SILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT 649

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P  +TY  +I G AK   + E   L+ E + K++   +  Y+SLI    + G+++E
Sbjct: 650 KGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDE 709

Query: 322 ADKYFKIMKSHSLVPGV--------------DIYESLVGIHLEKGNKA------------ 355
           A    + +    L P                +I E+LV     K  K             
Sbjct: 710 AYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVN 769

Query: 356 ---------KALHLCEEMVSEGLKPST 373
                    KA    +EM  +GLKP+T
Sbjct: 770 GLCKVRKFNKAFVFWQEMQKQGLKPNT 796



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 163/334 (48%), Gaps = 2/334 (0%)

Query: 6   VAFDVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           VA    R++E++   L S  ++N L+ ++ ++   + + +I + M      P+  T   +
Sbjct: 114 VALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEM 173

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +++  K  +L+    +++ +   +  P     T+LI  +      +  + LL++M     
Sbjct: 174 VASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGY 233

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
                 ++ ++    +   +++AL + +EM    F+A+  +Y   I  + + GK++ A  
Sbjct: 234 EVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWK 293

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
              E+++ GL P D TF  +I    KA+R++E++   E++ S K +P   A+N MI    
Sbjct: 294 FFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYG 353

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A  +L     KG  P+ I Y+ ++    ++G+++E L++   M+  + +P L 
Sbjct: 354 SVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLT 412

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           +Y  LI  LC+ G+LE A K    MK   L P +
Sbjct: 413 SYNILIDMLCKAGELEAALKVQDSMKEAGLFPNI 446



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 145/309 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G +  + S++ LIH + K   +   ++++  M E   + +      +I   CK G+
Sbjct: 577 IKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGK 636

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L+ +  K   P V+   S+I  + + +R++E  +L +    K +  + + YS 
Sbjct: 637 VNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSS 696

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++ A ++ EE++++G + N++ +   + A  +  +I+EA    Q M+N  
Sbjct: 697 LIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLK 756

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P + T+++++ G  K ++  ++  + ++M  + L P+   +  MI  L   GN  +A 
Sbjct: 757 CPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAK 816

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G  P+   Y+ +I G +   +  +   L+ E   K           L+ +L
Sbjct: 817 DLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL 876

Query: 314 CQCGKLEEA 322
            +   LE+A
Sbjct: 877 HKADCLEQA 885



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/384 (21%), Positives = 164/384 (42%), Gaps = 7/384 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R    AF V   + +  F  +  ++ TLI  ++ +   D +  + + M E I Y  E T+
Sbjct: 181 RKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQE-IGY--EVTV 237

Query: 62  R---TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
               TLI    + G++   + +LD +     +  +++    I    +  +++        
Sbjct: 238 HLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHE 297

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           +  + ++ D + ++ ++    K   ++ A+ ++EE+         + Y T I  Y   GK
Sbjct: 298 LKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGK 357

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
             EA  L++  +  G  P    +N ++    +  ++EE+L   E M      P+ +++N 
Sbjct: 358 FNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNI 416

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  LC+ G  + A  +     + G  PN IT + +I    K   + E   ++  +++K 
Sbjct: 417 LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV 476

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            +P    + SLI  L + GK+ +A   ++ M      P   +Y SL+    + G K    
Sbjct: 477 CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGH 536

Query: 359 HLCEEMVSEGLKPSTSYLCSASTC 382
            + +EM+  G  P    L +   C
Sbjct: 537 KIYKEMMHRGCSPDLMLLNNYMDC 560



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 97/207 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++ +G   +++++ ++I  + K DR D  + +++         N     +LI 
Sbjct: 640 AYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLID 699

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +L+ +  K  +P       L+  +++ E I+E +V  + M       
Sbjct: 700 GFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPP 759

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + YS++V    K+R    A V ++EM K+G   N+  YTT I      G + EA  L 
Sbjct: 760 NEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLF 819

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKR 213
           +  +++G  P    +N +IEG + A +
Sbjct: 820 ERFKSSGGIPDSACYNAMIEGLSNANK 846



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 103/242 (42%)

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V + VK R L  A  V E M K  F      YTT IGA     + +    L+++M+  G
Sbjct: 173 MVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG 232

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +     F  LI   A+  R++ +LS  ++M S         +N  I    + G    A 
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAW 292

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                   +G  P+++T++ +IG   K   + E ++L+ E++     P + AY ++I   
Sbjct: 293 KFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGY 352

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              GK  EA    +  K    +P V  Y  ++     KG   +AL + E M  +     T
Sbjct: 353 GSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLT 412

Query: 374 SY 375
           SY
Sbjct: 413 SY 414



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 113/264 (42%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +   +H   AY+ ++    + RNLE    + EEM   GF  ++      + ++ +  K+ 
Sbjct: 125 KTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLR 184

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  +++ M     +P    +  LI   + A   +  L+   QM       +   F  +I
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                 G    A  +L       F+ + + Y+  I  + K G++    K ++E++ + + 
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLV 304

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    +TS+I  LC+  +++EA + F+ + S+  VP V  Y +++  +   G   +A  L
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364

Query: 361 CEEMVSEGLKPSTSYLCSASTCRG 384
            E    +G  PS        TC G
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLG 388


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 158/323 (48%), Gaps = 2/323 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            ++  LI   + +   D+  ++ + M  +    N     TL+  LC  G++   ++   R
Sbjct: 58  FTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF-R 116

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
              K C+P V+  T+L+  + +  + +E   +L+ M+ +    DT+ +S ++    K  +
Sbjct: 117 AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGS 176

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYDETFN 202
            E A  V E++++RG   +   + T I   C +Y  +E A+ ++  +   G  P    FN
Sbjct: 177 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 236

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           L+I G  KAK ++ +    E M+ +  +P+   F  +I  LC+     +A  +L   +  
Sbjct: 237 LVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMG 296

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G SPN +TYS +I G  K+G++ +  +L+  ME ++  P +  +  LI  LC+  ++EEA
Sbjct: 297 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 356

Query: 323 DKYFKIMKSHSLVPGVDIYESLV 345
            + +  M+     P +  Y SL+
Sbjct: 357 RQLYHRMRETGCAPDIITYNSLI 379



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 174/367 (47%), Gaps = 2/367 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  + R +  +G +   ++F+TLI  + K    +  +R+ + +++     ++A   T
Sbjct: 142 FDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFET 201

Query: 64  LISALC-KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +I  LC K   ++    +L  +  K  +P V++   +I    + + ++    LL+ M+ K
Sbjct: 202 IIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 261

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + +   +++++    K   +  A  + E+M+  G S N   Y+T I   C+ G++++A
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDA 321

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L Q ME     P   T N+LI+G  KAKRIEE+     +M      P    +N +I  
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDG 381

Query: 243 LCECGNAKQANGMLTLALDKGFS-PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           LC+     +A  +     + G S  N +TYS L  GYA  G + +  +++  +  K  SP
Sbjct: 382 LCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSP 441

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            L  YTSLI   C+  +  E  +  + M S    P V+   +++G   E  +  +A+ L 
Sbjct: 442 DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLF 501

Query: 362 EEMVSEG 368
           + M + G
Sbjct: 502 DSMAARG 508



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 180/396 (45%), Gaps = 39/396 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S ++++++T+I+ + K  + D  + ++Q M      PN  T   LI  LCK  +++  
Sbjct: 297 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 356

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM-IHDTIAYSLIVY 136
             +  R+    C+P +I   SLI  + +  +++E   L + +    +   + + YS + +
Sbjct: 357 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFH 416

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
               +  +  A  ++  ++ +GFS +   YT+ I  YC+  +  E   L++EM + G  P
Sbjct: 417 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476

Query: 197 YDET-----------------------------------FNLLIEGCAKAKRIEESLSYC 221
              T                                   +NL++EG A+A + +++L+  
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVL 536

Query: 222 EQMMS---RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           EQ++    RK  PS SA + ++  LC+ G    A  +L    ++GF+    +Y+ L+ G 
Sbjct: 537 EQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGL 596

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           ++     E  +++  M     +P +     +IS LC   K+++A +  + M      P +
Sbjct: 597 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 656

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +   +L+G + + G    A  L EEM   GL+P+ +
Sbjct: 657 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDT 692



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 165/357 (46%), Gaps = 2/357 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++  L+H + K+ + D    + + M+     P+  T  TLI  LCK G  +    +L
Sbjct: 125 DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 184

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQE-ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           + +  +          ++I R+  +   +E    +L  ++ K      + ++L++    K
Sbjct: 185 EDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCK 244

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            ++L+SA  + E M+++G   N F +T  I   C+  ++ EA  L+++M   G  P   T
Sbjct: 245 AKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVT 304

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I G  K  +++++    + M  R   P+    N +I  LC+    ++A  +     
Sbjct: 305 YSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 364

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT-LPAYTSLISSLCQCGKL 319
           + G +P+ ITY+ LI G  K  ++ E  +L+  +    +S      Y++L       G++
Sbjct: 365 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 424

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            +A + F ++      P +  Y SL+  + +     + + L EEM S+G  P  + L
Sbjct: 425 ADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 153/352 (43%), Gaps = 37/352 (10%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++ S N  + ++ + +R      ++++ +  I  PN+ T   LI      G L   + +L
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +         +V+T+L+  +    R+ E +    R + K+   D + Y+ +V+A    
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPDVMTYTALVHA---- 135

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                                           C+ GK +EA  +++EM   G  P   TF
Sbjct: 136 -------------------------------LCKAGKFDEAQGMLREMVAQGCAPDTVTF 164

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ-ANGMLTLAL 260
           + LI+G  K    E++    E ++ R +  S +AF  +I+RLC   N+ + A+ +L + +
Sbjct: 165 STLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVI 224

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KGF+P  + ++ +I G+ K  ++    KL   M  K   P +  +T LI+ LC+  ++ 
Sbjct: 225 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 284

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA +  + M      P V  Y +++    ++G    A  L + M      P+
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 336



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 129/307 (42%), Gaps = 39/307 (12%)

Query: 7   AFDVCRYLEQRGFSLS-LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           AF + + + + G S +  ++++TL H      R     RI+  +++    P+ AT  +LI
Sbjct: 391 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK  +    V++++ +  K   P V   ++++  + +    E  + L   M  +   
Sbjct: 451 LEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCT 510

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLK---RGFSANSFVYTTFIGAYCEYGKIEEA 182
            D + Y+L+V    +    + AL V E+++    R F+ +S      + + C+ GK ++A
Sbjct: 511 DDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDA 570

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN----- 237
             L+ +M   G      ++N L+ G ++ +R +E+    E M+S    P  S  N     
Sbjct: 571 KQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISW 630

Query: 238 -----------EMIRRL-------------------CECGNAKQANGMLTLALDKGFSPN 267
                      E+++R+                   C+ G A  A  +L    + G  PN
Sbjct: 631 LCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN 690

Query: 268 EITYSHL 274
           + T+  L
Sbjct: 691 DTTHDLL 697



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 1/131 (0%)

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC     ++A  +   A+ +   PN+ TY  LI G++  G++   ++L  EM+       
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              +T+L+  LC  G++ EA ++F+ M +    P V  Y +LV    + G   +A  +  
Sbjct: 92  AVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLR 150

Query: 363 EMVSEGLKPST 373
           EMV++G  P T
Sbjct: 151 EMVAQGCAPDT 161



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/203 (19%), Positives = 93/203 (45%), Gaps = 3/203 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY---PNEATI 61
           E A  +   +  RG +   + +N ++  + ++ ++D    + + +++       P+ + +
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+ +LC+ G+      +L ++  +  +  V     L+  + + +R +E   + + M+ 
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                +    ++++        ++ A  + + M K G   +     T IG YC+ G+ + 
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 674

Query: 182 ANCLMQEMENAGLKPYDETFNLL 204
           A  L++EM  AGL+P D T +LL
Sbjct: 675 ARKLLEEMTEAGLEPNDTTHDLL 697


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 178/361 (49%), Gaps = 1/361 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G    L   NT IHV+   +R D   R  + M      PN  T   LI   C   +
Sbjct: 195 MQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHR 254

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYS 132
           L+   +++  +  K CSP  I   +++  + +E+RI+E  +L+++ML+  N++ D + Y+
Sbjct: 255 LEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYN 314

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
             V+   K  + + AL    E  +R F  +   Y+  + ++C  G++++A  ++ EM + 
Sbjct: 315 TFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK 374

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P   T+  +I G  + ++++++     QM      P+  ++  ++  LC+ GN+ +A
Sbjct: 375 GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEA 434

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             M+ ++ +  + PN ITYS L+ G+ +EG+  E   L  EM  K   PT      LI S
Sbjct: 435 REMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQS 494

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LCQ  K++EA ++ +   ++     V  + +++    +K +   AL L ++M      P 
Sbjct: 495 LCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPD 554

Query: 373 T 373
            
Sbjct: 555 V 555



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 161/351 (45%), Gaps = 1/351 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQ 75
           +G S   IS+ T++  + K  R   +  + + ML++    P++ T  T +  L K G   
Sbjct: 268 KGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 327

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             ++ L     +R     +  ++++    +E R+++   ++  M  K  I D + Y+ ++
Sbjct: 328 EALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVI 387

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               + R ++ A  +  +M K G   N+  YT  +   C+ G   EA  +M   E     
Sbjct: 388 NGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWI 447

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+++L+ G  +  +  E+     +M+ +   P+    N +I+ LC+     +A   
Sbjct: 448 PNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRF 507

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   L+ G + N + ++ +I G+ ++ +++  L L  +M   +  P +  YT++I +L +
Sbjct: 508 MEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGK 567

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            G++EEA K    M     +P    Y +++  +   G     L L E+M+S
Sbjct: 568 KGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLS 618



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 141/304 (46%), Gaps = 1/304 (0%)

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G+L+  +  L  +      P + +  + I  ++   R+++ +  L+RM    +  + I
Sbjct: 181 RAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVI 240

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++     +  LE A  +  EM  +G S +   Y T +G  C+  +I+E   LM++M
Sbjct: 241 TYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKM 300

Query: 190 -ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
            +++ L P   T+N  +   +K    +E+L +  +   R+       ++ ++   C  G 
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  ++     KG  P+ +TY+ +I G  +E ++ +  K+  +M      P   +YT+
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L++ LC+ G   EA +   + +    +P    Y  L+     +G  ++A  L  EM+ +G
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480

Query: 369 LKPS 372
             P+
Sbjct: 481 FFPT 484



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 149/325 (45%), Gaps = 6/325 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEAT 60
           R  + A  + R + + G   + +S+  L++ + K+  N L  R   +M E   + PN  T
Sbjct: 394 RKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG-NSLEAREMMNMSEEXWWIPNAIT 452

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+    + G+     D++  +  K   P  +    LI  + QEE+++E    +++ L
Sbjct: 453 YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCL 512

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 + + ++ +++   +  +LE+AL + ++M       +   YTT I A  + G+IE
Sbjct: 513 NNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 572

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-SAFNEM 239
           EA  L  +M   G  P   T+  +I    +  R+E+ L   E+M+SR+    C +A+N++
Sbjct: 573 EATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ---ECRTAYNQV 629

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I +LC  GN +QA  +L   L      +  T   LI  Y  +G       +   M  +++
Sbjct: 630 IEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNL 689

Query: 300 SPTLPAYTSLISSLCQCGKLEEADK 324
            P L     +   L   GK EEADK
Sbjct: 690 IPDLKLCEKVSKKLMLEGKSEEADK 714



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 147/333 (44%), Gaps = 23/333 (6%)

Query: 58  EATIRTLISAL-----CKGGQLQT-------YVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           E  +R L+ +L     C   QLQT       +    DR    R  P+V      +L I+ 
Sbjct: 89  EGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYY---AMLEILS 145

Query: 106 EERIEEGMVLLKRMLRKNMIH---DTIAYSLIVYAKV-KMRNLESALVVYEEMLKRGFSA 161
           + ++ +G   + R++ K  I    +   Y ++ Y++  K+RN    L +   M K G   
Sbjct: 146 KTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTM---MQKAGIEP 202

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +  +  T I       ++++A   ++ M+   + P   T+N LI+G     R+E++    
Sbjct: 203 DLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELI 262

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL-DKGFSPNEITYSHLIGGYAK 280
            +M  +   P   ++  ++  LC+    K+   ++   L D    P+++TY+  +   +K
Sbjct: 263 AEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSK 322

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
            G   E L+   E E +        Y++++ S C+ G++++A +    M S   +P V  
Sbjct: 323 HGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVT 382

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           Y S++    ++    +A  +  +M   G KP+T
Sbjct: 383 YTSVINGLCQERKVDQAKKMLRQMYKHGCKPNT 415


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 167/361 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   +  ++N +I ++ K+ +     R+ + M+     P+     TLI   CK G 
Sbjct: 214 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 273

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           + +   + D +  ++ SP  I  T++I  + Q  R+ E   L   M+ K +  D + Y+ 
Sbjct: 274 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   ++ A  ++ +ML+ G + N   YT      C+ G+++ AN L+ EM   G
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+    T+N L+ G  KA  I++++   + M      P    +  ++   C+     +A+
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   LD+   P  +T++ L+ G+   G +++  KL   M  K I P    Y SLI   
Sbjct: 454 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 513

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C    +    + ++ M +  +VP  + Y  L+  H +  N  +A  L  +MV +G   + 
Sbjct: 514 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTV 573

Query: 374 S 374
           S
Sbjct: 574 S 574



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 177/356 (49%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++R  S   I++  +I  + ++ R     +++  M+     P+E T   LI   CK G+
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 343

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    + +++     +P ++  T+L   + +   ++    LL  M RK +  +   Y+ 
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K  N++ A+ + ++M   GF  ++  YTT + AYC+  ++  A+ L+++M +  
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P   TFN+L+ G   +  +E+     + M+ + ++P+ + +N +I++ C   N +   
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      KG  P+  TY+ LI G+ K   ++E   L+ +M  K  + T+ +Y +LI   
Sbjct: 524 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 583

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +  K  EA + F+ M+   LV   +IY     I+ ++G     L LC+E + + L
Sbjct: 584 YKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 639



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 162/360 (45%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +   G +   + + TLI    K       +R++  M +    P+  T   +I  LC
Sbjct: 245 VLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 304

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G++     +   +  KR  P  +  T+LI    +E +++E   L  +ML+  +  + +
Sbjct: 305 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 364

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ +     K   +++A  +  EM ++G   N + Y + +   C+ G I++A  LM++M
Sbjct: 365 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 424

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E AG  P   T+  L++   K++ +  +     QM+ R+L P+   FN ++   C  G  
Sbjct: 425 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 484

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           +    +L   L+KG  PN  TY+ LI  Y     ++   ++Y  M  K + P    Y  L
Sbjct: 485 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 544

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I   C+   ++EA    + M        V  Y +L+    ++    +A  L E+M  EGL
Sbjct: 545 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGL 604



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 141/295 (47%)

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +++ +  K   P       +IL + +  ++ E   +L+ M+ + +  D + Y+ ++    
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K+ N+ SA  +++EM KR  S +   YT  I   C+ G++ EA+ L  EM    L+P + 
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+  LI+G  K  +++E+ S   QM+   L P+   +  +   LC+CG    AN +L   
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             KG   N  TY+ L+ G  K G I + +KL  +ME     P    YT+L+ + C+  ++
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             A +  + M    L P V  +  L+      G       L + M+ +G+ P+ +
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 504



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 7/198 (3%)

Query: 182 ANCLMQEMENAGLKPYDETFNLLI-------EGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           A  L  +M N GL    ++ NL I       +G   A + E  L   E+M  + L P+  
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +I  LC+ G   +A  +L   + +G +P+ + Y+ LI G+ K G +    +L+ EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
           + + ISP    YT++I  LCQ G++ EADK F  M    L P    Y +L+  + ++G  
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 355 AKALHLCEEMVSEGLKPS 372
            +A  L  +M+  GL P+
Sbjct: 345 KEAFSLHNQMLQMGLTPN 362



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 4/233 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+  ++CR    +G  L++ ++N+L++ + K+   D   ++ + M     +P+  T  TL
Sbjct: 384 ELLHEMCR----KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + A CK  ++    ++L ++  +   P V+    L+        +E+G  LLK ML K +
Sbjct: 440 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 499

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + +   Y+ ++       N+ +   +Y  M  +G   +   Y   I  +C+   ++EA  
Sbjct: 500 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 559

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           L ++M   G      ++N LI+G  K K+  E+    EQM    L+     +N
Sbjct: 560 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 97/231 (41%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + +E  GF    +++ TL+    KS        + + ML+    P   T   L++
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G L+    +L  +  K   P      SLI +      +     + + M  K ++ 
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    K RN++ A  ++ +M+ +GF+     Y   I  + +  K  EA  L 
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 596

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++M   GL    E +N+  +      ++E +L  C++ + + L+      N
Sbjct: 597 EQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 179/354 (50%), Gaps = 8/354 (2%)

Query: 25  SFNT---LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +FNT   L+  + K   ND    ++  M  +   P+ + +  L+S+  + G+L +  + L
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL 167

Query: 82  DRIH--GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           + +H  G + SP V  N  L+  ++++  ++E ++L +  L    + D  ++++++    
Sbjct: 168 NEVHCYGIKVSPFVYNN--LLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLC 225

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE-MENAGLKPYD 198
           ++  ++ A   ++ M   G   +   Y T I  +C   +I + + L++E M   G+ P  
Sbjct: 226 RIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDV 285

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+  +I G  K   ++ +    ++M+S  + P+   FN +I    + GN + A  M   
Sbjct: 286 ITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEK 345

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L  G  P+ +T++ LI GY +EGE+ + LKL+ EM+ +++SP +  Y  LI++LC+  +
Sbjct: 346 MLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENR 405

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + EA  + + +KS  +VP   IY  ++    + G   +A  +  EM  +  +P 
Sbjct: 406 IREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 1/341 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  +S   +N L++++ K +  D    +++  LE    P+  +   LI  LC+ G++   
Sbjct: 174 GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKA 233

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR-MLRKNMIHDTIAYSLIVY 136
            +    +    C P ++   +LI    +   I +G  LLK  ML K +  D I Y+ I+ 
Sbjct: 234 FEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIIS 293

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K+ ++++A  +++EM+  G   N F +   I  + + G +  A  + ++M   G  P
Sbjct: 294 GYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLP 353

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TF  LI+G  +   + + L   E+M  R L P+   +  +I  LC+    ++A   L
Sbjct: 354 DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFL 413

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                    P    Y+ +I G+ K G++ E   +  EM+ K   P    +T LI   C  
Sbjct: 414 RHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           G++ EA   F  M   + VP      SL+   L+ G   +A
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEA 514



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 150/307 (48%), Gaps = 1/307 (0%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F   + SFN LI  + +    D  +  +Q+M     +P+  +  TLI+  C+  ++    
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269

Query: 79  DML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           D+L + +  K  SP VI  TS+I    +   ++    L   M+   +  +   +++++  
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+ N+ SA+V+YE+ML  G   +   +T+ I  YC  G++ +   L +EM+   L P 
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPN 389

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ +LI    K  RI E+ ++   + S +++P    +N +I   C+ G   +AN ++ 
Sbjct: 390 VYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVA 449

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +K   P++IT++ LI G   +G + E +  +Y+M   +  P      SLIS L + G
Sbjct: 450 EMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 509

Query: 318 KLEEADK 324
              EA +
Sbjct: 510 MPNEASQ 516



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 11/291 (3%)

Query: 95  VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL------ESAL 148
           +N S+   +I+  R  + ++ LK     +  H +I ++   Y  + MRNL      +SA 
Sbjct: 74  LNPSIAFEVIK--RFSDPLLGLK-FFEFSRTHLSINHTFNTY-DLLMRNLCKVGLNDSAK 129

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           +V++ M   G   +S +    + +Y   GK++ A   + E+   G+K     +N L+   
Sbjct: 130 IVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNML 189

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K   ++E++    + +    +P   +FN +IR LC  G   +A        + G  P+ 
Sbjct: 190 VKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDI 249

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYE-MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           ++Y+ LI G+ +  EI +   L  E M  K +SP +  YTS+IS  C+ G ++ A + F 
Sbjct: 250 VSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFD 309

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            M S  + P    +  L+    + GN   A+ + E+M+  G  P      S
Sbjct: 310 EMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 114/246 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S  +I++ ++I    K         ++  M+ +   PN+ T   LI    K G +++
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + M +++    C P V+  TSLI    +E  + +G+ L + M  +N+  +   Y++++ 
Sbjct: 339 AMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   +  A      +         F+Y   I  +C+ GK++EAN ++ EM+    +P
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP 458

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TF +LI G     R+ E++S   +M+    +P     N +I  L + G   +A+ + 
Sbjct: 459 DKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIK 518

Query: 257 TLALDK 262
             AL K
Sbjct: 519 QAALQK 524


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 174/366 (47%), Gaps = 11/366 (3%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT-L 64
           +A+   R +E  GF + +I + T+++ + K+   +        +L+ I +  ++ I T L
Sbjct: 178 LAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILK-IGFVLDSHIGTSL 236

Query: 65  ISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +   C+G  L+  + + D +  +  C+P  +  + LI  + +  R+EE   L  +M  K 
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
               T  Y++++ A      ++ A  +++EM+ RG   N   YT  I   C  GKIEEAN
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + ++M    + P   T+N LI G  K  R+  +      M  R   P+   FNE++  L
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G   +A  +L   LD G SP+ ++Y+ LI G  +EG +    KL   M    I P  
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIM--KSHSL--VPGVDIYESLVGIHLEKGNKAKALH 359
             +T++I++ C+ GK + A  +  +M  K  SL  V G  + + +  +    G    AL 
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV----GKTRDALF 532

Query: 360 LCEEMV 365
           + E +V
Sbjct: 533 ILETLV 538



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 171/363 (47%), Gaps = 3/363 (0%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FD  R  E  GF L+   +++L+  + K D   L +  Y+ M  +         RT+++A
Sbjct: 147 FDELR--EVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNA 204

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIH 126
           LCK G  +     + +I          + TSL+L   +   + + + +   M ++     
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP 264

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           ++++YS++++   ++  LE A  + ++M ++G   ++  YT  I A C+ G I++A  L 
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G KP   T+ +LI+G  +  +IEE+   C +M+  ++ PS   +N +I   C+ 
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +LT+   +   PN  T++ L+ G  + G+  + + L   M    +SP + +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI  LC+ G +  A K    M    + P    + +++    ++G    A      M+ 
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504

Query: 367 EGL 369
           +G+
Sbjct: 505 KGI 507



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 171/366 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + AF++   +  RG   ++ ++  LI  + +  + +    + + M+++  +P+  T  
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+  CK G++    ++L  +  + C P V     L+  + +  +  + + LLKRML  
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D ++Y++++    +  ++ +A  +   M       +   +T  I A+C+ GK + A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           +  +  M   G+   + T   LI+G  K  +  ++L   E ++  ++L +  + N ++  
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L +    K+   ML      G  P+ +TY+ L+ G  + G+I    ++   M+     P 
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT +I+ LCQ G++EEA+K    M+   + P    Y  +V  ++  G   +AL    
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675

Query: 363 EMVSEG 368
            MV  G
Sbjct: 676 AMVERG 681



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 154/350 (44%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S++ LIH + +  R +  + +   M E    P+  T   LI ALC  G +    ++ D 
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  + C P V   T LI  + ++ +IEE   + ++M++  +    I Y+ ++    K   
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A  +   M KR    N   +   +   C  GK  +A  L++ M + GL P   ++N+
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  +   +  +      M    + P C  F  +I   C+ G A  A+  L L L KG
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            S +E+T + LI G  K G+ ++ L +   +    I  T  +   ++  L +  K++E  
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                +    LVP V  Y +LV   +  G+   +  + E M   G  P+ 
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 150/342 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  VCR + +     S+I++N LI+   K  R    + +   M +    PN  T   
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LC+ G+    V +L R+     SP ++    LI  + +E  +     LL  M   +
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + ++ I+ A  K    + A      ML++G S +    TT I   C+ GK  +A 
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++ +    +     + N++++  +K  +++E L+   ++    L+PS   +  ++  L
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G+   +  +L L    G  PN   Y+ +I G  + G ++E  KL   M+   +SP  
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             YT ++      GKL+ A +  + M          IY SL+
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 3/229 (1%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A V Y  M   GF      Y T + A C+ G  E A   M ++   G          L+ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238

Query: 207 GCAKAKRIEESLSYCEQMMSRKLL--PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           G  +   + ++L   + +MS+++   P+  +++ +I  LCE G  ++A G+     +KG 
Sbjct: 239 GFCRGLNLRDALKVFD-VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  TY+ LI      G I +   L+ EM  +   P +  YT LI  LC+ GK+EEA+ 
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + M    + P V  Y +L+  + + G    A  L   M     KP+ 
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/333 (20%), Positives = 133/333 (39%), Gaps = 56/333 (16%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G SL  ++  TLI  V K  +      I + +++        ++  ++  L KG +++
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + ML +I+     P V+  T+L+  +I+   I     +L+ M     + +   Y++I+
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +E A  +   M   G S N   YT  +  Y   GK++ A   ++ M   G +
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683

Query: 196 PYDETFNLLIEGCAKAKR-IEES-LSYCEQMMSRKLLPSCSAFNEMIR------------ 241
             D  ++ L++G   +++ I+ S  S    +  R+  P C   NE+I             
Sbjct: 684 LNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPEC--INELISVVEQLGGCISGL 741

Query: 242 ------RLCECGNAKQANG----------------------------------MLTLALD 261
                 RLC+ G   ++N                                   ++TL L 
Sbjct: 742 CIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLK 801

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            GF P+  ++  +I G  KEG+ +   +L  E+
Sbjct: 802 SGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 158/324 (48%), Gaps = 14/324 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML--ENIRYPNEATIRTL 64
           AF + R + ++G    ++++NTL+  +    + D   +++  M   EN   PN  T   L
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 432

Query: 65  ISALCKGGQLQTYVDMLDRIHGK-----RCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           I  LCK G+L   V    +IH K      C  +V  N  L+   ++  +I+E M L K++
Sbjct: 433 IGGLCKEGRLTKAV----KIHRKMVKKGSCGNLVTYNM-LLGGCLKAGKIKEAMELWKQV 487

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L    + ++  YS+++    KMR L  A  ++ EM   G +   F Y T + + C+ G +
Sbjct: 488 LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 547

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           E+A  L QEM NA  +P   +FN +I+G  KA   +       +M+   L P    F+ +
Sbjct: 548 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 607

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I RL + G   +A   L   +  GF+P+ + Y  L+ G + +G+  E++ L ++M  K  
Sbjct: 608 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 667

Query: 300 SPTLPAYTSLISSLCQCGKLEEAD 323
                  +++++  C C  ++E D
Sbjct: 668 VLDRKIVSTILT--CLCHSIQEVD 689



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 37/366 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++ F V   + +RGF++++   N ++  + ++        + + M      P+  +  TL
Sbjct: 126 QLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTL 185

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK  +L+  V +L  +    C P  +  T+L+  + ++ R++E M LL+ M +K  
Sbjct: 186 INGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGF 245

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y  ++       NL+    +++EML +G SAN   Y+  +   C  G+ +EAN 
Sbjct: 246 DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANT 305

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++  M   G+ P   T+  LI+G                                   LC
Sbjct: 306 VLNAMAEHGIHPDVVTYTGLIDG-----------------------------------LC 330

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G A  A  +L L ++KG  P+ +TY+ L+ G  KEG + +  K+   M  K     + 
Sbjct: 331 KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV 390

Query: 305 AYTSLISSLCQCGKLEEADKYFKIM--KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
            Y +L+  LC  GK++EA K F  M    + L P V  +  L+G   ++G   KA+ +  
Sbjct: 391 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 450

Query: 363 EMVSEG 368
           +MV +G
Sbjct: 451 KMVKKG 456



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 178/378 (47%), Gaps = 2/378 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + + G    ++++  LI  + K  R      +   M+E    P+  T   L+S
Sbjct: 303 ANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLS 362

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML-RKNMI 125
            LCK G +     +L  +  K     V+   +L+  +  + +++E + L   M   +N +
Sbjct: 363 GLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCL 422

Query: 126 HDTI-AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +  +++++    K   L  A+ ++ +M+K+G   N   Y   +G   + GKI+EA  
Sbjct: 423 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAME 482

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++ + G  P   T+++LI+G  K + +  +     +M +  L P+   +N ++  LC
Sbjct: 483 LWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLC 542

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G+ +QA  +     +    P+ I+++ +I G  K G+ Q V +L  +M    + P   
Sbjct: 543 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 602

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +++LI+ L + G+L+EA    + M +    P   +Y+SL+     KG+  + ++L  +M
Sbjct: 603 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 662

Query: 365 VSEGLKPSTSYLCSASTC 382
            ++G       + +  TC
Sbjct: 663 AAKGTVLDRKIVSTILTC 680



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 120/257 (46%)

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           +RM   +++    + S ++      +  +    V   +LKRGF+ N F+    +   C  
Sbjct: 98  RRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRN 157

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G + EA  L++EM    + P   ++N LI G  KAK+++E++    +M +    P+    
Sbjct: 158 GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC 217

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             ++  LC+ G   +A  +L     KGF  + + Y  LI G+   G +    +L+ EM  
Sbjct: 218 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 277

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K IS  +  Y+ L+  LC+ G+ +EA+     M  H + P V  Y  L+    + G    
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337

Query: 357 ALHLCEEMVSEGLKPST 373
           A+ L   MV +G +PS 
Sbjct: 338 AMDLLNLMVEKGEEPSN 354



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 154/343 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S  + N L+  + +S    L + +Y+ M      P+  ++  LI       + Q    ++
Sbjct: 73  SWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVV 132

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  +  +  V +   ++  + +   + E M L++ M RK++  D ++Y+ ++    K 
Sbjct: 133 GLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKA 192

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           + L+ A+ +  EM   G   NS   TT +   C+ G+++EA  L++ M+  G       +
Sbjct: 193 KKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 252

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI G      ++      ++M+ + +  +   ++ ++  LC  G  K+AN +L    +
Sbjct: 253 GTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 312

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+ +TY+ LI G  K+G     + L   M  K   P+   Y  L+S LC+ G + +
Sbjct: 313 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 372

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A K  ++M        V  Y +L+    +KG   +AL L   M
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 136/326 (41%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           ++   L+    P+ AT   L+ AL +         +  R+      P     ++LI    
Sbjct: 61  LFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFA 120

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
             ++ + G  ++  +L++    +    ++++    +   +  A+ +  EM ++  S +  
Sbjct: 121 DAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIV 180

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            Y T I   C+  K++EA  L+ EME AG  P   T   L++G  K  R++E++   E M
Sbjct: 181 SYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM 240

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
             +        +  +I   C  GN  +   +    L KG S N +TYS L+ G  + G+ 
Sbjct: 241 KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQW 300

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           +E   +   M    I P +  YT LI  LC+ G+   A     +M      P    Y  L
Sbjct: 301 KEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVL 360

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLK 370
           +    ++G    A  +   M+ +G K
Sbjct: 361 LSGLCKEGLVIDAFKILRMMIEKGKK 386



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 89/192 (46%)

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +  EA  L     +  L P   T N L++  A+++    + S   +M    +LPS  + +
Sbjct: 54  QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I    +    +   G++ L L +GF+ N    + ++ G  + G + E + L  EM  K
Sbjct: 114 ALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK 173

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           S+SP + +Y +LI+ LC+  KL+EA      M++    P      +L+    + G   +A
Sbjct: 174 SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 233

Query: 358 LHLCEEMVSEGL 369
           + L E M  +G 
Sbjct: 234 MELLEAMKKKGF 245



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 35/193 (18%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR+  +A  +   +   G + +L  +N                                 
Sbjct: 509 MRMLNIAKGLFCEMRTHGLNPALFDYN--------------------------------- 535

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL+++LCK G L+    +   +    C P +I   ++I   ++    +    L  +M+
Sbjct: 536 --TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  D + +S ++    K+  L+ A    E M+  GF+ ++ VY + +      G   
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 653

Query: 181 EANCLMQEMENAG 193
           E   L+ +M   G
Sbjct: 654 EIINLLHQMAAKG 666


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 173/391 (44%), Gaps = 32/391 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ GF ++  SFN LI    K    D  W +   ML    YP  +T    I ALC+ G+
Sbjct: 335 MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGR 394

Query: 74  LQT----------------------YVDM---------LDRIHGKRCSPMVIVNTSLILR 102
           +                        Y+ M          D +     +P ++   +LI  
Sbjct: 395 IDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDG 454

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           + +   +E    L + M  + +  D I Y+ ++   VK  NL  A  +Y+EML++G   +
Sbjct: 455 LCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPD 514

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET-FNLLIEGCAKAKRIEESLSYC 221
            + YTT        G  E+A  L +EM        D T +N+ I+G  K   +E+++ + 
Sbjct: 515 GYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQ 574

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            ++    L+P    +  +IR   E G  K A  +    L K  SP+ ITY  LI G+AK 
Sbjct: 575 RKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKA 634

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G +++  +   EM+ + + P +  + +L+  +C+ G ++EA +Y   M+   + P    Y
Sbjct: 635 GRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSY 694

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L+  H +     + + L +EM+ + ++P 
Sbjct: 695 TILISKHCDLDKWEEVVKLYKEMLDKEIEPD 725



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 7/317 (2%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR F  A  +   L+    + S++++NTLI  + +S   +   R+ + M   + YP+  T
Sbjct: 423 MRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVIT 482

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI---EEGMVLLK 117
             TL+    K G L    ++ D +  K   P     T+   R + E R+   E+   L +
Sbjct: 483 YTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTT---RTVGELRLGDSEKAFRLHE 539

Query: 118 RMLRKNM-IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
            M+ ++    D   Y++ +    K+ NLE A+    ++ + G   +   YTT I  Y E 
Sbjct: 540 EMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEK 599

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+ + A  L  EM +  L P   T+ +LI G AKA R+E++  Y  +M  R + P+    
Sbjct: 600 GRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 659

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N ++  +C+ GN  +A   L    ++G SPN+ +Y+ LI  +    + +EV+KLY EM  
Sbjct: 660 NALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLD 719

Query: 297 KSISPTLPAYTSLISSL 313
           K I P    + +L   L
Sbjct: 720 KEIEPDGYTHRALFKHL 736



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 166/393 (42%), Gaps = 40/393 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++GF  S+ + N ++ V+  S   +    +Y+ M+ +   P   T  T++ +  K G L+
Sbjct: 232 RKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLE 291

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +   +  +      +    LI    +  ++EE       M R        +++ ++
Sbjct: 292 RVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLI 351

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K    + A  V +EML  G    +  Y  +I A CE+G+I++A  L+  M      
Sbjct: 352 EGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA----A 407

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N L+ G  K ++  E+    + + +  + PS   +N +I  LCE GN + A  +
Sbjct: 408 PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRL 467

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS------- 308
                 +   P+ ITY+ L+ G+ K G +    ++Y EM  K I P   AYT+       
Sbjct: 468 KEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELR 527

Query: 309 -----------------------------LISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
                                         I  LC+ G LE+A ++ + +    LVP   
Sbjct: 528 LGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHV 587

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +++  +LEKG    A  L +EM+S+ L PS
Sbjct: 588 TYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPS 620



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 141/298 (47%), Gaps = 39/298 (13%)

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           E+ ++  ++M+RK  +      ++++      R +  A  VYE M+  G       + T 
Sbjct: 221 EKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTM 280

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL----------- 218
           + +  + G +E  + +  EM+   ++  + T+N+LI G +K+ ++EE+            
Sbjct: 281 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGF 340

Query: 219 ------------SYCEQ------------MMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
                        YC+Q            M++  + P+ S +N  IR LCE G    A  
Sbjct: 341 PVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARE 400

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L+       +P+ ++Y+ L+ GY K  +  E   L+ +++  +I+P++  Y +LI  LC
Sbjct: 401 LLSSMA----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLC 456

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + G LE A +  + M S  + P V  Y +L+   ++ GN + A  + +EM+ +G+KP 
Sbjct: 457 ESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPD 514



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 82/166 (49%)

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K    E+ L   E+M+ +  LPS    N ++R L +     +A  +    +  G  P  
Sbjct: 215 TKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTV 274

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           IT++ ++    K G+++ V K++ EM+ ++I  +   Y  LI+   + GK+EEA ++   
Sbjct: 275 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGD 334

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           M+          +  L+  + ++G   +A  + +EM++ G+ P+TS
Sbjct: 335 MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTS 380


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 8/375 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A ++ R +  R       ++ TL+  + K DR D    +   M     +P+ AT  
Sbjct: 196 LVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFN 255

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+ LCK G       ++D +  K C P  +   +LI  +  + ++++ + LL RM+  
Sbjct: 256 VLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSS 315

Query: 123 NMIHDTIAYSLIVYAKVKM-RNLESA--LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             + + + Y  I+   VK  R L+ A  LV+ EE   RG+  N +VY+  +    + GK 
Sbjct: 316 KCVPNEVTYGTIINGLVKQGRALDGARVLVLMEE---RGYIVNEYVYSVLVSGLFKEGKS 372

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           EEA  L +E  + G K     ++ L++G  + ++ +E++    +M  +   P+   F+ +
Sbjct: 373 EEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSL 432

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           ++   E GN+ +A  +         + NE+ YS LI G  K+G++ E + ++ +M     
Sbjct: 433 MKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGC 492

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIM--KSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            P + AY+S+I  LC  G +EEA K +  M        P V  Y  L     ++ + ++A
Sbjct: 493 RPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRA 552

Query: 358 LHLCEEMVSEGLKPS 372
           + L   M+  G  P 
Sbjct: 553 VDLLNSMLDRGCDPD 567



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 149/344 (43%), Gaps = 40/344 (11%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLE----NIRYPNEATIRTLISALCKGGQLQTYVDM 80
           SFN++++V+ ++  +D     Y H++     NI  PN  +   +I ++CK G +   +++
Sbjct: 145 SFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNI-LPNVLSFNLIIKSMCKLGLVDNAIEL 203

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
              +  ++C                                   + D   Y  ++    K
Sbjct: 204 FREMPVRKC-----------------------------------VPDAYTYCTLMDGLCK 228

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           +  ++ A+ + +EM   G   +   +   I   C+ G       L+  M   G  P + T
Sbjct: 229 VDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVT 288

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N LI G     +++++LS  ++M+S K +P+   +  +I  L + G A     +L L  
Sbjct: 289 YNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLME 348

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++G+  NE  YS L+ G  KEG+ +E ++L+ E   K        Y++L+  LC+  K +
Sbjct: 349 ERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPD 408

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           EA K    M      P    + SL+    E GN  KA+ + ++M
Sbjct: 409 EAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDM 452



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 161/360 (44%), Gaps = 6/360 (1%)

Query: 19  FSLSLISFNTLI-HVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           F +   +F +LI +    SD N L   + +  LEN R  +E +   +  A  K       
Sbjct: 68  FKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLEN-RVFSEKSFFVMFKAYGKAHLPNKA 126

Query: 78  VDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---NMIHDTIAYSL 133
           +++  R+  +  C P V    S++  IIQ    +  +     ++     N++ + ++++L
Sbjct: 127 IELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNL 186

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +  K+  +++A+ ++ EM  R    +++ Y T +   C+  +I+EA  L+ EM+  G
Sbjct: 187 IIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEG 246

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   TFN+LI G  K           + M  +  +P+   +N +I  LC  G   +A 
Sbjct: 247 CFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 306

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   +     PNE+TY  +I G  K+G   +  ++   ME +        Y+ L+S L
Sbjct: 307 SLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGL 366

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + GK EEA + FK            +Y +LV          +A+ +  EM  +G  P+ 
Sbjct: 367 FKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNA 426



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 72/321 (22%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S  +FN LI+ + K      V ++  +M      PNE T  TLI  LC  G+L   + +L
Sbjct: 250 SPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 309

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           DR+   +C P  +   ++I  ++++ R  +G  +L  M  +  I +   YS++V    K 
Sbjct: 310 DRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKE 369

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E A+ +++E + +G   N+ +Y+  +   C   K +EA  ++ EM + G  P   TF
Sbjct: 370 GKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTF 429

Query: 202 N-----------------------------------LLIEGCAKAKRIEESLSYCEQMMS 226
           +                                   +LI G  K  ++ E++    +M++
Sbjct: 430 SSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLA 489

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQA----NGMLTLA----------------------- 259
               P   A++ MI+ LC+ G+ ++A    N ML L                        
Sbjct: 490 TGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSI 549

Query: 260 ----------LDKGFSPNEIT 270
                     LD+G  P+ +T
Sbjct: 550 SRAVDLLNSMLDRGCDPDLVT 570



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 20/167 (11%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML--ENIRYPNEATIRTLISALCKGGQLQ 75
           G    +++++++I  +  +   +   ++Y  ML  E    P+  T   L +ALCK   + 
Sbjct: 491 GCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSIS 550

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQE--ERIEEGMVLLKRMLRKNMIHDTIAYSL 133
             VD+L+ +  + C P  +V  ++ LR+++E  +  ++G   L                L
Sbjct: 551 RAVDLLNSMLDRGCDP-DLVTCNIFLRMLREKLDPPQDGAKFLDE--------------L 595

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +V    + RNL ++ +V E ML++  S  +  +   +   C+  KI+
Sbjct: 596 VVRLLKRQRNLGASKIV-EVMLQKFLSPKASTWARVVHELCQPKKIQ 641


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 183/370 (49%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +      +G   S+I++N ++  + K  + D   R+++ M ++   PN +T   
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAA-PNLSTYNI 382

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC+ G+L    ++ D +      P V     ++ R+ + ++++E   + ++M  K 
Sbjct: 383 LIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKV 442

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I +  ++    K+  ++ A  +YE+ML      NS VYT+ I  +  +G+ E+ +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + ++M N    P  +  N  ++   KA   E+  +  E++ SR+ +P   +++ +I  L
Sbjct: 503 KIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGL 562

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A +   +     ++G   +   Y+ +I G+ K G++ +  +L  EM+ K   PT+
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS  +   V IY SL+    + G   +A  + EE
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682

Query: 364 MVSEGLKPST 373
           ++ +GL P+ 
Sbjct: 683 LMQKGLTPNV 692



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 158/347 (45%), Gaps = 1/347 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++ +N  I    K  + D+ W+ +  +  N   P+E T  ++I  LCK  +L   V+M 
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +   R  P      ++I+      + +E   LL+R   K  I   IAY+ I+    KM
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ AL V+EEM K+  + N   Y   I   C  GK++ A  L   M+ AGL P   T 
Sbjct: 357 GKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTV 415

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++   K+++++E+ +  EQM  +   P    F  +I  L + G    A  +    LD
Sbjct: 416 NIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLD 475

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                N I Y+ LI  +   G  ++  K+Y +M  ++ SP L    + +  + + G+ E+
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEK 535

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
               F+ +KS   VP    Y  L+   ++ G   +   L   M  +G
Sbjct: 536 GRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/406 (22%), Positives = 181/406 (44%), Gaps = 35/406 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + AF++   +++ G   ++ + N ++  + KS + D    I++ M   +  P+E T  +
Sbjct: 393 LDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCS 452

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L K G++     + +++    C    IV TSLI       R E+G  + K M+ +N
Sbjct: 453 LIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQN 512

Query: 124 -----------------------------------MIHDTIAYSLIVYAKVKMRNLESAL 148
                                               + D  +YS++++  +K        
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETY 572

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            ++  M ++G   ++  Y   I  +C+ GK+ +A  L++EM+  G +P   T+  +I+G 
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
           AK  R++E+    E+  S+++  +   ++ +I    + G   +A  +L   + KG +PN 
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNV 692

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
            T++ L+    K  EI E L  +  M+    +P    Y  LI+ LC+  K  +A  +++ 
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           M+   + P    Y +++    + GN A+A  L +   + G  P ++
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/376 (21%), Positives = 161/376 (42%), Gaps = 1/376 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            FDV + + +  F  +  ++ TLI   +  + +D++  ++Q M E    P      TLI 
Sbjct: 152 GFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++ + + +LD +        +++    I    +  +++        +    +  
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++    K   L+ A+ ++E + K      ++ Y T I  Y   GK +EA  L+
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +     G  P    +N ++    K  +++E+L   E+M  +   P+ S +N +I  LC  
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRA 390

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +       G  PN  T + ++    K  ++ E   ++ +M+YK  +P    +
Sbjct: 391 GKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITF 450

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  L + G++++A K ++ M          +Y SL+      G K     + ++MV+
Sbjct: 451 CSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVN 510

Query: 367 EGLKPSTSYLCSASTC 382
           +   P    L +   C
Sbjct: 511 QNCSPDLQLLNTYMDC 526



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 157/354 (44%), Gaps = 1/354 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N+L+ V+ +    D + +I   M      P+  T   ++ +  K  +L+   D++  +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +  P     T+LI         +  + L ++M           ++ ++    K   +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           +SAL + +EM      A+  +Y   I ++ + GK++ A     E+E  GLKP + T+  +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    KA R++E++   E +   + +P   A+N MI      G   +A  +L     KG 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ I Y+ ++    K G++ E L+++ EM+ K  +P L  Y  LI  LC+ GKL+ A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFE 398

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
               M+   L P V     +V    +     +A  + E+M  +   P     CS
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCS 452



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 140/309 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ R F     S++ LIH + K+   +  + ++  M E     +      +I   CK G+
Sbjct: 543 IKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L+ +  K   P V+   S+I  + + +R++E  +L +    K +  + + YS 
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++ A ++ EE++++G + N + + + + A  +  +I EA    Q M+   
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+ +LI G  K ++  ++  + ++M  + + PS  ++  MI  L + GN  +A 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G  P+   Y+ +I G +      +   L+ E   + +         L+ +L
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842

Query: 314 CQCGKLEEA 322
            +   LE+A
Sbjct: 843 HKNDCLEQA 851



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 102/223 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++ +GF  +++++ ++I  + K DR D  + +++         N     +LI 
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +L+ +  K  +P V    SL+  +++ E I E +V  + M       
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y +++    K+R    A V ++EM K+G   ++  YTT I    + G I EA  L 
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
              +  G  P    +N +IEG +   R  ++ S  E+   R L
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 1/258 (0%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R  + H   +Y+ ++    + RN ++   +  EM   GF  +       + +  +  K+ 
Sbjct: 91  RTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLR 150

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E   ++Q M     +P    +  LI   +     +  L+  +QM      P+   F  +I
Sbjct: 151 EGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI 210

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           R   + G    A  +L          + + Y+  I  + K G++    K ++E+E   + 
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    YTS+I  LC+  +L+EA + F+ ++ +  VP    Y +++  +   G   +A  L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330

Query: 361 CEEMVSEGLKPST-SYLC 377
            E   ++G  PS  +Y C
Sbjct: 331 LERQRAKGSIPSVIAYNC 348


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 138/270 (51%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
            ++E  I     +   + +  +    ++++ ++   +K+ +L     +   M   G   +
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
            + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++   +
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           QM+S+ L P    +N +I  LC+ G+ KQA  ++   + KG  P++ITY+ LI G  KEG
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEG 325

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +  Y 
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            ++    +KG+      L +EM  +G KPS
Sbjct: 386 MIINEFCKKGDVWTGSKLLKEMQRDGYKPS 415



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCR-----------------YLEQR---GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR                 + E+    G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++  VL   ML K ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYKPSV 416



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   +  + + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   + E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LDKG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    +  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++     + D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM+ +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEENLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A+  F  M    LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 179/403 (44%), Gaps = 39/403 (9%)

Query: 9    DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRT 63
            D+C   E+    G   S++++NTL+    K  R D V  + + M        PN+ T   
Sbjct: 1102 DICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNV 1161

Query: 64   LISALCKGGQLQ------------------TYVDMLDRIHGKRCS--------------- 90
            +I+ L + G L+                  TY  ++  +  + C                
Sbjct: 1162 VITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGI 1221

Query: 91   -PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
             P V+   ++I  ++Q   +E   V    M    ++ D I Y+ ++    K  NL+ AL+
Sbjct: 1222 MPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALL 1281

Query: 150  VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
            ++ ++ + G +     Y   I  YC  G +EEA  L +EM   G  P   T+ +L++G  
Sbjct: 1282 LFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSL 1341

Query: 210  KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
              + +  +  + ++M+S+ L P C A+N  I      G+  +A  +  + + +G S + +
Sbjct: 1342 NVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTV 1401

Query: 270  TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            TY+ LI G  K G +++  +L  +M    + P    YT LI + C+ G L EA K F  M
Sbjct: 1402 TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 1461

Query: 330  KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             S  L+P    +  ++  +  +GN   A     +M+ EG++P+
Sbjct: 1462 ISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPN 1504



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 169/377 (44%), Gaps = 2/377 (0%)

Query: 8    FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
            +D+   +E  G   +++++N +IH + +S   +     +  M      P+  T  +L++ 
Sbjct: 1210 YDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG 1269

Query: 68   LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
             CK G L+  + +   +     +P V+    LI    +   +EE  +L + M  +  + +
Sbjct: 1270 YCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPN 1329

Query: 128  TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
               Y++++   + +R+L  A   ++EML +G   + F Y T I A    G I  A  L +
Sbjct: 1330 VCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELRE 1389

Query: 188  EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
             +   G+     T+N+LI G  K   ++++     +M+S  L P C  +  +I   CE G
Sbjct: 1390 VLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG 1449

Query: 248  NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              ++A  +    +  G  P+ +T++ +I  Y + G +      + +M  + + P    Y 
Sbjct: 1450 LLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 1509

Query: 308  SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
             LI +LC+ G+ + A  +F  M    LV     Y  L+  + + GN   A+    EM   
Sbjct: 1510 VLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQN 1569

Query: 368  GLKPSTSYLCSASTCRG 384
            G+ P   YL   +  +G
Sbjct: 1570 GIHP--DYLTHKALLKG 1584



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 90/201 (44%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            AF++   L   G S   +++N LIH + K+        +   M+ N   P+  T   LI 
Sbjct: 1384 AFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIH 1443

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            A C+ G L+    + + +      P  +  T +I    +   +       ++ML + +  
Sbjct: 1444 AHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEP 1503

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            + I Y+++++A  +M   + A   + EML+RG  AN + YT  I   C+ G  E+A    
Sbjct: 1504 NEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFY 1563

Query: 187  QEMENAGLKPYDETFNLLIEG 207
             EM   G+ P   T   L++G
Sbjct: 1564 FEMHQNGIHPDYLTHKALLKG 1584



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 2/191 (1%)

Query: 99   LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
            LI  + +   +++   L  +M+   +  D I Y+ +++A  +   L  A  ++  M+  G
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 1465

Query: 159  FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
               ++  +T  I AYC  G +  A    ++M   G++P + T+N+LI    +  R + + 
Sbjct: 1466 LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAS 1525

Query: 219  SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
             +  +M+ R L+ +   +  +I   C+ GN + A          G  P+ +T+  L+ G+
Sbjct: 1526 HHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585

Query: 279  AKEGEIQEVLK 289
              +G +   ++
Sbjct: 1586 --DGHVHHTIE 1594


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 181/368 (49%), Gaps = 1/368 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +++ G   +L   NT I+V+ K  + +   R  + M      P+  T  +LI 
Sbjct: 250 ALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIK 309

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMI 125
             C   +++  ++++  +  K C P  +   +++  + +E++IE+   L+++M++  N+I
Sbjct: 310 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLI 369

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ +++   K  + + AL   +E   +GF  +   Y+  + ++C+ G+++EA  L
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 429

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M +    P   T+  +++G  +  RI+E+    +QM      P+  ++  ++  LC 
Sbjct: 430 VIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCH 489

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G + +A  M+ ++ +  ++PN ITY  ++ G+ +EG++ E   L  EM  K   PT   
Sbjct: 490 SGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVE 549

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
              LI SLCQ  K+ EA KY +   +      V  + +++    + G+   AL + E+M 
Sbjct: 550 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMY 609

Query: 366 SEGLKPST 373
                P  
Sbjct: 610 LSNKHPDA 617



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 169/359 (47%), Gaps = 3/359 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLISALCKGGQL 74
           Q  +S   + + TL+ V++K+       R+ + M    I    EA    ++S   + G+L
Sbjct: 189 QWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVS-YSRAGKL 247

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +  + +L  +      P + +  + I  +++  ++E+ +  L+RM    +  D + Y+ +
Sbjct: 248 RNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSL 307

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAG 193
           +     +  +E AL +   +  +G   +   Y T +G  C+  KIE+  CLM++M +++ 
Sbjct: 308 IKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSN 367

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N LI   +K    +++L++ ++   +        ++ ++   C+ G   +A 
Sbjct: 368 LIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAK 427

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++     +  +P+ +TY+ ++ G+ + G I E  K+  +M      P   +YT+L++ L
Sbjct: 428 SLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGL 487

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  GK  EA +   + + H   P    Y  ++     +G  ++A  L  EMV +G  P+
Sbjct: 488 CHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPT 546



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 166/362 (45%), Gaps = 1/362 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRT 63
           E A ++   L  +G     +S+ T++  + K  + + V  + + M+++    P++ T  T
Sbjct: 318 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNT 377

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L K G     +  L     K      +  ++++    Q+ R++E   L+  M  ++
Sbjct: 378 LIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRS 437

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y+ IV    ++  ++ A  + ++M K G   N+  YT  +   C  GK  EA 
Sbjct: 438 CNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAR 497

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++   E     P   T+ +++ G  +  ++ E+     +M+ +   P+    N +I+ L
Sbjct: 498 EMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSL 557

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A   L   L+KG + N + ++ +I G+ + G+++  L +  +M   +  P  
Sbjct: 558 CQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDA 617

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT+L  +L + G+L+EA +    M S  L P    + S++  + + G     L+L + 
Sbjct: 618 VTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDR 677

Query: 364 MV 365
           MV
Sbjct: 678 MV 679



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 2/276 (0%)

Query: 100 ILRIIQEERIEEGMV-LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           +L ++ + ++ +G   +L+ M R+ +     A+  ++ +  +   L +AL V   M K G
Sbjct: 202 LLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAG 261

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              N  +  T I    +  K+E+A   ++ M+  G+KP   T+N LI+G     RIE++L
Sbjct: 262 VEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 321

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGG 277
                + S+   P   ++  ++  LC+    +Q   ++  +  D    P+++TY+ LI  
Sbjct: 322 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHM 381

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            +K G   + L    E E K        Y++++ S CQ G+++EA      M S S  P 
Sbjct: 382 LSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPD 441

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           V  Y ++V      G   +A  + ++M   G KP+T
Sbjct: 442 VVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNT 477



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 128/274 (46%), Gaps = 2/274 (0%)

Query: 51  ENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE 110
           E+   PN  T   ++    + G+L    D+   +  K   P  +    LI  + Q +++ 
Sbjct: 505 EHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVV 564

Query: 111 EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI 170
           E    L+  L K    + + ++ +++   ++ ++E+AL V E+M       ++  YT   
Sbjct: 565 EAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALF 624

Query: 171 GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
            A  + G+++EA  L+ +M + GL P   TF  +I    +  R+++ L+  ++M+ RK  
Sbjct: 625 DALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRK-- 682

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P  + +N +I +LC+ GN ++A  +L   L      +  T   L+    K+G      K+
Sbjct: 683 PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKV 742

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             +M  ++++P L     +   L   G L EADK
Sbjct: 743 ACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADK 776



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/257 (20%), Positives = 116/257 (45%), Gaps = 2/257 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ R + ++GF  + +  N LI  + ++ +     +  +  L      N     T+I 
Sbjct: 531 ACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIH 590

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G ++  + +L+ ++     P  +  T+L   + ++ R++E   L+ +ML K +  
Sbjct: 591 GFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDP 650

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + +  +++   +   ++  L + + M+KR       +Y   I   C++G +EEA  L+
Sbjct: 651 TPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLL 708

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            ++     K    T ++L+E C K      +     QM  R L P      ++ ++L   
Sbjct: 709 GKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLD 768

Query: 247 GNAKQANGMLTLALDKG 263
           GN  +A+ ++   +++G
Sbjct: 769 GNLVEADKLMLRFVERG 785


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 179/354 (50%), Gaps = 8/354 (2%)

Query: 25  SFNT---LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +FNT   L+  + K   ND    ++  M  +   P+ + +  L+S+  + G+L +  + L
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFL 167

Query: 82  DRIH--GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           + +H  G + SP V  N  L+  ++++  ++E ++L +  L    + D  ++++++    
Sbjct: 168 NEVHCYGIKVSPFVYNN--LLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLC 225

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE-MENAGLKPYD 198
           ++  ++ A   ++ M   G   +   Y T I  +C   +I + + L++E M   G+ P  
Sbjct: 226 RIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDV 285

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+  +I G  K   ++ +    ++M+S  + P+   FN +I    + GN + A  M   
Sbjct: 286 ITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEK 345

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L  G  P+ +T++ LI GY +EGE+ + LKL+ EM+ +++SP +  Y  LI++LC+  +
Sbjct: 346 MLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENR 405

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + EA  + + +KS  +VP   IY  ++    + G   +A  +  EM  +  +P 
Sbjct: 406 IREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPD 459



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 1/341 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  +S   +N L++++ K +  D    +++  LE    P+  +   LI  LC+ G++   
Sbjct: 174 GIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKA 233

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR-MLRKNMIHDTIAYSLIVY 136
            +    +    C P ++   +LI    +   I +G  LLK  ML K +  D I Y+ I+ 
Sbjct: 234 FEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIIS 293

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K+ ++++A  +++EM+  G   N F +   I  + + G +  A  + ++M   G  P
Sbjct: 294 GYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLP 353

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TF  LI+G  +   + + L   E+M  R L P+   +  +I  LC+    ++A   L
Sbjct: 354 DVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFL 413

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                    P    Y+ +I G+ K G++ E   +  EM+ K   P    +T LI   C  
Sbjct: 414 RHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMK 473

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           G++ EA   F  M   + VP      SL+   L+ G   +A
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEA 514



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 150/307 (48%), Gaps = 1/307 (0%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F   + SFN LI  + +    D  +  +Q+M     +P+  +  TLI+  C+  ++    
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269

Query: 79  DML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           D+L + +  K  SP VI  TS+I    +   ++    L   M+   +  +   +++++  
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+ N+ SA+V+YE+ML  G   +   +T+ I  YC  G++ +   L +EM+   L P 
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPN 389

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ +LI    K  RI E+ ++   + S +++P    +N +I   C+ G   +AN ++ 
Sbjct: 390 VYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVA 449

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +K   P++IT++ LI G   +G + E +  +Y+M   +  P      SLIS L + G
Sbjct: 450 EMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 509

Query: 318 KLEEADK 324
              EA +
Sbjct: 510 MPNEASQ 516



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 11/291 (3%)

Query: 95  VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL------ESAL 148
           +N S+   +I+  R  + ++ LK     +  H +I ++   Y  + MRNL      +SA 
Sbjct: 74  LNPSIAFEVIK--RFSDPLLGLK-FFEFSRTHLSINHTFNTY-DLLMRNLCKVGLNDSAK 129

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           +V++ M   G   +S +    + +Y   GK++ A   + E+   G+K     +N L+   
Sbjct: 130 IVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNML 189

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K   ++E++    + +    +P   +FN +IR LC  G   +A        + G  P+ 
Sbjct: 190 VKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDI 249

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYE-MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           ++Y+ LI G+ +  EI +   L  E M  K +SP +  YTS+IS  C+ G ++ A + F 
Sbjct: 250 VSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFD 309

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            M S  + P    +  L+    + GN   A+ + E+M+  G  P      S
Sbjct: 310 EMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 114/246 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S  +I++ ++I    K         ++  M+ +   PN+ T   LI    K G +++
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + M +++    C P V+  TSLI    +E  + +G+ L + M  +N+  +   Y++++ 
Sbjct: 339 AMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   +  A      +         F+Y   I  +C+ GK++EAN ++ EM+    +P
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP 458

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              TF +LI G     R+ E++S   +M+    +P     N +I  L + G   +A+ + 
Sbjct: 459 DKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIK 518

Query: 257 TLALDK 262
             AL K
Sbjct: 519 QAALQK 524


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 125 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 178

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 179 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 208

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN L  EM    L P   TF  LI+G  K  R++ ++ 
Sbjct: 209 QPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAME 268

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ LLP    +N +I  LC+ G+ KQAN ++     KG  P++ITY+ LI G  
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCC 328

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDAR 388

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM  +G  PS
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 148/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y T I   C+ G ++
Sbjct: 240 VKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +AN L+ EM   GL+P   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 300 QANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN +   
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L K   PN +T++ LI G+ K G +   +++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 238 MLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A+     M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 298 LKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I  Y 
Sbjct: 24  TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITGYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     EN    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 84  ESGFLRDAIECYRLTRENKLCVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A+K F  M   +LVP    + +L+  H + G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 263 VDLAMEIYKQMLSQSLLPD 281


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 183/369 (49%), Gaps = 1/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +      +G   S+I++N ++  + K  + D   ++++ M ++   PN +T   
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNI 382

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC+ G+L T  ++ D +      P V     ++ R+ + ++++E   + + M  K 
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I +  ++    K+  ++ A  VYE+ML      NS VYT+ I  +  +G+ E+ +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + ++M N    P  +  N  ++   KA   E+  +  E++ +R+ +P   +++ +I  L
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A +   +     ++G   +   Y+ +I G+ K G++ +  +L  EM+ K   PT+
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS  +   V IY SL+    + G   +A  + EE
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682

Query: 364 MVSEGLKPS 372
           ++ +GL P+
Sbjct: 683 LMQKGLTPN 691



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 158/347 (45%), Gaps = 1/347 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++ +N  I    K  + D+ W+ +  +  N   P+E T  ++I  LCK  +L   V+M 
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +   R  P      ++I+      + +E   LL+R   K  I   IAY+ I+    KM
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ AL V+EEM K+  + N   Y   I   C  GK++ A  L   M+ AGL P   T 
Sbjct: 357 GKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++   K+++++E+ +  E+M  +   P    F  +I  L + G    A  +    LD
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                N I Y+ LI  +   G  ++  K+Y +M  ++ SP L    + +  + + G+ E+
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
               F+ +K+   VP    Y  L+   ++ G   +   L   M  +G
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 181/406 (44%), Gaps = 35/406 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + AF++   +++ G   ++ + N ++  + KS + D    +++ M   +  P+E T  +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L K G++     + +++    C    IV TSLI       R E+G  + K M+ +N
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512

Query: 124 -----------------------------------MIHDTIAYSLIVYAKVKMRNLESAL 148
                                               + D  +YS++++  +K        
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            ++  M ++G   ++  Y   I  +C+ GK+ +A  L++EM+  G +P   T+  +I+G 
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
           AK  R++E+    E+  S+++  +   ++ +I    + G   +A  +L   + KG +PN 
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
            T++ L+    K  EI E L  +  M+    +P    Y  LI+ LC+  K  +A  +++ 
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           M+   + P    Y +++    + GN A+A  L +   + G  P ++
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 161/376 (42%), Gaps = 1/376 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            +DV + + +  F  +  ++ TLI   +  + +D++  ++Q M E    P      TLI 
Sbjct: 152 GYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++ + + +LD +        +++    I    +  +++        +    +  
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++    K   L+ A+ ++E + K      ++ Y T I  Y   GK +EA  L+
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +     G  P    +N ++    K  +++E+L   E+M  +   P+ S +N +I  LC  
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRA 390

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +       G  PN  T + ++    K  ++ E   ++ EM+YK  +P    +
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  L + G++++A K ++ M          +Y SL+      G K     + ++M++
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510

Query: 367 EGLKPSTSYLCSASTC 382
           +   P    L +   C
Sbjct: 511 QNCSPDLQLLNTYMDC 526



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/368 (20%), Positives = 165/368 (44%), Gaps = 1/368 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A+     +E  G     +++ ++I V+ K++R D    +++H+ +N R P      T+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I      G+      +L+R   K   P VI    ++  + +  +++E + + + M +K+ 
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDA 373

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   Y++++    +   L++A  + + M K G   N       +   C+  K++EA  
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + +EM+     P + TF  LI+G  K  R++++    E+M+      +   +  +I+   
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  +  + +    +++  SP+    +  +    K GE ++   ++ E++ +   P   
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +Y+ LI  L + G   E  + F  MK    V     Y  ++    + G   KA  L EEM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613

Query: 365 VSEGLKPS 372
            ++G +P+
Sbjct: 614 KTKGFEPT 621



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 1/354 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N+L+ V+ +    D + +I   M      P+  T   ++    K  +L+   D++  +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +  P     T+LI         +  + L ++M           ++ ++    K   +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           +SAL + +EM      A+  +Y   I ++ + GK++ A     E+E  GLKP + T+  +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    KA R++E++   E +   + +P   A+N MI      G   +A  +L     KG 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ I Y+ ++    K G++ E LK++ EM+ K  +P L  Y  LI  LC+ GKL+ A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
               M+   L P V     +V    +     +A  + EEM  +   P     CS
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 140/309 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ R F     S++ LIH + K+   +  + ++  M E     +      +I   CK G+
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L+ +  K   P V+   S+I  + + +R++E  +L +    K +  + + YS 
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++ A ++ EE++++G + N + + + + A  +  +I EA    Q M+   
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+ +LI G  K ++  ++  + ++M  + + PS  ++  MI  L + GN  +A 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G  P+   Y+ +I G +      +   L+ E   + +         L+ +L
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842

Query: 314 CQCGKLEEA 322
            +   LE+A
Sbjct: 843 HKNDCLEQA 851



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 102/223 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++ +GF  +++++ ++I  + K DR D  + +++         N     +LI 
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +L+ +  K  +P +    SL+  +++ E I E +V  + M       
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y +++    K+R    A V ++EM K+G   ++  YTT I    + G I EA  L 
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
              +  G  P    +N +IEG +   R  ++ S  E+   R L
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 1/258 (0%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R  + H   +Y+ ++    + RN ++   +  EM   GF  +       +    +  K+ 
Sbjct: 91  RTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLR 150

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E   ++Q M     +P    +  LI   +     +  L+  +QM      P+   F  +I
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI 210

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           R   + G    A  +L          + + Y+  I  + K G++    K ++E+E   + 
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    YTS+I  LC+  +L+EA + F+ ++ +  VP    Y +++  +   G   +A  L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330

Query: 361 CEEMVSEGLKPST-SYLC 377
            E   ++G  PS  +Y C
Sbjct: 331 LERQRAKGSIPSVIAYNC 348


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 158/319 (49%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   LI   C+ G ++  + +   +        VI+ + L+  + +  +++E + L
Sbjct: 289 PDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQL 348

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M   N+  D + YS++++   K   ++ A+ +Y+EM       NSF ++  +   CE
Sbjct: 349 LYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCE 408

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G + +A      +  + L+P    +N++I+G  K   +EE++   +++  + + PS   
Sbjct: 409 KGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVT 468

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN +I   C+     +A  +L      G  P+ +TY+ L+  Y +EG I ++ +L  EM 
Sbjct: 469 FNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMN 528

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K I PT+  YT +I  LC+  KLEE+ +  + M++  L P    Y +++    +  +  
Sbjct: 529 LKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMR 588

Query: 356 KALHLCEEMVSEGLKPSTS 374
           KA  L ++M+   L+P+ +
Sbjct: 589 KAFELLDDMLIHNLEPTPA 607



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 174/391 (44%), Gaps = 35/391 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E       L++++ LIH + K  +     ++Y+ M  N  +PN      ++  LC+ G 
Sbjct: 352 MEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGM 411

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L       D +      P V +   +I   ++   +EE + L KR+  K +    + ++ 
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG---------------- 177
           ++Y   K R +  A  + E +   G   ++  YTT + AYCE G                
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531

Query: 178 -------------------KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
                              K+EE+  L+++M   GL P   T+N +I+   KAK + ++ 
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              + M+   L P+ + +N +I  LC  G+ + A+ +L    D+  +  ++ Y+ +I  +
Sbjct: 592 ELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAH 651

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
             +G+ Q  +K++++M  K    ++  Y+++I+ LC+   + EA  YF IM S  + P  
Sbjct: 652 CVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQ 711

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +I+E ++      G+      L   M+  GL
Sbjct: 712 EIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/368 (21%), Positives = 181/368 (49%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + R L   GF L++I ++ L+  + K  + D   ++   M  N   P+  T   L
Sbjct: 308 EEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSIL 367

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK G++Q  + +   +   R  P    ++ ++  + ++  + +  +    ++  N+
Sbjct: 368 IHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNL 427

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y++++   VK+ ++E A+ +Y+ +  +  + +   + + I  +C+  K+ EA  
Sbjct: 428 RPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARR 487

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L++ ++  GL+P   T+  L+    +   I +      +M  + + P+   +  +I+ LC
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLC 547

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +    +++  +L     KG +P++ITY+ +I  + K  ++++  +L  +M   ++ PT  
Sbjct: 548 KQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPA 607

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  LI  LC+ G +E+AD+    ++  ++      Y +++  H  KG+  +A+ +  +M
Sbjct: 608 TYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM 667

Query: 365 VSEGLKPS 372
           V +G + S
Sbjct: 668 VEKGFEVS 675



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 184/372 (49%), Gaps = 4/372 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+   A  V   ++++    S+ ++N+L++ +  +D   ++W +Y  + ++    +  T 
Sbjct: 97  RMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTD---IMWDVYNDIKDSGTPQSARTS 153

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             ++  LC   + +  V  L +  GK  +P V+   +++ R  +    +        ML+
Sbjct: 154 SIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLK 213

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ DT +Y+++++  +   ++E AL +  +M K+G   +   Y      +   G +  
Sbjct: 214 YGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSG 273

Query: 182 ANCLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           A  ++Q+M  + GLKP   T+ +LI G  +   IEE+L     ++S     +   ++ ++
Sbjct: 274 AREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLL 333

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G   +A  +L         P+ +TYS LI G  K+G++Q+ ++LY EM +  I 
Sbjct: 334 SSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIF 393

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P   A++ ++  LC+ G L +A  YF  +   +L P V +Y  ++  +++ G+  +A+ L
Sbjct: 394 PNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRL 453

Query: 361 CEEMVSEGLKPS 372
            + +  + + PS
Sbjct: 454 YKRLRDKAITPS 465



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 127/284 (44%), Gaps = 22/284 (7%)

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           ++ R ++  ++L +ML++ +    +  +L V  K+K +NL  ++  Y  +L         
Sbjct: 75  RKRRFKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLL-YNLRHTDI 133

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           ++  +                  +++++G      T +++++G     R  +++ +  Q 
Sbjct: 134 MWDVY-----------------NDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQN 176

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
             ++  PS  +FN ++ R C+ G A  A     + L  G  P+  +Y+ LI G    G +
Sbjct: 177 DGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSM 236

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYES 343
           +E L+L  +ME + + P +  Y  +       G +  A +   K++    L P +  Y  
Sbjct: 237 EEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTV 296

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST---SYLCSASTCRG 384
           L+  H + GN  +AL L  +++S G + +    S L S+   RG
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRG 340



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 82/187 (43%), Gaps = 4/187 (2%)

Query: 48  HMLENIRY----PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            +LE++R     P++ T  T+I   CK   ++   ++LD +      P       LI  +
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +   +E+   +L  +  +N+    +AY+ ++ A     + + A+ V+ +M+++GF  + 
Sbjct: 617 CRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSI 676

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y+  I   C+   I EA      M + G+ P  E F +++    +A  +         
Sbjct: 677 KDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAV 736

Query: 224 MMSRKLL 230
           M+   LL
Sbjct: 737 MIKFGLL 743


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 181/370 (48%), Gaps = 3/370 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A DV   + ++G    +I++++LI  ++K+ R D   ++   M+     P      ++
Sbjct: 158 ERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSI 217

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++ LCK G++Q  V  +  +  +R  P V   + ++   I   ++EE   +++ M  ++ 
Sbjct: 218 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDC 277

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DTI+Y++ + A   +   E A  V+E M+++G   +   Y   I  +C+ G +  A  
Sbjct: 278 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 337

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ M+ A +KP    + ++++G  K+ R+EE+L   ++++   +LPS   +N +I  LC
Sbjct: 338 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 397

Query: 245 ECGNAKQANGMLTLALDKG--FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           +     +A  +L     +     P+ +TYS +I G  K G  +    L  EM    + P 
Sbjct: 398 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD 457

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YTSLI +L   GK+  A +  + M    + P    Y +LV I L + +   A  L +
Sbjct: 458 CFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQI-LCRSDVDAAWDLLQ 516

Query: 363 EMVSEGLKPS 372
           EM+  G  P+
Sbjct: 517 EMMRNGHTPN 526



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 161/351 (45%), Gaps = 2/351 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++  ++  + K+   D     Y+ M+ +   P   T   L+  LCK  +++   D+ + 
Sbjct: 107 VTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEE 166

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K   P +I  +SLI  + +  R++E   L+  M+ +      +AY+ IV    K   
Sbjct: 167 MIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGR 226

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A+   +EM +R        Y+  +  Y   GK+EEA  +M+EM +    P   ++ +
Sbjct: 227 IQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTM 286

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
            IE      R EE+    E M+ +   P    +  +I   C+ G+   A  +L L     
Sbjct: 287 FIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAA 346

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN   Y+ ++ G+ K   ++E L+LY  +    I P+   Y ++I++LC+  K++EA 
Sbjct: 347 VKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEAL 406

Query: 324 KYFKIM--KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + M  +   L P +  Y  ++    + G + +A  L  EM+  G+ P 
Sbjct: 407 ELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD 457



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSD---RNDLVWRIYQ---------HMLE 51
           FEV   + R ++ RG     I+ N   H V  S    R DL   +            + E
Sbjct: 45  FEVVNALLREMKARG-----ITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFE 99

Query: 52  NIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE 111
            I  P+  T   ++  L K G     ++  +++   +C P ++  T L+  + +  ++E 
Sbjct: 100 AIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVER 159

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
              + + M+RK    D IAYS ++    K   ++ A  + + M+ RG    +  YT+ + 
Sbjct: 160 ACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVA 219

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             C+ G+I+EA   +QEM    L+P  +T++ ++ G     ++EE+ +  E+M  R   P
Sbjct: 220 GLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAP 279

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
              ++   I  L   G  ++A  +    ++KG  P+  TY  +I  + KEG +     + 
Sbjct: 280 DTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVL 339

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
             M+  ++ P    YT ++    +  +LEEA + ++ +    ++P    Y +++    + 
Sbjct: 340 RLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKL 399

Query: 352 GNKAKALHLCEEMV--SEGLKPS 372
               +AL L  EM    E L+PS
Sbjct: 400 KKMDEALELLREMQRRKEELEPS 422



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/356 (21%), Positives = 160/356 (44%), Gaps = 7/356 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           SFN L+      D  ++V  + + M       N AT   ++SALC    L   V   +  
Sbjct: 31  SFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSR 90

Query: 85  HGKRC-------SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             + C       +P  +  T+++  + +    + G+   ++M+        + Y+++V  
Sbjct: 91  TEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDG 150

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E A  V+EEM+++G   +   Y++ I    + G+++EA  L+  M   G  P 
Sbjct: 151 LCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPT 210

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +  ++ G  K  RI+E++   ++M  R+L P    ++ ++      G  ++A  ++ 
Sbjct: 211 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVME 270

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+  +P+ I+Y+  I      G  +E  K++  M  K   P +  Y  +I + C+ G
Sbjct: 271 EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 330

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  A    ++M   ++ P   IY  ++   ++     +AL L + ++ +G+ PST
Sbjct: 331 SMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 386



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N ++  L   G    A G    ++ +   PN  +++ L+ G+A   + + V  L  EM+ 
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL-------VPGVDIYESLVGIHL 349
           + I+     +  ++S+LC    L++A  YF      +         P    Y ++V    
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
           + GN    L   E+MV+   +P+
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPT 140


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 1/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF +   +F  +I   +           ++ +++    PN      +I  LCK G ++
Sbjct: 233 ERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIK 292

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYSLI 134
              +ML+ + GK   P V  +TSLI  + ++   E+   L  +++R +N   + + Y+ +
Sbjct: 293 QAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAM 352

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    +   L  A ++   M ++G   N+  YTT I  +C+ G  E A  LM  M + G 
Sbjct: 353 ISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGF 412

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+N ++ G  K  R++E+    E      L P    +N ++   C+  N +QA  
Sbjct: 413 SPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALA 472

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +    L  G  P+  +Y+ LI  + +E  ++E    + E     I PT   YTS+I   C
Sbjct: 473 LFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYC 532

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           + G L  A K+F  +  H   P    Y +++    ++  + +A  L + M+ +GL P
Sbjct: 533 REGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 151/326 (46%), Gaps = 1/326 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R L   G   +LI+F  +I  + K       + + + M+     PN  T  +LI  LCK 
Sbjct: 264 RRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKK 323

Query: 72  GQLQ-TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
           G  +  +   L  +  +   P V+  T++I    +E+++    +LL RM  + ++ +T  
Sbjct: 324 GWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNT 383

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ ++    K  N E A  +   M   GFS N   Y   +   C+ G+++EA  ++++  
Sbjct: 384 YTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGF 443

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             GLKP   T+N+L+    K + I ++L+   +M+   + P   ++  +I   C     K
Sbjct: 444 QNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMK 503

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           ++      A+  G  P   TY+ +I GY +EG +   +K ++ +     +P    Y ++I
Sbjct: 504 ESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAII 563

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVP 336
           S LC+  K +EA   +  M    LVP
Sbjct: 564 SGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 1/266 (0%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           R++E + ++  M  + ++ +T   + I+    +M  +E A +++EEM  RG   +S  Y 
Sbjct: 150 RLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYR 209

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             +  YC+ G I EA+  +  M   G    + TF L+I   +       +L Y  +++  
Sbjct: 210 VMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDM 269

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            L P+   F  MI  LC+ G+ KQA  ML   + KG+ PN  T++ LI G  K+G  ++ 
Sbjct: 270 GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKA 329

Query: 288 LKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            +L+ ++   ++  P +  YT++IS  C+  KL  A+     MK   LVP  + Y +L+ 
Sbjct: 330 FRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLID 389

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
            H + GN  +A  L   M SEG  P+
Sbjct: 390 GHCKAGNFERAYDLMNLMSSEGFSPN 415



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 117/259 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++  +I    + D+ +    +   M E    PN  T  TLI   CK G  +   D++
Sbjct: 345 NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLM 404

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  +  SP +    +++  + +  R++E   +L+   +  +  D   Y++++    K 
Sbjct: 405 NLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQ 464

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+  AL ++ +MLK G   +   YTT I  +C   +++E+    +E    G+ P ++T+
Sbjct: 465 ENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTY 524

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I G  +   +  ++ +  ++      P    +  +I  LC+     +A  +    ++
Sbjct: 525 TSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIE 584

Query: 262 KGFSPNEITYSHLIGGYAK 280
           KG  P E+T   L   Y K
Sbjct: 585 KGLVPCEVTRITLAYEYCK 603



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 1/232 (0%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ +  EM  +G   N+      I    E G +E A  L +EM   G++P   ++ +
Sbjct: 151 LKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRV 210

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++    K   I E+  +   M+ R  +   + F  +I R    G   +A       +D G
Sbjct: 211 MVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMG 270

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN I ++ +I G  K G I++  ++  EM  K   P +  +TSLI  LC+ G  E+A 
Sbjct: 271 LEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAF 330

Query: 324 KYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           + F K+++S +  P V  Y +++  +  +    +A  L   M  +GL P+T+
Sbjct: 331 RLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTN 382



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 35/203 (17%)

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           + ++ E G+++EA  ++ EM N GL P   T N +I+  ++   +E +    E+M  R +
Sbjct: 142 VESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGV 201

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P   ++  M+   C+ GN  +A+  L++ L++GF  +  T++ +I  ++ +G     L 
Sbjct: 202 QPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALW 261

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
            +  +    + P L  +T +I  LC+                                  
Sbjct: 262 YFRRLVDMGLEPNLINFTCMIEGLCK---------------------------------- 287

Query: 350 EKGNKAKALHLCEEMVSEGLKPS 372
            +G+  +A  + EEMV +G KP+
Sbjct: 288 -RGSIKQAFEMLEEMVGKGWKPN 309



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 91/197 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+D+   +   GFS +L ++N +++ + K  R    +++ +   +N   P++ T   
Sbjct: 397 FERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNI 456

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+S  CK   ++  + + +++      P +   T+LI    +E R++E  +  +  +R  
Sbjct: 457 LMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIG 516

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +I     Y+ ++    +  NL  A+  +  +   G + +S  Y   I   C+  K +EA 
Sbjct: 517 IIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEAR 576

Query: 184 CLMQEMENAGLKPYDET 200
            L   M   GL P + T
Sbjct: 577 SLYDSMIEKGLVPCEVT 593


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 167/365 (45%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D+   +E  G   ++ ++   I V+ ++ R D  + I + M +    P+  T   LI AL
Sbjct: 248 DLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDAL 307

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C  G+L    ++  ++      P ++   +L+ +      +E        M       D 
Sbjct: 308 CAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDV 367

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y+++V A  K   ++ A  + + M  RG   N   Y T I       +++EA  L   
Sbjct: 368 VTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNN 427

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ME+ G+ P   ++ L I+   K    E++L   E+M  R ++PS +A N  +  L E G 
Sbjct: 428 MESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGR 487

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            ++A  +     + G SP+ +TY+ ++  Y+K G+I +  KL  EM  +   P +    S
Sbjct: 488 IREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNS 547

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI +L + G+++EA + F  +K   L P V  Y  L+    ++G   KAL L   M   G
Sbjct: 548 LIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607

Query: 369 LKPST 373
             P+T
Sbjct: 608 CPPNT 612



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 157/343 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            L+++ TL+         + V R +  M  +   P+  T   L+ ALCK G++    DML
Sbjct: 331 DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDML 390

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +  +   P +    +LI  ++   R++E + L   M    +     +Y L +    K+
Sbjct: 391 DVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKL 450

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            + E AL  +E+M KRG   +       + +  E G+I EA  +  ++ N GL P   T+
Sbjct: 451 GDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTY 510

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++  +KA +I+++     +M+S    P     N +I  L + G   +A  M     D
Sbjct: 511 NMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD 570

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
              +P  +TY+ LI G  KEG++ + L L+  M+     P    + +L+  LC+   ++ 
Sbjct: 571 LKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDL 630

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A K F  M   +  P V  Y +++   +++G    A     +M
Sbjct: 631 ALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM 673



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 162/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q GF L+  S+N LI+ + +        ++Y+ M+     P+  T   L+ AL +   
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
             T +D+L+ +      P +   T  I  + +  RI++   +LK M  +    D + Y++
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A      L+ A  +Y +M       +   Y T +  +  YG +E       EME  G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+ +L+E   K+ +++++    + M  R ++P+   +N +I  L       +A 
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G +P   +Y   I  Y K G+ ++ L  + +M+ + I P++ A  + + SL
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + G++ EA   F  + +  L P    Y  ++  + + G   KA  L  EM+SEG +P 
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPD 541



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 158/347 (45%), Gaps = 1/347 (0%)

Query: 29   LIHVVTKSDRNDLVWRIYQHMLENI-RYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
            LI V+ K  +     +++    +++  +P   +   L+  L      +  + +   +   
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 88   RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
             C P +     L+    + +RI+E   L   ML +    + I +++I+ A VK  ++  A
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 148  LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
            L +Y E++   FS     Y   IG   + G+ EEA  + +EM +   KP    +N+LI G
Sbjct: 878  LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937

Query: 208  CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
              KA  +  +    ++M+   + P   ++  ++  L   G    A          G  P+
Sbjct: 938  FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997

Query: 268  EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
             ++Y+ +I G  K   ++E L L+ EM+ + ISP L  Y +LI      G +++A K F+
Sbjct: 998  TVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFE 1057

Query: 328  IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             ++   L P V  Y +L+  H + GNK +A  + ++M+  G  P+  
Sbjct: 1058 ELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAG 1104



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 137/305 (44%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E A  +   ++  G   ++ ++N L+    KS R D ++ +Y  ML     PN  T   +
Sbjct: 805  EAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNII 864

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            ISAL K   +   +D+   I     SP       LI  +++  R EE M + + M     
Sbjct: 865  ISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC 924

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +   Y++++    K  N+  A  +++ M+K G   +   YT  +      G++++A  
Sbjct: 925  KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVH 984

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
              +E++  GL P   ++NL+I G  K++R+EE+LS   +M +R + P    +N +I    
Sbjct: 985  YFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFG 1044

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              G   QA  M       G  PN  TY+ LI G++K G       ++ +M     SP   
Sbjct: 1045 NAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAG 1104

Query: 305  AYTSL 309
             +  L
Sbjct: 1105 TFAQL 1109



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 153/339 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ + + +E  G    ++++  LI  +  + + D    +Y  M  +   P+  T  TL+S
Sbjct: 281 AYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMS 340

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L+T       +     +P V+  T L+  + +  ++++   +L  M  + ++ 
Sbjct: 341 KFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVP 400

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ ++   + +R L+ AL ++  M   G +  ++ Y  FI  Y + G  E+A    
Sbjct: 401 NLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTF 460

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M+  G+ P     N  +   A+  RI E+      + +  L P    +N M++   + 
Sbjct: 461 EKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKA 520

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +LT  L +G  P+ I  + LI    K G + E  +++  ++   ++PT+  Y
Sbjct: 521 GQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTY 580

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             LI+ L + GKL +A   F  MK     P    + +L+
Sbjct: 581 NILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 154/356 (43%), Gaps = 3/356 (0%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S  ++++NT+I+ + K  R    +  Y H ++    P+  T+ TL+  + K G+++  + 
Sbjct: 644 SPDVLTYNTIIYGLIKEGRAGYAFWFY-HQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIK 702

Query: 80  M-LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           + ++ +H         V   L+  I+ E  IEE +   + ++  ++  D      ++   
Sbjct: 703 IVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVL 762

Query: 139 VKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            K +    A  ++++  K  G       Y   +         E A  L  EM+NAG  P 
Sbjct: 763 CKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPN 822

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+NLL++   K+KRI+E      +M+ R   P+    N +I  L +  +  +A  +  
Sbjct: 823 IFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYY 882

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +   FSP   TY  LIGG  K G  +E +K++ EM      P    Y  LI+   + G
Sbjct: 883 EIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAG 942

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  A   FK M    + P +  Y  LV      G    A+H  EE+   GL P T
Sbjct: 943 NVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDT 998



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 170/389 (43%), Gaps = 40/389 (10%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I  N+LI  + K+ R D  W+++  + +    P   T   LI+ L K G+L   +D+ 
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +    C P  +   +L+  + + + ++  + +  RM   N   D + Y+ I+Y  +K 
Sbjct: 601 GSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKE 660

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDET 200
                A   Y +M K+  S +     T +    + G++E+A   +M+ +  +GL+  ++ 
Sbjct: 661 GRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQV 719

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMM--------------------------SRKLL---- 230
           +  L+E       IEE++S+ E ++                          ++KL     
Sbjct: 720 WGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFT 779

Query: 231 ------PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                 P+  ++N ++  L  C   + A  +     + G  PN  TY+ L+  + K   I
Sbjct: 780 KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI 839

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYES 343
            E+ +LY EM  +   P +  +  +IS+L +   + +A D Y++I+ S    P    Y  
Sbjct: 840 DELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEII-SGDFSPTPCTYGP 898

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+G  L+ G   +A+ + EEM     KP+
Sbjct: 899 LIGGLLKAGRSEEAMKIFEEMPDYQCKPN 927



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 14/345 (4%)

Query: 41  LVWRIYQHMLENIRYPNEATIRTLISALC-KGGQLQTYVDMLDRIHGKRCSPMVIVN--- 96
            V+ + Q  + N R PN  T  T+  AL  KGG  Q    +     GK      ++N   
Sbjct: 143 FVFDLMQKQVIN-RNPN--TYLTIFKALSIKGGIRQAPFAL-----GKMRQAGFVLNAYS 194

Query: 97  -TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
              LI  ++Q    +E + + KRM+ + +      YS ++ A  + R+  + + + EEM 
Sbjct: 195 YNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME 254

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
             G   N + YT  I      G+I++A  +++ ME+ G  P   T+ +LI+    A +++
Sbjct: 255 TLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLD 314

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           ++     +M +    P    +  ++ +    G+ +      +     G++P+ +TY+ L+
Sbjct: 315 KAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILV 374

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
               K G++ +   +   M  + I P L  Y +LIS L    +L+EA + F  M+S  + 
Sbjct: 375 EALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVA 434

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAS 380
           P    Y   +  + + G+  KAL   E+M   G+ PS +  C+AS
Sbjct: 435 PTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIA-ACNAS 478



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/320 (20%), Positives = 141/320 (44%)

Query: 25   SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
            S+N L+  +   +  +   +++  M      PN  T   L+ A  K  ++    ++ + +
Sbjct: 790  SYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEM 849

Query: 85   HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              + C P +I +  +I  +++   I + + L   ++  +       Y  ++   +K    
Sbjct: 850  LCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRS 909

Query: 145  ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
            E A+ ++EEM       N  +Y   I  + + G +  A  L + M   G++P  +++ +L
Sbjct: 910  EEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTIL 969

Query: 205  IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
            +E      R+++++ Y E++    L P   ++N MI  L +    ++A  + +   ++G 
Sbjct: 970  VECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGI 1029

Query: 265  SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            SP   TY+ LI  +   G + +  K++ E+++  + P +  Y +LI    + G  + A  
Sbjct: 1030 SPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFS 1089

Query: 325  YFKIMKSHSLVPGVDIYESL 344
             FK M      P    +  L
Sbjct: 1090 VFKKMMIVGCSPNAGTFAQL 1109



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 2/266 (0%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN-LESALVVYEEMLKRGFSANSFVY 166
           R+E+ M  +  +++K +I+      L ++  + ++  +  A     +M + GF  N++ Y
Sbjct: 137 RVED-MAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              I    + G  +EA  + + M + GLKP  +T++ L+    + +     +   E+M +
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMET 255

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
             L P+   +   IR L   G    A G+L    D+G  P+ +TY+ LI      G++ +
Sbjct: 256 LGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDK 315

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             +LY +M   S  P L  Y +L+S     G LE   +++  M++    P V  Y  LV 
Sbjct: 316 AKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVE 375

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              + G   +A  + + M   G+ P+
Sbjct: 376 ALCKSGKVDQAFDMLDVMRVRGIVPN 401



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/327 (19%), Positives = 128/327 (39%), Gaps = 36/327 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   +  RG   +L ++NTLI  +    R D    ++ +M      P   +    I 
Sbjct: 386 AFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFID 445

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G  +  +D  +++  +   P +    + +  + +  RI E   +   +    +  
Sbjct: 446 YYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSP 505

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA---- 182
           D++ Y++++    K   ++ A  +  EML  G   +  V  + I    + G+++EA    
Sbjct: 506 DSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMF 565

Query: 183 ---------------NCLMQ----------------EMENAGLKPYDETFNLLIEGCAKA 211
                          N L+                  M+ +G  P   TFN L++   K 
Sbjct: 566 GRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKN 625

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             ++ +L    +M      P    +N +I  L + G A  A       + K  SP+ +T 
Sbjct: 626 DAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYH-QMKKFLSPDHVTL 684

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKS 298
             L+ G  K+G +++ +K+  E  ++S
Sbjct: 685 YTLLPGVVKDGRVEDAIKIVMEFVHQS 711



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 83/197 (42%)

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +G++E+   +   M+   +     T+  + +  +    I ++     +M     + +  +
Sbjct: 135 HGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYS 194

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I  L + G  K+A  +    + +G  P+  TYS L+    +  +   ++ L  EME
Sbjct: 195 YNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEME 254

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P +  YT  I  L + G++++A    K M+     P V  Y  L+      G   
Sbjct: 255 TLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLD 314

Query: 356 KALHLCEEMVSEGLKPS 372
           KA  L  +M +   KP 
Sbjct: 315 KAKELYTKMRASSHKPD 331



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/217 (18%), Positives = 86/217 (39%), Gaps = 35/217 (16%)

Query: 26   FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
            +N LI+   K+   ++   +++ M++    P+  +   L+  L   G++   V   + + 
Sbjct: 931  YNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELK 990

Query: 86   GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                 P  +    +I  + +  R+EE                                  
Sbjct: 991  LTGLDPDTVSYNLMINGLGKSRRLEE---------------------------------- 1016

Query: 146  SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
             AL ++ EM  RG S   + Y   I  +   G +++A  + +E++  GL+P   T+N LI
Sbjct: 1017 -ALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALI 1075

Query: 206  EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             G +K+   + + S  ++MM     P+   F ++  +
Sbjct: 1076 RGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 2/176 (1%)

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-SCSAFNEMIRRLCECGNAKQANGMLT 257
           ET N ++E      R+E+ +++   +M ++++  + + +  + + L   G  +QA   L 
Sbjct: 123 ETCNYMLEFLRVHGRVED-MAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALG 181

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                GF  N  +Y+ LI    + G  +E LK+Y  M  + + P++  Y++L+ +L +  
Sbjct: 182 KMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRR 241

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                    + M++  L P +  Y   + +    G    A  + + M  EG  P  
Sbjct: 242 DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDV 297


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 178/403 (44%), Gaps = 39/403 (9%)

Query: 9   DVCRYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRT 63
           D+C   E   Q G   S++++NTL+    K  R D V  + + M        PN+ T   
Sbjct: 187 DICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNV 246

Query: 64  LISALCKGGQLQ------------------TYVDMLDRIHGKRCS--------------- 90
           +I+ L + G L+                  TY  ++  +  + C                
Sbjct: 247 VITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGI 306

Query: 91  -PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
            P V+   ++I  ++Q   +E   V    M    ++ D I Y+ ++    K  NL+ AL+
Sbjct: 307 MPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALL 366

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++ ++ + G +     Y   I  YC  G +EEA  L +EM   G  P   T+ +L++G  
Sbjct: 367 LFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSL 426

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
               +  +  + ++M+S+ L P C A+N  I      G+  +A  +  + + +G S + +
Sbjct: 427 NVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTV 486

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ LI G  K G +++  +L  +M    + P    YT LI + C+ G L EA K F  M
Sbjct: 487 TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 546

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            S  L+P    +  ++  +  +GN   A     +M+ EG++P+
Sbjct: 547 ISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPN 589



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 167/377 (44%), Gaps = 2/377 (0%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           +D+   +E  G   +++++N +IH + +S   +     +  M      P+  T  +L++ 
Sbjct: 295 YDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG 354

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK G L+  + +   +     +P V+     I    +   +EE  +L + M  +  + +
Sbjct: 355 YCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPN 414

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
              Y++++   + + +L  A   ++EML +G   + F Y T I A    G I  A  L +
Sbjct: 415 VCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELRE 474

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            +   G+     T+N+LI G  K   ++++     +M+S  L P C  +  +I   CE G
Sbjct: 475 VLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG 534

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             ++A  +    +  G  P+ +T++ +I  Y + G +      + +M  + + P    Y 
Sbjct: 535 LLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 594

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            LI +LC+ G+ + A  +F  M    LV     Y  L+  + + GN   A+    EM   
Sbjct: 595 VLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQN 654

Query: 368 GLKPSTSYLCSASTCRG 384
           G+ P   YL   +  +G
Sbjct: 655 GIHP--DYLTHKALVKG 669



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 5/228 (2%)

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L  + EM   G + +       + A  +  + ++   + +EM   G++P   T+N L++ 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 208 CAKAKRIEESLSYCEQMMSR--KLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGF 264
             K  R ++     ++M +R    LP+   +N +I  L   G+ ++A  ++  + L K  
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           S    TY+ LI G    G +++V  L  EME + I PT+  Y ++I  L Q G +E A  
Sbjct: 274 S--SFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 331

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            F  M++  L+P V  Y SL+  + + GN  +AL L  ++   GL P+
Sbjct: 332 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPT 379



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 2/191 (1%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI  + +   +++   L  +M+   +  D I Y+ +++A  +   L  A  ++  M+  G
Sbjct: 491 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 550

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              ++  +T  I AYC  G +  A    ++M   G++P + T+N+LI    +  R + + 
Sbjct: 551 LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAS 610

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            +  +M+ R L+ +   +  +I   C+ GN + A          G  P+ +T+  L+ G+
Sbjct: 611 HHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670

Query: 279 AKEGEIQEVLK 289
             +G +   ++
Sbjct: 671 --DGHVHHTIE 679


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 182/370 (49%), Gaps = 3/370 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A DV   + ++G+   +I++++LI  ++K+ R D   ++   M+     P      ++
Sbjct: 215 ERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSI 274

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++ LCK G++Q  V  +  +  +R  P V   + ++   I   ++E+   +++ M  ++ 
Sbjct: 275 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDC 334

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DTI+Y++ + A   +   E A  V+E M+++G   +   Y   I  +C+ G +  A  
Sbjct: 335 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 394

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ M+ A +KP    + ++++G  K+ R+EE+L   ++++   +LPS   +N +I  LC
Sbjct: 395 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 454

Query: 245 ECGNAKQANGMLTLALDKG--FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           +     +A  +L     +     P+ +TYS +I G  K G  +    L  EM    + P 
Sbjct: 455 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD 514

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YTSLI +L   GK+  A +  + M    + P    Y +LV I L + +   A  L +
Sbjct: 515 CFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQI-LCRSDVDAAWDLLQ 573

Query: 363 EMVSEGLKPS 372
           EM+  G  P+
Sbjct: 574 EMMRNGHTPN 583



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 2/350 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           SFN L+      D  ++V  + + M       N AT   ++SALC    L   V   + +
Sbjct: 130 SFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSV 189

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +C P +   T L+  + +  ++E    + + M+RK    D IAYS ++    K   +
Sbjct: 190 SPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRV 249

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  + + M+ RG    +  YT+ +   C+ G+I+EA   +QEM    L+P  +T++ +
Sbjct: 250 DEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFI 309

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G     ++E++ +  E+M  R   P   ++   I  L   G  ++A  +    ++KG 
Sbjct: 310 VTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGC 369

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  TY  +I  + KEG +     +   M+  ++ P    YT ++    +  +LEEA +
Sbjct: 370 KPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALE 429

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV--SEGLKPS 372
            ++ +    ++P    Y +++    +     +AL L  EM    E L+PS
Sbjct: 430 LYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPS 479



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 3/253 (1%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R    H     + ++ A V+  +L  AL  ++  +      N   +   +  +      E
Sbjct: 89  RPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFE 145

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
             N L++EM++ G+     T  +++      + +++++SY   +   K  P+   +  ++
Sbjct: 146 VVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLV 205

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+    ++A  +    + KG+ P+ I YS LI G +K G + E  KL   M  +   
Sbjct: 206 DGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPP 265

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           PT  AYTS+++ LC+CG+++EA K  + M+   L P VD Y  +V  ++  G   KA  +
Sbjct: 266 PTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAV 325

Query: 361 CEEMVSEGLKPST 373
            EEM      P T
Sbjct: 326 MEEMADRDCAPDT 338


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 184/404 (45%), Gaps = 47/404 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G    +IS+ TLIH    S + +    ++  ML+    P+  T   LI  LCK G+
Sbjct: 484 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-------------- 119
           +     +L+ +  + C   V+  T+L+  +  + RI +   L  +M              
Sbjct: 544 VIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 603

Query: 120 ----------------LRKNMIHDT-----------IAYSLIVYAKVKMRNLESALVVYE 152
                           L KNM+ DT           I+YS+I+    K    + A  +++
Sbjct: 604 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 663

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
           EM   G   +   YT+ I  +C  GK ++A  L  EM + G++P   TF++LI+   K  
Sbjct: 664 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 723

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           ++ E+    E M+ R  +P+   +  +++ LC      +A  +       G  P+ +TY 
Sbjct: 724 KVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYG 783

Query: 273 HLIGGYAKEGEIQEVLKLYYEM-----EYKS-ISPTLPAYTSLISSLCQCGKLEEADKYF 326
            L+ G  + G I+  L+L+ +M     +Y +   P + +Y+ +I  LC+ G+ +EA + F
Sbjct: 784 TLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF 843

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           K MK+  ++P V  Y SL+      G    A HL  EMV +G++
Sbjct: 844 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 887



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 163/355 (45%), Gaps = 12/355 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           QRG  L +++  TL+  +    R     +++  M +    PN  T  TL+  LC+ G   
Sbjct: 556 QRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIK 615

Query: 74  --LQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             L+ + +ML     +G  C P  I  + +I  + +  R +E   L K M    +I D I
Sbjct: 616 IALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVI 675

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +Y+ +++   +    + A  ++ EM+  G   +   ++  I   C+ GK+ EAN L++ M
Sbjct: 676 SYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVM 735

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G  P   T+  L++G     RI E+     +M     LP    +  +++ LC+ GN 
Sbjct: 736 IQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNI 795

Query: 250 KQA----NGMLTLALDKG--FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           K A      ML+     G  F P+ I+YS +I G  K G   E  +L+ EM+   + P +
Sbjct: 796 KTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNV 855

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            +YTSLI   C+ GKLE+A   F  M    +      Y  ++    ++G   KAL
Sbjct: 856 ISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 12/370 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           QRG  L +++++TLI  +    R      ++  M +    P+  T  TL+  LC+ G   
Sbjct: 375 QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNIN 434

Query: 74  --LQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             LQ + +ML+    +G +C P +I  + +I  + ++ R +E   L + M  + ++ D I
Sbjct: 435 IALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVI 494

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +Y+ +++        E A  ++ EML  G   +    +  I   C+ GK+ EAN L++ +
Sbjct: 495 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 554

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G      T   L++G     RI ++     +M     +P+      +++ LC+ GN 
Sbjct: 555 IQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI 614

Query: 250 KQA----NGMLTLALDKGFS--PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           K A      ML+     G +  PN I+YS +I G  K G   E  +L+ EM+   + P +
Sbjct: 615 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDV 674

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            +YTSLI   C+ GK ++A   F  M    + P V  +  L+ +  ++G   +A  L E 
Sbjct: 675 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 734

Query: 364 MVSEGLKPST 373
           M+  G  P+T
Sbjct: 735 MIQRGCIPNT 744



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 164/366 (44%), Gaps = 13/366 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +LIS++ +I  + K  R D    +++ M      P+  +  +LI   C  G+ +    + 
Sbjct: 164 TLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLF 223

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +      P V  +  LI    +E ++ E   LL+ M+ +  I D + YS ++      
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMK 283

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-------L 194
             +  A  ++  M K G   ++  Y T +   C+ GKI  A  L QEM N         +
Sbjct: 284 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI 343

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   T ++LI+   K  ++ E+    E M+ R  +     ++ +I+ LC      +A  
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 403

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS------ISPTLPAYTS 308
           +       G  P+ ITY  L+ G  + G I   L+L+ EM   +        PTL +Y+ 
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I  LC+  + +EA + F+ MK+  ++P V  Y +L+      G   KA  L  EM+  G
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 369 LKPSTS 374
           ++P  +
Sbjct: 524 IQPDVT 529



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 165/360 (45%), Gaps = 6/360 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +LIS++ +I  + K  R D    +++ M      P+  +  TLI   C  G+ +    + 
Sbjct: 457 TLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 516

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +      P V  ++ LI  + ++ ++ E   LL+ ++++  I D +  + +V      
Sbjct: 517 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMK 576

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN------AGLK 195
             +  A  ++ +M K G   N     T +   C+ G I+ A  L + M +         K
Sbjct: 577 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 636

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   +++++I+G  K  R +E+    ++M +  ++P   ++  +I   C  G  K A  +
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +D G  P+  T+S LI    KEG++ E  +L   M  +   P    YT+L+  LC 
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
             ++ EA + F  M+    +P V  Y +L+    + GN   AL L ++M+S+  +  T++
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 816



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 165/375 (44%), Gaps = 13/375 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + ++ +G    +IS+ +LIH    S + +    ++  ML+    P+  T   LI 
Sbjct: 184 ARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLID 243

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G++    ++L+ +  + C   ++  ++LI  +  + RI E   L   M +     
Sbjct: 244 MFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRP 303

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLK-------RGFSANSFVYTTFIGAYCEYGKI 179
           D IAY  ++    +   +  AL +++EML        +    +    +  I   C+ GK+
Sbjct: 304 DAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKV 363

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            EAN L++ M   G      T++ LI+G     RI E+      M      P    +  +
Sbjct: 364 IEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTL 423

Query: 240 IRRLCECGNAKQA----NGMLTLALDKGF--SPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           ++ LC+ GN   A      ML      G    P  I+YS +I G  K+    E  +L+ E
Sbjct: 424 MKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEE 483

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+ + I P + +YT+LI   C  GK E+A   F  M    + P V     L+ +  +KG 
Sbjct: 484 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543

Query: 354 KAKALHLCEEMVSEG 368
             +A  L E ++  G
Sbjct: 544 VIEANKLLEVVIQRG 558



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 48/343 (13%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           QRG  L +++++TLI  +    R      ++  M +    P+  T  TL+  LC+ G   
Sbjct: 82  QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNIN 141

Query: 74  --LQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             LQ + +ML+    +G +C P +I                                   
Sbjct: 142 IALQLHQEMLNDTGRYGIKCKPTLI----------------------------------- 166

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +YS+I+    K R  + A  +++EM  +G   +   YT+ I  +C  GK E+A CL  EM
Sbjct: 167 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEM 226

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            + G++P   T  +LI+   K  ++ E+    E M+ R  +     ++ +I+ LC     
Sbjct: 227 LDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRI 286

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-----EY--KSISPT 302
            +A  +       G  P+ I Y  L+ G  + G+I   L L+ EM     +Y  K I P 
Sbjct: 287 SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPD 346

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +   + LI  LC+ GK+ EA++  ++M     +  +  Y +L+
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI 389



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 136/295 (46%), Gaps = 43/295 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + ++  G    +IS+ +LIH   +S +      ++  M++    P+  T   LI 
Sbjct: 658 ARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 717

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G++    ++L+ +  + C P  +  T+L+  +   +RI E   L  +M +   + 
Sbjct: 718 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 777

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLK------RGFSANSFVYTTFIGAYCEYGKIE 180
           D + Y  ++    +  N+++AL ++++ML         F  +   Y+  I   C++G+ +
Sbjct: 778 DVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRED 837

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L +EM+  G+ P   ++  LI G  ++ ++E++                  FNEM+
Sbjct: 838 EARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHL---------------FNEMV 882

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
                               D+G   N +TYS +I G+ KEG+I +   L+ +ME
Sbjct: 883 --------------------DQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKME 915



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 50/311 (16%)

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAY---------SLIVYAKVKMRNLESALVVYEEMLKR 157
           +R+ EG+  +  ++R+  I D + Y         S+++    K   +  A  + E M++R
Sbjct: 24  KRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQR 83

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP--------------------- 196
           G   +   Y+T I   C   +I EA  L   M+  G +P                     
Sbjct: 84  GCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIA 143

Query: 197 ---YDETFN-----------------LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
              + E  N                 ++I+G  K +R +E+    ++M ++ ++P   ++
Sbjct: 144 LQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISY 203

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             +I   C  G  ++A  +    LD G  P+  T   LI  + KEG++ E  +L   M +
Sbjct: 204 TSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVH 263

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           +     +  Y++LI  LC   ++ EA + F  MK     P    Y +L+    + G    
Sbjct: 264 RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINI 323

Query: 357 ALHLCEEMVSE 367
           ALHL +EM+++
Sbjct: 324 ALHLHQEMLND 334



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 15/232 (6%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG---------LKPYDETFNLLIEGC 208
           G   +SF +   I   C   ++ E    M  +   G         ++P   T ++LI+  
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K  ++ E+    E M+ R  +     ++ +I+ LC      +A  +       G  P+ 
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKS------ISPTLPAYTSLISSLCQCGKLEEA 322
           ITY  L+ G  + G I   L+L+ EM   +        PTL +Y+ +I  LC+  + +EA
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            + FK MK+  ++P V  Y SL+      G   KA  L  EM+  G++P  +
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVT 236


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 157/333 (47%), Gaps = 38/333 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG   + +SFNTLI+ + KS   D  +R+ + M EN  YP+  T   LI  LCK G+
Sbjct: 249 IRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML------------- 120
           L     + D +  +   P  I  T+LI    +  RI+  M    +ML             
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNT 368

Query: 121 --------------RK--------NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
                         RK         M  D I Y+ ++    K  +LESA+ + + M + G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              ++  +T  I  +C  G++ +A   ++EM  AG+KP D T+ ++I+G  K   ++   
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              ++M      P    +N ++  LC+ G  K AN +L   L+ G +P++ITY+ L+ G+
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            K G+ +++LKL  E   K +      YTSL+S
Sbjct: 549 CKNGKAEDLLKLRNE---KGLIVDYAYYTSLVS 578



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 144/281 (51%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V     LI +  +E  I +  ++   + ++ +   T++++ ++    K RNL+    +
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
            + M +     + F Y+  I   C+ G+++ A  L  EM+  GL+P   TF  LI+G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           ++RI+ +++   QM++  + P    +N ++  LC+ G+  +A  ++      G  P++IT
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI GY KEG+++  +++   M  + +     A+T+LIS  C+ G++ +A++  + M 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              + P    Y  ++  + +KGN      L +EM   G KP
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 156/346 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   +  +N LI+   K         I+  + +    P   +  TLI+ LCK   L   
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +   +   R  P V   + LI  + +E R++    L   M ++ +  + I ++ ++  
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
           + + R ++SA+  Y +ML  G   +  +Y T +   C+ G + +A  L+ EM   G+KP 
Sbjct: 338 QCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPD 397

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  K   +E ++   + M    ++    AF  +I   C  G  + A   L 
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             ++ G  P++ TY+ +I GY K+G ++   KL  EM+     P +  Y  L++ LC+ G
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
           +++ A+   + M +  + P    Y  L+  H + G     L L  E
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 160/369 (43%), Gaps = 15/369 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F++ F  C YL  +     +I+ N+ +           +W  Y  +LE    P       
Sbjct: 184 FQIPFHGCGYLLDK-----MINSNSPV----------TIWTFYSEILEYGFPPKVQYYNI 228

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK G ++    + + I  +   P  +   +LI  + +   ++EG  L K M    
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS++++   K   L+ A  +++EM +RG   N   +T  I   C   +I+ A 
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAM 348

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
               +M   G+KP    +N L+ G  K   + ++    ++M    + P    +  +I   
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGY 408

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ + A  +     ++G   + + ++ LI G+ ++G +++  +   EM    + P  
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT +I   C+ G ++   K  K M+ +   PGV  Y  L+    ++G    A  L E 
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528

Query: 364 MVSEGLKPS 372
           M++ G+ P 
Sbjct: 529 MLNLGVTPD 537


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 176/368 (47%), Gaps = 1/368 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +++ G   +L+  NT IHV+  +++ +   R  + M      PN  T   LI 
Sbjct: 190 AMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIK 249

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-MI 125
             C   Q++  ++++  +  K C P  +   +++  + Q++RI+E   L+++M++ N + 
Sbjct: 250 GYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLF 309

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ +V+   K  + + AL    E  +RGF  +   Y+  + ++C  G+++ A  +
Sbjct: 310 PDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEI 369

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM   G  P   T+  ++ G  K  ++EE+    +QM      P+  ++  ++  LC+
Sbjct: 370 VNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQ 429

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN+ +A  M+  + +  ++PN ITYS ++ G  +EG++ E   +  EM  K   PT   
Sbjct: 430 HGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVE 489

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
              LI SLC   K+ EA K+ +   +         + +++    +  N   AL L ++M 
Sbjct: 490 INLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMY 549

Query: 366 SEGLKPST 373
                P  
Sbjct: 550 LNNKHPDA 557



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 153/366 (41%), Gaps = 2/366 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  R  E+RGF +  + ++ +++      R D    I   M+     P+  T   +++
Sbjct: 331 ALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVN 390

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+++    ML +++   C P  +  T+L+  + Q     E   ++          
Sbjct: 391 GLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTP 450

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS++++   +   L  A  V  EML +GF          I + C   K+ EA   M
Sbjct: 451 NAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFM 510

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E  N G       F  +I G  ++  I+ +LS  + M      P    F  +I  L + 
Sbjct: 511 EECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKK 570

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A       L KG  P  +TY  +I  Y K G ++E++KL  +M  +S   T  AY
Sbjct: 571 GRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRT--AY 628

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I  LC  G  E ADK   ++   +     +    L+  +L KG    A  +   M  
Sbjct: 629 NQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFD 688

Query: 367 EGLKPS 372
             L P 
Sbjct: 689 RNLIPD 694



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 151/320 (47%), Gaps = 3/320 (0%)

Query: 54  RYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           R P EA    ++S   + G+L+  + +L  +      P +++  + I  ++   ++E+ +
Sbjct: 169 RRP-EAFAHVMVS-YSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKAL 226

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
             L+RM    +  + + Y+ ++     +  +E A+ +  EM  +G   +   Y T +G  
Sbjct: 227 RFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFL 286

Query: 174 CEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           C+  +I+E   LM++M ++  L P   T+N L+   +K    +E+L +  +   R     
Sbjct: 287 CQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVD 346

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              ++ ++   C  G   +A  ++   + KG SP+ +TY+ ++ G  K G+++E  K+  
Sbjct: 347 KVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQ 406

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +M      P   +YT+L++ LCQ G   EA +     +     P    Y  ++     +G
Sbjct: 407 QMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREG 466

Query: 353 NKAKALHLCEEMVSEGLKPS 372
             ++A  +  EM+++G  P+
Sbjct: 467 KLSEACDVVREMLTKGFFPT 486



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 5/249 (2%)

Query: 127 DTIAYSLIVYAKV-KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           +  A+ ++ Y++  K+RN   A+ V   M K G   N  +  T I       K+E+A   
Sbjct: 172 EAFAHVMVSYSRAGKLRN---AMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRF 228

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++ M+  G+ P   T+N LI+G     ++E ++    +M  +   P   ++  ++  LC+
Sbjct: 229 LERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQ 288

Query: 246 CGNAKQA-NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
               K+  N M  +  D    P+++TY+ L+   +K G   E L+   E E +       
Sbjct: 289 DKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKV 348

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+++++S C  G+++ A +    M +    P V  Y ++V    + G   +A  + ++M
Sbjct: 349 GYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQM 408

Query: 365 VSEGLKPST 373
              G KP+T
Sbjct: 409 YKHGCKPNT 417



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 115/249 (46%), Gaps = 1/249 (0%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           HD I Y +++    K +  + A  V   M++RG +     +   + +Y   GK+  A  +
Sbjct: 134 HDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQV 193

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M+ AG++P     N  I     A ++E++L + E+M    + P+   +N +I+  C+
Sbjct: 194 LTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCD 253

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLP 304
               + A  ++     KG  P++++Y  ++G   ++  I+EV  L  +M +   + P   
Sbjct: 254 LYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQV 313

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +L+  L + G  +EA ++ +  +          Y ++V     +G   +A  +  EM
Sbjct: 314 TYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEM 373

Query: 365 VSEGLKPST 373
           +++G  P  
Sbjct: 374 ITKGCSPDV 382


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 160/352 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S + +++ ++I      ++ +   ++   M++N   P+  T   +ISALCK   ++  
Sbjct: 318 GVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQA 377

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L ++    C P +    +LI  +    R EE + L+  M +  +  +   Y+++ + 
Sbjct: 378 YGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHG 437

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+R L+ A  ++ E L RG   N   Y T +  YC   ++ EA  +++EM      P 
Sbjct: 438 LCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPD 497

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  +  ++ ++L   ++M ++    +    N + R L   GN K A+    
Sbjct: 498 HVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYR 557

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+GF+ +   Y   I   +  GE++E   L YEM  K  SP L  Y ++I   C+ G
Sbjct: 558 RMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQG 617

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +L++AD     M  + + P    Y  L+     +G    A  L    +  G+
Sbjct: 618 RLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGV 669



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 145/319 (45%), Gaps = 1/319 (0%)

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
           +    +++ +L K  +L    ++  ++     S   +  TS+I     +E++E+ M LL 
Sbjct: 288 DTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLD 347

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M++ N   D + Y++++ A  K + +E A  V ++M + G   N + Y   I   C   
Sbjct: 348 DMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVR 407

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           + EEA  L+  ME  G+ P   T+ +L  G  K +R++ +     + ++R L P+   +N
Sbjct: 408 RPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYN 467

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++   C      +A  +L        +P+ +TY+ LI G  +  ++ + L+++ EME K
Sbjct: 468 TLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENK 527

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
                      L   L + G  ++A  +++ MK          Y   +      G   +A
Sbjct: 528 GYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEA 587

Query: 358 LHLCEEMVSEGLKPS-TSY 375
             L  EM+++G  P+ T+Y
Sbjct: 588 QALLYEMINKGYSPNLTTY 606



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/376 (21%), Positives = 165/376 (43%), Gaps = 8/376 (2%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R F+ A       +Q G+  +  ++ T+I ++ ++     +  + Q M    R    + 
Sbjct: 200 LRFFQWAD------KQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSM 253

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN--TSLILRIIQEERIEEGMVLLKR 118
           + + + +  + G+ +  ++  + +      P +I     S+++ +++ ++++    L  +
Sbjct: 254 LHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQ 313

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+   +  + + Y+ ++        +E A+ + ++M++  ++ +   YT  I A C+   
Sbjct: 314 MINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKM 373

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           IE+A  ++Q+M   G +P   T+N LI+G    +R EE+L     M    + P+   +  
Sbjct: 374 IEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTI 433

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +   LC+     +A  M   AL +G  PN +TY+ L+ GY +   + E + +  EM    
Sbjct: 434 LTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQND 493

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            +P    YT+LI  L Q  +L +A +    M++       D    L       GN   A 
Sbjct: 494 CTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDAS 553

Query: 359 HLCEEMVSEGLKPSTS 374
                M   G   S S
Sbjct: 554 IFYRRMKDRGFAYSAS 569


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 180/369 (48%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF +   L +     ++ ++N L++ + K+       R+   M +    PNE T   L
Sbjct: 319 EEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAIL 378

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I +LCK G +   + MLDR+  K     V    SLI    +++ ++  M  L  M+   +
Sbjct: 379 IHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGL 438

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +  +YS ++    +  +L  A+ ++ +M ++G + N++ +T  I  +C+  K++EA+ 
Sbjct: 439 TPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASR 498

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  +M  + L+P + TFN +IEG      I ++    +QMM R L P    +  +I  LC
Sbjct: 499 LFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLC 558

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
               A +A   +    +     N+ + + L+ G+ +EG + E   ++ EM        L 
Sbjct: 559 LTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLI 618

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           ++T ++ +  +    E++   F+ MK   + P    +  ++ ++ ++GN  +AL+  +EM
Sbjct: 619 SFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEM 678

Query: 365 VSEGLKPST 373
           +++G  P+T
Sbjct: 679 IADGHLPNT 687



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 176/401 (43%), Gaps = 36/401 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + ++G + +  +F  LI+   K+ + D   R++  M E+   PNE T   +I 
Sbjct: 461 AVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIE 520

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSP-------------------------------MVIV 95
             C  G ++    + D++  +  +P                                 ++
Sbjct: 521 GYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVL 580

Query: 96  N----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
           N    T+L+    +E R+ E   +   M       D I++++IVYA +K  + E + V++
Sbjct: 581 NKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLF 640

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM ++G   ++  +T  I  Y + G + +A     EM   G  P   T+  L+    K+
Sbjct: 641 REMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKS 700

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             +  +   C++M++   LP+   FN  +      GN + A   L  A+ +GF  N ++ 
Sbjct: 701 WHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKD-LYFAMLQGFLANIVSV 759

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI G+ K G+IQE + L          P   +Y+++I  LC+ G + EA + +  M  
Sbjct: 760 NTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLY 819

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + P +  Y  L+      G   K L +  +MV +G++P+
Sbjct: 820 KGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPN 860



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 161/346 (46%), Gaps = 4/346 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G  +S + +N LI+ + K+ R      +   ML      +E T RTL+   C+  +
Sbjct: 223 MQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEE 282

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE-RIEEGMVLLKRMLRKNMIHDTIAYS 132
           L   ++M   +      P    N S +L  ++++ R+EE   L  ++    M+ +  AY+
Sbjct: 283 LDMALEMTGDMARLGFVPSE-ANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYN 341

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K      A  +  EM  +G   N   Y   I + C+ G +++A C++  M   
Sbjct: 342 ALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREK 401

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G++     +N LI  C K   ++ ++ +  +M+   L P+ ++++ +I  LC  G+   A
Sbjct: 402 GVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGA 461

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +     +KG + N  T++ LI G+ K  ++ E  +L+ +M   ++ P    + ++I  
Sbjct: 462 VELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEG 521

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKG-NKAK 356
            C  G + +A + +  M    L P    Y SL+ G+ L  G +KAK
Sbjct: 522 YCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAK 567



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 149/311 (47%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI  LCK  +++  VD+ + +  +  +   +   +L+    + E ++  + +   M R 
Sbjct: 237 VLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARL 296

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             +      S ++    K   +E A  +  ++ +     N F Y   +   C+ G   EA
Sbjct: 297 GFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEA 356

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L+ EM + GL+P + T+ +LI    K   ++++L   ++M  + +  +   +N +I  
Sbjct: 357 DRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINC 416

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+  +   A G L+  ++ G +PN  +YS +I G  ++G++   ++L+ +M  K ++  
Sbjct: 417 CCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWN 476

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              +T+LI+  C+  K++EA + F  M   +L P    + +++  +   G+  KA  L +
Sbjct: 477 TYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYD 536

Query: 363 EMVSEGLKPST 373
           +M+  GL P  
Sbjct: 537 QMMCRGLTPDN 547



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 125/259 (48%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           L+ RM  +      + Y++++Y   K + +  A+ V   ML RG +A+     T +  +C
Sbjct: 219 LVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFC 278

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
              +++ A  +  +M   G  P +   + +++G  K  R+EE+     Q+   +++P+  
Sbjct: 279 RTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIF 338

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           A+N ++  +C+ G   +A+ ++    DKG  PNE+TY+ LI    K G + + L +   M
Sbjct: 339 AYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRM 398

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             K +  T+  Y SLI+  C+   L+ A  +   M    L P    Y  ++     KG+ 
Sbjct: 399 REKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDL 458

Query: 355 AKALHLCEEMVSEGLKPST 373
           + A+ L  +M  +G+  +T
Sbjct: 459 SGAVELHRKMAEKGVAWNT 477



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 117/251 (46%)

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L   +  D    S I+++ VK+R    A  +++ ML  G   + +VYT  I AYCE   +
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           + A  L+  M++ G K     +N+LI G  K +R+ E++     M++R +         +
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           +   C       A  M       GF P+E   S ++ G  K+G ++E  +L  ++    +
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P + AY +L++++C+ G   EAD+    M    L P    Y  L+    ++G    AL 
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 360 LCEEMVSEGLK 370
           + + M  +G++
Sbjct: 394 MLDRMREKGVR 404



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/338 (20%), Positives = 133/338 (39%), Gaps = 34/338 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +  RG +    ++ +LI  +  +D           +  N    N+ ++  L+ 
Sbjct: 531 AFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLH 590

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+L     + + +        +I  T ++   +++   E+  VL + M  K +  
Sbjct: 591 GFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRP 650

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++    K  N+  AL  ++EM+  G   N+  YT  +   C+   +  A  L 
Sbjct: 651 DNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLC 710

Query: 187 QEMENAGLKPYDETFN----------------------------------LLIEGCAKAK 212
           +EM  +   P   TFN                                   LI+G  K  
Sbjct: 711 KEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVG 770

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           +I+E++    +       P C +++ +I  LC+ G+  +A  +    L KG  P+ + Y+
Sbjct: 771 QIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYN 830

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            LI      GE  + L +Y +M  K + P    + +L 
Sbjct: 831 ILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALF 868



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 2/276 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E A+ V   +   G  L LISF  +++   K   ++    +++ M E    P+    
Sbjct: 597 RLTE-AYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFH 655

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I+   K G +   ++  D +      P  +  T+L+  + +   +    +L K ML 
Sbjct: 656 TCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLA 715

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
            + + ++  ++  +       NLE+A  +Y  ML+ GF AN     T I  +C+ G+I+E
Sbjct: 716 SHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQE 774

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+      G  P   +++ +I    K   I E++    +M+ + + P   A+N +IR
Sbjct: 775 AIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIR 834

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
                G + +  G+    + KG  PN  T+  L  G
Sbjct: 835 WCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 172/403 (42%), Gaps = 38/403 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A ++ R +   GF  + + + +LIH   KS R      ++  M+E    P+  T   
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LCK G  +      + +    C P V+  T++I  + +  R+     ++K M+   
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE--- 180
              D++ Y  ++    K+  L+ A  + +E+ K   S N  +Y++ +   C+ G +E   
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 181 ---------------------------------EANCLMQEMENAGLKPYDETFNLLIEG 207
                                            EA  + Q M + G KP   T+N+LI G
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 208 CAKAK--RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
             +++  R+E + +    +     LP    +  +   LC+ G   +A  ML  A  +G++
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + + Y+ L  G   +G++   + L+ EM  +  +P   AY  +I+ L +  KLE+A K+
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKF 670

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           F  M      P V  Y +LV      GN  +A H  E M++ G
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG 713



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 176/359 (49%), Gaps = 7/359 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLISALCKGGQLQTYVDM 80
            L +F  L+  + K+  ++  + ++  M+      P+ A    ++  L K  +++   ++
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV 247

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
             ++      P  I   ++I  + +    +E + +L  ML K  +   + Y ++V +  K
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              LE A  ++  M   GF  NS +YT+ I  + + G+++EA  L  EM  AG +P   T
Sbjct: 308 AGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVIT 367

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
             ++I+G  K+   E++    E+MM     P+   +  +I+ L + G    A  ++   +
Sbjct: 368 HTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G  P+ +TY  L+ G+ K G + E  +L  E++  S SP L  Y+SL++ LC  G +E
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE 487

Query: 321 EA-DKYFKIMK--SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP-STSY 375
           +  D  F+  K  + +L PG+     +VG+  + G   +A  + + MVSEG KP +T+Y
Sbjct: 488 KTLDDLFEQSKAAAETLDPGL-CCSIIVGL-CKTGRLDEACRIFQRMVSEGCKPDATTY 544



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 160/365 (43%), Gaps = 37/365 (10%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           EQ GF   + ++N L++++         + I++ ML+    PN  +   LI +  +  + 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              V   + +  KRC P                                   D   + ++
Sbjct: 171 DDAVTCFEIMKRKRCKP-----------------------------------DLHTFLIL 195

Query: 135 VYAKVKMRNLESALVVYEEMLKRGF-SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           V    K    E A  V+ EM+  GF   +  ++T  +    +  +++EA  +  +ME  G
Sbjct: 196 VDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG 255

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    +N +I+G AKA   +E+L   + M+++  +P+   +  ++  LC+ G  ++A 
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAE 315

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +  +    GF PN + Y+ LI G+AK G ++E   L+ EM      P +  +T +I  L
Sbjct: 316 ELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGL 375

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP-S 372
           C+ G  E+A K F+ M      P V  Y +++    + G  A A  + + M++ G  P S
Sbjct: 376 CKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDS 435

Query: 373 TSYLC 377
            +Y+C
Sbjct: 436 VTYIC 440



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 174/409 (42%), Gaps = 38/409 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   +E+ GF    I++NT+I  + K+       ++  +ML     P E T   L++
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LCK G L+   ++   +      P  ++ TSLI    +  R++E   L   M+      
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRP 363

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I +++++    K  N E A   +EEM++ G   N   YTT I    + G++  A  +M
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G  P   T+  L++G  K  R++E+    +++      P+   ++ ++  LC+ 
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDG 483

Query: 247 GNAKQA-----------------------------NGMLTLA-------LDKGFSPNEIT 270
           G+ ++                               G L  A       + +G  P+  T
Sbjct: 484 GSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT 543

Query: 271 YSHLIGGY--AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           Y+ LI G   ++E  ++    L +++E     P    YT L   LC+ G+++ A K  + 
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE 603

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
             S      V  Y +L      +G   +A+ L +EMV +G  P  +  C
Sbjct: 604 ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYC 652



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 169/376 (44%), Gaps = 8/376 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A      + + G   +++++ T+I  ++K  R    +RI + M+ +  +P+  T   
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G+L     +LD +     SP + + +SL+  +     +E+   L     +  
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEK--TLDDLFEQSK 498

Query: 124 MIHDTIAYSL---IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY--GK 178
              +T+   L   I+    K   L+ A  +++ M+  G   ++  Y   I   C     +
Sbjct: 499 AAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENR 558

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +E A  L+ ++E  G  P   T+  L  G  K   ++ ++   E+  SR       A+  
Sbjct: 559 VERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +   LC  G   +A  +    + +G +P+   Y  +I G  K  ++++  K + EM  K 
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS-LVPGVDIYESLVGIHLEKGNKAKA 357
             PT+  YT+L+ +LC  G ++EA   F+ M +   LV  V IY++L+    +      A
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAA 738

Query: 358 LHLCEEMVSEGLKPST 373
           L L E+M+S G  P+ 
Sbjct: 739 LKLFEDMISRGNVPTA 754



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 3/304 (0%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ--EERIEEGMVLLKRML 120
           ++I  LCK G+L     +  R+  + C P       LI  + +  E R+E    LL  + 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +   + D + Y+ +     K+  ++ A+ + EE   RG++A+   YT      C  G+++
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L QEM   G  P    +  +I G  K K++E++  + ++M+ +   P+ + +  ++
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 241 RRLCECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           + LC  GN  +A       L +G    + + Y  LI G+ K  ++   LKL+ +M  +  
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            PT     SL   L + GK E+A +  + M +    P    + +++    +     K L 
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLK 810

Query: 360 LCEE 363
           L +E
Sbjct: 811 LVQE 814



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 8/200 (4%)

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E AG +    T+N L+      K   +  +  E+M+   + P+  +FN +IR       A
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE-MEYKSISPTLPAYTS 308
             A     +   K   P+  T+  L+    K G  ++  ++++E M    + P    +T+
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           ++ +L +  +++EA + F  M+     P    Y +++    + G+  +AL + + M+++ 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 369 LKPS-------TSYLCSAST 381
             P+        + LC A T
Sbjct: 291 CVPTEVTYGILVNSLCKAGT 310


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 164/358 (45%), Gaps = 45/358 (12%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-----YPNEATIRTLISALCKGGQLQT 76
           S+ S NTL++   ++ R DLV      M +N R      PN  T   LI ALCK   +++
Sbjct: 164 SVRSLNTLLNAFVQNKRYDLV----HAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVES 219

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            V +LD                                    M    MI + + Y+ I+ 
Sbjct: 220 AVKVLD-----------------------------------EMPAMGMIPNVVTYTTILG 244

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                 ++ +A  V+ E+  RG+  ++  YT  +  YCE G++ +A  LM +M   G++P
Sbjct: 245 GYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEP 304

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
            + T+ +++E   K K+  E+ +  + M+ R+ +PS +   ++I  LCE G  ++A  + 
Sbjct: 305 NEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELW 364

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L K   P+    S LI    KEG++ E  KL+ E E  +I P+L  Y +LI+ +C+ 
Sbjct: 365 KRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAI-PSLLTYNTLIAGMCEK 423

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           G+L EA K +  M      P    Y  L+    + GN  + + + EEM+     P+ S
Sbjct: 424 GELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKS 481



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 1/250 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  RG+     ++  L++   +  R     ++   M EN   PNE T   ++ A CK  +
Sbjct: 262 LFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKK 321

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                ++LD +  ++  P   +   +I  + +  +IEE   L KRML+KN + D    S 
Sbjct: 322 AGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMST 381

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   K   +  A  ++ E  +RG   +   Y T I   CE G++ EA  L  +M   G
Sbjct: 382 LIHWLCKEGKVWEARKLFGE-FERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKG 440

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            KP   T+N+LI+G +K    +E +   E+M+  + +P+ S +  +I  LC+ G   + +
Sbjct: 441 YKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVD 500

Query: 254 GMLTLALDKG 263
            ++++A+  G
Sbjct: 501 KVVSMAMASG 510



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/258 (20%), Positives = 115/258 (44%), Gaps = 1/258 (0%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           + N  H+   Y  I++   + R      ++  ++ K        ++   I  Y   GK +
Sbjct: 88  QPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPD 147

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEM 239
            A      +++  ++    + N L+    + KR +   +  +   S+  +LP+    N +
Sbjct: 148 FALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNIL 207

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I+ LC+  + + A  +L      G  PN +TY+ ++GGY+  G++    K++ E+  +  
Sbjct: 208 IKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGW 267

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    YT L++  C+ G+L +A K    M  + + P    Y  +V  + ++    +A +
Sbjct: 268 LPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARN 327

Query: 360 LCEEMVSEGLKPSTSYLC 377
           L ++M+     PS++  C
Sbjct: 328 LLDDMLERQYVPSSALCC 345



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/303 (19%), Positives = 124/303 (40%), Gaps = 20/303 (6%)

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           D  D I  K     V     L+L  + + +I+ G  +   ++R   +     ++L  + +
Sbjct: 96  DTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTFIR 155

Query: 139 VKMRNLESALVVYEEMLKRGFSAN---SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           ++  N++ ++     +L   F  N     V+  F     +YG +                
Sbjct: 156 IQDFNVQRSVRSLNTLLN-AFVQNKRYDLVHAMFKNCRSKYGVL---------------- 198

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T N+LI+   K   +E ++   ++M +  ++P+   +  ++      G+   AN +
Sbjct: 199 PNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKV 258

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                D+G+ P+  TY+ L+ GY ++G + + +KL  +M    + P    Y  ++ + C+
Sbjct: 259 FGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCK 318

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
             K  EA      M     VP   +   ++ +  E G   +A  L + M+ +   P  + 
Sbjct: 319 EKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAI 378

Query: 376 LCS 378
           + +
Sbjct: 379 MST 381


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 171/369 (46%), Gaps = 1/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +   F +   ++  G    + + N LI+     +R    + +   +L+    P+ AT  T
Sbjct: 85  YPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTT 144

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G++   + + D++ G+   P V+   +LI  + +       + LL+ M + N
Sbjct: 145 LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 204

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y+ I+ +  K R +  A  ++ +M+ +G S + F YT+ I + C   + +   
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 264

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ +M N+ + P    F+ +++   K  +I E+    + M+ R + P+   +N ++   
Sbjct: 265 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 324

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  +    +  G++PN I+Y+ LI GY K   + +   L+ EM  K + P  
Sbjct: 325 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +L+   C  G+L++A   F  M +H  +P +  Y  L+    +K +  +A+ L + 
Sbjct: 385 VTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443

Query: 364 MVSEGLKPS 372
           +    + P 
Sbjct: 444 IEGSNMDPD 452



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/392 (22%), Positives = 177/392 (45%), Gaps = 36/392 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +++++ TLI+ + K    +   R+ + M +    P+     ++I +LCK  Q+   
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 228

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++  ++ G+  SP +   TSLI  +      +    LL +M+   ++ D + +S +V A
Sbjct: 229 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288

Query: 138 KVK---------------MRNLESALV--------------------VYEEMLKRGFSAN 162
             K               +R +E  +V                    V++ M+  G++ N
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y T I  YC+  ++++A  L +EM    L P   T+N L+  C    R++++++   
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFH 407

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M++   +P  + +  ++  LC+  +  +A  +L         P+   Y+ +I G  + G
Sbjct: 408 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 467

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           E++    ++  +  K + P +  YT +I+ LC+ G L+EA+K F  M  +   P    Y 
Sbjct: 468 ELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYN 527

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           ++    L+     +A+ L +EM++ G     S
Sbjct: 528 TITQGLLQNKEALRAIQLLQEMLARGFSADVS 559



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 170/366 (46%), Gaps = 8/366 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S + FN L+  + K+ +   V+ +   M      P+  T+  LI++ C   +L     +L
Sbjct: 68  STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVL 127

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P     T+LI  +  E +I + + L  +M+ +    + + Y  ++    K+
Sbjct: 128 AKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 187

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N  +A+ +   M +     +  VYT+ I + C+  ++ EA  L  +M   G+ P   T+
Sbjct: 188 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTY 247

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI         +   +   QM++ K++P    F+ ++  LC+ G   +A+ ++ + + 
Sbjct: 248 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMII 307

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  PN +TY+ L+ G+  + E+ E +K++  M +   +P + +Y +LI+  C+  ++++
Sbjct: 308 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 367

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS------- 374
           A   F+ M    L+P    Y +L+      G    A+ L  EMV+ G  P  +       
Sbjct: 368 ATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 426

Query: 375 YLCSAS 380
           YLC  S
Sbjct: 427 YLCKKS 432



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 152/360 (42%), Gaps = 10/360 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L    F    ++FNTL   ++  +R          ML     P+      L++++ K  Q
Sbjct: 35  LSHNRFHSKSLNFNTLDDALSSFNR----------MLHMHPPPSTVDFNRLLTSIAKTKQ 84

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
             T   + +++      P V     LI       R+     +L ++L+     DT  ++ 
Sbjct: 85  YPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTT 144

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        +  AL ++++M+  GF  N   Y T I   C+ G    A  L++ ME   
Sbjct: 145 LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 204

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P    +  +I+   K +++ E+ +   +M+ + + P    +  +I  LC     K   
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 264

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   ++    P+ + +S ++    KEG+I E   +   M  + + P +  Y +L+   
Sbjct: 265 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 324

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C   +++EA K F  M  +   P V  Y +L+  + +     KA +L EEM  + L P+T
Sbjct: 325 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 139/303 (45%), Gaps = 2/303 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++ F+T++  + K  +      +   M+     PN  T   L+   C   ++   V + 
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +     +P VI   +LI    + +R+++   L + M +K +I +T+ Y+ +++    +
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHV 396

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L+ A+ ++ EM+  G   +   Y   +   C+   ++EA  L++ +E + + P  + +
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++I+G  +A  +E +      + S+ L P+   +  MI  LC  G   +AN +      
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SP+  TY+ +  G  +  E    ++L  EM  +  S  +   T L+  LC   KL++
Sbjct: 517 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD-DKLDQ 575

Query: 322 ADK 324
           + K
Sbjct: 576 SVK 578



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 1/239 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +   G++ ++IS+NTLI+   K  R D    +++ M +    PN  T  TL+ 
Sbjct: 333 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 392

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+LQ  + +   +      P +     L+  + ++  ++E M LLK +   NM  
Sbjct: 393 X-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 451

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    +   LE+A  ++  +  +G   N   YT  I   C  G ++EAN L 
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 511

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM+  G  P   T+N + +G  + K    ++   ++M++R      S    ++  LC+
Sbjct: 512 MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 570



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 90/211 (42%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +S  +  F      +  +++A      M +    P    FN L+   AK K+     S  
Sbjct: 33  SSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 92

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            QM S  + P     N +I   C       A  +L   L  G  P+  T++ LI G   E
Sbjct: 93  NQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVE 152

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G+I + L L+ +M  +   P +  Y +LI+ LC+ G    A +  + M+  +  P V +Y
Sbjct: 153 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 212

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            S++    +     +A +L  +MV +G+ P 
Sbjct: 213 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPD 243


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 167/354 (47%), Gaps = 2/354 (0%)

Query: 13  YLE--QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           YLE    G+  ++ +FN L++ + K  +      I+  + +    P   +  TLI+  CK
Sbjct: 220 YLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCK 279

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G L+    +   +   R  P V   ++LI  + +E ++E+   L K M  + ++ + + 
Sbjct: 280 SGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVT 339

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ ++  + K   ++ AL +Y++M  +G  A+  +Y T I   C+ G   EA   + EM 
Sbjct: 340 FTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMT 399

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             GL P   T+  L++G  K   +E +L   ++M+   +     AF  +I  LC  G   
Sbjct: 400 KRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIV 459

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A   L   L  G  P++ TY+ ++ G+ K+G+++   KL  EM+     P +  Y  L+
Sbjct: 460 DAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLM 519

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           + LC+ G+++ AD     M +  +VP    Y  L+  H + G      ++  EM
Sbjct: 520 NGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM 573



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 117/232 (50%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +KM +   AL  Y E+L  G+  N + +   +   C+ GK+++A  +  E+   GL+P  
Sbjct: 208 IKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTA 267

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN LI G  K+  +EE       M   ++ P    ++ +I  LC+    + AN +   
Sbjct: 268 VSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKE 327

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
             D+G  PN++T++ LI G  K G +   L++Y +M  K +   L  Y +LI  LC+ G 
Sbjct: 328 MCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGY 387

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             EA K+   M    L+P    Y +L+    ++G+   AL + +EMV EG++
Sbjct: 388 FREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQ 439



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 148/297 (49%), Gaps = 3/297 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + +++ LI  + K  + +    +++ M +    PN+ T  TLI+  CK G++   +++ 
Sbjct: 301 DVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIY 360

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  K     +++  +LI  + +     E    +  M ++ +I D   Y+ ++    K 
Sbjct: 361 QQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKE 420

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +LE AL + +EM+K G   ++  +T  I   C  GKI +A   ++EM  AGLKP D T+
Sbjct: 421 GDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTY 480

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++++G  K   ++      ++M S   +P    +N ++  LC+ G  K A+ +L   L+
Sbjct: 481 TMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLN 540

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            G  P++ITY+ L+ G+ K G++ +   +  EM    +     +Y SL+  L +  K
Sbjct: 541 LGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLLHELSKASK 594



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 148/328 (45%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
            Y  +L++   PN  T   L++ LCK G+++    + D I      P  +   +LI    
Sbjct: 219 FYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYC 278

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +   +EEG  L   M    +  D   YS ++    K   LE A  +++EM  RG   N  
Sbjct: 279 KSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDV 338

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            +TT I   C+ G+++ A  + Q+M   GLK     +N LI+G  K     E+  +  +M
Sbjct: 339 TFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEM 398

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
             R L+P    +  ++   C+ G+ + A  M    + +G   + + ++ +I G  ++G+I
Sbjct: 399 TKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKI 458

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +  +   EM    + P    YT ++   C+ G ++   K  K M+S   +PGV  Y  L
Sbjct: 459 VDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVL 518

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +    ++G    A  L   M++ G+ P 
Sbjct: 519 MNGLCKQGQVKNADMLLNAMLNLGVVPD 546



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 9/256 (3%)

Query: 123 NMIHDTIAYSL------IVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCE 175
           +M+H  IA+ +      +++  V  +   SA  V+  +L+ +G  ++SFV+   +  Y E
Sbjct: 115 SMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTE 174

Query: 176 YGKIEEANCLMQEMENAGLK-PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           +G + +A    +  +   LK P++     L+E   K      +L +  +++     P+  
Sbjct: 175 FGYVSDAIQCFRLTKKHNLKIPFNGC-KCLLERMIKMSSPMVALEFYLEILDSGYPPNVY 233

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            FN ++ RLC+ G  K A  +       G  P  ++++ LI GY K G ++E  +L   M
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVM 293

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
           E   + P +  Y++LI  LC+  +LE+A+  FK M    LVP    + +L+    + G  
Sbjct: 294 EEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRV 353

Query: 355 AKALHLCEEMVSEGLK 370
             AL + ++M ++GLK
Sbjct: 354 DLALEIYQQMFTKGLK 369


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 172/376 (45%), Gaps = 9/376 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R + + G   + +++ T++  +  S  +D    ++  ML     P+      L+ 
Sbjct: 165 ALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVH 224

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL---------RIIQEERIEEGMVLLK 117
            LCK G +     +L ++  +   P +      +          R ++  R+ E    L+
Sbjct: 225 VLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLR 284

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           +M+      D + Y+ I+    K   ++ A  V ++ + +GF  + F Y + I  +C+ G
Sbjct: 285 KMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDG 344

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
             + A  + ++    GL+P    +N LI+G ++   I  +L    +M     LP+   +N
Sbjct: 345 DPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYN 404

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I  LC+ G    A+ ++  A+ KG  P+  TY+ LI GY K+ ++    ++   M  +
Sbjct: 405 LVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQ 464

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            ++P +  Y +L++ LC+ GK EE  + FK M+     P +  Y  +V    +     +A
Sbjct: 465 GMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEA 524

Query: 358 LHLCEEMVSEGLKPST 373
           + L  EM S+GLKP  
Sbjct: 525 VDLLGEMKSKGLKPDV 540



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 161/372 (43%), Gaps = 1/372 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +   GF    +++N++I    K        R+ +  +     P+E T  +LI+  CK 
Sbjct: 284 RKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKD 343

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G     + +     GK   P +++  +LI  + Q+  I   + L+  M     + +   Y
Sbjct: 344 GDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTY 403

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           +L++    KM  +  A  + ++ + +G   + F Y T I  YC+  K++ A  ++  M +
Sbjct: 404 NLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWS 463

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+N L+ G  KA + EE +   + M  +   P+   +N ++  LC+     +
Sbjct: 464 QGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNE 523

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK-SISPTLPAYTSLI 310
           A  +L     KG  P+ +++  L  G+ K G+I    +L+  ME +  +  T   Y  ++
Sbjct: 524 AVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIV 583

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S+  +   +  A K F +MK+    P    Y  ++    + GN  +      E + +   
Sbjct: 584 SAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFI 643

Query: 371 PSTSYLCSASTC 382
           PS +       C
Sbjct: 644 PSLTTFGRVLNC 655



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 164/368 (44%), Gaps = 10/368 (2%)

Query: 16  QRGFSLSLISFNTLIH------VVTKSDRNDLVWRIYQHMLENIR---YPNEATIRTLIS 66
           +RG   +L +FN  +        + ++ RN  V    +++ + +     P++ T  ++I 
Sbjct: 244 KRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIID 303

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G +Q    +L     K   P      SLI    ++   +  M + K  L K +  
Sbjct: 304 GYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRP 363

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ ++    +   +  AL +  EM + G   N + Y   I   C+ G + +A+ L+
Sbjct: 364 SIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLV 423

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +    G  P   T+N LI+G  K  +++ +     +M S+ + P    +N ++  LC+ 
Sbjct: 424 DDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKA 483

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G +++   +     +KG +PN ITY+ ++    K  ++ E + L  EM+ K + P + ++
Sbjct: 484 GKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSF 543

Query: 307 TSLISSLCQCGKLEEADKYFKIM-KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
            +L +  C+ G ++ A + F+ M K + +      Y  +V    E+ N   A+ L   M 
Sbjct: 544 GTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMK 603

Query: 366 SEGLKPST 373
           + G  P  
Sbjct: 604 NSGCDPDN 611



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 1/321 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   S++ +NTLI  +++        ++   M EN   PN  T   +I+ LCK G +  
Sbjct: 359 KGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSD 418

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++D    K C P +    +LI    ++ +++    ++ RM  + M  D I Y+ ++ 
Sbjct: 419 ASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLN 478

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K    E  + +++ M ++G + N   Y   + + C+  K+ EA  L+ EM++ GLKP
Sbjct: 479 GLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKP 538

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQANGM 255
              +F  L  G  K   I+ +     +M  +  +  + + +N ++    E  N   A  +
Sbjct: 539 DVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKL 598

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            ++  + G  P+  TY  +I G+ K G I +  K   E   K   P+L  +  +++ LC 
Sbjct: 599 FSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCV 658

Query: 316 CGKLEEADKYFKIMKSHSLVP 336
             K+ EA     +M    +VP
Sbjct: 659 KDKVHEAVGIIHLMLQKGIVP 679



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 142/312 (45%), Gaps = 9/312 (2%)

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           + G++Q  VD  +R+    C P V  + +++  +++     +   +  RM  + +  D  
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y++ + +  K     +AL +   M + G  +N+  Y T +    + G+ + A  L  EM
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG-- 247
               L P    FN L+    K   + ES     +++ R + P+   FN  ++ LC  G  
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 248 -----NAK--QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                N++  +A   L   ++ GF P+++TY+ +I GY K+G +Q+  ++  +  +K   
Sbjct: 268 DRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFK 327

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y SLI+  C+ G  + A   FK      L P + +Y +L+    ++G    AL L
Sbjct: 328 PDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQL 387

Query: 361 CEEMVSEGLKPS 372
             EM   G  P+
Sbjct: 388 MNEMAENGCLPN 399



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 118/255 (46%), Gaps = 1/255 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    + ++NTLI    K  + D    +   M      P+  T  TL++ LCK G+ + 
Sbjct: 429 KGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +++   +  K C+P +I    ++  + + +++ E + LL  M  K +  D +++  +  
Sbjct: 489 VMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFT 548

Query: 137 AKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
              K+ +++ A  ++  M K+      +  Y   + A+ E   +  A  L   M+N+G  
Sbjct: 549 GFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCD 608

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P + T+ ++I+G  K   I +   +  + M ++ +PS + F  ++  LC      +A G+
Sbjct: 609 PDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGI 668

Query: 256 LTLALDKGFSPNEIT 270
           + L L KG  P  + 
Sbjct: 669 IHLMLQKGIVPETVN 683



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 116/274 (42%), Gaps = 26/274 (9%)

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           ++ +++E +   +RM   N      +++ I+   V+      A  VY  M  RG  ++ +
Sbjct: 88  RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            YT  I ++C+  +   A  L++ M   G       +  ++ G   +   + +    ++M
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           ++R L P   AFN+++  LC+ G   ++  +L   L +G  PN  T++  + G  +EG +
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGAL 267

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
              ++                            ++ EA++Y + M +    P    Y S+
Sbjct: 268 DRAVR--------------------------NSRVVEAEEYLRKMVNGGFEPDDLTYNSI 301

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           +  + +KG    A  + ++ V +G KP     CS
Sbjct: 302 IDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCS 335


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 175/375 (46%), Gaps = 6/375 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E+      ++ + TLIH + K  +    + ++  M+     PN  T  +L+ 
Sbjct: 198 AIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVY 257

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC  G+ +    +L+ +   +  P  I  T+++  + +E  + +   ++  M +  +  
Sbjct: 258 ALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEP 317

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++        ++ A+ V++ M+ +G + N F Y T I  YC+  ++++A  L 
Sbjct: 318 DVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLF 377

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    L P   T+N LI G     R++++++   +M++   +P    +  ++  LC+ 
Sbjct: 378 EEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKN 437

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +  +A  +L         P+   Y+ +I G  + GE+++   L+  +  K + P +  Y
Sbjct: 438 CHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTY 497

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +   LC+ G L+EA K F  M  ++       Y ++    L     ++A+ L EEM++
Sbjct: 498 NIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLA 557

Query: 367 EGLKPSTSYLCSAST 381
            G      + C  ST
Sbjct: 558 RG------FSCDVST 566



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 168/372 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ +     + R ++  G   ++ + N LI+     +R +  + +   +L+    P+ A+
Sbjct: 87  VKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTAS 146

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC  GQ+   + + D++  +   P V++  +LI  + +       + LL+ M 
Sbjct: 147 FTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSME 206

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           + N   D + Y  ++++  K R    A  ++ EM+ +G S N     + + A C  G+ +
Sbjct: 207 KGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWK 266

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
             N L+ EM ++ + P   +   +++   K   + ++    + M    + P    +  +I
Sbjct: 267 HVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALI 326

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C      +A  +  + + KG +PN  +Y+ LI GY K   + + + L+ EM  + + 
Sbjct: 327 DGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLI 386

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y +LI  LC  G+L++A   F+ M +   +P +  Y  L+    +  +  KA+ L
Sbjct: 387 PNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMAL 446

Query: 361 CEEMVSEGLKPS 372
            + +    L P 
Sbjct: 447 LKAIEGSNLDPD 458



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 163/366 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G      SF TLI  +    +      ++  M+     P+     TLI+
Sbjct: 128 AFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLIN 187

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G     + +L  +    C P V+V  +LI  + ++ +  +   L   M+ K +  
Sbjct: 188 GLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISP 247

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + +  + +VYA   +   +    +  EM+      N+   TT + A C+ G + +A+ ++
Sbjct: 248 NIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVV 307

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M  +G++P   T+  LI+G      ++E++   + M+ +   P+  ++N +I   C+ 
Sbjct: 308 DMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKI 367

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +      +   PN +TY+ LI G    G +Q+ + L+ EM      P L  Y
Sbjct: 368 ERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTY 427

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+  LC+   L++A    K ++  +L P + IY  ++      G    A  L   + S
Sbjct: 428 RILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSS 487

Query: 367 EGLKPS 372
           +GLKP+
Sbjct: 488 KGLKPN 493



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 163/365 (44%), Gaps = 8/365 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   ++ + TLI+ + K+       R+ + M +    P+     TLI +LCK  Q    
Sbjct: 174 GFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQA 233

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++   +  K  SP ++   SL+  +      +    LL  M+   ++ + I+ + +V A
Sbjct: 234 FNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDA 293

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +  A  V + M + G   +   YT  I  +C   +++EA  +   M + G  P 
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPN 353

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N LI G  K +R+++++   E+M  +KL+P+   +N +I  LC  G  + A  +  
Sbjct: 354 VFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFR 413

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +  G  P+ +TY  L+    K   + + + L   +E  ++ P +  YT +I  +C+ G
Sbjct: 414 EMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAG 473

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           +LE+A   F  + S  L P V  Y  +     ++G   +A  L  EM            C
Sbjct: 474 ELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA--------C 525

Query: 378 SASTC 382
           SA  C
Sbjct: 526 SADGC 530



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 163/358 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G S ++++ N+L++ +        V  +   M+++   PN  ++ T++ 
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G +    D++D +      P V+  T+LI        ++E + +   M+ K    
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAP 352

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +  +Y+ ++    K+  ++ A+ ++EEM ++    N+  Y T I   C  G++++A  L 
Sbjct: 353 NVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALF 412

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G  P   T+ +L++   K   ++++++  + +    L P    +  +I  +C  
Sbjct: 413 REMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRA 472

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A  + +    KG  PN  TY+ +  G  K G + E  KL+ EM+  + S     Y
Sbjct: 473 GELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTY 532

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            ++     +  +   A +  + M +      V     LVG+  + G      H  E+M
Sbjct: 533 NTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 124/266 (46%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           R+     +L ++L+     DT +++ ++        +  AL ++++M+  GF  +  +Y 
Sbjct: 124 RVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYA 183

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           T I   C+ G    A  L++ ME    +P    +  LI    K ++  ++ +   +M+++
Sbjct: 184 TLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITK 243

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            + P+    N ++  LC  G  K  N +L   +D    PN I+ + ++    KEG + + 
Sbjct: 244 GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQA 303

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
             +   M    + P +  YT+LI   C   +++EA K F +M      P V  Y +L+  
Sbjct: 304 HDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLING 363

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
           + +     KA++L EEM  + L P+T
Sbjct: 364 YCKIERMDKAMYLFEEMCRQKLIPNT 389



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 94/210 (44%)

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
           S ++  F   Y  +  +++A      M +    P    F  ++    K KR    LS   
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M S  +  +    N +I   C       A  +L   L  G  P+  +++ LI G   EG
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +I E L L+ +M ++   P +  Y +LI+ LC+ G    A +  + M+  +  P V +Y 
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +L+    +   + +A +L  EM+++G+ P+
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPN 248


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 175/403 (43%), Gaps = 35/403 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E +G   +++++ TL+  + +    + +  +   M E    PN     ++I ALCK   
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRS 379

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR----------KN 123
               + +L ++    C P  I  ++LI  + QE R++E   LL+   R           +
Sbjct: 380 ASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTS 439

Query: 124 MIH-------------------------DTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           +IH                         D + +  +++  V    +  AL+V E+M  R 
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              ++ +Y   I   C+   +  A  L++EM    + P    +  LI+G  + + ++E+ 
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEAR 559

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              E M  + + P    +N MI+  C+ G   +A   ++     G  P+E TY+ LIGGY
Sbjct: 560 KIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGY 619

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           AK+G I   L L  +M  +   P + AY+SLI+  C+ G  + A+  F  M+S  L P V
Sbjct: 620 AKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNV 679

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAST 381
             Y  L+G   +K    +A    E M+     P+   L S  T
Sbjct: 680 ITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVT 722



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 15/372 (4%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L S+ +LIH         +   +   M+E    P+  T   LI  L   GQ+   + + 
Sbjct: 433 NLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVR 492

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +++  ++  P   +   LI  + +++ +     L++ ML +N+  D   Y+ ++   ++ 
Sbjct: 493 EKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRN 552

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L+ A  ++E M ++G   +   Y   I  YC++G + EA   M  M   G  P + T+
Sbjct: 553 ESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTY 612

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI G AK   I  +LS    MM R+  P+  A++ +I   C+ G+   A  +      
Sbjct: 613 TTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMES 672

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  PN ITY+ LIG   K+ ++      +  M     SP      SL++ LC       
Sbjct: 673 QGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASII 732

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA---------------KALHLCEEMVS 366
           +      +  H     +DI+ +LV    +  N A               +AL L  +M +
Sbjct: 733 SSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMAN 792

Query: 367 EGLKPSTSYLCS 378
           +G KP ++   S
Sbjct: 793 KGYKPDSATFLS 804



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 107/231 (46%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E  L + E     G   N+  Y   I  YC  G +     L+ EME  GL P   T+  
Sbjct: 275 VEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGT 334

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L+    +   +E+  S   +M  R+L P+   +N +I  LC+C +A QA  +L      G
Sbjct: 335 LMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG 394

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ IT+S LI G  +EG +QE  +L  E     ++P L +YTSLI   C  G++  A 
Sbjct: 395 CDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVAS 454

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
                M      P V  + +L+   +  G  ++AL + E+M +  L P  +
Sbjct: 455 NLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDAN 505



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 149/332 (44%)

Query: 40  DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           D   ++Y  ML      ++ +   ++  LC  G ++  + +++   G  C P  +    L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           I    +   +  G++LL  M  K ++   + Y  ++    +  +LE    +  EM +R  
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             N  +Y + I A C+     +A  ++++M   G  P   TF+ LI G  +  R++E+  
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
              +    +L P+ S++  +I   C  G    A+ +L   +++G +P+ +T+  LI G  
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
             G++ E L +  +M  + + P    Y  LIS LC+   L  A    + M   ++ P   
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           +Y +L+   +   +  +A  + E M  +G+ P
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/366 (21%), Positives = 135/366 (36%), Gaps = 85/366 (23%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA ++   + +RG +  +++F  LIH +  + +      + + M      P+      LI
Sbjct: 452 VASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLI 511

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM- 124
           S LCK   L    ++++ +  +   P   V T+LI   I+ E ++E   + + M +K + 
Sbjct: 512 SGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIH 571

Query: 125 ----------------------------------IHDTIAYSLIVYAKVKMRNLESALVV 150
                                             I D   Y+ ++    K  N+  AL +
Sbjct: 572 PDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSL 631

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             +M+KR    N   Y++ I  YC+ G  + A CL   ME+ GL P   T+ +LI    K
Sbjct: 632 LCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFK 691

Query: 211 AKRIEESLSY-----------------------CEQMMS--------------------- 226
             ++  +  Y                       C  M S                     
Sbjct: 692 KDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDI 751

Query: 227 -RKLL-----PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            R L+     P  SA+N +I  LC      +A  +     +KG+ P+  T+  L+ G+  
Sbjct: 752 FRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCS 811

Query: 281 EGEIQE 286
            G+ +E
Sbjct: 812 VGKSRE 817


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 36/372 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D  R + +RGF + ++S N ++  ++  D+ ++  R+   +L+    PN  T  TLI+
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLIN 294

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G++    D+   +  +   P +I  ++LI    +   +  G  L  + L K +  
Sbjct: 295 GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + +S  +   VK  +L +A VVY+ ML +G S N   YT  I   C+ G+I EA  + 
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            ++   G++P   T++ LI+G                                    C+C
Sbjct: 415 GQILKRGMEPSIVTYSSLIDG-----------------------------------FCKC 439

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN +    +    +  G+ P+ + Y  L+ G +K+G +   ++   +M  +SI   +  +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI   C+  + +EA K F++M  + + P V  + +++ + + +G   +AL L   M  
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559

Query: 367 EGLKPSTSYLCS 378
            GL+P     C+
Sbjct: 560 MGLEPDALAYCT 571



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 151/339 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+ + +EQRG    LI+++TLI    K+    +  +++   L      +     + I 
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G L T   +  R+  +  SP V+  T LI  + Q+ RI E   +  ++L++ M  
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + YS ++    K  NL S   +YE+M+K G+  +  +Y   +    + G +  A    
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M    ++     FN LI+G  +  R +E+L     M    + P  + F  ++R     
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +       G  P+ + Y  LI  + K  +    L+L+  M+   IS  +   
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +I  L +C ++E+A K+F  +    + P +  Y +++
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 8/176 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRND----LVWRIYQHMLENIRYPNEA 59
           F+ A  V R +   G    + +F T++ V     R +    L +R+++  LE    P+  
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE----PDAL 567

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
              TLI A CK  +    + + D +   + S  + V   +I  + +  RIE+       +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +   M  D + Y+ ++     +R L+ A  ++E +    F  N+   T  I   C+
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 170/360 (47%), Gaps = 8/360 (2%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF ++ +S+ TL++ + K        ++ + + +    P+     T+I  LCK   +  
Sbjct: 231 QGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNE 290

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D    ++ +   P VI  ++LI       ++     LL  M  KN+  D   Y++++ 
Sbjct: 291 AYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILID 350

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   L+ A  +   M K G   N   Y+T +  YC  G++  A  +   M    + P
Sbjct: 351 ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N++I G  K K ++E+++   +M+ + ++P+   +N +I  LC+ G    A  ++
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                +G   + ITY+ L+ G  K   + + + L+ +M+ + I P    YT+LI  LC+ 
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 530

Query: 317 GKLEEADKYFKIMKSHSLVPG--VDI--YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +L+ A K F+    H LV G  +D+  Y  ++G   ++G   +AL +  +M   G  P 
Sbjct: 531 ARLKNAQKLFQ----HILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPD 586



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 167/363 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E R     ++ +NT+I  + K    +  +  Y  M     +P+  T  TLI 
Sbjct: 256 AIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLIC 315

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  GQL     +L+ +  K  +P V   T LI  + +E +++E   LL  M ++ +  
Sbjct: 316 GFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKP 375

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + YS ++     +  + +A  ++  M++   + +   Y   I   C+   ++EA  L+
Sbjct: 376 NVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLL 435

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM +  + P   T+N LI+G  K+ RI  +L   +++  R        +  ++  LC+ 
Sbjct: 436 REMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKN 495

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            N  +A  +     ++G  PN+ TY+ LI G  K   ++   KL+  +  K     +  Y
Sbjct: 496 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTY 555

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I  LC+ G L+EA      M+ +  +P    +E ++    EK    KA  L  EM++
Sbjct: 556 NVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIA 615

Query: 367 EGL 369
           +GL
Sbjct: 616 KGL 618



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 163/372 (43%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ F  A  + + +E +G    L++ + LI+      +    + +   +L+    PN   
Sbjct: 145 MKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTII 204

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + TL+  LC  G+++  +   D++  +      +   +L+  + +       + LL+ + 
Sbjct: 205 LTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIE 264

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            ++   D + Y+ I+    K + +  A   Y EM  RG   +   Y+T I  +C  G++ 
Sbjct: 265 DRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLM 324

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+ EM    + P   T+ +LI+   K  +++E+ +    M    + P+   ++ ++
Sbjct: 325 GAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLM 384

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C  G    A  +    +    +P+  +Y+ +I G  K   + E + L  EM +K++ 
Sbjct: 385 DGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVV 444

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y SLI  LC+ G++  A    K +        V  Y SL+    +  N  KA+ L
Sbjct: 445 PNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIAL 504

Query: 361 CEEMVSEGLKPS 372
             +M   G++P+
Sbjct: 505 FMKMKERGIQPN 516



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 162/336 (48%), Gaps = 4/336 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEAT 60
           +L   A+D    +  RG    +I+++TLI     + +    + +   M L+NI  P+  T
Sbjct: 286 KLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN-PDVYT 344

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI ALCK G+L+   ++L  +  +   P V+  ++L+        +     +   M+
Sbjct: 345 YTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV 404

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +  +     +Y++++    K ++++ A+ +  EML +    N+  Y + I   C+ G+I 
Sbjct: 405 QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRIT 464

Query: 181 EANCLMQEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            A  LM+E+ + G +P D  T+  L++G  K + ++++++   +M  R + P+   +  +
Sbjct: 465 SALDLMKELHHRG-QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTAL 523

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+    K A  +    L KG   +  TY+ +IGG  KEG + E L +  +ME    
Sbjct: 524 IDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGC 583

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            P    +  +I SL +  + ++A+K    M +  L+
Sbjct: 584 IPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 128/285 (44%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R +P +I    ++  +++ +     + L K+M  K +  D +  S+++     +  +  +
Sbjct: 127 RNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS 186

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             V  ++LK G+  N+ + TT +   C  G+++++     ++   G +    ++  L+ G
Sbjct: 187 FSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNG 246

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K      ++     +  R   P    +N +I  LC+     +A    T    +G  P+
Sbjct: 247 LCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPD 306

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            ITYS LI G+   G++     L  EM  K+I+P +  YT LI +LC+ GKL+EA     
Sbjct: 307 VITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLG 366

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +M    + P V  Y +L+  +   G    A  +   MV   + PS
Sbjct: 367 VMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/328 (21%), Positives = 148/328 (45%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           +  ML     P+      ++ +L K     T + +  ++  K   P ++  + LI     
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
             ++     +L ++L+     +TI  + ++        ++ +L  +++++ +GF  N   
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y T +   C+ G+   A  L++ +E+   +P    +N +I+G  K K + E+  +  +M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           SR + P    ++ +I   C  G    A  +L     K  +P+  TY+ LI    KEG+++
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E   L   M  + + P +  Y++L+   C  G++  A + F  M    + P V  Y  ++
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMI 419

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
               +  +  +A++L  EM+ + + P+T
Sbjct: 420 NGLCKGKSVDEAMNLLREMLHKNVVPNT 447



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/113 (22%), Positives = 52/113 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG   +  ++  LI  + K  R     +++QH+L      +  T   +I  LCK G 
Sbjct: 508 MKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGM 567

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           L   + M  ++    C P  +    +I  + +++  ++   LL  M+ K ++H
Sbjct: 568 LDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLH 620


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 172/402 (42%), Gaps = 35/402 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V R +   G   SL +F+ L+    K      V  + + M      PN  T    I 
Sbjct: 213 ALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIR 272

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L + G++     ++ R+    C P V+  T LI  +    ++++ M L  +M   +   
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y  ++       +L+    ++ EM   G++ +   +T  + A C+ G+I EA  L+
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY-------------------------- 220
             M   G+ P   T+N LI G  +A R++++L                            
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKS 452

Query: 221 ---------CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                     E+M +R + P+  A N  +  L E G   +A  M       G +P+ +TY
Sbjct: 453 GHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTY 512

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + ++  Y+K G++ E +KL  EM      P +    SLI +L + G++EEA + F  M+ 
Sbjct: 513 NMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +L P V  Y  L+    ++G   KA+ L E M   G  P+T
Sbjct: 573 MNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNT 614



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 172/355 (48%), Gaps = 1/355 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ TL+   +     D V +I+  M  +   P+  T   L++ALCK G++    D+LD 
Sbjct: 335 VTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDT 394

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +   P +    +LI  +++  R+++ + L   M    +      Y L++    K  +
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGH 454

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              AL  +E+M  RG + N       + +  E G++ EA  +  E++++GL P   T+N+
Sbjct: 455 PGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNM 514

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +++  +K  +++E++    +M   +  P     N +I  L + G  ++A  M     +  
Sbjct: 515 MMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMN 574

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +P  +TY+ L+ G  KEG+IQ+ ++L+  M     SP    + +L+  LC+  +++ A 
Sbjct: 575 LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLAL 634

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           K F  M + +  P V  + +++   +++     A+ L  +M  + L+P    LC+
Sbjct: 635 KMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCT 688



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 141/284 (49%), Gaps = 1/284 (0%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             LI  ++Q    +E + + +RM+ + +      +S ++ A  K RN+++ + + EEM  
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMES 257

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G   N + YT  I      GKI+EA  +M+ M++ G  P   T+ +LI+    A+++++
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           ++    +M S    P    +  ++ +  +CG+  +   + T     G++P+ +T++ L+ 
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K G I E   L   M  + + P L  Y +LIS L +  +L++A   F  M+S  + P
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAS 380
               Y  L+  H + G+  KAL   E+M + G+ P+    C+AS
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNI-VACNAS 480



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 157/363 (43%), Gaps = 35/363 (9%)

Query: 12   RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
            ++ ++ G   +L  +N LI    +    ++ W +++ M      P+  T  +LI A  K 
Sbjct: 779  KFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKS 838

Query: 72   GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            G++    D+ D +  + C P                                   +TI Y
Sbjct: 839  GKINELFDLYDEMLTRGCKP-----------------------------------NTITY 863

Query: 132  SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
            ++++   VK   L+ A+ +Y  ++   FS     +   I    + G++++A+ +   M +
Sbjct: 864  NMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVH 923

Query: 192  AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             G +P    +N+L+ G  K   ++ +  + ++M+   + P   ++  ++  LC  G    
Sbjct: 924  YGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDD 983

Query: 252  ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            A          G  P+ + Y+ +I G  +    +E L L++EM+ + I P L  Y SLI 
Sbjct: 984  ALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLIL 1043

Query: 312  SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            +L   G +EEA K ++ ++   L P V  Y +L+  +   GN   A  + ++M+  G  P
Sbjct: 1044 NLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDP 1103

Query: 372  STS 374
            +T 
Sbjct: 1104 NTG 1106



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 144/305 (47%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            EVA+++   ++  G +    ++N+LI    KS + + ++ +Y  ML     PN  T   +
Sbjct: 807  EVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMV 866

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            IS L K  +L   +D+   +     SP       LI  +++  R+++   +   M+    
Sbjct: 867  ISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGC 926

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              ++  Y+++V    K+ ++++A   ++ M+K G   +   YT  +   C  G++++A  
Sbjct: 927  RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALH 986

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
              ++++ AGL P    +NL+I G  +++R EE+LS   +M +R ++P    +N +I  L 
Sbjct: 987  YFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLG 1046

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              G  ++A  +       G  PN  TY+ LI GY   G  +    +Y +M      P   
Sbjct: 1047 IVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTG 1106

Query: 305  AYTSL 309
             +  L
Sbjct: 1107 TFAQL 1111



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/374 (21%), Positives = 172/374 (45%), Gaps = 8/374 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+   + ++G   +L ++NTLI  + +++R D    ++ +M      P   T   LI 
Sbjct: 388 AFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLID 447

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G     ++  +++  +  +P ++   + +  + +  R+ E   +   +    +  
Sbjct: 448 YHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAP 507

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D++ Y++++    K+  ++ A+ +  EM K     +  V  + I    + G++EEA  + 
Sbjct: 508 DSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMF 567

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             ME   L P   T+N+L+ G  K  +I++++   E M      P+   FN ++  LC+ 
Sbjct: 568 CRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKN 627

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                A  M          P+ +T++ +I G+ K+ +I+  + L+++M+ K + P     
Sbjct: 628 DEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTL 686

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI----YESLVGIHLEKGNKAKALHLCE 362
            +L+  + + G++E+A   F+I +      G +I    +E ++G  L +    KA+   E
Sbjct: 687 CTLLPGVIKSGQIEDA---FRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGE 743

Query: 363 EMVSEGLKPSTSYL 376
            +V   +    S L
Sbjct: 744 RLVCRAICKDDSVL 757



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/391 (20%), Positives = 170/391 (43%), Gaps = 40/391 (10%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I  N+LI  + K+ R +  W+++  M E    P   T   L++ L K GQ+Q  V + 
Sbjct: 543 DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + ++G  CSP  I   +L+  + + + ++  + +  +M   N   D + ++ I++  +K 
Sbjct: 603 ESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQ 662

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +++A+ ++ +M K+    +     T +    + G+IE+A  + ++         D +F
Sbjct: 663 NQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF 721

Query: 202 -NLLIEGCAKAKRIEESLSYCEQMMSRKLL------------------------------ 230
              ++ G       E+++ + E+++ R +                               
Sbjct: 722 WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFT 781

Query: 231 ------PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                 P+   +N +I    E  N + A  +       G +P+  TY+ LI  + K G+I
Sbjct: 782 KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYES 343
            E+  LY EM  +   P    Y  +IS+L +  +L++A D Y+ ++ S    P    +  
Sbjct: 842 NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLV-SGDFSPTPCTFGP 900

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           L+   L+ G    A  + + MV  G +P+++
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSA 931



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 1/274 (0%)

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN-LESALVVYEEMLKRG 158
           +L I++  R  E M  +  ++++ +I   +   LI++  + +R  L  A    E+M + G
Sbjct: 130 MLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAG 189

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           F  N++ Y   I    + G  +EA  + + M + GLKP  +TF+ L+    K + I+  +
Sbjct: 190 FVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVM 249

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              E+M S  L P+   +   IR L   G   +A  ++    D G  P+ +TY+ LI   
Sbjct: 250 GLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDAL 309

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
               ++ + + L+ +M+  S  P    Y +L+     CG L++ +K +  M++    P V
Sbjct: 310 CTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDV 369

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +  LV    + G   +A  L + M  +G+ P+
Sbjct: 370 VTFTILVNALCKAGRINEAFDLLDTMRKQGVLPN 403



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 147/360 (40%), Gaps = 35/360 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + GF L+  S+N LIH + +S        +Y+ M+     P+  T   L+ A  K   
Sbjct: 185 MREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRN 244

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++T + +L+ +      P +   T  I  + ++ +I+E   ++KRM              
Sbjct: 245 IKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDD----------- 293

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
                                   G   +   YT  I A C   K+++A CL  +M+++ 
Sbjct: 294 ------------------------GCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            KP   T+  L++  +    +++      +M +    P    F  ++  LC+ G   +A 
Sbjct: 330 HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAF 389

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L     +G  PN  TY+ LI G  +   + + L L+  ME   + PT   Y  LI   
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH 449

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + G   +A + F+ MK+  + P +    + +    E G   +A  +  E+ S GL P +
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 121/258 (46%)

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L++M     + +  +Y+ +++  ++    + AL VY  M+  G   +   ++  + A  +
Sbjct: 182 LEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGK 241

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              I+    L++EME+ GL+P   T+ + I    +  +I+E+    ++M      P    
Sbjct: 242 RRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVT 301

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I  LC       A  + T        P+++TY  L+  ++  G + +V K++ EME
Sbjct: 302 YTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME 361

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
               +P +  +T L+++LC+ G++ EA      M+   ++P +  Y +L+   L      
Sbjct: 362 ADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLD 421

Query: 356 KALHLCEEMVSEGLKPST 373
            AL L   M S G++P+ 
Sbjct: 422 DALDLFSNMESLGVEPTA 439



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 81/176 (46%), Gaps = 2/176 (1%)

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-SCSAFNEMIRRLCECGNAKQANGMLT 257
           ET N ++E     +R+E+ +++   +M R+++  +   +  + + L   G  +QA   L 
Sbjct: 125 ETCNHMLEILRVHRRVED-MAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALE 183

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + GF  N  +Y+ LI    + G  +E L++Y  M  + + P+L  +++L+ +  +  
Sbjct: 184 KMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRR 243

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++      + M+S  L P +  Y   + +    G   +A  + + M  +G  P  
Sbjct: 244 NIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDV 299


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 169/374 (45%), Gaps = 2/374 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE--NIRYPNEAT 60
             E A +V   L++ G  +S+++ N+++    K+ + +L++  YQ M++       N  T
Sbjct: 171 FIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTET 230

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +  LI A C  GQ+    ++L++       P       LI    Q +       +L  M+
Sbjct: 231 VGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMI 290

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +N +     Y  I+    K      A  V+ ++  RG++ +  +YTT I   CE G   
Sbjct: 291 ARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFG 350

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L  EM + G++P   T+N ++ G  K+   E +     +M ++    +    N++I
Sbjct: 351 EARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKII 410

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G + +A  +     + G   + ITY+ LI G+ KEG++ E + L  E+  +   
Sbjct: 411 SELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQ 470

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P++  Y  LI   C+ G  E A +    M S  L P    Y++++   L+ G+      L
Sbjct: 471 PSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVREL 530

Query: 361 CEEMVSEGLKPSTS 374
             E  ++G   +T+
Sbjct: 531 YNETCNKGYGTTTA 544



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 166/354 (46%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N LI    ++     +  +   M+     P   T + +I+ LCK  +      + + +
Sbjct: 265 TYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDL 324

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +  +P  ++ T++I  + +     E   L   M+ K M  +   Y+ +++  +K  + 
Sbjct: 325 KDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDF 384

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  +Y EM  +G+   +      I   C  GK +EA  + ++M   G++    T+N L
Sbjct: 385 ERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSL 444

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  K  +++E ++   +++++   PS S +  +I + C+ G+ + A  +L     KG 
Sbjct: 445 IRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGL 504

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  TY  ++ G  K G+ + V +LY E   K    T      +IS LC  GK +EA +
Sbjct: 505 HPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASE 564

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            FK M    +      Y SL+    ++G   K+++L  E+V++GL+PS S   S
Sbjct: 565 MFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYAS 618



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/376 (21%), Positives = 167/376 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ V   L+ RG++   + + T+IH + +        +++  M++    PN  T  T++ 
Sbjct: 317 AYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLH 376

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G  +   ++ + +  K      +    +I  +    + +E   + K+M    +  
Sbjct: 377 GSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQA 436

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I Y+ ++    K   ++  + +  E++ +    +  +Y   I   C+ G  E A  L+
Sbjct: 437 DAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLL 496

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M + GL P   T++ ++ G  K+   E       +  ++    + +  N++I  LC  
Sbjct: 497 GDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSR 556

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G + +A+ M     + G   + ITY+ LI G+ KEG++ + + L  E+  + + P+  +Y
Sbjct: 557 GKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSY 616

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  LCQ G  E A + +  M S  + P  ++ E L+    ++G   + +     M+ 
Sbjct: 617 ASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLE 676

Query: 367 EGLKPSTSYLCSASTC 382
             +KP  +     + C
Sbjct: 677 NKIKPKKAAFEDLAEC 692



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 146/312 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A ++   +  +G+  + ++ N +I  +    ++D  + +++ M E     +  T  +
Sbjct: 384 FERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNS 443

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK G++   +++L+ +  +   P V +   LI++  ++   E    LL  M  K 
Sbjct: 444 LIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKG 503

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +   Y  +++  +K  + E    +Y E   +G+   +      I   C  GK +EA+
Sbjct: 504 LHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEAS 563

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + ++M   G+K    T+N LI G  K  ++ +S++   +++++ L PS S++  +I +L
Sbjct: 564 EMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQL 623

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+A+ A  +    + KG  P+     HLI G  K+G   E +     M    I P  
Sbjct: 624 CQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKK 683

Query: 304 PAYTSLISSLCQ 315
            A+  L   L Q
Sbjct: 684 AAFEDLAECLIQ 695



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 118/251 (47%), Gaps = 9/251 (3%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I+ +++  A +  + + +A +V +     GF  +S     ++   C  G IEEA  + 
Sbjct: 123 DPISSNMLFEALLDAKAVRAAKMVRDIA---GFIPDSASLEQYVKCLCGVGFIEEAIEVY 179

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE----MIRR 242
            +++ AG++      N ++ GC KA + E    + ++M+  K   +  A  E    +I+ 
Sbjct: 180 FQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMI--KAGTASDANTETVGCLIQA 237

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G   +   +L   L  G  P   TY+ LI G+ +      + ++ + M  ++  PT
Sbjct: 238 FCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPT 297

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y  +I+ LC+  +  EA + F  +K     P   +Y +++    E G+  +A  L  
Sbjct: 298 IYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWF 357

Query: 363 EMVSEGLKPST 373
           EM+ +G++P+ 
Sbjct: 358 EMMDKGMQPNA 368


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 159/368 (43%), Gaps = 52/368 (14%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTL 64
           V FD CR + +    L                   LVW  Y+ +LE   YP        L
Sbjct: 87  VPFDTCRKMLEHLMKLRYFK---------------LVWGFYEEILE-CGYPASLYFFNIL 130

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +   CK G ++    + D I      P V+                              
Sbjct: 131 MHRFCKDGDIRVAQSVFDAITKWGLRPSVV------------------------------ 160

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
                +Y+ ++   +++ +L+    +   ML  G   + + Y+  I   C+  K+++AN 
Sbjct: 161 -----SYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANE 215

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM   GL P   TF  LI+G  K  R++ ++   ++M+S+ LLP    +N +I  LC
Sbjct: 216 LFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLC 275

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G+ KQA+ ++     KG  P++ TY+ LI G  KEG++    K    M  ++I     
Sbjct: 276 KNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDV 335

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AYT+LIS LCQ G+  +A+K  + M S  L P +  Y  ++    +KG+  K   L +EM
Sbjct: 336 AYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEM 395

Query: 365 VSEGLKPS 372
              G  PS
Sbjct: 396 QRNGHAPS 403



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 148/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 102 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 161

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 162 YNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEML 221

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +I + + ++ ++    K   ++ A+ +Y+ ML +    +   Y T I   C+ G ++
Sbjct: 222 VKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLK 281

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 282 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALI 341

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+    +
Sbjct: 342 SGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHA 401

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 402 PSVVTYNVLMNG 413



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA VV+  +L+   +  S  +V++  I AY 
Sbjct: 6   TMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGLITAYL 65

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K +  +    + E+++      S 
Sbjct: 66  ESGFLRDAIECYRLTREHKLWVPFD-TCRKMLEHLMKLRYFKLVWGFYEEILECGYPASL 124

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 125 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 184

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    L+P    + +L+  H + G 
Sbjct: 185 MLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGR 244

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + + M+S+ L P 
Sbjct: 245 VDLAMEIYKRMLSQSLLPD 263


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 140/283 (49%), Gaps = 1/283 (0%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P  +  T+L+  +  E  I + + L   M  K +  D   Y +++    K R    A+ +
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           +E+M K     + F Y   I + C+ G   EA  +  EM  AG+ P    ++ L++G  +
Sbjct: 135 HEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
             R++E+L + ++M  R +      +N +I  L   G  K+    L L +D+GFSP+  T
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           ++ LI G  KEG++ E  ++   M +K   P +  Y +L++ LC  G+LE+A K F+ + 
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              +   V  Y  L+  + +     +A  L EEM  +GLKPST
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPST 356



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 146/316 (46%), Gaps = 1/316 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF    ++  TL+  V   +      +++  M E   + +  T   LI+ LCK  +  
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + + +++ G  C   V     +I  + ++    E + +   M+   ++ D + YS ++
Sbjct: 130 LAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   L+ AL  ++EM  RG SA+ + Y + I      G  +E    +  M + G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TF +LI+G  K  ++ E+    E M  +   P    +N ++  LC  G  + A  +
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                D+G   N  +Y+ LI GY K+ +I E  +L+ EM  K + P+   Y +LI +LCQ
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 316 CGKLEEADKYFKIMKS 331
            G++  A K F  M++
Sbjct: 369 SGRVRTAQKLFVEMQT 384



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 161/330 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  + +E RG S  + ++N+LIH ++++     V      M++    P+  T   LI 
Sbjct: 200 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 259

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G++     +L+ +H K   P ++   +L+  +    ++E+   L + +  + +  
Sbjct: 260 GLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 319

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +  +Y++++    K + ++ A  ++EEM  +G   ++  Y T IGA C+ G++  A  L 
Sbjct: 320 NVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 379

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM+  G      T+ +L++G  K   +EE++   + +   +  P+   F+ ++  +C  
Sbjct: 380 VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRA 439

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A          G  P+ I Y+ LI G   +G + E +KL ++ME K   P    +
Sbjct: 440 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 499

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
             +I +L +  ++ EA +  + M++ +  P
Sbjct: 500 NVIIQNLLKENEIHEAIQLLEEMRNRNFSP 529



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   L  RG  L++ S+N LI+   K  + D  +R+++ M      P+  T  T
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI ALC+ G+++T   +   +  + C   + ++T                          
Sbjct: 362 LIGALCQSGRVRTAQKLF--VEMQTCGQFLKLST-------------------------- 393

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                  Y +++    K  +LE A+ +++ + K     N  V++  +   C  GK+EEA 
Sbjct: 394 -------YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
               E+   GL+P    +N+LI G      + E++    QM  +  LP    FN +I+ L
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            +     +A  +L    ++ FSP+E   S L+
Sbjct: 507 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 72/158 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A D+ + +++     ++  F+ L+  + ++ + +  W+ +  + +N   P+      
Sbjct: 407 LEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 466

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LC  G L   V +L ++  K C P  I    +I  +++E  I E + LL+ M  +N
Sbjct: 467 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 526

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
              D    S+++          +ALV     L++G  +
Sbjct: 527 FSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKGVGS 564


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/393 (23%), Positives = 177/393 (45%), Gaps = 32/393 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L   GF    +S+ TL+  +  S R D V  ++  M+E    PNE T   LI   C+GG 
Sbjct: 239 LPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGM 298

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +L+++    C+    +   +I  I ++ R+++   LL  M       DTI+Y+ 
Sbjct: 299 VERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTT 358

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +    + A  +  EM++     N   + TFI   C+ G IE+A  L+++M   G
Sbjct: 359 VLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHG 418

Query: 194 --------------------------------LKPYDETFNLLIEGCAKAKRIEESLSYC 221
                                            KP   T+  L+ G   A+R++ +    
Sbjct: 419 CTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELV 478

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            +M+     P+   FN ++   C+ G  ++A  ++   ++ G +PN ITY+ L+ G  K+
Sbjct: 479 AEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKD 538

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
              ++ L+L + +  K +SP +  ++S+I  L +  ++EEA + F +++   + P   +Y
Sbjct: 539 CSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVY 598

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             ++    ++     A+     MVS G  P+ S
Sbjct: 599 NKILLGLCKRCEIDNAIDFFAYMVSNGCMPNES 631



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 173/357 (48%), Gaps = 3/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG   +++++  L+  + ++   +    +   M      PN  T   +I+ +C+ G++ 
Sbjct: 171 RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              ++L+R+      P  +  T+L+  +   +R ++   L   M+ KN + + + + +++
Sbjct: 231 DARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +E A+ V E+M + G + N+ +    I + C+ G++++A  L+ +M + G  
Sbjct: 291 RFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCN 350

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++  +++G  +A+R +++     +M+     P+   FN  I  LC+ G  +QA  +
Sbjct: 351 PDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 410

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    + G +   +TY+ L+ G+  +G I   L+L+  M  K   P    YT+L++ LC 
Sbjct: 411 IEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCN 467

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +L+ A +    M      P V  +  LV    +KG   +A+ L E+M+  G  P+
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPN 524



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 145/307 (47%), Gaps = 5/307 (1%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           TL++  C+ G L    D   R+ G    +P     T LI  +    R+ + + LL  MLR
Sbjct: 116 TLVAGYCRYGHL----DAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR 171

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +    + + Y++++ A  +    E A+ V +EM  +G + N   Y   I   C  G++++
Sbjct: 172 RGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 231

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+  + + G +P   ++  L++G   +KR ++      +MM +  +P+   F+ +IR
Sbjct: 232 ARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR 291

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  G  ++A  +L    + G + N    + +I    K+G + +  KL  +M     +P
Sbjct: 292 FFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNP 351

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              +YT+++  LC+  + ++A +    M  ++  P    + + + I  +KG   +A+ L 
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 411

Query: 362 EEMVSEG 368
           E+M   G
Sbjct: 412 EQMSEHG 418



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 6/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R  E  G  + + ++NTL+    +    D   R+   M      P+  T   LI 
Sbjct: 95  AARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIR 151

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G++   + +LD +  + C P V+  T L+  + +    E+ M +L  M  K    
Sbjct: 152 VLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTP 211

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++I+    +   ++ A  +   +   GF  ++  YTT +   C   + ++   L 
Sbjct: 212 NIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELF 271

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM      P + TF++LI    +   +E ++   EQM       + +  N +I  +C+ 
Sbjct: 272 AEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQ 331

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +L      G +P+ I+Y+ ++ G  +     +  +L  EM   +  P    +
Sbjct: 332 GRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTF 391

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            + I  LCQ G +E+A    + M  H    GV  Y +LV     +G+   AL L   M  
Sbjct: 392 NTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPC 451

Query: 367 EGLKPST 373
              KP+T
Sbjct: 452 ---KPNT 455



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 172/367 (46%), Gaps = 3/367 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A  V   + + G + +    N +I+ + K  R D  +++   M      P+  +  
Sbjct: 298 MVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYT 357

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T++  LC+  +     ++L+ +    C P  +   + I  + Q+  IE+ ++L+++M   
Sbjct: 358 TVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEH 417

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                 + Y+ +V       +++SAL ++  M  +    N+  YTT +   C   +++ A
Sbjct: 418 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGA 474

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+ EM      P   TFN+L+    +   +EE++   EQMM     P+   +N ++  
Sbjct: 475 AELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDG 534

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           + +  +++ A  +L   + KG SP+ IT+S +IG  +KE  I+E ++L++ ++   + P 
Sbjct: 535 ITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPK 594

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y  ++  LC+  +++ A  +F  M S+  +P    Y  L+     +G   +A  L  
Sbjct: 595 AVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLS 654

Query: 363 EMVSEGL 369
            + S G+
Sbjct: 655 VLCSRGV 661



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 147/329 (44%), Gaps = 3/329 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +   G +   IS+ T++  + +++R D    +   M+ N   PNE T  T I 
Sbjct: 337 AFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFIC 396

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G ++  + +++++    C+  V+   +L+     +  I+  + L + M  K    
Sbjct: 397 ILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---P 453

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +TI Y+ ++        L+ A  +  EML+     N   +   +  +C+ G +EEA  L+
Sbjct: 454 NTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELV 513

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   G  P   T+N L++G  K    E++L     ++S+ + P    F+ +I  L + 
Sbjct: 514 EQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKE 573

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A  +  +  D G  P  + Y+ ++ G  K  EI   +  +  M      P    Y
Sbjct: 574 DRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTY 633

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV 335
             LI  L   G L+EA     ++ S  ++
Sbjct: 634 IILIEGLAHEGLLKEAQDLLSVLCSRGVL 662



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 4/221 (1%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   + F Y T +  YC YG ++ A  L+  M  A   P   T+  LI       R+ ++
Sbjct: 106 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADA 162

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           LS  + M+ R   P+   +  ++  +C     +QA  +L     KG +PN +TY+ +I G
Sbjct: 163 LSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 222

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             +EG + +  +L   +      P   +YT+L+  LC   + ++ ++ F  M   + +P 
Sbjct: 223 MCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 282

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
              ++ L+      G   +A+ + E+M   G   +T+ LC+
Sbjct: 283 EVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTT-LCN 322



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 8/167 (4%)

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           E  A A R+ E    C+        P      ++IR LC  G    A  +L  A   G  
Sbjct: 54  EDLAGAVRLVERSGSCDGEA-----PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSP 108

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            +   Y+ L+ GY + G +    +L   M    ++P    YT LI  LC  G++ +A   
Sbjct: 109 VDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSL 165

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M      P V  Y  L+          +A+ + +EM ++G  P+
Sbjct: 166 LDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPN 212


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 158/343 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF++   +  +G   SL ++N +I+ + K  R      I   ML     P+  T  
Sbjct: 16  LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 75

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL+   C+        ++   +  +   P ++  +SL+    +   +++ +V  + M + 
Sbjct: 76  TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKF 135

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D + Y+++++   +  N+  AL + +EML++G   +   Y T +   C+   + +A
Sbjct: 136 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 195

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  EM   G  P   TF  LI G  +   + ++LS    M  R + P   A+N +I  
Sbjct: 196 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDG 255

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G  ++A+ +    + +   PN ITY  LI  Y   G + E  +L+  M  K I PT
Sbjct: 256 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 315

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           L    ++I   C+ G   +AD++   M +  + P    Y +L+
Sbjct: 316 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 163/350 (46%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           ++++NTLI    +    +  + I   M +    P+  T   +I+ LCK G+      +L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +     SP      +L++   + +   E   +   MLR+ ++ D +++S ++    + R
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           +L+ ALV + +M K G   ++ +YT  +  YC  G + EA  +  EM   G       +N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++ G  K K + ++    ++M+ R  LP    F  +I   C+ GN  +A  +      +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              P+ + Y+ LI G+ K GE+++  +L+  M  + I P    Y  LI++ C  G + EA
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + + +M    + P +    +++  +   G+ +KA      M+++G+ P 
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 350



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%)

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +LI + C+ G LEEA +    M    L P +  Y +++    +KG  A+A  +  EM
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 365 VSEGLKPSTS 374
           ++ GL P T+
Sbjct: 63  LNIGLSPDTT 72


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 161/320 (50%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG S + +++N LI+ + K +  +  +++ + M      P+  T  T++S LC+ G++ 
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS 201

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                 D +  +  SP V+    L+  + +E + +E M L K ++ K  + DT+ Y+ I+
Sbjct: 202 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSIL 261

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +  N++ A  ++++M+  G + N   Y+  +  +C   K+++A+ +++EM   G  
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N+L++G  K   ++++      M+     P   +++ ++  LC+      A  +
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 381

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +++   P+ +T++ L+ G  K G++ E   L  +M     +P   AY +L++ L +
Sbjct: 382 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRK 441

Query: 316 CGKLEEADKYFKIMKSHSLV 335
            G+  +AD+  + MK    +
Sbjct: 442 QGRHIQADRLTQAMKEKGFL 461



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 173/373 (46%), Gaps = 10/373 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           +LFE   D        G S   I +N LI    K  R D   R+Y+ M+     P+  T 
Sbjct: 29  KLFEQMLD-------NGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTY 81

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-VLLKRML 120
            +L++A CK  +++  +++   +  K   P V+  +++I  + +  ++ E + +L  +M+
Sbjct: 82  NSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMI 141

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +    +T+AY+ ++    K  N+E A  + EEM  +G+  ++  Y T +   C  GK+ 
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS 201

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA      M + G  P    +N L++   K  + +E++   + ++++  +P    +N ++
Sbjct: 202 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSIL 261

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L    N  +A  M    +  G +PN  TYS ++ G+ +  ++ +  K+  EM      
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA-KALH 359
           P +  Y  L+  LC+   +++A + F  M  +   P +  Y S+V   L K NK   A  
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY-SVVLNGLCKTNKVHDARV 380

Query: 360 LCEEMVSEGLKPS 372
           L + M+   L P 
Sbjct: 381 LFDRMIERKLVPD 393



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 169/356 (47%), Gaps = 1/356 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   S+ ++N+L++   K  +      +++ M E    P+  T  T+IS LCK G++   
Sbjct: 73  GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEA 132

Query: 78  VDML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
           ++ML  ++  + CS   +   +LI  + ++E IE    LL+ M  K  + D I Y+ I+ 
Sbjct: 133 LEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILS 192

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +M  +  A   ++ M  RG+S +   Y   + A  + GK +EA  L +++   G  P
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMP 252

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N ++ G A+   ++E+    ++M++    P+ + ++ ++   C       A+ +L
Sbjct: 253 DTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVL 312

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                 G  P+ +TY+ L+ G  K   + +  +L+  M     +P + +Y+ +++ LC+ 
Sbjct: 313 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 372

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            K+ +A   F  M    LVP V  +  L+    + G   +A  L ++M   G  P 
Sbjct: 373 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 148/289 (51%), Gaps = 1/289 (0%)

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
           + CSP       ++    ++ ++ +G  L ++ML   +  D I Y++++    K   ++ 
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A  +YEEM+  G   + + Y + + A+C+  K++EA  L + M   G +P   T++ +I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 207 GCAKAKRIEESLSYC-EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           G  K  ++ E+L     +M+ R    +  A+N +I  LC+  N ++A  +L     KG+ 
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ ITY+ ++ G  + G++ E  + +  M  +  SP + AY  L+ +L + GK +EA K 
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           FK + +   +P    Y S++     K N  +A  + ++MV+ G  P+ +
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 1/318 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T R ++ + CK G+L+    + +++     SP  I    LI    ++ R++E   L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            + M+   +      Y+ ++ A  K   ++ A+ +++ M ++GF  +   Y+T I   C+
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 176 YGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
            GK+ EA   L  +M   G       +N LI G  K + IE +    E+M S+  +P   
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N ++  LC  G   +A         +G+SP+ + Y+ L+    KEG+  E +KL+ ++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             K   P    Y S++  L +   ++EA++ FK M +    P    Y  ++  H      
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 355 AKALHLCEEMVSEGLKPS 372
             A  + EEM   G  P 
Sbjct: 306 DDAHKVLEEMSKIGAVPD 323



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/251 (19%), Positives = 119/251 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG+S  ++++N L+  + K  + D   ++++ ++     P+  T  +++  L +   
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    +M  ++    C+P     + ++    + +++++   +L+ M +   + D + Y++
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   ++ A  ++  M+  G + +   Y+  +   C+  K+ +A  L   M    
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   TFN+L++G  KA +++E+    +QM      P   A+N ++  L + G   QA+
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD 449

Query: 254 GMLTLALDKGF 264
            +     +KGF
Sbjct: 450 RLTQAMKEKGF 460



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/217 (18%), Positives = 98/217 (45%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G+    +++N+++  + +    D    +++ M+ +   PN AT   ++S  C+  ++  
Sbjct: 248 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDD 307

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L+ +      P V+    L+  + +   +++   L   M+      D ++YS+++ 
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +  A V+++ M++R    +   +   +   C+ GK++EA  L+ +M  +G  P
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
               +N L+ G  K  R  ++    + M  +  L  C
Sbjct: 428 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 464



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 58/117 (49%), Gaps = 6/117 (5%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A ++   +   G +  ++S++ +++ + K+++      ++  M+E    P+  T  
Sbjct: 339 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 398

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI------LRIIQEERIEEGM 113
            L+  LCK G+L    D+LD++    C+P  +   +L+       R IQ +R+ + M
Sbjct: 399 ILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 455



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 31/158 (19%), Positives = 74/158 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + + G    ++++N L+  + K++  D    ++  M++N   P+  +   +++
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  ++     + DR+  ++  P V+    L+  + +  +++E   LL +M       
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           D +AY+ ++    K      A  + + M ++GF ++ F
Sbjct: 428 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 172/391 (43%), Gaps = 37/391 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +  ++S+ T+I+   K   +D  +  Y  ML+    P+  T  ++I+ALCKG  +   
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-SLIVY 136
           +++L  +      P  +   S++      E+ +E +  LK+M    +  D + Y SL+ Y
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                R+ E A  +++ M KRG   +   Y T +  Y   G + E + L+  M   G+ P
Sbjct: 311 LCKNGRSTE-ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP 369

Query: 197 YDETFNLLIEGCAKAKRIEESLS-----------------------------------YC 221
               FN+LI   AK ++++E++                                    Y 
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           EQM+   L P+   +  +I  LC      +A  ++   LD+G   N I ++ +I  + KE
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E  KL+  M    + P +  Y++LI   C  GK++EA K    M S  + P    Y
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +L+  +        AL L +EMVS G+ P+
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPN 580



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 165/352 (46%), Gaps = 4/352 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM-LDR 83
           ++  LI    ++ R DL +    ++++        T   L+  LC   +    +D+ L R
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---NMIHDTIAYSLIVYAKVK 140
           +    C P V   T L+  +  E R +E + LL  M          D ++Y+ ++    K
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             + + A   Y EML R  S +   Y++ I A C+   +++A  ++  M   G+ P   T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N ++ G   +++ +E++ + ++M S  + P    +N ++  LC+ G + +A  +     
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G  P+  TY  L+ GYA +G + E+  L   M    I P    +  LI +  +  K++
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA   F  M+ H L P V  Y +++GI  + G+   A+   E+M+ EGL P+
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 183/383 (47%), Gaps = 12/383 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M E    P+  +  
Sbjct: 103 LDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCT 162

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKR---CSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
            L+  LC   + Q  +++L  +   R    +P V+  T++I    +E   ++       M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + YS I+ A  K + ++ A+ V   M+K G   N   Y + +  YC   + 
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP 282

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA   +++M + G++P   T+N L++   K  R  E+    + M  R L P  + +  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           ++     G   + + +L L +  G  P+   ++ LI  YAK+ ++ E + ++ +M    +
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGNKA 355
           +P +  Y ++I  LC+ G +++A  YF+ M    L P + +Y SL  IH     +K +KA
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL--IHSLCIFDKWDKA 460

Query: 356 KALHLCEEMVSEGLKPSTSYLCS 378
           + L L  EM+  G+  +T +  S
Sbjct: 461 EELIL--EMLDRGICLNTIFFNS 481



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 162/356 (45%), Gaps = 2/356 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G   + +++N+++H    S++        + M  +   P+  T  +L+ 
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+      + D +  +   P +    +L+     +  + E   LL  M+R  +  
Sbjct: 310 YLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP 369

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +++++ A  K   ++ A++V+ +M + G + N   Y   IG  C+ G +++A    
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + GL P    +  LI       + +++     +M+ R +  +   FN +I   C+ 
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   ++  +  L +  G  PN ITYS LI GY   G++ E  KL   M    + P    Y
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKAKALHL 360
            +LI+  C+  ++++A   FK M S  + P +  Y  ++    H  +   AK L++
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 605



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 156/325 (48%), Gaps = 4/325 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI    K ++ D    ++  M ++   PN  T   +I  LCK G +   +   +++ 
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI 433

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  +P +IV TSLI  +   ++ ++   L+  ML + +  +TI ++ I+++  K   + 
Sbjct: 434 DEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVI 493

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   N   Y+T I  YC  GK++EA  L+  M + G+KP   T+N LI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  +  R++++L+  ++M+S  + P+   +N +++ L        A  +       G  
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673

Query: 326 FKIMKSHSLVPGVDIY----ESLVG 346
           F    S+ LVP    Y    E+++G
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIG 698



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 152/326 (46%), Gaps = 1/326 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G    ++++N+L+  + K+ R+    +I+  M +    P+ AT  TL+ 
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQ 344

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V   LI    ++E+++E M++  +M +  +  
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y  ++    K  +++ A++ +E+M+  G + N  VYT+ I + C + K ++A  L+
Sbjct: 405 NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I    K  R+ ES    + M+   + P+   ++ +I   C  
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L+     G  P+ +TY+ LI GY +   + + L L+ EM    +SP +  Y
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584

Query: 307 TSLISSLCQCGKLEEADK-YFKIMKS 331
             ++  L    +   A + Y  I KS
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKS 610



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 9/327 (2%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y EQ    G + ++I + +LIH +   D+ D    +   ML+     N     ++I
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P VI  ++LI       +++E   LL  M   
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVK---PNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            M  D + Y+ ++    ++  ++ AL +++EM+  G S N   Y   +       +   A
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  PN  TY  +      +G ++E+ +L++ ME    +  
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVD 720

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM 329
                 ++  L Q G++  A  Y  ++
Sbjct: 721 SGMLNFIVRELLQRGEITRAGTYLSMI 747



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/282 (20%), Positives = 123/282 (43%), Gaps = 50/282 (17%)

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG---LKPYDETF 201
           E A  V++E+L+RG  A+ +     +     +     A      M  AG   + P   T+
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 202 NLLIEGCAKAKRIE----------------ESLSYC--------------------EQMM 225
            +LI  C +A R++                E++++                      +M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK---GFSPNEITYSHLIGGYAKEG 282
               +P   +   +++ LC+   +++A  +L +  D    G +P+ ++Y+ +I G+ KEG
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +  +    Y+EM  + ISP +  Y+S+I++LC+   +++A +    M  + ++P    Y 
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST-------SYLC 377
           S++  +       +A+   ++M S+G++P          YLC
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLC 312



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 6/163 (3%)

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           K+ P+   +  +I   C  G        L   + KGF    IT++ L+ G   +    + 
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 288 LKLYY-EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM---KSHSLVPGVDIYES 343
           + +    M   S  P + + T L+  LC   + +EA +   +M   +     P V  Y +
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS--ASTCRG 384
           ++    ++G+  KA     EM+   + P      S  A+ C+G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 2/363 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL ++ + V + + + G   ++  +N LIH   KS   +    +   M     +P+  T 
Sbjct: 179 RLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTY 238

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLIS  CK G     + + DR+  +   P ++   SLI    +E R+ E M L K +  
Sbjct: 239 NTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI-- 296

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           ++   + + Y+ ++    ++ +L+ AL + EEM  +G       Y + +   CE G+I +
Sbjct: 297 RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRD 356

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           AN L+ EM    ++P + T N LI    K   ++ +L    +M+   L      +  +I 
Sbjct: 357 ANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIH 416

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+      A  +L   LD GFSP+  TYS L+ GY  +   + VLKL  E   K +  
Sbjct: 417 GFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCV 476

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y +LI   C+  +++ A K F +M+    +    IY SL   + + G    A  L 
Sbjct: 477 DKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLL 536

Query: 362 EEM 364
           +EM
Sbjct: 537 DEM 539



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 20/353 (5%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
            +  SL S  T+IH++TK        +  Q +LE I Y +  + ++++SAL +   L   
Sbjct: 73  NYKHSLQSSWTMIHILTKFKH----LKTAQSLLEKIAYRDFLSTQSVLSALVR---LHDD 125

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D    I+    S +VIV  +  ++       +E + + + M+         A ++++ +
Sbjct: 126 PD----INSHVFSWLVIVYANTKMK-------QEAIQVFEHMMVNGFRPHLHACTVLLNS 174

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R  +    VY++M + G  AN  VY   I A C+ G +E+A+ L+ EME+  + P 
Sbjct: 175 LAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPD 234

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI    K     E+LS  ++M    + P    +N +I   C+ G  ++A  +  
Sbjct: 235 LFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFK 294

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D   +PN +TY+ LI GY +  ++ + L+L  EME + + PT+  Y S++  LC+ G
Sbjct: 295 EIRDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIG 352

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           ++ +A+K    M    + P      +L+  + + G+   AL +   MV  GLK
Sbjct: 353 RIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLK 405



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 2/306 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +E+ G    ++++N+LIH   K  R     R+++ + +    PN  T  TLI 
Sbjct: 254 ALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNHVTYTTLID 311

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+   L   + + + +  +   P V+   S++ ++ +  RI +   LL  M  K +  
Sbjct: 312 GYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEP 371

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +  + ++ A  K+ +++SAL V   M++ G   + F Y   I  +C+  +++ A  L+
Sbjct: 372 DNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELL 431

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M +AG  P   T++ L++G    +  E  L   ++ + + L    S +  +IRR C+ 
Sbjct: 432 LSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKR 491

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                A  + +L  +KG   + + Y+ L   Y K G+      L  EM  + +  TL  Y
Sbjct: 492 EQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIY 551

Query: 307 TSLISS 312
            +L +S
Sbjct: 552 RALNAS 557



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 122/245 (49%), Gaps = 4/245 (1%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            ++ +IVYA  KM+  + A+ V+E M+  GF  +    T  + +  +    +    + ++
Sbjct: 133 FSWLVIVYANTKMK--QEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKK 190

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G++     +N+LI  C K+  +E++ +   +M S+ + P    +N +I   C+ G 
Sbjct: 191 MARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGM 250

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +      +G  P+ +TY+ LI G+ KEG ++E ++L+ E+  +  +P    YT+
Sbjct: 251 HYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVTYTT 308

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI   C+   L++A +  + M++  L P V  Y S++    E G    A  L  EM  + 
Sbjct: 309 LIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKK 368

Query: 369 LKPST 373
           ++P  
Sbjct: 369 IEPDN 373



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 19/267 (7%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF-----------------SANSFV 165
           N  H   +   +++   K ++L++A  + E++  R F                   NS V
Sbjct: 73  NYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDINSHV 132

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           ++  +  Y      +EA  + + M   G +P+     +L+   AK +  +      ++M 
Sbjct: 133 FSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMA 192

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              +  +   +N +I   C+ G+ ++A+ +L+    K   P+  TY+ LI  Y K+G   
Sbjct: 193 RIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHY 252

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E L +   ME + I P +  Y SLI   C+ G++ EA + FK ++  +  P    Y +L+
Sbjct: 253 EALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNHVTYTTLI 310

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +    +  +AL L EEM ++GL P+
Sbjct: 311 DGYCRLNDLDQALRLREEMEAQGLYPT 337



 Score = 37.7 bits (86), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 64/167 (38%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + + G  L   ++  LIH   K    D    +   ML+    P+  T   L+ 
Sbjct: 392 ALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVD 451

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C     +  + + D    K       +  +LI R  + E+++    +   M  K  + 
Sbjct: 452 GYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLG 511

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           D++ Y+ + YA  K+    +A  + +EM KR       +Y     +Y
Sbjct: 512 DSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNASY 558


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 172/356 (48%), Gaps = 6/356 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGF+ S ++FNT+I  + K  +      ++  M E    P+E T RTL    CK G +Q 
Sbjct: 501 RGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQE 560

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +   +  +  S  + +  SLI  + +  ++ +   LL  M  + +  + + Y  ++ 
Sbjct: 561 AFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLIS 620

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG-LK 195
                + L+ A  +Y EM++RGF+ N  V +  + +     +I EA  ++ +M +   L 
Sbjct: 621 GWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA 680

Query: 196 PYDETFNLLIEG--CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +++  + L++     +A++I +SL   +   S   L +   +N  I  LC+ G   +A 
Sbjct: 681 VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNS---LSNNIVYNIAIDGLCKSGKLDEAR 737

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L++ + +GF P+  TY  LI   +  G + E  KL  EM  K + P +  Y +LI+ L
Sbjct: 738 SVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGL 797

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+ G ++ A + F  +    LVP    Y  L+G +   G+  KA  L E+M  EG+
Sbjct: 798 CKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 163/336 (48%), Gaps = 1/336 (0%)

Query: 38  RNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNT 97
           R D+   + + M++    PN  T   L++     G  +    +L  +  +  S  V+  T
Sbjct: 241 RVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCT 300

Query: 98  SLILRIIQEERIEEGMVLLKRMLRKNM-IHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
            L+    ++ +++E   LL+ +    + + D   Y ++V    +M  +E A+ + +EML+
Sbjct: 301 MLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLR 360

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G   N  +  T I  YC+ G++ EA  +   M +  LKP   ++N L++G  +  ++ +
Sbjct: 361 VGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSK 420

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +   CE+M+   + P+   +N +I+ L + G+   A  +  L +++G +PNEI+   ++ 
Sbjct: 421 AFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLD 480

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            + K G+    + L+ E+  +  + +  A+ ++IS LC+ GKL EA   F  MK   L P
Sbjct: 481 CFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               Y +L   + + GN  +A  +   M  + +  S
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSAS 576



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 43/413 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA +V   + + G   +++++N L++        + V R+ + M E     N  T   L
Sbjct: 243 DVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTML 302

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS----LILRIIQEERIEEGMVLLKRML 120
           +   CK G++     +L  +       +++V+      L+    Q  R+E+ + +   ML
Sbjct: 303 MRGYCKKGKMDEAEKLLREVEEDE---LLVVDERVYGVLVDGYCQMGRMEDAVRIRDEML 359

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R  +  + +  + ++    K+  +  A  V+  M+      + + Y T +  YC  GK+ 
Sbjct: 360 RVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVS 419

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP--------- 231
           +A  L +EM   G+ P   T+N +I+G       +++L     M+ R + P         
Sbjct: 420 KAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTML 479

Query: 232 --------------------------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
                                     S  AFN MI  LC+ G   +A  +     + G S
Sbjct: 480 DCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLS 539

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+EITY  L  GY K G +QE  ++   ME +++S ++  Y SLI  L +  KL +    
Sbjct: 540 PDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDL 599

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
              M++  L P V  Y +L+    ++    KA HL  EM+  G  P+   +CS
Sbjct: 600 LVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNV-VVCS 651



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 176/372 (47%), Gaps = 7/372 (1%)

Query: 7   AFDVCRYL----EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           A+ VC ++    ++ GF   +  F+ L+    +         ++  M    R P   +  
Sbjct: 138 AYAVCNHVFSVYKEFGFCSGV--FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCS 195

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+  L + G+ +  V + D+I G    P V + + ++    Q  R++  M +L++M+++
Sbjct: 196 FLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKE 255

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + Y+ +V   V   + E    V   M +RG S N    T  +  YC+ GK++EA
Sbjct: 256 GLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEA 315

Query: 183 NCLMQEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
             L++E+E   L   DE  + +L++G  +  R+E+++   ++M+   L  +    N +I+
Sbjct: 316 EKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIK 375

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G   +A  +    +D    P+  +Y+ L+ GY +EG++ +   L  EM    I+P
Sbjct: 376 GYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITP 435

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           T+  Y ++I  L   G  ++A   + +M    + P      +++    + G+  +A+ L 
Sbjct: 436 TVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLW 495

Query: 362 EEMVSEGLKPST 373
           +E++  G   ST
Sbjct: 496 KEILGRGFTKST 507



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 155/322 (48%), Gaps = 6/322 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++++  NTLI    K  +     R++  M++    P+  +  TL+   C+ G++   
Sbjct: 362 GLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             + + + G   +P V+   ++I  ++     ++ + L   M+ + +  + I+   ++  
Sbjct: 422 FMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDC 481

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             KM + + A+++++E+L RGF+ ++  + T I   C+ GK+ EA  +   M+  GL P 
Sbjct: 482 FFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPD 541

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           + T+  L +G  K   ++E+      M  + +  S   +N +I  L +         +L 
Sbjct: 542 EITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLV 601

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +G SPN +TY  LI G+  E ++ +   LY+EM  +  +P +   + ++SSL +  
Sbjct: 602 EMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDD 661

Query: 318 KLEEA----DKY--FKIMKSHS 333
           ++ EA    DK   F I+  H+
Sbjct: 662 RISEATVILDKMLDFDILAVHN 683



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 151/306 (49%), Gaps = 24/306 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +E++  S S+  +N+LI  + K  + + V  +   M      PN  T  TLIS
Sbjct: 561 AFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLIS 620

Query: 67  ALCKGGQLQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             C   +L      Y +M++R      +P V+V + ++  + +++RI E  V+L +ML  
Sbjct: 621 GWCDEQKLDKAFHLYFEMIERGF----TPNVVVCSKIVSSLYRDDRISEATVILDKMLDF 676

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS--------ANSFVYTTFIGAYC 174
           ++        L V+ K   + +++ L +  + +             +N+ VY   I   C
Sbjct: 677 DI--------LAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLC 728

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           + GK++EA  ++  + + G  P + T+  LI  C+ +  ++E+    ++M+ + L+P+ +
Sbjct: 729 KSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNIT 788

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +I  LC+ GN  +A  +      KG  PN +TY+ LIG Y + G++ +  +L  +M
Sbjct: 789 IYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKM 848

Query: 295 EYKSIS 300
             + IS
Sbjct: 849 TEEGIS 854



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/372 (21%), Positives = 160/372 (43%), Gaps = 8/372 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +C  +   G + +++++NT+I  +      D    ++  M+E    PNE +  T++ 
Sbjct: 421 AFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLD 480

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G     + +   I G+  +   +   ++I  + +  ++ E   +  RM    +  
Sbjct: 481 CFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I Y  +     K  N++ A  +   M ++  SA+  +Y + I    +  K+ +   L+
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLL 600

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM+  GL P   T+  LI G    ++++++     +M+ R   P+    ++++  L   
Sbjct: 601 VEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRD 660

Query: 247 GNAKQANGMLTLALDKGFSPNEI-TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP- 304
               +A    T+ LDK    + +  ++       K     E  K+   ++   I  +L  
Sbjct: 661 DRISEA----TVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSN 716

Query: 305 --AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y   I  LC+ GKL+EA     ++ S   +P    Y +L+      GN  +A  L +
Sbjct: 717 NIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRD 776

Query: 363 EMVSEGLKPSTS 374
           EM+ +GL P+ +
Sbjct: 777 EMLEKGLIPNIT 788


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 178/407 (43%), Gaps = 36/407 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +  +L + G   +L + N LI  + K  R     R+++ M      PNE T   LI 
Sbjct: 319 AFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIH 378

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LCK G +   + M DR+  K     V    SLI    Q +   +   LL  M+ K +  
Sbjct: 379 SLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAP 438

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              +YS ++    +  +L SA+ ++ EM + G S N + +TT I  +C+ G ++EA  L 
Sbjct: 439 SAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLF 498

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M ++ + P + TFN++IEG  +   + ++    +QM+ R L P    +  +I  LC  
Sbjct: 499 DKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLT 558

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
             A +A   +    +     N  + + L+ G+ KEG + E   ++ EM  + +   L ++
Sbjct: 559 LGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISF 618

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH------- 359
           T ++ +  +    E+    F+ MK   + P    +  ++ +H ++ N  +AL+       
Sbjct: 619 TVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIA 678

Query: 360 ----------------------------LCEEM-VSEGLKPSTSYLC 377
                                       LCEEM V   L  S +Y C
Sbjct: 679 DGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNC 725



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 179/403 (44%), Gaps = 37/403 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL-I 65
           A DV R     G ++   + + ++  + K  +  L   ++  M++  ++P +  + T  I
Sbjct: 144 AADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQ-CKFPLDEYVYTAGI 202

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A C+   L     +L R+  K      +    L+  + +  R+ E + +   M+ + ++
Sbjct: 203 RAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIV 262

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEML-------------------KRG-------- 158
            D + Y  +VY   +   LE AL + ++ML                   KRG        
Sbjct: 263 ADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRL 322

Query: 159 --------FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
                      N F     I   C+  +  EA  L + M N GL+P + T+ +LI    K
Sbjct: 323 ACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCK 382

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              ++++L   ++M  + +  +   +N +I   C+  N  QA G+L   ++KG +P+  +
Sbjct: 383 RGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAAS 442

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           YS LI G  ++G++   ++L+ EM    +S  +  +T+LIS  C+ G ++EA + F  M 
Sbjct: 443 YSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMI 502

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             S+VP    +  ++  +   GN  KA  L ++MV  GL P  
Sbjct: 503 DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDN 545



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/364 (20%), Positives = 172/364 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + +RG     +++ TL++   +++  ++   +   ML     P+ A+   ++ 
Sbjct: 249 AVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVD 308

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K G +     +   +      P +    +LI ++ ++ R  E   L + M  + +  
Sbjct: 309 GLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEP 368

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++++++  K   ++ AL +++ M ++G     + Y + I  YC++    +A  L+
Sbjct: 369 NEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLL 428

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   GL P   +++ LI G  +   +  ++    +M    +  +   F  +I   C+ 
Sbjct: 429 NEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKD 488

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN  +A  +    +D    PNE+T++ +I GY + G +++  +LY +M  + ++P    Y
Sbjct: 489 GNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTY 548

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLIS LC      +A ++   ++++ +V       +L+    ++G   +  H+ +EM +
Sbjct: 549 RSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRA 608

Query: 367 EGLK 370
            G+K
Sbjct: 609 RGVK 612



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 150/334 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E +G   S + +N L++ + +++R      +   M+E     +E T RTL+   C+  +
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  ++M D +      P V   + ++  + +   I++   L   +    M+ +  A + 
Sbjct: 281 LEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNA 340

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K R    A  ++  M  RG   N   Y   I + C+ G +++A C+   M   G
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++     +N LI G  +     ++     +M+ + L PS ++++ +I  LC  G+   A 
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G S N  T++ LI G+ K+G + E  +L+ +M   S+ P    +  +I   
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           C+ G + +A + +  M    L P    Y SL+ +
Sbjct: 521 CRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISV 554



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/395 (22%), Positives = 175/395 (44%), Gaps = 36/395 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + + G S ++ +F TLI    K    D   R++  M+++   PNE T   +I 
Sbjct: 459 AMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIE 518

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSP-------------------------------MVIV 95
             C+ G ++    + D++  +  +P                                V++
Sbjct: 519 GYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVL 578

Query: 96  N----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
           N    T+L+    +E R+ E   +   M  + +  D I++++IVYA +K+ + E   V++
Sbjct: 579 NSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLF 638

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            EM ++G   ++  +T  I  + +   I +A     +M   G  P   T+ +LI    K+
Sbjct: 639 REMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKS 698

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             +  +   CE+M+  + LP+   +N  +  L   G  ++A  +L   + +G   N +T+
Sbjct: 699 GYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAK-VLHATILEGCLANTVTF 757

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + LI G+ K G+IQ  + L          P   +Y+++I+ LC+ G + +A + +  M  
Sbjct: 758 NTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLY 817

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L P +  Y  L+      G   K L +  +MV+
Sbjct: 818 KGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVN 852



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 162/348 (46%), Gaps = 2/348 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G  +++  +N+LI+   + D       +   M+E    P+ A+   LI+ LC+ G 
Sbjct: 396 MREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGD 455

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L + +++   +     S  V   T+LI    ++  ++E   L  +M+  +++ + + +++
Sbjct: 456 LASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNV 515

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    ++ N+  A  +Y++M+ RG + +++ Y + I   C      +A   + ++EN  
Sbjct: 516 MIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNC 575

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +     +   L+ G  K  R+ E+    ++M +R +     +F  ++    +  + ++ +
Sbjct: 576 VVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKIS 635

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     +KG  P+ + ++ +I  ++KE  I + L  + +M     SP +  YT LI+ L
Sbjct: 636 VLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHL 695

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG--NKAKALH 359
           C+ G L  A    + M     +P    Y   +     +G   KAK LH
Sbjct: 696 CKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLH 743



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 122/263 (46%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           R  +   +L+  L   +       S I++A +K+R    A  +++EM++  F  + +VYT
Sbjct: 140 RARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYT 199

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I AYCE   ++ A  L+  ME+ G+K     +N+L+ G  +  R+ E++     M+ R
Sbjct: 200 AGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER 259

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            ++     +  ++   C     + A  M    L   F P+  + S ++ G  K G I + 
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA 319

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            +L   +    + P L A  +LI  LC+  +  EA++ F+ M +  L P    Y  L+  
Sbjct: 320 FRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHS 379

Query: 348 HLEKGNKAKALHLCEEMVSEGLK 370
             ++G    AL + + M  +G++
Sbjct: 380 LCKRGMMDDALCMFDRMREKGIR 402



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/392 (21%), Positives = 164/392 (41%), Gaps = 36/392 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G + S  S++ LI  + +         +++ M  N    N  T  TLIS  CK G + 
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-SLI 134
               + D++      P  +    +I    +   + +   L  +M+ + +  D   Y SLI
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 135 ---------VYAKVKMRNLESALVV-------------------------YEEMLKRGFS 160
                    + AK  + +LE+  VV                         ++EM  RG  
Sbjct: 553 SVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVK 612

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
            +   +T  + A  +    E+ + L +EM+  G+KP +     +I+  +K + I ++L+ 
Sbjct: 613 LDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNC 672

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            ++M++    P+   +  +I  LC+ G    A  +    L   F PN  TY+  +   A 
Sbjct: 673 WDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLAN 732

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           EGE+++   L+  +    ++ T+  + +LI   C+ G+++ A    +        P    
Sbjct: 733 EGELEKAKVLHATILEGCLANTV-TFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCIS 791

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           Y +++    + G+  KA  L  EM+ +GLKP 
Sbjct: 792 YSTIINELCKVGDINKAFQLWNEMLYKGLKPD 823



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 1/217 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R ++++G     +    +I V +K +        +  M+ +   PN  T   LI+ LCK 
Sbjct: 639 REMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKS 698

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L +   + + +   R  P        +  +  E  +E+  VL   +L +  + +T+ +
Sbjct: 699 GYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTF 757

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    K   ++ A+ + +   + GF  +   Y+T I   C+ G I +A  L  EM  
Sbjct: 758 NTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLY 817

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            GLKP    +N+LI  C      ++ L     M++ K
Sbjct: 818 KGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLK 854


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 158/340 (46%), Gaps = 6/340 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ +   F +   +   G S    + N L++ +   +R    +  +  +L     PN  T
Sbjct: 82  IKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVT 141

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LC   ++     +  R+    C+P V+   +LI  +     I   + L + ML
Sbjct: 142 YNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML 201

Query: 121 RK------NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
                   N   + I Y++IV    K+   + A  ++EEM  +G   +   Y + I  +C
Sbjct: 202 NDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFC 261

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             GK EE+  L+ EM + GL+P   TFN+LI+   K  ++ E+      M+   ++P   
Sbjct: 262 CAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLV 321

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +I   C  G+   A  +      KG  P+ I+Y+ LI GY+K  +++E +KLY EM
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
                 P +  Y SL+  +   GK+++A K F +MK+H +
Sbjct: 382 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 421



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 166/365 (45%), Gaps = 6/365 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI-RY-----PNEATIRTLISA 67
           +++ G +  ++++ TLI  +  +   ++  +++Q ML +I RY     PN  T   ++  
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK G+      + + +  +   P +I   SLI       + EE   LL  ML + +  D
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            + +++++    K   +  A  +   M++ G   +   Y + I  +C  G +  A  L  
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            M + G +P   ++N+LI G +K  ++EE++    +M+     P+   ++ +++ +   G
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 404

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               A  + ++    G + N  TY   + G  K   + E +KL+ E++  +    +    
Sbjct: 405 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 464

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            LI  LC+ GKLE A + F+ + +    P V  Y  ++     +G   KA  L ++M + 
Sbjct: 465 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524

Query: 368 GLKPS 372
           G  P 
Sbjct: 525 GCTPD 529



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 164/363 (45%), Gaps = 6/363 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           +RG+S +++++NTLI  +    R     R++  M +    P+  T  TLI  LC  G   
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191

Query: 74  --LQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             L+ + +ML+ I  +   C P VI    ++  + +  R +E   L + M  + MI   I
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +Y+ +++        E +  + +EML +G   +   +   I   C+ GK+ EA  L+  M
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 311

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
             +G+ P   T+N LIEG      +  +      M S+   P   ++N +I    +    
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +    L  G  PN ITY  L+ G    G++ +  KL+  M+   I+     Y   
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 431

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC+   L EA K F  +KS +    ++    L+    + G    A  L E++ +EG 
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491

Query: 370 KPS 372
           +P+
Sbjct: 492 EPN 494



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 13/329 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G    +++FN LI  + K  +     ++   M+E+   P+  T  +LI   C  G L 
Sbjct: 278 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLN 337

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML----RKNMI-HDTIA 130
           +  ++   +  K C P VI    LI    +  ++EE M L   ML    R N+I +D++ 
Sbjct: 338 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 397

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
             + +  KV     + A  ++  M   G + NS+ Y  F+   C+   + EA  L  E++
Sbjct: 398 KGIFLAGKV-----DDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           ++  K   E  N LI+G  KA ++E +    E++ +    P+   +  MI   C  G   
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +AN ++      G +P+ ITY+ L+ G+ +  +++EV++L + M  K +SP     + ++
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
             L +  K +E      ++    +  GVD
Sbjct: 573 DMLSKDEKYQEC---LHLLPRFPIQKGVD 598



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 154/348 (44%), Gaps = 2/348 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G   S+IS+N+LIH    + + +   R+   ML+    P+  T   LI  LCK G+
Sbjct: 241 MKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGK 300

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L  +      P ++   SLI        +     L   M  K    D I+Y++
Sbjct: 301 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +E A+ +Y EML  G   N   Y + +      GK+++A  L   M+  G
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 420

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +     T+ + ++G  K   + E++    ++ S          N +I  LC+ G  + A 
Sbjct: 421 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 480

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G  PN +TY+ +I G+ +EG++ +   L  +ME    +P +  Y +L+   
Sbjct: 481 ELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGF 540

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHL 360
            +  KLEE  +    M    + P   I  S+V   L K  K  + LHL
Sbjct: 541 YESNKLEEVVQLLHRMAQKDVSPDA-ITCSIVVDMLSKDEKYQECLHL 587



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 6/260 (2%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+R        +++ ++    K+++      +Y +M   G S++       +   C   +
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           + E       +   G  P   T+N LI+G     RI E+     +M      P    +  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 239 MIRRLCECGNAKQANGMLTLALDK------GFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
           +I+ LC  GN   A  +    L+          PN ITY+ ++ G  K G   E  +L+ 
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM+ + + P++ +Y SLI   C  GK EE+ +    M    L P +  +  L+    ++G
Sbjct: 240 EMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEG 299

Query: 353 NKAKALHLCEEMVSEGLKPS 372
              +A  L   M+  G+ P 
Sbjct: 300 KVIEAKKLLGVMIESGIVPD 319



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 8/212 (3%)

Query: 169 FIGAYCEYGKIEEANCL--MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           F   +C+ G +   + L     M  +   P   +FN L+ G AK K   +  S   QM  
Sbjct: 38  FFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRL 97

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
             L       N ++  LC     ++        L +G+SPN +TY+ LI G   E  I E
Sbjct: 98  SGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISE 157

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH------SLVPGVDI 340
             +L+  M+    +P +  Y +LI  LC  G +  A K  + M +       +  P V  
Sbjct: 158 ATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVIT 217

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           Y  +V    + G + +A  L EEM ++G+ PS
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPS 249


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 182/435 (41%), Gaps = 76/435 (17%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   G+  S++++ TLI  + KS   D    + Q M +    PN  T   LI  LCK  +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               +  + R+    C P ++   SLI  +    R+++  ++L+ ++R     + I YS 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 134 IVYAKVKMRNLESA---------------LVVY----------------------EEMLK 156
           +V    + R L+ A               LVVY                      +EM++
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G   +   Y TFI   C+ GK+++   +++EM+  G+ P   TF  +I G  KA RI++
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 217 SLSYCEQMMSRKLLPSCSAF-------------------------------------NEM 239
           +    + M+ R  +P    +                                     N  
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKS 298
           I  LC  G    A  +L   ++ G  PN ++Y+ +I G  K G + +  KL  +M +   
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL-VPGVDIYESLVGIHLEKGNKAKA 357
             P +  + +LIS  C+ G+L +A +    MK+ ++ VP V  Y +L+    + G+  +A
Sbjct: 361 CKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQA 420

Query: 358 LHLCEEMVSEGLKPS 372
             L +EM + G KP+
Sbjct: 421 KLLLQEMQAVGCKPN 435



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 51/371 (13%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           R    M+E+ R P+  T  T IS LCK G+L   ++ML+ +      P V+   S+I  +
Sbjct: 173 RDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGL 232

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM--LKRGFSA 161
            +  RI++   + K ML +  + D++ YS+++    +   L++   V E M  +K G   
Sbjct: 233 CKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVM 292

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
             + +  FIGA C  GK   A  ++  M  +G  P   ++N +I+G  K+  ++++    
Sbjct: 293 EVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWK-- 350

Query: 222 EQMMSRKLL------PSCSAFNEMIRRLCECGNAKQANGMLTLALDK------------- 262
              +SRK+L      P    FN +I   C+ G   QA+ +L     K             
Sbjct: 351 ---LSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTL 407

Query: 263 -----------------------GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
                                  G  PN +TY+ LI GYAK G  +E   L+ EM  K  
Sbjct: 408 IDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGC 467

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS--LVPGVDIYESLVGIHLEKGNKAKA 357
            P +  Y +++S+  + G + +A+  ++ +K+ +    P    Y  L+  +    +  + 
Sbjct: 468 FPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQG 527

Query: 358 LHLCEEMVSEG 368
           L L +EM + G
Sbjct: 528 LTLLQEMTARG 538



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/397 (21%), Positives = 173/397 (43%), Gaps = 42/397 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G    +++F ++I  + K++R D  +++++ MLE    P+  T   ++  L +  +
Sbjct: 213 MDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANR 272

Query: 74  LQTYVDMLDRIHGKR--CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           L T  ++L+ +   +  C   V  + + I  + +  +      +L  M+    + + ++Y
Sbjct: 273 LDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSY 332

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGF-SANSFVYTTFIGAYCE--------------- 175
           + ++    K  N++ A  +  +ML  G    +   + T I  +C+               
Sbjct: 333 NFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMK 392

Query: 176 ---------------------YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
                                +G +++A  L+QEM+  G KP   T+  LI G AK    
Sbjct: 393 AKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMY 452

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF--SPNEITYS 272
           EE+ S  ++M ++   P    +N ++    + G   +A G+     +K    SP+ ITY 
Sbjct: 453 EEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYR 512

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL-EEADKYFKIMKS 331
            LI GY +  + ++ L L  EM  +  S     Y  LI+ L +  ++  +A   ++ M  
Sbjct: 513 ILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLD 572

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
              VP   I+ SLV + L  G+   A  + +EM  +G
Sbjct: 573 QDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 2/227 (0%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M   G+ A+   YTT I   C+ G ++ A  L+Q+M +AG  P   T+  LI+G  KA+R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
             +++   ++M+     P    +N +I  LC       A  +L   +  GF+PN ITYS 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ--CGKLEEADKYFKIMKS 331
           L+    +   + +   L  EM  +     L  Y   I   C+  C       +    M  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
              +P V  Y + +    + G   K L + EEM   G+ P     CS
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCS 227



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 140/300 (46%), Gaps = 5/300 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN-IRYPNEATIR 62
           F +A ++   + + G   +L+S+N +I  + KS   D  W++ + ML++    P+     
Sbjct: 310 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 369

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           TLIS  CK G+L     +L  +  K  C P V+   +LI    +   +++  +LL+ M  
Sbjct: 370 TLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQA 429

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                + + Y+ ++    K    E A  +++EM  +G   +   Y T + A+ + G + +
Sbjct: 430 VGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSK 489

Query: 182 ANCLMQEMENAG--LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           A  + Q+++N      P   T+ +LI+G  +A+  E+ L+  ++M +R        +N +
Sbjct: 490 AEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVL 549

Query: 240 IRRLCECGNA-KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           I +L E      +A  +    LD+   P+   ++ L+  + + G++     +  EM  K 
Sbjct: 550 IAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/194 (19%), Positives = 77/194 (39%), Gaps = 38/194 (19%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEAT 60
           ++E A  +   +  +G    +I++NT++   +K+        +YQ +     Y  P+  T
Sbjct: 451 MYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAIT 510

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            R LI   C+                                    E  E+G+ LL+ M 
Sbjct: 511 YRILIDGYCRA-----------------------------------EDTEQGLTLLQEMT 535

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLES-ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            +    D+  Y++++    +   + S AL VY++ML +    ++ ++ + +  +   G +
Sbjct: 536 ARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDV 595

Query: 180 EEANCLMQEMENAG 193
             A  ++QEM   G
Sbjct: 596 NSARSMVQEMNEKG 609


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 36/372 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D  R + +RGF + ++S N ++  ++  D+ ++  R+   +L+    PN  T  TLI+
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLIN 294

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G++    D+   +  +   P +I  ++LI    +   +  G  L  + L K +  
Sbjct: 295 GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + +S  +   VK  +L +A VVY+ ML +G S N   YT  I   C+ G+I EA  + 
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            ++   G++P   T++ LI+G                                    C+C
Sbjct: 415 GQILKRGMEPSIVTYSSLIDG-----------------------------------FCKC 439

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN +    +    +  G+ P+ + Y  L+ G +K+G +   ++   +M  +SI   +  +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI   C+  + +EA K F++M  + + P V  + +++ + + +G   +AL L   M  
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559

Query: 367 EGLKPSTSYLCS 378
            GL+P     C+
Sbjct: 560 MGLEPDALAYCT 571



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 183/407 (44%), Gaps = 38/407 (9%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R++E AF +   + +RG   S++++++LI    K       + +Y+ M++ + YP +  I
Sbjct: 406 RIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVI 463

Query: 62  -RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L+  L K G +   +    ++ G+     V+V  SLI    +  R +E + + + M 
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK-- 178
              +  D   ++ ++   +    LE AL ++  M K G   ++  Y T I A+C++ K  
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583

Query: 179 ---------------------------------IEEANCLMQEMENAGLKPYDETFNLLI 205
                                            IE+A+     +    ++P   T+N +I
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G    +R++E+    E +      P+      +I  LC+  +   A  M ++  +KG  
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN +TY  L+  ++K  +I+   KL+ EM+ K ISP++ +Y+ +I  LC+ G+++EA   
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           F       L+P V  Y  L+  + + G   +A  L E M+  G+KP 
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 151/339 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+ + +EQRG    LI+++TLI    K+    +  +++   L      +     + I 
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G L T   +  R+  +  SP V+  T LI  + Q+ RI E   +  ++L++ M  
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + YS ++    K  NL S   +YE+M+K G+  +  +Y   +    + G +  A    
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M    ++     FN LI+G  +  R +E+L     M    + P  + F  ++R     
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +       G  P+ + Y  LI  + K  +    L+L+  M+   IS  +   
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +I  L +C ++E+A K+F  +    + P +  Y +++
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 125/305 (40%), Gaps = 43/305 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRND----LVWRIYQHMLENIRYPNEA 59
           F+ A  V R +   G    + +F T++ V     R +    L +R+++  LE    P+  
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE----PDAL 567

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
              TLI A CK  +    + + D +   + S  + V   +I  + +  RIE+       +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           +   M  D + Y+ ++     +R L+ A  ++E +    F  N+   T  I   C+   +
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687

Query: 180 EEA-------------------NCLM----------------QEMENAGLKPYDETFNLL 204
           + A                    CLM                +EM+  G+ P   +++++
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K  R++E+ +   Q +  KLLP   A+  +IR  C+ G   +A  +    L  G 
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807

Query: 265 SPNEI 269
            P+++
Sbjct: 808 KPDDL 812



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 7/164 (4%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+FE+       L+   F  + ++   LIHV+ K++  D   R++  M E    PN  T 
Sbjct: 657 RIFEL-------LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+    K   ++    + + +  K  SP ++  + +I  + +  R++E   +  + + 
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
             ++ D +AY++++    K+  L  A ++YE ML+ G   +  +
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 161/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 99  FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYKXILE-CGYPASLYFFN 142

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 143 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV---------------------------- 174

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   ML  G   + + Y+  I   C+  K+++A
Sbjct: 175 -------SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 227

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   ++M+S+ LLP    +N +I  
Sbjct: 228 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 287

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA+ ++     KG  P++ITY+ LI G  KEG++    +    M  ++I   
Sbjct: 288 LCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLD 347

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    +KG+  K   L +
Sbjct: 348 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLK 407

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 408 EMQRDGHVPS 417



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 148/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +   + + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 116 LKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 175

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 176 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 235

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y+ ML +    +   Y T I   C+ G ++
Sbjct: 236 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 295

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 296 QAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALI 355

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  PN  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 356 SGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 415

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 416 PSVVTYNVLMNG 427



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  FV++  I AY 
Sbjct: 20  TMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILETKGTQRSDIFVFSGLITAYL 79

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E   + +A  C     E+    P+D T   ++E   K K  +    + + ++      S 
Sbjct: 80  ESEFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYKXILECGYPASL 138

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 139 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 198

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 199 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 258

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + + M+S+ L P 
Sbjct: 259 VDLAMEIYKRMLSQSLLPD 277


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 177/369 (47%), Gaps = 16/369 (4%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           V  DVC Y+  R    S   F + + +VTK             +  NIR  +++ +  L+
Sbjct: 428 VNMDVCSYVIHRLMERS--GFVSALKIVTKL------------LSGNIRV-SDSLLTPLV 472

Query: 66  SALCKGGQLQTYVDMLDRIHG-KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
             LCK       +++  ++   K  +   + + +L+  + +   +EE   +LK+ML K +
Sbjct: 473 VGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGL 532

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D I+Y+ +++   K   +E A  + EEM+++ F  +++ Y   +    + GKI++ + 
Sbjct: 533 LLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHR 592

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ E +  G  P   T+ LL+EG  KA RIE+++ + + +   K+  S   +N +I   C
Sbjct: 593 LLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYC 652

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             GN  +A  +      +G  P   TYS LI G    G + E  +++ EM  + + P + 
Sbjct: 653 RIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVF 712

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT+LI   C+ G+++        M S+ + P    Y  ++  + + GN  +A  L  EM
Sbjct: 713 CYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEM 772

Query: 365 VSEGLKPST 373
           +  G+ P T
Sbjct: 773 IRNGIAPDT 781



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 179/374 (47%), Gaps = 3/374 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           + +FE A +V   +   GF+ + + FN LI    +        R+   M      PN  T
Sbjct: 338 LEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVT 397

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL+   C+  Q++    +L  I     S  + V + +I R+++       + ++ ++L
Sbjct: 398 FNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLL 457

Query: 121 RKNM-IHDTIAYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGK 178
             N+ + D++   L+V    K      A+ ++ ++   +G +AN+      +   CE G 
Sbjct: 458 SGNIRVSDSLLTPLVV-GLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGN 516

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +EE   ++++M   GL     ++N LI GC K  +IEE+    E+M+ ++  P    +N 
Sbjct: 517 MEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNF 576

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +++ L + G     + +L  A + GF PN  TY+ L+ GY K   I++ +K +  ++Y+ 
Sbjct: 577 LMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEK 636

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +  +   Y  LI++ C+ G + EA K    MKS  ++P    Y SL+      G   +A 
Sbjct: 637 VELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAK 696

Query: 359 HLCEEMVSEGLKPS 372
            + EEM +EGL P+
Sbjct: 697 EIFEEMRNEGLLPN 710



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 173/402 (43%), Gaps = 37/402 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+     +RG    L + N L+  + K++     + ++    + +  P+  T  T I+
Sbjct: 205 AFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQGVA-PDVFTFTTAIN 263

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CKGG++   VD+  ++ G    P V+   ++I  + +  R EE +    RM+R  +  
Sbjct: 264 AFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNP 323

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y +++   +K+   E A  V  EM   GF+ N  V+   I  YC  G + EA  + 
Sbjct: 324 SVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVR 383

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEE------------------------------ 216
            EM   G+KP   TFN L++G  ++ ++E+                              
Sbjct: 384 DEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMER 443

Query: 217 -----SLSYCEQMMSRKLLPSCSAFNEMIRRLCEC-GNAKQANGMLTLALDKGFSPNEIT 270
                +L    +++S  +  S S    ++  LC+C G+++       LA  KG + N +T
Sbjct: 444 SGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVT 503

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            + L+ G  + G ++EV ++  +M  K +     +Y +LI   C+ GK+EEA K  + M 
Sbjct: 504 SNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMV 563

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                P    Y  L+    + G       L  E    G  P+
Sbjct: 564 QQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPN 605



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 135/245 (55%), Gaps = 1/245 (0%)

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           +L++ + VK   L  +  V++ +  +G + + F +TT I A+C+ G++ +A  L  +ME 
Sbjct: 225 NLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEG 283

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+N +I+G  K+ R EE+L + ++M+  K+ PS   +  +I  L +    ++
Sbjct: 284 LGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEE 343

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           AN +L      GF+PNE+ ++ LI GY ++G++ E L++  EM  K + P    + +L+ 
Sbjct: 344 ANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQ 403

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+  ++E+A++    + S  L   +D+   ++   +E+     AL +  +++S  ++ 
Sbjct: 404 GFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRV 463

Query: 372 STSYL 376
           S S L
Sbjct: 464 SDSLL 468



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 135/299 (45%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G + + ++ N L+H + +    + V+ + + MLE     +  +  TLI   CK G+++ 
Sbjct: 495 KGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEE 554

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + + +  +   P       L+  +    +I++   LL        + +   Y+L++ 
Sbjct: 555 AFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLE 614

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +E A+  ++ +       +S VY   I AYC  G + EA  L   M++ G+ P
Sbjct: 615 GYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILP 674

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T++ LI G     R++E+    E+M +  LLP+   +  +I   C+ G       +L
Sbjct: 675 TCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSIL 734

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 G  PN+ITY+ +I GY K G ++E  +L  EM    I+P    Y +L    C+
Sbjct: 735 LEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCK 793



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 135/285 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E  F+V + + ++G  L  IS+NTLI    K  + +  +++ + M++    P+  T   L
Sbjct: 518 EEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFL 577

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  L   G++     +L         P V     L+    + +RIE+ +   K +  + +
Sbjct: 578 MKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKV 637

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              ++ Y++++ A  ++ N+  A  + + M  RG       Y++ I   C  G+++EA  
Sbjct: 638 ELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKE 697

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + +EM N GL P    +  LI G  K  +++   S   +M S  + P+   +  MI   C
Sbjct: 698 IFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYC 757

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           + GN K+A  +L   +  G +P+ +TY+ L  GY KE E+   L+
Sbjct: 758 KLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ 802


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 139/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ +L     +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++   + KG  P++ TY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G KPS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPS 415



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCR-----------------YLEQR---GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR                 + E+    G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++  VL   ML K ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYKPSV 416



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   + E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LDKG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    +  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++     + D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM+ +G   + F YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L  K    ++ +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEENLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A+  F  M    LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 139/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ +L     +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++   + KG  P++ TY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G KPS
Sbjct: 382 GTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPS 415



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCR-----------------YLEQR---GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR                 + E+    G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++  VL   ML K ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWXGSKLLKEMQRDGYKPSV 416



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   + E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LDKG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    +  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++     + D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM+ +G   + F YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEENLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A+  F  M    LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 35/321 (10%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  T++  +C  G L    +++  +    C P V++ T+LI   +Q  R  + M +LK M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------ 173
             + +  D   Y+ ++    K + ++ A     EM++ G   N+F Y  FI  Y      
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 174 -----------------------------CEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                                        C+ GK+ EA    + M + G+    +T+ +L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G  K  +++++     +M  + + P   ++  +I    + GN ++A+ +    +++G 
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN I Y+ L+GG+ + GEI++  +L  EM  K + P    Y ++I   C+ G L EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 325 YFKIMKSHSLVPGVDIYESLV 345
            F  MK   LVP   +Y +LV
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLV 739



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 197/459 (42%), Gaps = 84/459 (18%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V + ++++G +  +  +N+LI  ++K+ R D        M+EN   PN  T   
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 64  LISAL-----------------------------------CKGGQL----QTYVDMLDR- 83
            IS                                     CK G++      Y  M+D+ 
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           I G   +  V++N      + + +++++   + + M  K +  D  +Y +++    K+ N
Sbjct: 588 ILGDAKTYTVLMNG-----LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A  +++EM++ G + N  +Y   +G +C  G+IE+A  L+ EM   GL P   T+  
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLP-------------------------------- 231
           +I+G  K+  + E+    ++M  + L+P                                
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762

Query: 232 --SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS----PNEITYSHLIGGYAKEGEIQ 285
             S + FN +I  + + G  +    +L   +D  F     PN++TY+ +I    KEG ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              +L+++M+  ++ PT+  YTSL++   + G+  E    F    +  + P   +Y  ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
              L++G   KAL L ++M ++        L S STCR 
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKL-SISTCRA 920



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 164/360 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G SL   +++ LI  + K    D    +   M+ +            I  + K G 
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    + D +      P      SLI    +E+ + +G  LL  M ++N++     Y  
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V       +L+ A  + +EM+  G   N  +YTT I  + +  +  +A  +++EM+  G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P    +N LI G +KAKR++E+ S+  +M+   L P+   +   I    E      A+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +    + G  PN++  + LI  Y K+G++ E    Y  M  + I      YT L++ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  K+++A++ F+ M+   + P V  Y  L+    + GN  KA  + +EMV EGL P+ 
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 180/411 (43%), Gaps = 35/411 (8%)

Query: 3   LFEVAFD---VCRYLEQRGFSLS----------LISFNTLIHVVTKSDRNDLVWRIYQHM 49
           LF + FD      Y+E+  F  S          L     L+  + + +R DL W +Y+ M
Sbjct: 153 LFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212

Query: 50  LENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR------- 102
           +E     +  T   LI A C+ G +Q   D+L +   +  +  + V+ +L L+       
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272

Query: 103 --------------IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
                         + + +R+E+   LL  M    +  D   YSL++   +K RN ++A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            +  EM+  G +   ++Y   I    + G +E+A  L   M  +GL P  + +  LIEG 
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            + K + +      +M  R ++ S   +  +++ +C  G+   A  ++   +  G  PN 
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           + Y+ LI  + +     + +++  EM+ + I+P +  Y SLI  L +  +++EA  +   
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           M  + L P    Y + +  ++E    A A    +EM   G+ P+   LC+ 
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN-KVLCTG 562



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 150/352 (42%), Gaps = 35/352 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++R   +S  ++ T++  +  S   D  + I + M+ +   PN     TLI    +  +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +L  +  +  +P +    SLI+ + + +R++E    L  M+   +  +   Y  
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI-------------- 179
            +   ++     SA    +EM + G   N  + T  I  YC+ GK+              
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 180 ---------------------EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
                                ++A  + +EM   G+ P   ++ +LI G +K   ++++ 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S  ++M+   L P+   +N ++   C  G  ++A  +L     KG  PN +TY  +I GY
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            K G++ E  +L+ EM+ K + P    YT+L+   C+   +E A   F   K
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/352 (20%), Positives = 141/352 (40%), Gaps = 45/352 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R +  +G +  + S+  LI+  +K         I+  M+E    PN      L+ 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+++   ++LD +  K   P  +   ++I    +   + E   L   M  K ++ 
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D+  Y+ +V    ++ ++E A+ ++    K+G ++++  +   I    ++GK E    ++
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVL 789

Query: 187 QEMENAGL----KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             + +       KP D T+N++I+   K   +E +     QM +  L+P+   +  ++  
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849

Query: 243 LCECG----------------------------NAKQANGMLTLAL---DKGFSPNEI-- 269
             + G                            NA    GM T AL   D+ F+ N +  
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909

Query: 270 -------TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                  T   L+ G+AK GE++   K+   M      P       LI+  C
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 34/239 (14%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDL----VWRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++G + S   FN LI+ V K  + +L    + R+     +    PN+ T   +I  LCK 
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L+   ++  ++      P VI  TSL+    +  R  E   +    +   +  D I Y
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+I+ A +K      ALV+ ++M    F+ N+                           +
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQM----FAKNAV--------------------------D 908

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            G K    T   L+ G AK   +E +    E M+  + +P  +   E+I   C   N +
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 160/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 103 FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEEILE-CGYPASLYFFN 146

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 147 ILMHRFCKDGDIRJAQSVFDAITKWGLRPSVV---------------------------- 178

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   ML  G   + + Y+  I   C+  K+++A
Sbjct: 179 -------SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA+ ++     KG  P++ITY+ LI G  KEG++    +    M  ++I   
Sbjct: 292 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 351

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    +KG+  K   L +
Sbjct: 352 EVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLK 411

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 412 EMQRDGHVPS 421



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 3/277 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RJ +  FD    + + G   S++S+NTL++   +    D  +R+   ML +   P+  T
Sbjct: 158 IRJAQSVFDA---ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYT 214

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 215 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G ++
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  +  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 335 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              C+ G+  +   +L      G  P+ +TY+ L+ G
Sbjct: 395 NEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 2/213 (0%)

Query: 161 ANSFVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           ++ +V++  I AY E G + +A  C     E+    P+D T   ++E   K K  +    
Sbjct: 70  SDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWG 128

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + E+++      S   FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           + G++ E  +L   M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP   
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + +L+  H + G    A+ + ++M+S+ L P 
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 281


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 172/391 (43%), Gaps = 37/391 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +  ++S+ T+I+   K   +D  +  Y  ML+    P+  T  ++I+ALCKG  +   
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-SLIVY 136
           +++L  +      P  +   S++      E+ +E +  LK+M    +  D + Y SL+ Y
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                R+ E A  +++ M KRG   +   Y T +  Y   G + E + L+  M   G+ P
Sbjct: 311 LCKNGRSTE-ARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP 369

Query: 197 YDETFNLLIEGCAKAKRIEESLS-----------------------------------YC 221
               FN+LI   AK ++++E++                                    Y 
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           EQM+   L P+   +  +I  LC      +A  ++   LD+G   N I ++ +I  + KE
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E  KL+  M    + P +  Y++LI   C  GK++EA K    M S  + P    Y
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +L+  +        AL L +EMVS G+ P+
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPN 580



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 183/383 (47%), Gaps = 12/383 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
            ++ F     + ++GF +  I+F  L+  +    R +D +  + + M E    P+  +  
Sbjct: 103 LDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCT 162

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKR---CSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
            L+  LC   + Q  +++L  +   R    +P V+  T++I    +E   ++       M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           L + +  D + YS I+ A  K + ++ A+ V   M+K G   N   Y + +  YC   + 
Sbjct: 223 LDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP 282

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA   +++M + G++P   T+N L++   K  R  E+    + M  R L P  + +  +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           ++     G   + + +L L +  G  P+   ++ LI  YAK+ ++ E + ++ +M    +
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGNKA 355
           +P +  Y ++I  LC+ G +++A  YF+ M    L P + +Y SL  IH     +K +KA
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL--IHSLCIFDKWDKA 460

Query: 356 KALHLCEEMVSEGLKPSTSYLCS 378
           + L L  EM+  G+  +T +  S
Sbjct: 461 EELIL--EMLDRGICLNTIFFNS 481



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 165/352 (46%), Gaps = 4/352 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM-LDR 83
           ++  LI    ++ R DL +    ++++        T   L+  LC   +    +D+ L R
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---NMIHDTIAYSLIVYAKVK 140
           +    C P V   T L+  +  E R +E + LL  M          D ++Y+ ++    K
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFK 208

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
             + + A   Y EML R  S +   Y++ I A C+   +++A  ++  M   G+ P   T
Sbjct: 209 EGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMT 268

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N ++ G   +++ +E++ + ++M S  + P    +N ++  LC+ G + +A  +     
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G  P+  TY  L+ GYA +G + E+  L   M    I P    +  LI +  +  K++
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA   F  M+ H L P V  Y +++GI  + G+   A+   E+M+ EGL P+
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 162/356 (45%), Gaps = 2/356 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   + + G   + +++N+++H    S++        + M  +   P+  T  +L+ 
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+      + D +  +   P +    +L+     +  + E   LL  M+R  +  
Sbjct: 310 YLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP 369

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +++++ A  K   ++ A++V+ +M + G + N   Y   IG  C+ G +++A    
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + GL P    +  LI       + +++     +M+ R +  +   FN +I   C+ 
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   ++  +  L +  G  PN ITYS LI GY   G++ E  KL   M    + P    Y
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKAKALHL 360
            +LI+  C+  ++++A   FK M S  + P +  Y  ++    H  +   AK L++
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV 605



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 158/327 (48%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI    K ++ D    ++  M ++   PN  T   +I  LCK G +   +   +++ 
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI 433

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  +P +IV TSLI  +   ++ ++   L+  ML + +  +TI ++ I+++  K   + 
Sbjct: 434 DEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVI 493

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            +  +++ M++ G   N   Y+T I  YC  GK++EA  L+  M + G+KP   T+N LI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  +  R++++L+  ++M+S  + P+   +N +++ L        A  +       G  
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  K     E L+++  +    +      +  +I +L + G+ +EA   
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKG 352
           F  + ++ LVP V  Y  +    +E+G
Sbjct: 674 FAALSANGLVPDVRTYSLMAENLIEQG 700



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 152/326 (46%), Gaps = 1/326 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A    + +   G    ++++N+L+  + K+ R+    +I+  M +    P+ AT  TL+ 
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQ 344

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   V   LI    ++E+++E M++  +M +  +  
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y  ++    K  +++ A++ +E+M+  G + N  VYT+ I + C + K ++A  L+
Sbjct: 405 NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+      FN +I    K  R+ ES    + M+   + P+   ++ +I   C  
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L+     G  P+ +TY+ LI GY +   + + L L+ EM    +SP +  Y
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584

Query: 307 TSLISSLCQCGKLEEADK-YFKIMKS 331
             ++  L    +   A + Y  I KS
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKS 610



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 9/327 (2%)

Query: 9   DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D   Y EQ    G + ++I + +LIH +   D+ D    +   ML+     N     ++I
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483

Query: 66  SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            + CK G++   +   D++ RI  K   P VI  ++LI       +++E   LL  M   
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVK---PNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            M  D + Y+ ++    ++  ++ AL +++EM+  G S N   Y   +       +   A
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 600

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   +  +G +    T+N+++ G  K    +E+L   + +    L      FN MI  
Sbjct: 601 KELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 660

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L + G   +A  +       G  P+  TYS +     ++G ++E+  L+  ME    +  
Sbjct: 661 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 720

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM 329
                S++  L Q G +  A  Y  ++
Sbjct: 721 SRMLNSIVRKLLQRGDITRAGTYLSMI 747



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 123/282 (43%), Gaps = 50/282 (17%)

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG---LKPYDETF 201
           E A  V+EE+L+RG  A+ +     +     +     A      M  AG   + P   T+
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 202 NLLIEGCAKAKRIE----------------ESLSYC--------------------EQMM 225
            +LI  C +A R++                E++++                      +M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK---GFSPNEITYSHLIGGYAKEG 282
               +P   +   +++ LC+   +++A  +L +  D    G +P+ ++Y+ +I G+ KEG
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +  +    Y+EM  + ISP +  Y+S+I++LC+   +++A +    M  + ++P    Y 
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST-------SYLC 377
           S++  +       +A+   ++M S+G++P          YLC
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLC 312



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 6/163 (3%)

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           K+ P+   +  +I   C  G        L   + KGF    IT++ L+ G   +    + 
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 288 LKLYY-EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM---KSHSLVPGVDIYES 343
           + +    M   S  P + + T L+  LC   + +EA +   +M   +     P V  Y +
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTT 201

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS--ASTCRG 384
           ++    ++G+  KA     EM+   + P      S  A+ C+G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 35/321 (10%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  T++  +C  G L    +++  +    C P V++ T+LI   +Q  R  + M +LK M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------ 173
             + +  D   Y+ ++    K + ++ A     EM++ G   N+F Y  FI  Y      
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 174 -----------------------------CEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                                        C+ GK+ EA    + M + G+    +T+ +L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G  K  +++++     +M  + + P   ++  +I    + GN ++A+ +    +++G 
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN I Y+ L+GG+ + GEI++  +L  EM  K + P    Y ++I   C+ G L EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 325 YFKIMKSHSLVPGVDIYESLV 345
            F  MK   LVP   +Y +LV
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLV 739



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 197/459 (42%), Gaps = 84/459 (18%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V + ++++G +  +  +N+LI  ++K+ R D        M+EN   PN  T   
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 64  LISAL-----------------------------------CKGGQL----QTYVDMLDR- 83
            IS                                     CK G++      Y  M+D+ 
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           I G   +  V++N      + + +++++   + + M  K +  D  +Y +++    K+ N
Sbjct: 588 ILGDAKTYTVLMNG-----LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A  +++EM++ G + N  +Y   +G +C  G+IE+A  L+ EM   GL P   T+  
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLP-------------------------------- 231
           +I+G  K+  + E+    ++M  + L+P                                
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762

Query: 232 --SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS----PNEITYSHLIGGYAKEGEIQ 285
             S + FN +I  + + G  +    +L   +D  F     PN++TY+ +I    KEG ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              +L+++M+  ++ PT+  YTSL++   + G+  E    F    +  + P   +Y  ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
              L++G   KAL L ++M ++        L S STCR 
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKL-SISTCRA 920



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 164/360 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G SL   +++ LI  + K    D    +   M+ +            I  + K G 
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    + D +      P      SLI    +E+ + +G  LL  M ++N++     Y  
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V       +L+ A  + +EM+  G   N  +YTT I  + +  +  +A  +++EM+  G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P    +N LI G +KAKR++E+ S+  +M+   L P+   +   I    E      A+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +    + G  PN++  + LI  Y K+G++ E    Y  M  + I      YT L++ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  K+++A++ F+ M+   + P V  Y  L+    + GN  KA  + +EMV EGL P+ 
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 168/373 (45%), Gaps = 22/373 (5%)

Query: 28  TLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
            L+  + + +R DL W +Y+ M+E     +  T   LI A C+ G +Q   D+L +   +
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250

Query: 88  RCSPMVIVNTSLILR---------------------IIQEERIEEGMVLLKRMLRKNMIH 126
             +  + V+ +L L+                     + + +R+E+   LL  M    +  
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   YSL++   +K RN ++A  +  EM+  G +   ++Y   I    + G +E+A  L 
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M  +GL P  + +  LIEG  + K + +      +M  R ++ S   +  +++ +C  
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+   A  ++   +  G  PN + Y+ LI  + +     + +++  EM+ + I+P +  Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  L +  +++EA  +   M  + L P    Y + +  ++E    A A    +EM  
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 367 EGLKPSTSYLCSA 379
            G+ P+   LC+ 
Sbjct: 551 CGVLPN-KVLCTG 562



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 150/352 (42%), Gaps = 35/352 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++R   +S  ++ T++  +  S   D  + I + M+ +   PN     TLI    +  +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +L  +  +  +P +    SLI+ + + +R++E    L  M+   +  +   Y  
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI-------------- 179
            +   ++     SA    +EM + G   N  + T  I  YC+ GK+              
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 180 ---------------------EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
                                ++A  + +EM   G+ P   ++ +LI G +K   ++++ 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S  ++M+   L P+   +N ++   C  G  ++A  +L     KG  PN +TY  +I GY
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            K G++ E  +L+ EM+ K + P    YT+L+   C+   +E A   F   K
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/352 (20%), Positives = 141/352 (40%), Gaps = 45/352 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R +  +G +  + S+  LI+  +K         I+  M+E    PN      L+ 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+++   ++LD +  K   P  +   ++I    +   + E   L   M  K ++ 
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D+  Y+ +V    ++ ++E A+ ++    K+G ++++  +   I    ++GK E    ++
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVL 789

Query: 187 QEMENAGL----KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             + +       KP D T+N++I+   K   +E +     QM +  L+P+   +  ++  
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849

Query: 243 LCECG----------------------------NAKQANGMLTLAL---DKGFSPNEI-- 269
             + G                            NA    GM T AL   D+ F+ N +  
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909

Query: 270 -------TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                  T   L+ G+AK GE++   K+   M      P       LI+  C
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 34/239 (14%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDL----VWRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++G + S   FN LI+ V K  + +L    + R+     +    PN+ T   +I  LCK 
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L+   ++  ++      P VI  TSL+    +  R  E   +    +   +  D I Y
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+I+ A +K      ALV+ ++M    F+ N+                           +
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQM----FAKNAV--------------------------D 908

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            G K    T   L+ G AK   +E +    E M+  + +P  +   E+I   C   N +
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 150/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 125 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 178

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 179 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 208

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K++ AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 268

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ TY+ LI G  
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 328

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 388

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  +V    +KG+  K   L +EM  +G  PS
Sbjct: 389 TYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPS 421



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 148/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E +++    L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y T I   C+ G ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ ++  + K+G++ +  KL  EM+    +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHA 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      ANG+   
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 298 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
            MIH    + L+  AK      V  +   SA  V+  +L  K    ++ +V++  I AY 
Sbjct: 24  TMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKLWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K++ A+  F  M    LVP    + +L+  H + G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 263 VDLAMEIYKQMLSQSLLPD 281


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 35/321 (10%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  T++  +C  G L    +++  +    C P V++ T+LI   +Q  R  + M +LK M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             + +  D   Y+ ++    K + ++ A     EM++ G   N+F Y  FI  Y E  + 
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 180 EEANCLMQEMENAGLKPYD-----------------------------------ETFNLL 204
             A+  ++EM   G+ P                                     +T+ +L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G  K  +++++     +M  + + P   ++  +I    + GN ++A+ +    +++G 
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN I Y+ L+GG+ + GEI++  +L  EM  K + P    Y ++I   C+ G L EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 325 YFKIMKSHSLVPGVDIYESLV 345
            F  MK   LVP   +Y +LV
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLV 739



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 195/459 (42%), Gaps = 84/459 (18%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V + ++++G +  +  +N+LI  ++K+ R D        M+EN   PN  T   
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 64  LISA---------------------------LCKG------------GQLQTYVDMLDR- 83
            IS                            LC G                 Y  M+D+ 
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQG 587

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           I G   +  V++N      + + +++++   + + M  K +  D  +Y +++    K+ N
Sbjct: 588 ILGDAKTYTVLMNG-----LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A  +++EM++ G + N  +Y   +G +C  G+IE+A  L+ EM   GL P   T+  
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLP-------------------------------- 231
           +I+G  K+  + E+    ++M  + L+P                                
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762

Query: 232 --SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS----PNEITYSHLIGGYAKEGEIQ 285
             S + FN +I  + + G  +    +L   +D  F     PN++TY+ +I    KEG ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              +L+++M+  ++ PT+  YTSL++   + G+  E    F    +  + P   +Y  ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
              L++G   KAL L ++M ++        L S STCR 
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKL-SISTCRA 920



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 163/360 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G SL   +++ LI  + K    D    +   M+ +            I  + K G 
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    + D +      P      SLI    +E+ + +G  LL  M ++N++     Y  
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V       +L+ A  + +EM+  G   N  +YTT I  + +  +  +A  +++EM+  G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P    +N LI G +KAKR++E+ S+  +M+   L P+   +   I    E      A+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +    + G  PN++  + LI  Y K+ ++ E    Y  M  + I      YT L++ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  K+++A++ F+ M+   + P V  Y  L+    + GN  KA  + +EMV EGL P+ 
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 168/373 (45%), Gaps = 22/373 (5%)

Query: 28  TLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
            L+  + + +R DL W +Y+ M+E     +  T   LI A C+ G +Q   D+L +   +
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250

Query: 88  RCSPMVIVNTSLILR---------------------IIQEERIEEGMVLLKRMLRKNMIH 126
             +  + V+ +L L+                     + + +R+E+   LL  M    +  
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   YSL++   +K RN ++A  +  EM+  G +   ++Y   I    + G +E+A  L 
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M  +GL P  + +  LIEG  + K + +      +M  R ++ S   +  +++ +C  
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+   A  ++   +  G  PN + Y+ LI  + +     + +++  EM+ + I+P +  Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  L +  +++EA  +   M  + L P    Y + +  ++E    A A    +EM  
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550

Query: 367 EGLKPSTSYLCSA 379
            G+ P+   LC+ 
Sbjct: 551 CGVLPN-KVLCTG 562



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/352 (20%), Positives = 148/352 (42%), Gaps = 35/352 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++R   +S  ++ T++  +  S   D  + I + M+ +   PN     TLI    +  +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +L  +  +  +P +    SLI+ + + +R++E    L  M+   +  +   Y  
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 134 IVYAKVKMRNLESA-----------------------------------LVVYEEMLKRG 158
            +   ++     SA                                      Y  M+ +G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQG 587

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              ++  YT  +    +  K+++A  + +EM   G+ P   ++ +LI G +K   ++++ 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S  ++M+   L P+   +N ++   C  G  ++A  +L     KG  PN +TY  +I GY
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
            K G++ E  +L+ EM+ K + P    YT+L+   C+   +E A   F   K
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/352 (20%), Positives = 141/352 (40%), Gaps = 45/352 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R +  +G +  + S+  LI+  +K         I+  M+E    PN      L+ 
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+++   ++LD +  K   P  +   ++I    +   + E   L   M  K ++ 
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D+  Y+ +V    ++ ++E A+ ++    K+G ++++  +   I    ++GK E    ++
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVL 789

Query: 187 QEMENAGL----KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             + +       KP D T+N++I+   K   +E +     QM +  L+P+   +  ++  
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849

Query: 243 LCECG----------------------------NAKQANGMLTLAL---DKGFSPNEI-- 269
             + G                            NA    GM T AL   D+ F+ N +  
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909

Query: 270 -------TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                  T   L+ G+AK GE++   K+   M      P       LI+  C
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 150/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 106 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 159

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 160 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 189

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K++ AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 190 QPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 249

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ TY+ LI G  
Sbjct: 250 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 309

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 310 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 369

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  +V    +KG+  K   L +EM  +G  PS
Sbjct: 370 TYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPS 402



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 148/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 101 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 160

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E +++    L   ML
Sbjct: 161 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEML 220

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y T I   C+ G ++
Sbjct: 221 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 280

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 281 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 340

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ ++  + K+G++ +  KL  EM+    +
Sbjct: 341 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHA 400

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 401 PSVVTYNVLMNG 412



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 99  MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 158

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      ANG+   
Sbjct: 159 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDE 218

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 219 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 278

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 279 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 330



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    +  +  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 5   TMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLITAYL 64

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 65  ESGFLRDAIECYRLTREHKLWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 123

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 124 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 183

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K++ A+  F  M    LVP    + +L+  H + G 
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 244 VDLAMEIYKQMLSQSLLPD 262


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 161/358 (44%), Gaps = 16/358 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE AF + + + ++GF     ++  +I  + ++ R D  + ++Q M +    P+  T   
Sbjct: 433 FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTI 492

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G ++      D +    CSP V+  T+L+   ++ +++ +   +  RM+   
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG----------------FSANSFVYT 167
              + I YS ++    K   ++ A  VY +++                    S N   Y 
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYG 612

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             +   C+  K+ +A+ L+  M  AG +P    ++ L++G  K   I+ +     +M   
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC 672

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             LPS   +  +I R+ + G    A  +L+  L    +PN +TY+ ++ G  K GE ++ 
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKA 732

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           L L   ME K  SP +  YT+LI  L + GK++   + F  MK+    P    Y  L+
Sbjct: 733 LNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 152/350 (43%), Gaps = 16/350 (4%)

Query: 40  DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           DL  ++Y+ ML      N+         LC  G+ +    ++  +  K   P     T +
Sbjct: 399 DLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKV 458

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           I  + Q +R+++  +L + M +  +  D   Y++++ +  K   +E A   ++EM   G 
Sbjct: 459 ITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGC 518

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE---- 215
           S N   YT  + AY +  ++ +AN +   M      P   T++ LI+G  KA  I+    
Sbjct: 519 SPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACE 578

Query: 216 ------------ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
                       ES  Y E   +  + P+   +  ++  LC+      A+ +L   L  G
Sbjct: 579 VYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAG 638

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN+I Y  L+ G+ K GEI    +++  M      P++  YTSLI  + + G+L+ A 
Sbjct: 639 CEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K    M   S  P V  Y ++V    + G   KAL+L   M  +G  P+ 
Sbjct: 699 KVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNV 748



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 167/367 (45%), Gaps = 11/367 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+  G+  S +++N L+ V+  + + ++ +R+ + M  +    + +T+ +   ALCK G+
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGR 254

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               +D+L+R   K  +   ++ T +I  +++     E M  L RM   + I + + Y  
Sbjct: 255 WGDALDLLEREDFKLDT---VLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRT 311

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   +K + L     +   M+  G + +  ++ + +  YC       A  L   M   G
Sbjct: 312 LLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCG 371

Query: 194 LKPYDETFNLLIEGCAKAKRI--EESLSYCEQMMSRKLLPSCSAFNEM-----IRRLCEC 246
             P    +N+ I      + +   E L   E++    L+ SC   N++      R LC  
Sbjct: 372 CPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASC-VLNKINTANFARCLCGV 430

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  ++   + KGF P+  TY+ +I    +   + +   L+ EM+   ++P +  Y
Sbjct: 431 GKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTY 490

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI S C+ G +E+A  +F  M+S    P V  Y +L+  +L+     +A  +   MV 
Sbjct: 491 TILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVG 550

Query: 367 EGLKPST 373
           +   P+ 
Sbjct: 551 DACYPNA 557



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 150/363 (41%), Gaps = 40/363 (11%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   L++ LCK  ++    D+LD +    C P  IV  +L+    +   I+    +
Sbjct: 606 PNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEV 665

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             RM +   +     Y+ ++    K   L+ A+ V  +MLK   + N   YT  +   C+
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCK 725

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ E+A  L+  ME  G  P   T+  LI+G  KA +++  L    QM ++   P+   
Sbjct: 726 TGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVT 785

Query: 236 FNEMIRRLCECGN----------------AKQANGMLTLALDKGFS-------------- 265
           +  +I   C  G                  K   G  T    +GFS              
Sbjct: 786 YRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTV--QGFSKRFLASLGLLEEME 843

Query: 266 -----PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA---YTSLISSLCQCG 317
                P    Y  LI  ++K G ++  L+L+ EM   S S  + +   +TSLI +LC   
Sbjct: 844 SHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSS 903

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           ++EEA   +  M+   +VP +  +  LV   +E+    +AL LC  +  EG+    +  C
Sbjct: 904 QVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVNWEGNKFC 963

Query: 378 SAS 380
              
Sbjct: 964 DGG 966



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 22/386 (5%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D    LE+  F L  +    +I  + ++   +        M  N   PN  T RTL++  
Sbjct: 257 DALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGF 316

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
            K  QL     +++ +  + C+P   +  SL+      E       L  RM         
Sbjct: 317 LKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGY 376

Query: 129 IAYSLIVYA---KVKMRN---LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           + Y++ + +   + ++ N   L+ A  VYEEML      N      F    C  GK E+A
Sbjct: 377 VVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKA 436

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +++EM   G  P   T+  +I    +AKR++++    ++M    + P    +  +I  
Sbjct: 437 FQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDS 496

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ G  +QA          G SPN +TY+ L+  Y K  ++ +   +++ M   +  P 
Sbjct: 497 FCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPN 556

Query: 303 LPAYTSLISSLCQCGKLE----------------EADKYFKIMKSHSLVPGVDIYESLVG 346
              Y++LI  LC+ G+++                E+D YF+   + ++ P V  Y +LV 
Sbjct: 557 AITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVN 616

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              +    + A  L + M++ G +P+
Sbjct: 617 GLCKAQKVSDAHDLLDAMLAAGCEPN 642



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 154/373 (41%), Gaps = 28/373 (7%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   G S +++++  L+H   KS +      I+  M+ +  YPN  T   LI  LCK G+
Sbjct: 513 MRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGE 572

Query: 74  LQTYVDMLDRIHG----------------KRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
           +Q   ++  ++ G                   SP V+   +L+  + + +++ +   LL 
Sbjct: 573 IQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLD 632

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            ML      + I Y  +V    K+  ++SA  V+  M K G+  +   YT+ I    + G
Sbjct: 633 AMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDG 692

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +++ A  ++ +M      P   T+  +++G  K    E++L+    M  +   P+   + 
Sbjct: 693 RLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYT 752

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I  L + G       +      KG +PN +TY  LI      G + +   L  EM+  
Sbjct: 753 ALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQT 812

Query: 298 SISPTLPAYTSLISS-----LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
                L  Y + +       L   G LEE       M+SH   P   +Y  L+    + G
Sbjct: 813 HWPKYLQGYRTTVQGFSKRFLASLGLLEE-------MESHDTAPIAPVYGMLIDSFSKAG 865

Query: 353 NKAKALHLCEEMV 365
               AL L +EM+
Sbjct: 866 RLETALELHKEMM 878



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 3/174 (1%)

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N+L+  C       E+L    ++      PS   +N +++ L   G  + A  +     
Sbjct: 172 LNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMS 231

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             GF  +  T         KEG   + L L    ++K +   L   T +IS L +     
Sbjct: 232 ASGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDFK-LDTVL--CTQMISGLMEASLFN 288

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           EA  +   M+ +S +P V  Y +L+   L+K        +   M++EG  PS S
Sbjct: 289 EAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPS 342


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 158/347 (45%), Gaps = 5/347 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N L+  + + +    V  +Y +M +    PN  T   LI ALC+  ++     MLD + 
Sbjct: 72  YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 131

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            K C P  + + +++  + +  R+EE      R      +    +Y+ +V+A      + 
Sbjct: 132 RKGCHPDEVSHGTIVSGMCKLGRVEEA-----RGFLAETVPVQASYNAVVHALCGEFRMW 186

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
               V  EM++RG   N   YTT + A+C+  ++  A  ++  M + G  P   TF  L+
Sbjct: 187 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 246

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G  +  ++ ++LS    M+     PS  ++N +IR LC  G+ K A             
Sbjct: 247 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 306

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN  TYS L+ G++  G++   + ++ EM+     P +  YT++I  LC+    ++A+  
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 366

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M   +  P    + +L+G   + G   +AL++   M   G  P+
Sbjct: 367 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 413



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 166/357 (46%), Gaps = 4/357 (1%)

Query: 12  RYLEQRGFSLSLI----SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           R  E RGF    +    S+N ++H +    R   V+ +   M++    PN  T  T++ A
Sbjct: 154 RVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 213

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK  +L+    +L R+    C+P V+  T+L+    ++ ++ + + +   M+ +     
Sbjct: 214 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 273

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           TI+Y++++     + +L+ AL  +  M +     N+  Y+T +  +   G ++ A  +  
Sbjct: 274 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 333

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM+++G KP    +  +I+   K    +++ S  ++M+     P+   FN +I RLC+CG
Sbjct: 334 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCG 393

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +A  +       G  PN+ TY+ L+ G  +EG  ++   +  EM       +L  Y 
Sbjct: 394 RVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYN 453

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           ++I+ LCQ    + A      M    + P    + +++  + ++G  + A  L  +M
Sbjct: 454 TVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 510



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 13/324 (4%)

Query: 54  RYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           R P       L+ AL +   +   V + D +      P V     LI  + Q +R++   
Sbjct: 65  RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 124

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV----YTTF 169
            +L  M RK    D +++  IV    K+  +E A         RGF A +      Y   
Sbjct: 125 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA---------RGFLAETVPVQASYNAV 175

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           + A C   ++ E   ++ EM   GL+P   T+  +++   KA+ +  + +   +M+S   
Sbjct: 176 VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGC 235

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P+   F  +++   E G    A  M    +D+G++P+ I+Y+ LI G    G+++  L 
Sbjct: 236 TPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALD 295

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
            +  M+  ++ P    Y++L+      G L+ A   +  MKS    P V +Y +++ +  
Sbjct: 296 FFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLC 355

Query: 350 EKGNKAKALHLCEEMVSEGLKPST 373
           +K    +A  L ++M+ +   P+T
Sbjct: 356 KKMMFDQAESLIDKMLMDNCPPNT 379



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/395 (19%), Positives = 161/395 (40%), Gaps = 40/395 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G   ++ ++N LI  + ++DR D   ++   M     +P+E +  T++S +CK G+
Sbjct: 95  MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGR 154

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++     L         P+     +++  +  E R+ E   ++  M+++ +  + + Y+ 
Sbjct: 155 VEEARGFL-----AETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 209

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           IV A  K R L  A  +   M+  G + N   +T  +  + E GK+ +A  +   M + G
Sbjct: 210 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 269

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN---------------- 237
             P   ++N+LI G      ++ +L +   M    LLP+ + ++                
Sbjct: 270 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 329

Query: 238 -------------------EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                               MI  LC+     QA  ++   L     PN +T++ LIG  
Sbjct: 330 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 389

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
              G +   L +++ M      P    Y  L+  L + G  ++A      M ++     +
Sbjct: 390 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 449

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             Y +++    +   +  A+ L   M+ +G++P  
Sbjct: 450 VTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 484


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 169/371 (45%), Gaps = 1/371 (0%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            FE A  +  ++E  G  L+ +++ TL++ + K ++ +L  R+ + M  N           
Sbjct: 1140 FEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 1199

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            LI  LCK G L   V ++  ++    +P VI  +SLI    +   I+    ++ RM R  
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            ++ + I YS ++Y   +  N+  A+ VY  M   G  A+ F     + + C  GK+ EA 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
              +  M   GL P   T++ +I G         + S+ + M+     PS   +  +++ L
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            C+ GN  +A   L        + + + Y+ L+    K G + E + L+ +M   ++ P  
Sbjct: 1380 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439

Query: 304  PAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y+SL++ LC+ GK   A   F   M   +L P   +Y  LV    + G+   A +  E
Sbjct: 1440 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 1499

Query: 363  EMVSEGLKPST 373
            EM+ +G  P T
Sbjct: 1500 EMMKKGTCPDT 1510



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 174/404 (43%), Gaps = 37/404 (9%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E+ + + R +  +G   ++ +FN LI+ +           + + M EN   P   T  TL
Sbjct: 966  ELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 1025

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            ++  CK G+ +  ++++D +  K     V      I  +    R  +  +LLK+M RK M
Sbjct: 1026 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM-RKEM 1084

Query: 125  IH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            I  + + Y+ ++   VK   +  A  V+ EM K   S N   Y   IG +C  G  EEA 
Sbjct: 1085 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL 1144

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             L+  ME AGL+  + T+  L+ G  K ++ E +    E+M    ++    A+  +I  L
Sbjct: 1145 RLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 1204

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY--------AKE-------------- 281
            C+ G   +A  ++      G +P+ ITYS LI G+        AKE              
Sbjct: 1205 CKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNK 1264

Query: 282  -------------GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
                         G + E +K+Y  M              L+SSLC+ GKL EA+K+   
Sbjct: 1265 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 1324

Query: 329  MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            M    LVP    Y+ ++  +   G+   A    ++M+  G  PS
Sbjct: 1325 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS 1368



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 144/352 (40%), Gaps = 35/352 (9%)

Query: 18   GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
            GF  S+ + N ++  + K  R +LVW +++ M +    PN  T   LI+ LC  G L+  
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 78   VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +                                   LLK+M     +   + Y+ ++  
Sbjct: 1004 GN-----------------------------------LLKQMEENGFVPTIVTYNTLLNW 1028

Query: 138  KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              K    ++A+ + + M+ +G  A+   Y  FI   C   +  +A  L+++M    + P 
Sbjct: 1029 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 1088

Query: 198  DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            + T+N LI G  K  +I  +     +M    L P+C  +N +I   C  G+ ++A  +L 
Sbjct: 1089 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 1148

Query: 258  LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                 G   NE+TY  L+ G  K  + +   +L   M    +     AYT LI  LC+ G
Sbjct: 1149 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 1208

Query: 318  KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             L+EA +    M    + P V  Y SL+      GN   A  +   M   GL
Sbjct: 1209 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 1260



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/353 (20%), Positives = 151/353 (42%), Gaps = 1/353 (0%)

Query: 24   ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            + +  L+  ++K+      +  ++ M++    P+      +I +  + GQ+    D    
Sbjct: 1476 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 1535

Query: 84   IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
            +      P +     L+    +++ +   + L   M+R+ +  D + +  ++    K   
Sbjct: 1536 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 1595

Query: 144  LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             +  + +  +M+  G  A+ F +   I  Y E GK+ +A  L+  M   G+ P  +T+N 
Sbjct: 1596 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 1655

Query: 204  LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
            +  G  K     ES     +M+   ++P  + +  +I  +C  G+ + A  +       G
Sbjct: 1656 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 1715

Query: 264  FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            F  +E+  S ++ G    G+ ++ + +   M    + PT+  +T+L+   C+  K+ EA 
Sbjct: 1716 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 1775

Query: 324  KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
            K   +M+   L   V  Y  L+      G+ A A  L EEM    L P+ T+Y
Sbjct: 1776 KLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTY 1828



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 6/332 (1%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A D    +   G   +L ++N L+H  +K         +Y  M+    +P++ T  +LI 
Sbjct: 1529 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 1588

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             L K G     V +L ++  +           LI +  +  ++ +   L+  M    +  
Sbjct: 1589 GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP 1648

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            D   Y+ I     K      + VV  EML+ G       Y T I   C  G I+ A  L 
Sbjct: 1649 DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 1708

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             EME  G   ++   + ++ G     + E+++   + M+  +LLP+ + F  ++ R C  
Sbjct: 1709 DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 1768

Query: 247  GNAKQA---NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
                +A    G++ L    G   + + Y+ LI G    G+     +LY EM ++ + P +
Sbjct: 1769 AKIAEALKLKGVMELC---GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNI 1825

Query: 304  PAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
              Y  L+ ++     L + +K    ++   L+
Sbjct: 1826 TTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/363 (19%), Positives = 150/363 (41%), Gaps = 36/363 (9%)

Query: 43   WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
            +  +  M++  ++P+  T  +L+  LCKGG L      L+R+H    +   ++  +L+  
Sbjct: 1354 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 1413

Query: 103  IIQEERIEEGMVLLKRMLRKNMIHDT---------------------------------- 128
              +   + E + L  +M++ N++ D+                                  
Sbjct: 1414 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 1473

Query: 129  --IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              + Y+ +V    K  + ++A   +EEM+K+G   ++  +   I +    G++ +AN   
Sbjct: 1474 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 1533

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
              M   G+ P   T+N+L+ G +K + +   LS    MM   + P    F+ +I  L + 
Sbjct: 1534 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 1593

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            G       +L   + +G   ++ T++ LI  Y++ G++++   L   M    + P    Y
Sbjct: 1594 GIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTY 1653

Query: 307  TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
              + + L +     E+      M  + ++P    Y +L+      G+   A  L +EM +
Sbjct: 1654 NHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 1713

Query: 367  EGL 369
             G 
Sbjct: 1714 LGF 1716



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 136/310 (43%)

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            LI    K G +   V+  + +      P V     ++  +++++R E    L + M  K 
Sbjct: 920  LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 979

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            +  +   +++++       NL+ A  + ++M + GF      Y T +  YC+ G+ + A 
Sbjct: 980  ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 1039

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             L+  M   G++    T+N+ I+      R  ++    ++M    + P+   +N +I   
Sbjct: 1040 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 1099

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
             + G    A  +         SPN +TY+ LIGG+   G+ +E L+L   ME   +    
Sbjct: 1100 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159

Query: 304  PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
              Y +L++ LC+  K E A +  + M+ + +V G   Y  L+    + G   +A+ L   
Sbjct: 1160 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 1219

Query: 364  MVSEGLKPST 373
            M  +G+ P  
Sbjct: 1220 MYKDGVNPDV 1229



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 51/296 (17%)

Query: 126  HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF----------------VYTTF 169
            H T  Y L  +  VK R  +SA  +   + + G  + S                 V+   
Sbjct: 861  HLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLL 920

Query: 170  IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
            I  Y + G I+ A    + +   G KP   T N+++    K KR E   S   +M  + +
Sbjct: 921  IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGI 980

Query: 230  LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
             P+   FN +I  LC  GN K+A  +L    + GF P  +TY+ L+  Y K+G  +  ++
Sbjct: 981  CPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIE 1040

Query: 290  -----------------------------------LYYEMEYKSISPTLPAYTSLISSLC 314
                                               L  +M  + ISP    Y +LI+   
Sbjct: 1041 LIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFV 1100

Query: 315  QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            + GK+  A + F  M    L P    Y +L+G H   G+  +AL L + M + GL+
Sbjct: 1101 KEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 1156



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/383 (20%), Positives = 149/383 (38%), Gaps = 36/383 (9%)

Query: 24   ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            + +NTL+    KS        ++  M++N   P+  T  +L++ LC+ G+  T V +   
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464

Query: 84   IHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
              G+    P  ++ T L+  + +    +      + M++K    DT+A++ I+ +  +  
Sbjct: 1465 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 1524

Query: 143  NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
             +  A   +  M   G   N   Y   +  + +   +     L   M   G+ P   TF+
Sbjct: 1525 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 1584

Query: 203  LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
             LI G +K+   +  +    +M+    L     FN +I +  E G  ++A  ++      
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 1644

Query: 263  GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ------- 315
            G  P+  TY+H+  G  K+   +E   + +EM    + P    Y +LI+ +C+       
Sbjct: 1645 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 1704

Query: 316  ----------------------------CGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
                                        CGK E+A      M    L+P +  + +L+  
Sbjct: 1705 FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHR 1764

Query: 348  HLEKGNKAKALHLCEEMVSEGLK 370
                   A+AL L   M   GLK
Sbjct: 1765 FCRDAKIAEALKLKGVMELCGLK 1787


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 167/361 (46%), Gaps = 1/361 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G S + I++N L+H    S +      I++ M  +   P+  T  TL+  LCK G+  
Sbjct: 234 DQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSM 293

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + D +  K   P   +  +L+     E  + +   LL  M+R     D   +++++
Sbjct: 294 EARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILI 353

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A  K   ++ A++ + +M ++G   N   Y T + A C  GK+++A      + + GL 
Sbjct: 354 GAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLT 413

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    F  LI G     + +++     +M+ R + P+   FN ++  LC+ G   +A  +
Sbjct: 414 PNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNI 473

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
             L +      + ITY+ LI GY  +G++ E  KL   M    + P    Y ++I+  C+
Sbjct: 474 FDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCK 533

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK-PSTS 374
            G++E+A   F+ M S  + PG+ IY +++    +    A A  L   M+  G+K P  +
Sbjct: 534 NGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGT 593

Query: 375 Y 375
           Y
Sbjct: 594 Y 594



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 163/355 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    ++S+ T+I+ + +  + D  + ++  ML+    PN  T   L+   C  G+ +  
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +  ++      P V+   +L++ + +  R  E   +   M++K    D+  Y  +++ 
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 L     + + M++ G   + +++   IGAY ++G ++EA     +M   GL P 
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPN 380

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  +++   +  ++++++S  ++++S  L P+   F  +I  LC C    +A  +  
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV 440

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G  PN I ++ L+    KEG +     ++  M    +   +  YT+LI   C  G
Sbjct: 441 EMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDG 500

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K++EA K  + M    + P    Y +++  + + G    A  L  +M S+G+ P 
Sbjct: 501 KVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPG 555



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 7/372 (1%)

Query: 7   AFDVC-RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIR---YPNEATI 61
           A D+  R +   G + +  S+N L+  +   +R+     +   M+ ++ R    P+  + 
Sbjct: 150 AMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSY 209

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I+ L + GQL     + D +  +  SP  I    L+       + +E + + ++M R
Sbjct: 210 TTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCR 269

Query: 122 KNMIHDTIAY-SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             +  D + Y +L+VY     R++E A  V++ M+K+G   +S +Y T +  Y   G + 
Sbjct: 270 DGVEPDVVTYNTLMVYLCKNGRSME-ARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLV 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           + + L+  M   G +P    FN+LI   AK   ++E++    +M  + L P+   +  ++
Sbjct: 329 QMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVM 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G    A       + +G +PN + +  LI G     +  +  +L  EM  + I 
Sbjct: 389 DALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGIC 448

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    + +L++ LC+ G +  A   F +M    +   V  Y +L+  +   G   +A  L
Sbjct: 449 PNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKL 508

Query: 361 CEEMVSEGLKPS 372
            E MV +G+KP+
Sbjct: 509 LEGMVLDGVKPN 520



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 151/327 (46%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI    K    D     +  M +   +PN  T  T++ ALC+ G++   +   DR+ 
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  +P  +V  +LI  +   ++ ++   L   M+ + +  +TI ++ ++    K   + 
Sbjct: 409 SEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVT 468

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +++ M++     +   YTT I  YC  GK++EA  L++ M   G+KP + T+N +I
Sbjct: 469 RAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTII 528

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  RIE++ S   QM S+ + P    ++ ++  L +      A  +    +  G  
Sbjct: 529 NGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
               TY+ ++ G  +     + L++++ +           +  +I +L + G+ +EA   
Sbjct: 589 LPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDL 648

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKG 352
           F  + +  LVP V  Y  ++   +E+G
Sbjct: 649 FASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 147/344 (42%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q+G   +++++ T++  + +  + D     +  ++     PN    RTLI  LC   +
Sbjct: 372 MRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDK 431

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                ++   + G+   P  I   +L+  + +E  +     +   M+R ++  D I Y+ 
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        ++ A  + E M+  G   N   Y T I  YC+ G+IE+A  L ++M + G
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P    ++ ++ G  + +RI  +      M+   +      +N +++ LC+      A 
Sbjct: 552 VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDAL 611

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M        F     T++ +I    K G   E   L+  +  + + P +  Y  ++ SL
Sbjct: 612 RMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 671

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + G LEE D  F  ++ +       +  +LVG   +KG   KA
Sbjct: 672 IEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 44/286 (15%)

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
           I + +  L  +  E     + L  RM R     D   YS+++    +  +L+ A      
Sbjct: 66  IFDLNSALSAVARESPAVALSLFNRMPRA----DLCTYSIVIGCCSRAGHLDLAFAALGR 121

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
           +++ G++A +  ++  +   C   +  +A +  ++ M   G  P   ++N+L++G     
Sbjct: 122 VIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDEN 181

Query: 213 RIEESLSYCEQMMSRKLLPSCS----AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
           R +++L     MM+      C     ++  +I  L   G   +A  +    LD+G SPN 
Sbjct: 182 RSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNC 241

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           ITY+ L+ GY   G+ +E + ++ +M    + P +  Y +L+  LC+ G+  EA K F  
Sbjct: 242 ITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVF-- 299

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
                                            + MV +G KP +S
Sbjct: 300 ---------------------------------DSMVKKGHKPDSS 312


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 175/398 (43%), Gaps = 46/398 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ +NT+I  + K  R+     ++  M E   +P+  T   +I+  C  G+      +L
Sbjct: 252 NVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLL 311

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +  ++ +P V+  ++LI   ++E +  E   L   ML +++I  T+ YS ++    K 
Sbjct: 312 QEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQ 371

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L++A  ++     +G S +   + T I  YC   ++++   L+ EM  AGL     T+
Sbjct: 372 NRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY 431

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT---- 257
             LI G  +   +  +    ++M+S  + P+    N ++  LC+ G  K A  M      
Sbjct: 432 TTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK 491

Query: 258 --LALD-----KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
             + +D      G  P+  TY+ LI G   EG+  E  +LY EM ++ I P    Y+S+I
Sbjct: 492 SKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG------------------ 352
             LC+  +L+EA + F  M S S  P V  + +L+  + + G                  
Sbjct: 552 DGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIV 611

Query: 353 -----------------NKAKALHLCEEMVSEGLKPST 373
                            N   AL + +EM+S G+ P T
Sbjct: 612 ADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDT 649



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 162/344 (47%), Gaps = 12/344 (3%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R  +  +++F+ LI+   K  +      +Y  ML     P+  T  ++I   CK  +L 
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLD 375

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M      K CSP +I   +LI    + +R+++G+ LL  M    ++ +TI Y+ ++
Sbjct: 376 AAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA--- 192
           +   ++ +L +A  + +EM+  G   N     T +   C+ GK+++A  + + M+ +   
Sbjct: 436 HGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 193 --------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
                   G++P  +T+N+LI G     +  E+    E+M  R ++P    ++ MI  LC
Sbjct: 496 IDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  M      K FSP+ +T++ LI GY K G + + L+L+ EM  + I     
Sbjct: 556 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAI 615

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGI 347
            Y +LI    +   ++ A   F+ M S  + P  + I   L G+
Sbjct: 616 TYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGL 659



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 171/369 (46%), Gaps = 7/369 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLI 65
           A D+  Y+ +     S+I F  L+ VV +  R D+V  +++ M E +R P N  +   L+
Sbjct: 65  AIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKM-EMLRMPCNAYSFTILM 123

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C   +L   +    +I      P V+   +L+  +  E+RI E + L  +M + N++
Sbjct: 124 KCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPNVV 183

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
                ++ ++    +   +  A+ + + ML+ G   N   Y T +   C+ G    A  L
Sbjct: 184 ----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239

Query: 186 MQEMENAG-LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ME    + P    +N +I+G  K  R  ++ +   +M  +++ P    +N MI   C
Sbjct: 240 LRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFC 299

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A  +L   L++  +P+ +T+S LI  + KEG+  E  +LY EM  +SI P+  
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+S+I   C+  +L+ A+  F +  +    P +  + +L+  +         + L  EM
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419

Query: 365 VSEGLKPST 373
              GL  +T
Sbjct: 420 TEAGLVANT 428



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 5/319 (1%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           +P   T  TL+  LC   ++   +D+  ++    C P V+  T+L+  + +E R+ E + 
Sbjct: 148 HPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVA 203

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FSANSFVYTTFIGAY 173
           LL RML   +  + I Y  IV    KM +  SAL +  +M +      N  +Y T I   
Sbjct: 204 LLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGL 263

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
            + G+  +A+ L  EM+   + P   T+N +I G   + R  ++    ++M+ RK+ P  
Sbjct: 264 WKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDV 323

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             F+ +I    + G   +A  +    L +   P+ +TYS +I G+ K+  +     ++Y 
Sbjct: 324 VTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
              K  SP +  + +LI+  C+  ++++  K    M    LV     Y +L+    + G+
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A  L +EM+S G+ P+
Sbjct: 444 LNAAQDLLQEMISSGVCPN 462



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/398 (21%), Positives = 174/398 (43%), Gaps = 47/398 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++++F TL++ + +  R      +   MLE+   PN+ T  T++  +CK G   + +++L
Sbjct: 181 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 240

Query: 82  DRIHG-KRCSPMVIVNTSLILRI---------------IQEERIEEGMV----------- 114
            ++       P V++  ++I  +               +QE+ I   +V           
Sbjct: 241 RKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCI 300

Query: 115 ---------LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
                    LL+ ML + +  D + +S ++ A VK      A  +Y+EML R    ++  
Sbjct: 301 SGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVT 360

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y++ I  +C+  +++ A  +       G  P   TFN LI G  +AKR+++ +    +M 
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              L+ +   +  +I   C+ G+   A  +L   +  G  PN +T + L+ G    G+++
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480

Query: 286 EVLKLYYEME-----------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           + L+++  M+           +  + P +  Y  LI  L   GK  EA++ ++ M    +
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           VP    Y S++    ++    +A  + + M S+   P 
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPD 578



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 138/301 (45%), Gaps = 5/301 (1%)

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   +D+   +   R  P VI    L+  +++  R +  + L K+M    M  +  ++++
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        L  AL  + ++ K GF      + T +   C   +I EA  L  +M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            KP   TF  L+ G  +  R+ E+++  ++M+   L P+   +  ++  +C+ G+   A 
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +L  +       PN + Y+ +I G  K+G   +   L+ EM+ K I P +  Y  +I+ 
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  G+  +A++  + M    + P V  + +L+   +++G   +A  L +EM+   + PS
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 373 T 373
           T
Sbjct: 358 T 358



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 124/290 (42%), Gaps = 11/290 (3%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S  +I+FNTLI    ++ R D   ++   M E     N  T  TLI   C+ G L  
Sbjct: 387 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 446

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI----------- 125
             D+L  +      P V+   +L+  +    ++++ + + K M +  M            
Sbjct: 447 AQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVE 506

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   Y++++   +       A  +YEEM  RG   ++  Y++ I   C+  +++EA  +
Sbjct: 507 PDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
              M +    P   TFN LI G  KA  +++ L    +M  R ++     +  +I    +
Sbjct: 567 FDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRK 626

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
             N   A  +    +  G  P+ IT  +++ G   + E++  + +  +++
Sbjct: 627 VDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 1/156 (0%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +Y+ M      P+  T  ++I  LCK  +L     M D +  K  SP V+   +LI    
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +   +++G+ L   M ++ ++ D I Y  ++Y   K+ N++ AL +++EM+  G   ++ 
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTI 650

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEME-NAGLKPYDE 199
                +       ++E A  ++++++ + G +  DE
Sbjct: 651 TIRNMLTGLWSKEELERAVAMLEDLQMSVGYQLEDE 686


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 169/371 (45%), Gaps = 1/371 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  +  ++E  G  L+ +++ TL++ + K ++ +L  R+ + M  N           
Sbjct: 389 FEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 448

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LCK G L   V ++  ++    +P VI  +SLI    +   I+    ++ RM R  
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + I YS ++Y   +  N+  A+ VY  M   G  A+ F     + + C  GK+ EA 
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             +  M   GL P   T++ +I G         + S+ + M+     PS   +  +++ L
Sbjct: 569 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ GN  +A   L        + + + Y+ L+    K G + E + L+ +M   ++ P  
Sbjct: 629 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 688

Query: 304 PAYTSLISSLCQCGKLEEADKYFKI-MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             Y+SL++ LC+ GK   A   F   M   +L P   +Y  LV    + G+   A +  E
Sbjct: 689 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 748

Query: 363 EMVSEGLKPST 373
           EM+ +G  P T
Sbjct: 749 EMMKKGTCPDT 759



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 174/404 (43%), Gaps = 37/404 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+ + + R +  +G   ++ +FN LI+ +           + + M EN   P   T  TL
Sbjct: 215 ELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTL 274

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++  CK G+ +  ++++D +  K     V      I  +    R  +  +LLK+M RK M
Sbjct: 275 LNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM-RKEM 333

Query: 125 IH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           I  + + Y+ ++   VK   +  A  V+ EM K   S N   Y   IG +C  G  EEA 
Sbjct: 334 ISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEAL 393

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  ME AGL+  + T+  L+ G  K ++ E +    E+M    ++    A+  +I  L
Sbjct: 394 RLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 453

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY--------AKE-------------- 281
           C+ G   +A  ++      G +P+ ITYS LI G+        AKE              
Sbjct: 454 CKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNK 513

Query: 282 -------------GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
                        G + E +K+Y  M              L+SSLC+ GKL EA+K+   
Sbjct: 514 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 573

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M    LVP    Y+ ++  +   G+   A    ++M+  G  PS
Sbjct: 574 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS 617



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 144/352 (40%), Gaps = 35/352 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  S+ + N ++  + K  R +LVW +++ M +    PN  T   LI+ LC  G L+  
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            +                                   LLK+M     +   + Y+ ++  
Sbjct: 253 GN-----------------------------------LLKQMEENGFVPTIVTYNTLLNW 277

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K    ++A+ + + M+ +G  A+   Y  FI   C   +  +A  L+++M    + P 
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           + T+N LI G  K  +I  +     +M    L P+C  +N +I   C  G+ ++A  +L 
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G   NE+TY  L+ G  K  + +   +L   M    +     AYT LI  LC+ G
Sbjct: 398 HMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG 457

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            L+EA +    M    + P V  Y SL+      GN   A  +   M   GL
Sbjct: 458 MLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 509



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/353 (20%), Positives = 151/353 (42%), Gaps = 1/353 (0%)

Query: 24   ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            + +  L+  ++K+      +  ++ M++    P+      +I +  + GQ+    D    
Sbjct: 725  VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 784

Query: 84   IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
            +      P +     L+    +++ +   + L   M+R+ +  D + +  ++    K   
Sbjct: 785  MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 844

Query: 144  LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             +  + +  +M+  G  A+ F +   I  Y E GK+ +A  L+  M   G+ P  +T+N 
Sbjct: 845  PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 904

Query: 204  LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
            +  G  K     ES     +M+   ++P  + +  +I  +C  G+ + A  +       G
Sbjct: 905  IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 964

Query: 264  FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            F  +E+  S ++ G    G+ ++ + +   M    + PT+  +T+L+   C+  K+ EA 
Sbjct: 965  FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 1024

Query: 324  KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
            K   +M+   L   V  Y  L+      G+ A A  L EEM    L P+ T+Y
Sbjct: 1025 KLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTY 1077



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 6/332 (1%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A D    +   G   +L ++N L+H  +K         +Y  M+    +P++ T  +LI 
Sbjct: 778  ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 837

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             L K G     V +L ++  +           LI +  +  ++ +   L+  M    +  
Sbjct: 838  GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP 897

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            D   Y+ I     K      + VV  EML+ G       Y T I   C  G I+ A  L 
Sbjct: 898  DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 957

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             EME  G   ++   + ++ G     + E+++   + M+  +LLP+ + F  ++ R C  
Sbjct: 958  DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 1017

Query: 247  GNAKQA---NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
                +A    G++ L    G   + + Y+ LI G    G+     +LY EM ++ + P +
Sbjct: 1018 AKIAEALKLKGVMELC---GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNI 1074

Query: 304  PAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
              Y  L+ ++     L + +K    ++   L+
Sbjct: 1075 TTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 136/310 (43%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    K G +   V+  + +      P V     ++  +++++R E    L + M  K 
Sbjct: 169 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 228

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  +   +++++       NL+ A  + ++M + GF      Y T +  YC+ G+ + A 
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  M   G++    T+N+ I+      R  ++    ++M    + P+   +N +I   
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G    A  +         SPN +TY+ LIGG+   G+ +E L+L   ME   +    
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 408

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +L++ LC+  K E A +  + M+ + +V G   Y  L+    + G   +A+ L   
Sbjct: 409 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 468

Query: 364 MVSEGLKPST 373
           M  +G+ P  
Sbjct: 469 MYKDGVNPDV 478



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/363 (19%), Positives = 150/363 (41%), Gaps = 36/363 (9%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           +  +  M++  ++P+  T  +L+  LCKGG L      L+R+H    +   ++  +L+  
Sbjct: 603 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 662

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDT---------------------------------- 128
             +   + E + L  +M++ N++ D+                                  
Sbjct: 663 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 722

Query: 129 --IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ +V    K  + ++A   +EEM+K+G   ++  +   I +    G++ +AN   
Sbjct: 723 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 782

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G+ P   T+N+L+ G +K + +   LS    MM   + P    F+ +I  L + 
Sbjct: 783 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 842

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G       +L   + +G   ++ T++ LI  Y++ G++++   L   M    + P    Y
Sbjct: 843 GIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTY 902

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             + + L +     E+      M  + ++P    Y +L+      G+   A  L +EM +
Sbjct: 903 NHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 962

Query: 367 EGL 369
            G 
Sbjct: 963 LGF 965



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 51/296 (17%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF----------------VYTTF 169
           H T  Y L  +  VK R  +SA  +   + + G  + S                 V+   
Sbjct: 110 HLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLL 169

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  Y + G I+ A    + +   G KP   T N+++    K KR E   S   +M  + +
Sbjct: 170 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGI 229

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P+   FN +I  LC  GN K+A  +L    + GF P  +TY+ L+  Y K+G  +  ++
Sbjct: 230 CPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIE 289

Query: 290 -----------------------------------LYYEMEYKSISPTLPAYTSLISSLC 314
                                              L  +M  + ISP    Y +LI+   
Sbjct: 290 LIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFV 349

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           + GK+  A + F  M    L P    Y +L+G H   G+  +AL L + M + GL+
Sbjct: 350 KEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLR 405



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/383 (20%), Positives = 149/383 (38%), Gaps = 36/383 (9%)

Query: 24   ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            + +NTL+    KS        ++  M++N   P+  T  +L++ LC+ G+  T V +   
Sbjct: 654  VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713

Query: 84   IHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
              G+    P  ++ T L+  + +    +      + M++K    DT+A++ I+ +  +  
Sbjct: 714  AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 773

Query: 143  NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
             +  A   +  M   G   N   Y   +  + +   +     L   M   G+ P   TF+
Sbjct: 774  QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 833

Query: 203  LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
             LI G +K+   +  +    +M+    L     FN +I +  E G  ++A  ++      
Sbjct: 834  SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 893

Query: 263  GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ------- 315
            G  P+  TY+H+  G  K+   +E   + +EM    + P    Y +LI+ +C+       
Sbjct: 894  GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 953

Query: 316  ----------------------------CGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
                                        CGK E+A      M    L+P +  + +L+  
Sbjct: 954  FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHR 1013

Query: 348  HLEKGNKAKALHLCEEMVSEGLK 370
                   A+AL L   M   GLK
Sbjct: 1014 FCRDAKIAEALKLKGVMELCGLK 1036


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 14/349 (4%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I FNTLI    K+    L   + + M +     +  +  TLI+  CK G+      +L
Sbjct: 146 DVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLL 205

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             I   R      V  S+   I  ++RI++   L       N+  D I Y+ I+    K 
Sbjct: 206 HEISESRG-----VKDSVFFNI--DDRIKKDDNL-------NLEADLITYTTIISTYCKQ 251

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             LE A  +YEEM+  GF  +   Y++ +   C+ G++ EA  L++EM+  G+ P    +
Sbjct: 252 HGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAY 311

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI+   KA    E+ +   Q++ R +         ++  L +    K+A  M      
Sbjct: 312 TTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSK 371

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
               PN ITY+ LI GY K G+++ V  L  EME K I+P +  Y+S+I+   + G L+E
Sbjct: 372 LNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDE 431

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           A    K M   +++P   +Y  L+  + + G +  A  L  EM   GLK
Sbjct: 432 AINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLK 480



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/388 (22%), Positives = 179/388 (46%), Gaps = 14/388 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   + ++     ++++N LI+ + +  + +    +Y  M+E    PN+AT   +I 
Sbjct: 537 ALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIK 595

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G+L   +++ + +   +  P  I   +L++ + +   IE+ M +L  M    +  
Sbjct: 596 AYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHP 655

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + + +++ A  K     + L ++E+++  G   N   Y   I  +C     ++A  ++
Sbjct: 656 NLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVL 715

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G      T+N LI G  ++  ++++L+   QM++  + P+   +N ++  L   
Sbjct: 716 KYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGA 775

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   + + +     + G +P+  TY  LI GY K G  +E ++LY EM  +   P    Y
Sbjct: 776 GLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTY 835

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV------------GIHLEKGNK 354
             LIS   + GK+++A +    M+   + P    Y+ L+               L+K  +
Sbjct: 836 NVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYR 895

Query: 355 AKALHLCEEMVSEGLKPSTSYL-CSAST 381
             A +L  EM  +G  P  S + C +ST
Sbjct: 896 TDAKNLITEMNDKGFVPCKSTIACISST 923



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/387 (22%), Positives = 162/387 (41%), Gaps = 36/387 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            LI++ T+I    K    +    +Y+ M+ N   P+  T  ++++ LCK G+L    ++L
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +      P  +  T+LI  + +     E      +++ + M  D +  + +V    K 
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKS 356

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              + A  ++  + K     NS  YT  I  YC+ G +E    L+QEME   + P   T+
Sbjct: 357 SKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITY 416

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK----------- 250
           + +I G  K   ++E+++  ++M+ + ++P+   +  +I   C+ G  +           
Sbjct: 417 SSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKL 476

Query: 251 ------------------------QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
                                   +A  +L     +G   + + Y+ L+ G+ K G+   
Sbjct: 477 SGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESA 536

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            L +  EM  KSI   +  Y  LI+ L + GK  EA   +  M    L P    Y  ++ 
Sbjct: 537 ALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIK 595

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
            + ++G    AL L  EM S  + PS+
Sbjct: 596 AYCKQGELDNALELWNEMKSHKIMPSS 622



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/436 (22%), Positives = 187/436 (42%), Gaps = 71/436 (16%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     L  RG +L L+   TL+  + KS +      +++ + +    PN  T   LI 
Sbjct: 327 AFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALID 386

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G ++    +L  +  K  +P VI  +S+I    ++  ++E + ++K+ML +N+I 
Sbjct: 387 GYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIP 446

Query: 127 DTIAYSLIV---------------YAKVKMRNLESALVVY----------------EEML 155
           +   Y++++               Y ++K+  L+   V++                EE+L
Sbjct: 447 NAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELL 506

Query: 156 K----RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE-TFNLLIEGCA- 209
           K    RG   +   YT+ +  + + GK   A  +++EM    + P+D  T+N+LI G   
Sbjct: 507 KDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSI-PFDVVTYNVLINGLLE 565

Query: 210 ----KAKRIEESL-----------------SYCEQ------------MMSRKLLPSCSAF 236
               +AK +   +                 +YC+Q            M S K++PS    
Sbjct: 566 HGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITC 625

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N ++  L E G  ++A  +L      G  PN + +  L+   +K G+   VL+++ ++  
Sbjct: 626 NTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVD 685

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             +     AY +LI   C+    ++A    K M     V     Y +L+  + E  +  K
Sbjct: 686 MGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKK 745

Query: 357 ALHLCEEMVSEGLKPS 372
           AL    +M++EG+ P+
Sbjct: 746 ALATYTQMLNEGVSPN 761



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 156/366 (42%), Gaps = 49/366 (13%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G + +  ++N +I    K    D    ++  M  +   P+  T  TL+  L + G+++
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIE 639

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLI-----------------------LRIIQE------ 106
             +++L+ +      P ++++  L+                       L+I QE      
Sbjct: 640 KAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLI 699

Query: 107 ------ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS 160
                    ++   +LK M+R   + DT+ Y+ ++    +  +++ AL  Y +ML  G S
Sbjct: 700 VVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVS 759

Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS- 219
            N   Y   +G     G + E + L  +M+  GL P   T++ LI G  K    +ES+  
Sbjct: 760 PNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRL 819

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY- 278
           YCE M+++  +P  S +N +I    + G   QA  +L     +G  P+  TY  LI G+ 
Sbjct: 820 YCE-MVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWC 878

Query: 279 --AKEGEIQEVLKLYY---------EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
             +K  ++   LK  Y         EM  K   P       + S+  + GK+ +A+K  K
Sbjct: 879 NLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLK 938

Query: 328 IMKSHS 333
            + SH+
Sbjct: 939 EIFSHA 944



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 168/407 (41%), Gaps = 59/407 (14%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L+ +N LI+          V  IY  ML +   PN  T   L+ A CK G L   +D+L
Sbjct: 9   TLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLL 68

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV------ 135
             +  +     V  NT +I    Q   + +    L  M++K+   DTI  +++V      
Sbjct: 69  RNVDVE--VDTVTYNT-VIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRI 125

Query: 136 ----YAKVKMRNLES-------------------------ALVVYEEMLKRGFSANSFVY 166
               Y +  M NL S                         AL + E M K G  ++   Y
Sbjct: 126 GLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSY 185

Query: 167 TTFIGAYCEYGKIEEANCLMQEM-ENAGLKPY-----------DETFNL---------LI 205
            T I  +C+ G+ ++A  L+ E+ E+ G+K             D+  NL         +I
Sbjct: 186 NTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTII 245

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
               K   +EE+ +  E+M+    LP    ++ ++  LC+ G   +A  +L      G  
Sbjct: 246 STYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVD 305

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN + Y+ LI    K G   E      ++  + ++  L   T+L+  L +  K +EA+  
Sbjct: 306 PNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDM 365

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           F+ +   +L+P    Y +L+  + + G+  +   L +EM  + + P+
Sbjct: 366 FRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/275 (20%), Positives = 115/275 (41%), Gaps = 24/275 (8%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M + N++   + ++ ++Y       +     +Y EML      N + +   + A+C+ G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +  A   +  + N  ++    T+N +I G  +   + ++  +   M+ +         N 
Sbjct: 61  LILA---LDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +++  C  G AK    ++   +  G   + I ++ LI GY K GE+   L L   M  + 
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 299 ISPTLPAYTSLISSLCQCGKLEEA--------------DKYF-----KIMKSHSLVPGVD 339
           +   + +Y +LI+  C+ G+ ++A              D  F     +I K  +L    D
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 340 I--YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  Y +++  + ++    +A  L EEM+  G  P 
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPD 272


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 177/403 (43%), Gaps = 35/403 (8%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+F+ + +V  Y  ++GF +   S    +  + +S   +L     + M+++       + 
Sbjct: 132 RMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSW 191

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL---------------ILRIIQE 106
             ++  LCK G++     ++D +  K   P VI   +L               IL ++++
Sbjct: 192 TAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEK 251

Query: 107 E--------------------RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
                                +IEE   L   ML+K +  D   Y+ I+    K  N++ 
Sbjct: 252 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 311

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A V+++EM +R    N++ Y   I   C+ G+++ A  ++ +M++ G+      FN L++
Sbjct: 312 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 371

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K   I+E+L     M  +         N +    C     ++A  +L    ++G +P
Sbjct: 372 GYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP 431

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N +++S LI  Y KE    E  +L+  ME K  +P++  Y + I   C+ GK+EEA K  
Sbjct: 432 NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLI 491

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             M+   L+P    Y SL+      GN  +AL L  EM   GL
Sbjct: 492 NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 165/362 (45%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF  S+I++NTL++   +      V  I   M +N+   N  T   LI    +  +++ 
Sbjct: 217 KGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEE 276

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + D +  K   P V + TS+I    +   ++   VL   M  + ++ +   Y  ++ 
Sbjct: 277 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 336

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +++A ++  +M  +G   N  ++ T +  YC+ G I+EA  L   M+  G + 
Sbjct: 337 GACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 396

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T N++  G  ++ R EE+      M  R + P+  +F+ +I   C+  N  +A  + 
Sbjct: 397 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLF 456

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            +   KG +P+ +TY+  I  Y K+G+++E  KL  EM+ + + P    YTSLI      
Sbjct: 457 KVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERAS 516

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           G ++ A + F  M    L   V  Y  ++    + G   +A  L +EM  EG+ P     
Sbjct: 517 GNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIY 576

Query: 377 CS 378
            S
Sbjct: 577 SS 578



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 134/304 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G    +  + ++I+   K       + ++  M E    PN  T   LI+  CK G+++
Sbjct: 286 KKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMK 345

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M++ +  K      ++  +L+    ++  I+E + L   M +K    D    ++I 
Sbjct: 346 AAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIA 405

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +    E A  +   M +RG + N   ++  I  YC+     EA  L + ME  G  
Sbjct: 406 SGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA 465

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N  IE   K  ++EE+     +M  R L+P    +  +I      GN  +A  +
Sbjct: 466 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALEL 525

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G + N +TY+ +I G +K+G   E  KLY EM  + I P    Y+SLI+SL +
Sbjct: 526 FNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585

Query: 316 CGKL 319
            G L
Sbjct: 586 VGPL 589



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 2/235 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLISALCKGG 72
           ++ +G  ++ + FNTL+    K    D   R+ Q++++   +  +A T   + S  C+  
Sbjct: 354 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL-QNIMQQKGFEIDAFTCNIIASGFCRSN 412

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           + +    +L  +  +  +P V+  + LI    +E+   E   L K M +K      + Y+
Sbjct: 413 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYN 472

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
             +    K   +E A  +  EM +RG   +++ YT+ I      G ++ A  L  EM   
Sbjct: 473 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 532

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           GL     T+ ++I G +K  R +E+    ++M    ++P    ++ +I  L + G
Sbjct: 533 GLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 77/166 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+RG + +++SF+ LI +  K        R+++ M +  + P+  T    I   CK G+
Sbjct: 424 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 483

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    +++ +  +   P     TSLI        ++  + L   M +  +  + + Y++
Sbjct: 484 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 543

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           I+    K    + A  +Y+EM K G   +  +Y++ I +  + G +
Sbjct: 544 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 163/341 (47%), Gaps = 5/341 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S  S N L+  + ++DR DL  R ++  L     P++ T   +IS LCK GQL+   D+ 
Sbjct: 152 SAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDVA 211

Query: 82  DRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
             + G    P V+   +LI    +  +  ++    +LLK M +  +  + + +++++   
Sbjct: 212 KDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGY 271

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K  N+ +A+ V+EEM + G  AN   YT+ +   C  GK+E++  L++EME  GL    
Sbjct: 272 CKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATL- 330

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T N ++ G  K   + E+  + + M  + + P+   +N +I      G  K+A      
Sbjct: 331 PTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGA 390

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              KG SP+  TY+ LI G+    + + V  L  EM+   +   L  Y  LI +LC  G+
Sbjct: 391 MAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGE 450

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           + +A K    M    L P    Y +++    EKG+ AK  H
Sbjct: 451 VRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGD-AKGAH 490



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 130/284 (45%), Gaps = 7/284 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + Q G   +++++ +L+  + +  + +   ++ + M E +      T+ ++++
Sbjct: 280 AIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEM-EELGLATLPTLNSVLN 338

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G +      +D +  K   P V+   +LI    +  +++E       M  K +  
Sbjct: 339 GFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISP 398

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ ++       +  S   + +EM + G  A+   Y   IGA C  G++ +A  L+
Sbjct: 399 DVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLL 458

Query: 187 QEMENAGLKPYDETFNLLIEG-CAK--AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            EM   GL+P   T+N +I G C K  AK   +     E+   R  + +C+ F   ++  
Sbjct: 459 DEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVF---LKYF 515

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           C+ G   +AN +L   L+KG  PN ITY  +  G  ++G + ++
Sbjct: 516 CKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDI 559



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 4/217 (1%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           +  ++F     + A     +++ A    +      + P   TFN++I G  K  ++ ++ 
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAG 208

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ---ANGMLTLALDKGFSPNEITYSHLI 275
              + M    L+PS   +N +I    + G A +    + +L      G SPN +T++ LI
Sbjct: 209 DVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLI 268

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            GY KE  I   +K++ EM    I   +  YTSL+S LC+ GK+E++ K  + M+   L 
Sbjct: 269 NGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA 328

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +    S++    +KG   +A    + M  +G+KP+
Sbjct: 329 T-LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPN 364


>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 178/375 (47%), Gaps = 8/375 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-----NIRYPN 57
           + E  FDV   L++ GF  S  SFN  +    K  R DLVW++Y+ M+E     NI   +
Sbjct: 144 MVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNI---D 200

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             T+  LI A C   ++    ++L ++  K       V  +LI    ++++ +    +L 
Sbjct: 201 VETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILH 260

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M+          Y  I+   +K R  + A  V+ ++  RG+  +  +YTT I  +C+ G
Sbjct: 261 IMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMG 320

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            + EA  L  EM   GL P + T+N++I G  K +   E+    + M  R    +  +++
Sbjct: 321 LLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYS 380

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            MI  L   G   +A  +      KG + + I+Y+ LI G  +EGE+ +   L  ++  +
Sbjct: 381 TMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQ 440

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P++ ++T LI  LC+ G  E A +  K M    L P    ++ ++    +KG+ A+ 
Sbjct: 441 GLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQG 500

Query: 358 LHLCEEMVSEGLKPS 372
           +    +M+S  LKP+
Sbjct: 501 MEWLLKMLSWKLKPN 515



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 109/230 (47%)

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
           ++L++G   ++ V+   I  +C+  + +  + ++  M      P   T+  +I G  K +
Sbjct: 226 QVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRR 285

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           + +E+      +  R   P    +  +I+  C+ G   +A  +    + KG  PNE TY+
Sbjct: 286 KNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYN 345

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            +I GY K  +  E  KLY +M  +  +  + +Y+++IS L   GK +EA   F  M   
Sbjct: 346 VMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRK 405

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
            +   +  Y SL+    ++G  AKA +L  +++ +GL+PS S       C
Sbjct: 406 GIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKC 455



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 6/202 (2%)

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           E G +EE   +   ++  G  P   +FN+ +  C K  R +      E M+   +  +  
Sbjct: 141 ENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNID 200

Query: 235 AFNEMIRRLCE--CGNAKQANG--MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
              E +  L +  C   K  NG  +L   L+KG   +   ++ LI G+ K+ +   V ++
Sbjct: 201 V--ETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEI 258

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
            + M     +P++  Y  +I+ L +  K +EA + F  +K     P   +Y +++    +
Sbjct: 259 LHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCD 318

Query: 351 KGNKAKALHLCEEMVSEGLKPS 372
            G  A+A  L  EM+ +GL P+
Sbjct: 319 MGLLAEARKLWFEMIQKGLVPN 340


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 177/403 (43%), Gaps = 35/403 (8%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+F+ + +V  Y  ++GF +   S    +  + +S   +L     + M+++       + 
Sbjct: 136 RMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSW 195

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL---------------ILRIIQE 106
             ++  LCK G++     ++D +  K   P VI   +L               IL ++++
Sbjct: 196 TAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEK 255

Query: 107 E--------------------RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
                                +IEE   L   ML+K +  D   Y+ I+    K  N++ 
Sbjct: 256 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 315

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A V+++EM +R    N++ Y   I   C+ G+++ A  ++ +M++ G+      FN L++
Sbjct: 316 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 375

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K   I+E+L     M  +         N +    C     ++A  +L    ++G +P
Sbjct: 376 GYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP 435

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N +++S LI  Y KE    E  +L+  ME K  +P++  Y + I   C+ GK+EEA K  
Sbjct: 436 NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLI 495

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             M+   L+P    Y SL+      GN  +AL L  EM   GL
Sbjct: 496 NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 165/362 (45%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF  S+I++NTL++   +      V  I   M +N+   N  T   LI    +  +++ 
Sbjct: 221 KGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEE 280

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + D +  K   P V + TS+I    +   ++   VL   M  + ++ +   Y  ++ 
Sbjct: 281 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 340

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   +++A ++  +M  +G   N  ++ T +  YC+ G I+EA  L   M+  G + 
Sbjct: 341 GACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 400

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T N++  G  ++ R EE+      M  R + P+  +F+ +I   C+  N  +A  + 
Sbjct: 401 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLF 460

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            +   KG +P+ +TY+  I  Y K+G+++E  KL  EM+ + + P    YTSLI      
Sbjct: 461 KVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERAS 520

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           G ++ A + F  M    L   V  Y  ++    + G   +A  L +EM  EG+ P     
Sbjct: 521 GNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIY 580

Query: 377 CS 378
            S
Sbjct: 581 SS 582



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 134/304 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G    +  + ++I+   K       + ++  M E    PN  T   LI+  CK G+++
Sbjct: 290 KKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMK 349

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               M++ +  K      ++  +L+    ++  I+E + L   M +K    D    ++I 
Sbjct: 350 AAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIA 409

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +    E A  +   M +RG + N   ++  I  YC+     EA  L + ME  G  
Sbjct: 410 SGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA 469

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N  IE   K  ++EE+     +M  R L+P    +  +I      GN  +A  +
Sbjct: 470 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALEL 529

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G + N +TY+ +I G +K+G   E  KLY EM  + I P    Y+SLI+SL +
Sbjct: 530 FNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589

Query: 316 CGKL 319
            G L
Sbjct: 590 VGPL 593



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 2/235 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLISALCKGG 72
           ++ +G  ++ + FNTL+    K    D   R+ Q++++   +  +A T   + S  C+  
Sbjct: 358 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL-QNIMQQKGFEIDAFTCNIIASGFCRSN 416

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           + +    +L  +  +  +P V+  + LI    +E+   E   L K M +K      + Y+
Sbjct: 417 RREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYN 476

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
             +    K   +E A  +  EM +RG   +++ YT+ I      G ++ A  L  EM   
Sbjct: 477 AFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQL 536

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           GL     T+ ++I G +K  R +E+    ++M    ++P    ++ +I  L + G
Sbjct: 537 GLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/166 (21%), Positives = 77/166 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+RG + +++SF+ LI +  K        R+++ M +  + P+  T    I   CK G+
Sbjct: 428 MEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK 487

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++    +++ +  +   P     TSLI        ++  + L   M +  +  + + Y++
Sbjct: 488 MEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTV 547

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           I+    K    + A  +Y+EM K G   +  +Y++ I +  + G +
Sbjct: 548 IISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 167/359 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++G    ++++NTLI   +     +  + +   M      P   T  T+I+ LCK G+
Sbjct: 251 VQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGK 310

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +   ++   +     SP      SL++   ++    E   +   M  ++++ D + +S 
Sbjct: 311 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSS 370

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +  NL+ AL+ +  + + G   ++ +YT  I  YC  G I EA  L  EM   G
Sbjct: 371 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
                 T+N ++ G  K K + E+     +M  R L P       +I   C+ GN + A 
Sbjct: 431 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAM 490

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     +K    + +TY+ L+ G+ K G+I    +++ +M  K I PT  +++ L+++L
Sbjct: 491 ELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G L EA + +  M S S+ P V I  S++  +   GN +      E+M+SEG  P 
Sbjct: 551 CSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 159/365 (43%), Gaps = 37/365 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A++    L  +G+++S+ + N LI  + +    +L WRIYQ +  +    N  T+  +++
Sbjct: 174 AYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVN 233

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G+++     L  +  K   P                                   
Sbjct: 234 ALCKDGKMEKVGTFLSEVQEKGVYP----------------------------------- 258

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++ A      +E A  +   M  +GFS   + Y T I   C++GK E A  + 
Sbjct: 259 DIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVF 318

Query: 187 QEMENAGLKPYDETF-NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM  +GL P   T+ +LL+E C K   +E    + + M SR ++P    F+ M+     
Sbjct: 319 AEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSD-MRSRDVVPDLVCFSSMMSLFTR 377

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN  +A        + G  P+ + Y+ LI GY ++G I E + L  EM  +  +  +  
Sbjct: 378 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVT 437

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +++  LC+   L EADK F  M    L P       L+  H + GN   A+ L ++M 
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK 497

Query: 366 SEGLK 370
            + +K
Sbjct: 498 EKRIK 502



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 176/372 (47%), Gaps = 2/372 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF++   +  +GFS  + ++NT+I+ + K  + +    ++  ML +   P+  T R
Sbjct: 275 LMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 334

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +L+   CK G      ++   +  +   P ++  +S++    +   +++ ++    +   
Sbjct: 335 SLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 394

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +I D + Y++++    +   +  A+ +  EML++G + +   Y T +   C+   + EA
Sbjct: 395 GLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 454

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + L  EM   GL P   T  +LI+G  K   ++ ++   ++M  +++      +N ++  
Sbjct: 455 DKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDG 514

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + G+   A  +    + K   P  I++S L+     +G + E  +++ EM  KSI PT
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPT 574

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +    S+I   C+ G   + + + + M S   VP    Y +L+   +++ N +KA  L +
Sbjct: 575 VMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVK 634

Query: 363 EMVSE--GLKPS 372
           +M  +  GL P 
Sbjct: 635 KMEEKQGGLVPD 646



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 161/362 (44%), Gaps = 23/362 (6%)

Query: 12  RYLEQRGFSL-----SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           R+++Q GF+      + +S + +IH++ +S R          M+          + +L+S
Sbjct: 87  RFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVS 146

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G   +  D+L R                    +Q  ++ E       +  K    
Sbjct: 147 TYSNCGSNDSVFDLLIRT------------------FVQARKLREAYEAFTLLRSKGYTV 188

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              A + ++ + V++  +E A  +Y+E+ + G   N +     + A C+ GK+E+    +
Sbjct: 189 SIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFL 248

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            E++  G+ P   T+N LI   +    +EE+      M S+   P    +N +I  LC+ 
Sbjct: 249 SEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKH 308

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +    L  G SP+  TY  L+    K+G+  E   ++ +M  + + P L  +
Sbjct: 309 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCF 368

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +S++S   + G L++A  YF  +K   L+P   IY  L+  +  KG  ++A++L  EM+ 
Sbjct: 369 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ 428

Query: 367 EG 368
           +G
Sbjct: 429 QG 430



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 139/288 (48%), Gaps = 2/288 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q+G ++ ++++NT++H + K        +++  M E   +P+  T+  LI   CK G LQ
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQ 487

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++  ++  KR    V+   +L+    +   I+    +   M+ K ++   I++S++V
Sbjct: 488 NAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILV 547

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A     +L  A  V++EM+ +       +  + I  YC  G   +    +++M + G  
Sbjct: 548 NALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFV 607

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK--LLPSCSAFNEMIRRLCECGNAKQAN 253
           P   ++N LI G  K + + ++    ++M  ++  L+P    +N ++   C     K+A 
Sbjct: 608 PDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAE 667

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +L   +++G +P+  TY+ LI G+  +  + E  + + EM  +  SP
Sbjct: 668 AVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/230 (20%), Positives = 91/230 (39%), Gaps = 37/230 (16%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + ++++   L ++++NTL+    K    D    I+  M+     P   +   L++
Sbjct: 489 AMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVN 548

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALC  G L     + D +  K   P V++  S+I    +     +G + L++M+ +  + 
Sbjct: 549 ALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVP 608

Query: 127 DTIAYSLIVYAKVKMRNLESAL-------------------------------------V 149
           D I+Y+ ++Y  VK  N+  A                                       
Sbjct: 609 DCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEA 668

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           V  +M++RG + +   YT+ I  +     + EA     EM   G  P D+
Sbjct: 669 VLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDK 718


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 158/347 (45%), Gaps = 5/347 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N L+  + + +    V  +Y +M +    PN  T   LI ALC+  ++     MLD + 
Sbjct: 125 YNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMS 184

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            K C P  + + +++  + +  R+EE      R      +    +Y+ +V+A      + 
Sbjct: 185 RKGCHPDEVSHGTIVSGMCKLGRVEEA-----RGFLAETVPVQASYNAVVHALCGEFRMW 239

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
               V  EM++RG   N   YTT + A+C+  ++  A  ++  M + G  P   TF  L+
Sbjct: 240 EVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALV 299

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G  +  ++ ++LS    M+     PS  ++N +IR LC  G+ K A             
Sbjct: 300 KGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALL 359

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN  TYS L+ G++  G++   + ++ EM+     P +  YT++I  LC+    ++A+  
Sbjct: 360 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 419

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M   +  P    + +L+G   + G   +AL++   M   G  P+
Sbjct: 420 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 466



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 166/357 (46%), Gaps = 4/357 (1%)

Query: 12  RYLEQRGFSLSLI----SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           R  E RGF    +    S+N ++H +    R   V+ +   M++    PN  T  T++ A
Sbjct: 207 RVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 266

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK  +L+    +L R+    C+P V+  T+L+    ++ ++ + + +   M+ +     
Sbjct: 267 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 326

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           TI+Y++++     + +L+ AL  +  M +     N+  Y+T +  +   G ++ A  +  
Sbjct: 327 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 386

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM+++G KP    +  +I+   K    +++ S  ++M+     P+   FN +I RLC+CG
Sbjct: 387 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCG 446

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +A  +       G  PN+ TY+ L+ G  +EG  ++   +  EM       +L  Y 
Sbjct: 447 RVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYN 506

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           ++I+ LCQ    + A      M    + P    + +++  + ++G  + A  L  +M
Sbjct: 507 TVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 563



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 13/324 (4%)

Query: 54  RYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           R P       L+ AL +   +   V + D +      P V     LI  + Q +R++   
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV----YTTF 169
            +L  M RK    D +++  IV    K+  +E A         RGF A +      Y   
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA---------RGFLAETVPVQASYNAV 228

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           + A C   ++ E   ++ EM   GL+P   T+  +++   KA+ +  + +   +M+S   
Sbjct: 229 VHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGC 288

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P+   F  +++   E G    A  M    +D+G++P+ I+Y+ LI G    G+++  L 
Sbjct: 289 TPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALD 348

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
            +  M+  ++ P    Y++L+      G L+ A   +  MKS    P V +Y +++ +  
Sbjct: 349 FFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLC 408

Query: 350 EKGNKAKALHLCEEMVSEGLKPST 373
           +K    +A  L ++M+ +   P+T
Sbjct: 409 KKMMFDQAESLIDKMLMDNCPPNT 432



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/395 (19%), Positives = 161/395 (40%), Gaps = 40/395 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G   ++ ++N LI  + ++DR D   ++   M     +P+E +  T++S +CK G+
Sbjct: 148 MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGR 207

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++     L         P+     +++  +  E R+ E   ++  M+++ +  + + Y+ 
Sbjct: 208 VEEARGFL-----AETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 262

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           IV A  K R L  A  +   M+  G + N   +T  +  + E GK+ +A  +   M + G
Sbjct: 263 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 322

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN---------------- 237
             P   ++N+LI G      ++ +L +   M    LLP+ + ++                
Sbjct: 323 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 382

Query: 238 -------------------EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                               MI  LC+     QA  ++   L     PN +T++ LIG  
Sbjct: 383 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 442

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
              G +   L +++ M      P    Y  L+  L + G  ++A      M ++     +
Sbjct: 443 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 502

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             Y +++    +   +  A+ L   M+ +G++P  
Sbjct: 503 VTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 537


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+ SFN L+  + K +    V+ +Y+ M     +P+  T+  LI+ LC   ++   +  +
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             I  +   P V+  T+LI  +  E RI E   L  RM +     + + Y  ++     +
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 142 RNLESALVVYEEMLKR------GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            N+  AL  ++EML            N   Y+  I   C+ G  EEA CL  EM + G++
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TF++LI+   K  ++ ++    E M+   ++P+   +  +I+  C  G+   A  +
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 KG+ P+ I+Y+ LI GY K  +++E +KL+ EM +  + P +     L+ +L  
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 316 CGKLEEADKYFKIMKSHSL 334
            GK+++A + F+++K +++
Sbjct: 390 AGKVDDAKELFRVIKPYAM 408



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 161/363 (44%), Gaps = 6/363 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ-- 73
           +RG+   +++F TLI  +    R     +++  M +    PN  T  TLI  LC  G   
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213

Query: 74  --LQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             L+ + +ML+    +   C P VI  + +I  + +    EE + L   M+ + +  + +
Sbjct: 214 IALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVV 273

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            +S+++    K   +  A  + E M++ G   N F YT+ I  +C  G +  A  L   M
Sbjct: 274 TFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM 333

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            + G +P   ++N+LI G  K  ++EE++    +M+   + P       +++ L   G  
Sbjct: 334 PSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +  +        +       + G  K G I E +KL+ E+E  ++   +  +  L
Sbjct: 394 DDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCL 453

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+ GKLE A + F+ +    + P    Y S++    +KG   KA  L ++M   G 
Sbjct: 454 IDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGC 513

Query: 370 KPS 372
            P 
Sbjct: 514 SPD 516



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 146/314 (46%), Gaps = 2/314 (0%)

Query: 10  VCRYLE--QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           +C + E   +G   ++++F+ LI ++ K  +     ++ + M++    PN  T  +LI  
Sbjct: 257 ICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKG 316

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            C  G L +  ++   +  K   P VI    LI    +  ++EE M L   ML   M  D
Sbjct: 317 FCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPD 376

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
                +++ A      ++ A  ++  +       +  +   F+   C+ G I EA  L  
Sbjct: 377 VKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFN 436

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           E+E+  +K   ETF  LI+G  KA ++E +    E++    + P   A++ MI   C+ G
Sbjct: 437 ELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKG 496

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +AN +     + G SP+ ITYS L+ G+ +  ++++V++L + M  K + P    Y 
Sbjct: 497 QVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYA 556

Query: 308 SLISSLCQCGKLEE 321
            +   +C+  K +E
Sbjct: 557 IVEDMVCKDEKYKE 570



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/369 (20%), Positives = 158/369 (42%), Gaps = 41/369 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR------YPNEATIRTLISA 67
           +++ G + +++++ TLI  +      ++  + +Q ML +         PN  +   +I  
Sbjct: 187 MQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDG 246

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK G  +  + + + +  +   P V+  + LI  + +E ++ +   LL+ M++  ++ +
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
              Y+ ++     + +L SA  ++  M  +G+  +   Y   I  YC+  K+EEA  L  
Sbjct: 307 LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFN 366

Query: 188 EMENAGLKPYDETFNLLI-----------------------------------EGCAKAK 212
           EM + G+ P  +T  +L+                                   +G  K  
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNG 426

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
            I E++    ++ S  +      F  +I  LC+ G  + A  +     ++G  P+ + YS
Sbjct: 427 YIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYS 486

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            +I G+ K+G++ +   L+ +ME    SP L  Y+ L+    +  KLE+  +    M   
Sbjct: 487 SMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEK 546

Query: 333 SLVPGVDIY 341
            + P   IY
Sbjct: 547 DVWPDDGIY 555



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 6/256 (2%)

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           M+    +++ ++    K+ +      +Y++M   G   +       I   C   +I E  
Sbjct: 87  MMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGL 146

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             M  +   G  P   TF  LI+G     RI E+     +M      P+   +  +I+ L
Sbjct: 147 AAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGL 206

Query: 244 CECGNA----KQANGMLTLALDKGFS--PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
           C  GN     K    ML       F+  PN I+YS +I G  K G  +E + L+ EM  +
Sbjct: 207 CALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQ 266

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P +  ++ LI  LC+ G++ +A K  ++M    +VP +  Y SL+      G+   A
Sbjct: 267 GVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSA 326

Query: 358 LHLCEEMVSEGLKPST 373
             L   M S+G +P  
Sbjct: 327 KELFVSMPSKGYEPDV 342



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/128 (21%), Positives = 62/128 (48%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T   LI  LCK G+L+T  ++ ++++ +   P  +  +S+I    ++ ++++  +L ++M
Sbjct: 449 TFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKM 508

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
                  D I YS+++    +   LE  + +   M+++    +  +Y       C+  K 
Sbjct: 509 EENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKY 568

Query: 180 EEANCLMQ 187
           +E   L+Q
Sbjct: 569 KEWLDLLQ 576


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 166/363 (45%), Gaps = 15/363 (4%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-------PNEATIRTLISALC 69
           RG +  ++++N L+    K        R Y+  +E I         PN  T   L+  +C
Sbjct: 196 RGCAPDVVTYNILLEATCKG-------RGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G +   +++L  +    C P  +   +++  +   ER  +   L+  MLR+N   +  
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEA 308

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            +++++Y+  +   L+ A+ + E+M K G +AN   Y   I   CE   ++ A  L+ +M
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           ++ G KP   T+N L++G   A +  ++    + M     LP    FN +I  LC+ G  
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 428

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +     DKG +PN ITYS +I G AK  ++ + L+L+ EM +K  +P    Y  L
Sbjct: 429 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLL 487

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
              L     +EEA +  + ++   + P   +Y +++      G    A+ +   MVS G 
Sbjct: 488 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 547

Query: 370 KPS 372
            P 
Sbjct: 548 MPD 550



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 141/310 (45%), Gaps = 3/310 (0%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L    C+ G+L    D    + G    P       LI  + +  ++ + + +L  ML + 
Sbjct: 141 LTDGYCRAGRLG---DARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRG 197

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y++++ A  K R    A+ + + M   G + N+  Y   +   C  G +++A 
Sbjct: 198 CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDAL 257

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ + + G KP    +N +++G   A+R  ++     +M+     P+ + FN +I  L
Sbjct: 258 ELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 317

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G  +QA  +L      G + N +TY+ +I G  ++  +   + L  +M+     P +
Sbjct: 318 CRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDI 377

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +L+  LC   +  +A++    M  +  +P    + +L+G   +KG    A+ + ++
Sbjct: 378 VTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 437

Query: 364 MVSEGLKPST 373
           M  +G  P++
Sbjct: 438 MPDKGCTPNS 447



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 158/368 (42%), Gaps = 5/368 (1%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R +   G + +++++  L     ++ R     R+   M      PN  T   LI  L
Sbjct: 121 DAERVVGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQ---PNAYTYNPLIHTL 177

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ GQ++  + +LD +  + C+P V+    L+    +     + M L+  M  +    + 
Sbjct: 178 CERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNN 237

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y++++       +++ AL +   +   G   ++  Y T +   C   +  +A+ L+ E
Sbjct: 238 VTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTE 297

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M      P + TFN++I    +   +++++   E+M       +   +N +I  LCE  N
Sbjct: 298 MLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN 357

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A G+L+     G  P+ +TY+ L+ G     +  +  +L   M      P    + +
Sbjct: 358 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT 417

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSE 367
           LI  LCQ G + +A + FK M      P    Y +++   L K  K  +AL L  EM  +
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIIS-GLAKATKLDQALELFNEMGHK 476

Query: 368 GLKPSTSY 375
           G  P   Y
Sbjct: 477 GFNPDKIY 484



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 145/330 (43%), Gaps = 36/330 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R L   G   S +++NT++  +  ++R      +   ML     PNEAT   +I 
Sbjct: 256 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 315

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LC+ G LQ  + +L+++    C+  ++   ++I  + ++  ++  M LL +M       
Sbjct: 316 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 375

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++           A  + + M + G   ++  + T IG  C+ G + +A  + 
Sbjct: 376 DIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 435

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G  P   T++ +I G AKA +++++L                 FNEM       
Sbjct: 436 KQMPDKGCTPNSITYSTIISGLAKATKLDQALEL---------------FNEMGH----- 475

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                          KGF+P++I Y  L      +  I+E ++   +++   ISP    Y
Sbjct: 476 ---------------KGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 519

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            +++  LC+ GK E A      M S   +P
Sbjct: 520 NAILLGLCRNGKTEFAIDIMAYMVSSGCMP 549


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 180/412 (43%), Gaps = 38/412 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+  E A  V   LE+ G    + ++N +I    K+DR D   ++   M +    P+  T
Sbjct: 125 MKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVT 183

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI   C  G+L   + ++D++    C P VI  T LI   I +  I+E M LL  ML
Sbjct: 184 YNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEML 243

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESAL-------------------------------- 148
            + +  D   Y+++V    K   L+ A                                 
Sbjct: 244 SRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWE 303

Query: 149 ---VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
               +  +ML +G   N   Y+T I A C  GKI+EA  +++ M+   L P   +++ LI
Sbjct: 304 YGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLI 363

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
               +  +++ ++ + + M+S   LP   ++N ++  LC+ GNA +A  +     + G  
Sbjct: 364 SALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCP 423

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA-DK 324
           PN  +Y+ L G     G+    L +  EM    I P    Y SLIS LC+ G +++A + 
Sbjct: 424 PNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIEL 483

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
              + +S    P V  Y +++    +      A+ +   MV+EG  P+ T+Y
Sbjct: 484 LVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTY 535



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 154/338 (45%), Gaps = 8/338 (2%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +LE    P+      +IS  CK  ++     +LDR+  +   P V+    LI       R
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           ++  + ++ ++L+ N     I Y++++ A +    ++ A+ + +EML RG   + + Y  
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +   C+ G ++ A   +  +   G      T+N+L+       + E    Y E++MS  
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWE----YGEKLMSDM 312

Query: 229 LLPSCS----AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           L+  C      ++ +I  LC  G   +A  +L +  +K  +P+  +Y  LI    +EG++
Sbjct: 313 LVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKV 372

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
              ++   +M      P + +Y S+++SLC+ G  +EA   F+ +      P    Y +L
Sbjct: 373 DLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTL 432

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
            G     G+K +AL +  EM+S G+ P      S  +C
Sbjct: 433 FGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISC 470



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 146/320 (45%), Gaps = 13/320 (4%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + AF+    + + G    + ++N L+  +    + +   ++   ML     PN  T  
Sbjct: 266 MLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYS 325

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ALC+ G++    ++L  +  K  +P       LI  + +E +++  +  L  M+  
Sbjct: 326 TLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISG 385

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + D ++Y+ I+ +  K  N + AL ++E++ + G   N+  Y T  GA    G    A
Sbjct: 386 GHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRA 445

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFNEMIR 241
             ++ EM + G+ P + T+N LI    +   +++++     M  S K  P+  ++N ++ 
Sbjct: 446 LGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLL 505

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG---EIQEVLKLYYEME--- 295
            LC+      A  +L   +++G  PNE TY+ LI G    G   +  E+  L   M+   
Sbjct: 506 GLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNMDAIS 565

Query: 296 ------YKSISPTLPAYTSL 309
                 ++ I P   A+  L
Sbjct: 566 EDSFKRFQKIFPVFDAHKEL 585



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 1/228 (0%)

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + +L   + M+ RG+  +  + T  I  +    KIE+A  +M+ +E  G KP    +N +
Sbjct: 94  DESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAV 152

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  KA R++ +    ++M  R   P    +N +I   C  G    A  ++   L    
Sbjct: 153 ISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNC 212

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  ITY+ LI     +G I E +KL  EM  + + P    Y  +++ +C+ G L+ A +
Sbjct: 213 KPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFE 272

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +   +  +  V GV  Y  L+   L +G       L  +M+ +G +P+
Sbjct: 273 FLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPN 320



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 3/210 (1%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           F   +F+ T  +   C+  K +E+   +Q M N G KP       LI+G    K+IE+++
Sbjct: 75  FRDTNFMKT--LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAI 132

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              E ++ +   P   A+N +I   C+      A+ +L     +GF P+ +TY+ LIG +
Sbjct: 133 QVME-ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNF 191

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
              G +   L++  ++   +  PT+  YT LI +    G ++EA K    M S  L P  
Sbjct: 192 CGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDR 251

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             Y  +V    ++G   +A      +   G
Sbjct: 252 YTYNVVVNGMCKEGMLDRAFEFLSRISKNG 281



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 4/154 (2%)

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           + F + + R C+     ++   L   +++G+ P+ I  + LI G+    +I++ +++   
Sbjct: 78  TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEI 137

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           +E K   P + AY ++IS  C+  +++ A K    MK     P V  Y  L+G    +G 
Sbjct: 138 LE-KHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 354 KAKALHLCEEMVSEGLKPST---SYLCSASTCRG 384
              AL + ++++ +  KP+    + L  A+  +G
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQG 230


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 157/333 (47%), Gaps = 38/333 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG   + +SFNTLI+ + KS   D  +R+ + M EN  YP+  T   LI  LCK G+
Sbjct: 249 IRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML------------- 120
           L     + D +  +   P  I  T+LI    +  R++  M    +ML             
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNT 368

Query: 121 --------------RK--------NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
                         RK         M  D I Y+ ++    K  +LESA+ + + M + G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              ++  +T  I  +C  G++ +A   ++EM  AG+KP D T+ ++I+G  K   ++   
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              ++M      P    +N ++  LC+ G  K AN +L   L+ G +P++ITY+ L+ G+
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            K G+ +++LKL  E   K +      YTSL+S
Sbjct: 549 CKNGKAEDLLKLRNE---KGLIVDYAYYTSLVS 578



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 157/346 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   +  +N LI+   K         I+  + +    P   +  TLI+ LCK   L   
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +   +   R  P V   + LI  + +E R++    L   M ++ +  + I ++ ++  
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
           + + R ++SA+  Y +ML  G   +  +Y T +   C+ G + +A  L+ EM+  G+KP 
Sbjct: 338 QYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPD 397

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  K   +E ++   + M    ++    AF  +I   C  G  + A   L 
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             ++ G  P++ TY+ +I GY K+G ++   KL  EM+     P +  Y  L++ LC+ G
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
           +++ A+   + M +  + P    Y  L+  H + G     L L  E
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 144/281 (51%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V     LI +  +E  I +  ++   + ++ +   T++++ ++    K RNL+    +
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
            + M +     + F Y+  I   C+ G+++ A  L  EM+  GL+P   TF  LI+G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           ++R++ +++   QM++  + P    +N ++  LC+ G+  +A  ++      G  P++IT
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI GY KEG+++  +++   M  + +     A+T+LIS  C+ G++ +A++  + M 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              + P    Y  ++  + +KGN      L +EM   G KP
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%)

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L+ GF P    Y+ LI  + KEG I++   ++ E+  + + PT  ++ +LI+ LC+   L
Sbjct: 215 LEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNL 274

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +E  +  K M+ + + P V  Y  L+    ++G    A  L +EM   GL+P+
Sbjct: 275 DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 178/374 (47%), Gaps = 10/374 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +     + + +E  G + + ++FN LI+   +       + +   +L+    P+  T+ T
Sbjct: 84  YHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNT 143

Query: 64  LISALCKGGQLQTYVDMLDRI-----HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            I   C  GQ+   ++  D++     H  + S   ++N    L  + E R    + LL+R
Sbjct: 144 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLING---LCKVGETR--AALQLLRR 198

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           +  K +  + + Y+ ++    K +++  A  +Y EM+ +  S +   Y+  I  +   GK
Sbjct: 199 VDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGK 258

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +++A  L  +M    +KP   TFN+L++G  K  R++++ +  + MM + + P+ S FN 
Sbjct: 259 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNT 318

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++   C+    K+   +  + + +G  PN +TY  L+ GY    ++ +  K++  M  + 
Sbjct: 319 LVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRG 378

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           ++  + +Y  +I+  C+  K+++A K F  M    ++P V  Y SL+    + G  + A 
Sbjct: 379 VTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAF 438

Query: 359 HLCEEMVSEGLKPS 372
            L  EM   G  P+
Sbjct: 439 QLVNEMHDRGQPPN 452



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 164/349 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   AF V   + + G+   +I+ NT I       +       +  ++    + ++ +  
Sbjct: 118 LIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYG 177

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G+ +  + +L R+ GK      ++  ++I  + +++ + +   L   M+ K
Sbjct: 178 TLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAK 237

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + YS ++     +  L+ A+ ++ +M+      + + +   +  +C+ G++++A
Sbjct: 238 RISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKA 297

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++  M    +KP   TFN L++G  K ++++E  +    MM + + P+   +  ++  
Sbjct: 298 KNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 357

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C      +A  +      +G + N  +Y+ +I G+ K  ++ + +KL+ EM +K I P 
Sbjct: 358 YCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPD 417

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
           +  Y SLI  LC+ GK+  A +    M      P +  Y S++   L K
Sbjct: 418 VVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTK 466



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 150/320 (46%), Gaps = 12/320 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++ +   L+ + +NT+I  ++K    +  + +Y  M+     P+  T   LI 
Sbjct: 192 ALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIR 251

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G+L+  +D+ +++  +   P V     L+    +E R+++   +L  M+ +++  
Sbjct: 252 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP 311

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   ++ +V    K R ++    V+  M+K+G   N   Y + +  YC   ++ +A  + 
Sbjct: 312 NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF 371

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G+     ++N++I G  K K++++++    +M  + ++P    +N +I  LC+ 
Sbjct: 372 NTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKS 431

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  ++    D+G  PN ITY+ ++              L  +++ + I P +   
Sbjct: 432 GKISYAFQLVNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTD 479

Query: 307 TSLISSLCQCGKLEEADKYF 326
           T LI  LCQ GKLE A K F
Sbjct: 480 TILIKGLCQSGKLEAARKVF 499



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 143/295 (48%), Gaps = 20/295 (6%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIH---VVTK-SDRNDLVWRIYQHMLENIRYPNEATIR 62
           AFD+   +  +  S  +++++ LI    +V K  D  DL  ++   +LENI+ P+  T  
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKM---ILENIK-PDVYTFN 282

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G+L+   ++LD +  +   P V    +L+    ++ +++EG  +   M+++
Sbjct: 283 ILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQ 342

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + Y  ++     ++ +  A  ++  M +RG +AN   Y   I  +C+  K+++A
Sbjct: 343 GIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKA 402

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM +  + P   T+N LI+G  K+ +I  +     +M  R   P+   +N ++  
Sbjct: 403 MKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL-- 460

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
                     N +LT   D+G  PN  T + LI G  + G+++   K++ ++  K
Sbjct: 461 ----------NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 128/270 (47%)

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
               ++  + L   +L +N       ++ I+ + VK ++  + L + ++M   G + N  
Sbjct: 45  HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFV 104

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            +   I  +C+ G I  A  ++ ++   G +P   T N  I+G     +I ++L++ +++
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           ++        ++  +I  LC+ G  + A  +L     K    N + Y+ +I G +K+  +
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHV 224

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +   LY EM  K ISP +  Y++LI      GKL++A   F  M   ++ P V  +  L
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 284

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           V    ++G   KA ++ + M+ + +KP+ S
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVS 314



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 153/355 (43%), Gaps = 2/355 (0%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYV 78
           +L+   FN ++  + KS     V  + Q M  E I  PN  T   LI+  C+ G +    
Sbjct: 65  TLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGIN-PNFVTFNILINCFCQLGLIPFAF 123

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
            +L +I      P +I   + I     + +I + +    +++      D ++Y  ++   
Sbjct: 124 SVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGL 183

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K+    +AL +   +  +    N+ +Y T I    +   + +A  L  EM    + P  
Sbjct: 184 CKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDV 243

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T++ LI G     ++++++    +M+   + P    FN ++   C+ G  K+A  +L +
Sbjct: 244 VTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDM 303

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            + +   PN  T++ L+ G+ K+ +++E   ++  M  + I P +  Y SL+   C   +
Sbjct: 304 MMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQ 363

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + +A K F  M    +   V  Y  ++    +     KA+ L  EM  + + P  
Sbjct: 364 VNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDV 418


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 164/335 (48%), Gaps = 1/335 (0%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +LE    P+      +IS  CK  ++++   +LDR+  K  SP V+ +  +I     + +
Sbjct: 35  ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94

Query: 109 IEEGMVLLKRMLRKNMIHDT-IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           I+  + + + +L+ N    T I Y++++ A +    ++ AL + +EML RG   ++F Y 
Sbjct: 95  IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYN 154

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
                 C+ GK++ A   ++ + + G KP   T+N+L+       + +E   +  ++ SR
Sbjct: 155 VITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR 214

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
              P+   ++ +I  LC  G  +++  ++ +  +KG +P+   Y  LI  + +EG++   
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           ++    M      P +  Y +++++LC+ G  + A + F  +      P V  Y +++  
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
               G++ +AL +  +M+S+G+ P      S  +C
Sbjct: 335 LWSSGDRYRALGMISQMLSKGIDPDVITYNSLISC 369



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/374 (22%), Positives = 171/374 (45%), Gaps = 4/374 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATIRT 63
           E A  V   ++++GFS  +++ N +I       + DL  ++++ +L +N   P   T   
Sbjct: 61  ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A    G +   + +LD +  +   P       +   + +E +++     ++ +  + 
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++++ A +     +       E+  RG   N   Y+  I + C  GKIEE+ 
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESV 240

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ M+  GL P    ++ LI    +  +++ ++ + + M+    LP    +N ++  L
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAAL 300

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ GN   A  +     + G  PN  +Y+ ++      G+    L +  +M  K I P +
Sbjct: 301 CKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDV 360

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCE 362
             Y SLIS LC+ G ++EA      M S    P +  Y++++ + L K ++   A+ +  
Sbjct: 361 ITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVL-LGLCKAHRIDDAIEVLA 419

Query: 363 EMVSEGLKPS-TSY 375
            M+  G +P+ T+Y
Sbjct: 420 AMIENGCQPNETTY 433



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 160/372 (43%), Gaps = 2/372 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A  V   LE+ G    + ++N +I    K++R +    +   M      P+  T 
Sbjct: 24  RNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTH 82

Query: 62  RTLISALCKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +I   C  G++   + + + +     C P +I  T LI   I E  I+E + LL  ML
Sbjct: 83  NIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEML 142

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  DT  Y++I     K   ++ A      +  RG   +   Y   + A    GK +
Sbjct: 143 SRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWD 202

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E    M E+ + G +P   T+++LI    +  +IEES++  + M  + L P    ++ +I
Sbjct: 203 EGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 262

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C  G    A   L   +  GF P+ + Y+ ++    K G     ++++ +++     
Sbjct: 263 AAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCP 322

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P + +Y +++S+L   G    A      M S  + P V  Y SL+      G   +A+ L
Sbjct: 323 PNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGL 382

Query: 361 CEEMVSEGLKPS 372
             +M+S   +P+
Sbjct: 383 LADMLSGRFQPN 394



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/344 (21%), Positives = 159/344 (46%), Gaps = 2/344 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +LI++  LI         D   ++   ML     P+  T   +   LCK G++    + +
Sbjct: 114 TLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFV 173

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             ++ + C P VI    L+  ++ + + +EG   +  +  +    + + YS+++ +  + 
Sbjct: 174 RTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRD 233

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +E ++ + + M ++G + +++ Y   I A+C  GK++ A   +  M   G  P    +
Sbjct: 234 GKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNY 293

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N ++    K    + ++    ++      P+ S++N M+  L   G+  +A GM++  L 
Sbjct: 294 NTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLS 353

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P+ ITY+ LI    ++G + E + L  +M      P + +Y +++  LC+  ++++
Sbjct: 354 KGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDD 413

Query: 322 ADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEM 364
           A +    M  +   P    Y  L+ GI    G++ +A+ L   +
Sbjct: 414 AIEVLAAMIENGCQPNETTYTLLIEGIGFS-GSRTQAMELANSL 456



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 130/307 (42%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG      ++N +   + K  + D  +   + +      P+  T   L+ AL   G+  
Sbjct: 143 SRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWD 202

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                +  I  + C P V+  + LI  + ++ +IEE + L+K M  K +  D   Y  ++
Sbjct: 203 EGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 262

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A  +   L+ A+   + M+  GF  +   Y T + A C+ G  + A  +  +++  G  
Sbjct: 263 AAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCP 322

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N ++     +     +L    QM+S+ + P    +N +I  LC  G   +A G+
Sbjct: 323 PNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGL 382

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   L   F PN ++Y  ++ G  K   I + +++   M      P    YT LI  +  
Sbjct: 383 LADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGF 442

Query: 316 CGKLEEA 322
            G   +A
Sbjct: 443 SGSRTQA 449



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 137/307 (44%), Gaps = 9/307 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+  R L  RG    +I++N L+  +    + D   +    +      PN  T   LIS
Sbjct: 169 AFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILIS 228

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LC+ G+++  V+++  +  K  +P       LI    +E +++  +  L  M+    + 
Sbjct: 229 SLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLP 288

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ I+ A  K  N + A+ ++ ++ + G   N   Y T + A    G    A  ++
Sbjct: 289 DIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMI 348

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M + G+ P   T+N LI    +   ++E++     M+S +  P+  ++  ++  LC+ 
Sbjct: 349 SQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKA 408

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL---------YYEMEYK 297
                A  +L   ++ G  PNE TY+ LI G    G   + ++L           E  +K
Sbjct: 409 HRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSFK 468

Query: 298 SISPTLP 304
            ++ T P
Sbjct: 469 RLNKTFP 475



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 94/203 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E + ++ + ++++G +     ++ LI    +  + D+       M+ +   P+     T+
Sbjct: 237 EESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTI 296

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++ALCK G     V++  ++    C P V    +++  +         + ++ +ML K +
Sbjct: 297 MAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGI 356

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I Y+ ++    +   ++ A+ +  +ML   F  N   Y T +   C+  +I++A  
Sbjct: 357 DPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIE 416

Query: 185 LMQEMENAGLKPYDETFNLLIEG 207
           ++  M   G +P + T+ LLIEG
Sbjct: 417 VLAAMIENGCQPNETTYTLLIEG 439


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 167/395 (42%), Gaps = 46/395 (11%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L  +N LI+    +     VW +Y  ML     PN  T   L+ A CK G L   +D++
Sbjct: 10  TLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLI 69

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT------------- 128
             +        V  NT+ I    Q+    +G   L  M++K+   D+             
Sbjct: 70  RNVDID--VDTVTYNTA-IWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRI 126

Query: 129 ------------------------------IAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
                                         + Y+ ++ A  K   L  AL +YEEM+  G
Sbjct: 127 GSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDG 186

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           F  +   Y++ I   C+ G + EA  L++EM+  G+ P    + +L++   KA    ES 
Sbjct: 187 FLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESF 246

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            Y  QM+   +         +I  L + G + +A  M          PN ITY+ +I GY
Sbjct: 247 IYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGY 306

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K G++     L  +ME K + P +  Y+S+I+   + G L+ A +  K M   +++P  
Sbjct: 307 CKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNA 366

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            IY +L+  HL+ G +  A+ L  EM   GL+ ++
Sbjct: 367 YIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENS 401



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 183/432 (42%), Gaps = 69/432 (15%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +E++    ++++++++I+  TK    D+  RI + ML+    PN     TLI    K 
Sbjct: 320 RDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKA 379

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+    VD+ + +          +  + I  + +  ++EE   L K M+ K ++ D + Y
Sbjct: 380 GKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNY 439

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRG--------------------------------- 158
           + ++    K     +A  + E+M + G                                 
Sbjct: 440 TSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVYSGIREL 499

Query: 159 -FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
             + +   Y T I AYC+ GK+E A  L  EM+   + P   T N+L+ G +KA   E +
Sbjct: 500 GLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERA 559

Query: 218 LSYCEQMM----------SRKLLPSCS-------------------------AFNEMIRR 242
           +    +M+           R LL +CS                          +N +I  
Sbjct: 560 IDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITV 619

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G  K+A  +L     +G S + +TY+ LI G+ K   I++ L  Y +M  + +SP 
Sbjct: 620 LCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPG 679

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y  L+  L   G + +A +    MK   L P   +Y +L+  H + GNK +A+    
Sbjct: 680 IRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYC 739

Query: 363 EMVSEGLKPSTS 374
           EMV++GL P TS
Sbjct: 740 EMVTKGLVPKTS 751



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 157/339 (46%), Gaps = 1/339 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + + G    ++++N LI+ + +  + D    +Y  + E    P+ AT  T+I+
Sbjct: 455 AFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMIN 513

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G+L+  + + + + G    P  I    L+  + +    E  + +L  ML   +  
Sbjct: 514 AYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP 573

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   +  ++ A  K    ++ L +++ ++  G  AN  VY + I   C  G  + A  ++
Sbjct: 574 NVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVL 633

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G+     T+N LI G  K+  IE++L+   QM++  + P    +N ++  L   
Sbjct: 634 NNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAA 693

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L+   D G  P+   Y+ LI G+ K G  +E +K Y EM  K + P    Y
Sbjct: 694 GLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTY 753

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             LI    + GK+++A +    M+   + P    Y+ L+
Sbjct: 754 NVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILI 792



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 146/312 (46%), Gaps = 1/312 (0%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI  L K G+      M   +    C P  I  T++I    +   ++    LL+ M +K
Sbjct: 266 TLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKK 325

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ + + YS I+    K   L+ A+ + ++ML +    N+++Y T I  + + GK + A
Sbjct: 326 QVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAA 385

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM+  GL+      +  I    + +++EE+   C+ MMS+ LL     +  ++  
Sbjct: 386 VDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDG 445

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + G    A  M     + G   + + Y+ LI G  + G+  +   +Y  +    ++P 
Sbjct: 446 FFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGK-YDAESVYSGIRELGLAPD 504

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y ++I++ C+ GKLE A K +  MK HS++P       LVG   + G   +A+ +  
Sbjct: 505 RATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLN 564

Query: 363 EMVSEGLKPSTS 374
           EM+  G+ P+ +
Sbjct: 565 EMLLWGICPNVT 576



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 143/314 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G +    ++NT+I+   K  + +   +++  M  +   PN  T   L+  L K G+
Sbjct: 496 IRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGE 555

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +  +D+L+ +      P V ++ +L+    + ER +  + + KR++   +  +   Y+ 
Sbjct: 556 TERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNS 615

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +   + A +V   M K G SA++  Y   I  + +   IE+A     +M N G
Sbjct: 616 LITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEG 675

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+NLL+ G   A  + ++     +M    L P  S +N +I    + GN K+A 
Sbjct: 676 VSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAI 735

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 + KG  P   TY+ LI  +AK G++ +  +L  EM+ + + P    Y  LI   
Sbjct: 736 KFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGW 795

Query: 314 CQCGKLEEADKYFK 327
           C   K  E D+  K
Sbjct: 796 CNLSKQPELDRISK 809



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 165/394 (41%), Gaps = 42/394 (10%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S  L+   TLI  + K+ ++D    ++  + +    PN  T   +I   CK G +   
Sbjct: 256 GVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGA 315

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  K+  P V+  +S+I    ++  ++  + ++K+ML +N++ +   Y+ ++  
Sbjct: 316 ESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDG 375

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFV-------------------------------- 165
            +K    ++A+ +Y EM   G   NSF+                                
Sbjct: 376 HLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLD 435

Query: 166 ---YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              YT+ +  + + G+   A  + ++M   G+K     +N+LI G  +  + +    Y  
Sbjct: 436 RVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVY-S 494

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            +    L P  + +N MI   C+ G  + A  +          PN IT + L+GG +K G
Sbjct: 495 GIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAG 554

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK---SHSLVPGVD 339
           E +  + +  EM    I P +  + +L+++   C K E AD   ++ K      L    +
Sbjct: 555 ETERAIDVLNEMLLWGICPNVTIHRALLNA---CSKCERADTILQMHKRLVGMGLKANRE 611

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +Y SL+ +    G   +A  +   M  EG+   T
Sbjct: 612 VYNSLITVLCGLGMTKRATLVLNNMTKEGISADT 645



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 145/315 (46%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T  TLISA CK   L   + + + +      P V+  +S+I  + +   + E   L
Sbjct: 154 PNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKAL 213

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ M +  +  + + Y+++V +  K  +   + +   +M+  G S +  V TT I    +
Sbjct: 214 LREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFK 273

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK +EA  +   +      P + T+  +I+G  K   ++ + S    M  ++++P+   
Sbjct: 274 AGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVT 333

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++ +I    + G    A  ++   LD+   PN   Y+ LI G+ K G+    + LY EM+
Sbjct: 334 YSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMK 393

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              +        + I++L +  K+EEA+   K M S  L+     Y SL+    + G ++
Sbjct: 394 LNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRES 453

Query: 356 KALHLCEEMVSEGLK 370
            A  + E+M   G+K
Sbjct: 454 AAFTMAEKMAETGIK 468



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 165/378 (43%), Gaps = 13/378 (3%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M    +A D+ R ++     +  +++NT I    +    +  +     M++   + +  T
Sbjct: 59  MGHLSLALDLIRNVD---IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFT 115

Query: 61  IRTLISALCKGGQLQ--TYV------DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEG 112
              L+   C+ G ++   +V      DM D        P ++  T+LI    ++  + E 
Sbjct: 116 CNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEA 175

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           + L + M+    + D + YS I+    K   L  A  +  EM K G + N  VY   + +
Sbjct: 176 LSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDS 235

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
             + G   E+     +M   G+         LI+G  KA + +E+ +    +     +P+
Sbjct: 236 LFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPN 295

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  MI   C+ G+   A  +L     K   PN +TYS +I GY K+G +   +++  
Sbjct: 296 NITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMK 355

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +M  ++I P    Y +LI    + GK + A   +  MK + L     I ++ +  +L++G
Sbjct: 356 KMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFIN-NLKRG 414

Query: 353 NKA-KALHLCEEMVSEGL 369
            K  +A  LC+ M+S+GL
Sbjct: 415 RKMEEAEGLCKYMMSKGL 432



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/302 (20%), Positives = 129/302 (42%), Gaps = 12/302 (3%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A DV   +   G   ++     L++  +K +R D + ++++ ++      N     +L
Sbjct: 557 ERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSL 616

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LC  G  +    +L+ +  +  S   +   +LI    +   IE+ +    +ML + +
Sbjct: 617 ITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGV 676

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
                 Y+L++   +    +  A  +  +M   G   ++ +Y T I  + + G  +EA  
Sbjct: 677 SPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIK 736

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
              EM   GL P   T+N+LIE  AK  +++++     +M  R++ P+ S ++ +I   C
Sbjct: 737 FYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWC 796

Query: 245 ECGNA------------KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
                             +A  +     +KGF P E T + +   +A+ G + +   +  
Sbjct: 797 NLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLK 856

Query: 293 EM 294
           +M
Sbjct: 857 DM 858


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 35/403 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   +  R L +RG    ++  N ++  +   ++  +    +  M+ +   PN  T  TL
Sbjct: 222 EKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTL 281

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+  CK  +L     + + +  K   P +++ + LI  + +  ++EEG  L    L + +
Sbjct: 282 INVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGV 341

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + +S I+ A V++ +L  A+ VY  MLK G S N   Y+  I   C  G++ EA  
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  ++   GL+P   T++ LI+G  K++ + +       M+ +  +P     + +I  L 
Sbjct: 402 VFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLS 461

Query: 245 ECGNAKQANGMLTLALDKGFS-----------------------------------PNEI 269
             G   +A      A+ +G +                                   P+ +
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV 521

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ L+ G A++G + E L L++++  K  SP    Y +LI   C+        + FK+M
Sbjct: 522 TYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLM 581

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +S+ + P + IY  L+ +   +G     L L  E++  GL+P 
Sbjct: 582 QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/402 (21%), Positives = 177/402 (44%), Gaps = 30/402 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM----------------- 49
           A D   ++ + G S+S  + + ++ ++  SDR D++   Y+ M                 
Sbjct: 159 AVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKR 218

Query: 50  -------------LENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN 96
                        +E    P       ++  LC G Q+    D  D +     SP ++  
Sbjct: 219 GEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTF 278

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           ++LI    +E R++E   L   M+ K ++ D + YS+++    +   LE    ++   L 
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALA 338

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           RG   +  ++++ + AY   G + +A  +   M   G+ P   T+++LI G  +  R+ E
Sbjct: 339 RGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLE 398

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +     Q++ + L PS   ++ +I   C+  N +   G+  + L KG  P+ +  S LI 
Sbjct: 399 ACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G +++G + E L+ +++   + ++     + +LI    +  +  +  K + +M  + ++P
Sbjct: 459 GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP 518

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            V  Y  LV    E+G   +AL L  +++ +G  P     C+
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 174/392 (44%), Gaps = 35/392 (8%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   S++++++LI    KS+     + +Y  ML     P+      LI+ L + G + 
Sbjct: 408 KQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +    +   +  +    +  +LI    + +R  +G+ +   M    +I D + Y+++V
Sbjct: 468 EALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLV 527

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY------------------- 176
               +   L+ AL ++ ++LK+GFS +  +Y T I  +C+                    
Sbjct: 528 KGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587

Query: 177 ----------------GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
                           G +E    L++E+   GL+P   T+N +I G    K   +++  
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            E +   +  P+   F  +I   C+ G    A  + +  L++G  PN +TYS LI GY K
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFK 707

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
               +   +LY +M    +SP + +Y+ LI  LC+ G +EEA   F+      L+P V  
Sbjct: 708 TENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIA 767

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           Y  L+  + + G  A+A+ L + M+  G+ P 
Sbjct: 768 YGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/391 (21%), Positives = 161/391 (41%), Gaps = 35/391 (8%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  + ++ F++++    +         +Y  ML+    PN  T   LI+ LC+ G++  
Sbjct: 339 RGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLE 398

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +  +I  +   P V+  +SLI    + E + +G  L   MLRK  + D +  S+++ 
Sbjct: 399 ACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFV------------------------------- 165
              +   ++ AL  + + +KRG + N+++                               
Sbjct: 459 GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP 518

Query: 166 ----YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
               YT  +    E G+++EA  L  ++   G  P    +  LI+G  K +     L   
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + M S  + P    +N +I      G  +    +L   +  G  P+ +TY+ +I GY   
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSL 638

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
               + +KL+  ++     P    +T LI + C+ G++++A   F  M      P +  Y
Sbjct: 639 KIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTY 698

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L+  + +  N   A  L E+M+ + + P+
Sbjct: 699 SCLIDGYFKTENTESAFELYEKMLGDRVSPN 729



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 178/443 (40%), Gaps = 71/443 (16%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA D    + + G S +L++F+TLI+V  K  R D  + +Y  M+E    P+      LI
Sbjct: 258 VASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILI 317

Query: 66  SALCKGGQLQ--------------------------TYVDMLD---------RIHGKRCS 90
           + L + G+L+                           YV + D         R+  +  S
Sbjct: 318 NGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGIS 377

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+  + LI  + +  R+ E   +  ++L++ +    + YS ++    K  NL     +
Sbjct: 378 PNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGL 437

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           Y  ML++G   +  V +  I      G ++EA     +    GL   +  FN LI+GC +
Sbjct: 438 YGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR 497

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
            KR  + L     M   K++P    +  +++ L E G   +A  +    L KGFSP+ I 
Sbjct: 498 LKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHII 557

Query: 271 YSHLIGGYAK-----------------------------------EGEIQEVLKLYYEME 295
           Y  LI G+ K                                   EG ++ VL+L  E+ 
Sbjct: 558 YCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREII 617

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P +  Y ++I   C      +A K F+++K     P    +  L+  + + G   
Sbjct: 618 KYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMD 677

Query: 356 KALHLCEEMVSEGLKPST-SYLC 377
            A+ +   M+  G +P+  +Y C
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSC 700



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/365 (21%), Positives = 153/365 (41%), Gaps = 21/365 (5%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY---------------PNEATIRT-LISAL 68
           SF  + HV+ +    D   R++  M+                     N +T+ + L+   
Sbjct: 91  SFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCY 150

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G +   VD    +     S      + ++  +I  +RI+   V+L+    + M    
Sbjct: 151 CRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRID---VILENY--EEMCKGL 205

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
             Y  +  + +K   +E  L  +  +++RG           +   C   +I  A+     
Sbjct: 206 GVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M  +G  P   TF+ LI    K  R++E+ S    M+ + ++P    ++ +I  L   G 
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            ++ N + ++AL +G   + + +S ++  Y + G++ + +++Y  M  + ISP +  Y+ 
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI+ LC+ G++ EA   F  +    L P V  Y SL+    +  N      L   M+ +G
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 369 LKPST 373
             P  
Sbjct: 446 HVPDV 450



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 6/229 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY---PNEATIRT 63
              + + ++  G    +  +N LI++     R   V  + + + E I+Y   P+  T  T
Sbjct: 574 GLQIFKLMQSNGIFPDICIYNVLINMFF---REGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C        + + + +   R  P  I  T LI    ++ R+++ M++   ML + 
Sbjct: 631 MICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + YS ++    K  N ESA  +YE+ML    S N   Y+  I   C+ G +EEA+
Sbjct: 691 PEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEAS 750

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
              Q      L P    + +LI G  K  R+ E++   + M+   ++P 
Sbjct: 751 LAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 116/256 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L ++GFS   I + TLI    K        +I++ M  N  +P+      LI+   + G 
Sbjct: 546 LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGC 605

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +++L  I      P ++   ++I      +   + + L + +       + I +++
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K   ++ A++++  ML+RG   N   Y+  I  Y +    E A  L ++M    
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++++LI+G  K   +EE+    +  + R LLP   A+  +IR  C+ G   +A 
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 254 GMLTLALDKGFSPNEI 269
            +    L  G  P+++
Sbjct: 786 MLYDHMLVNGIMPDDL 801



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 6/166 (3%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I+F  LI    K  R D    I+  MLE    PN  T   LI    K    ++  ++ ++
Sbjct: 661 ITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEK 720

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + G R SP ++  + LI  + ++  +EE  +  +  + ++++ D IAY +++    K+  
Sbjct: 721 MLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGR 780

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG--KIEEANCLMQ 187
           L  A+++Y+ ML  G   +  +      A  EYG    +  NC++ 
Sbjct: 781 LAEAMMLYDHMLVNGIMPDDLLQK----ALAEYGFQDSQAKNCVLN 822


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR                +I  + K     LVW  Y+  LE   YP       
Sbjct: 97  FRVPFDTCR---------------KVIEHLMKLKYFKLVWGFYEESLE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G+++    + D I      P V+                            
Sbjct: 141 ILMHXFCKEGEIRLAQSVFDSITKWGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +++ ++   +K+ +L+    +   M   G   + + Y+  I   C+  K+++A
Sbjct: 173 -------SFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM B GL P   TF  LI+G  K  R++ ++    QM+S+ LLP    +N +I  
Sbjct: 226 NELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA+ ++     KG  P++ITY+ LI G  KEG+++   +    M  ++I   
Sbjct: 286 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P +  Y  ++    +KG+      L +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLK 405

Query: 363 EMVSEGLKPS 372
           EM   G  P+
Sbjct: 406 EMQRXGYVPN 415



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    D  +R+   M  +  +P+  T
Sbjct: 152 IRLAQSVFDS---ITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + ++ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            ++++ D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ PN +T
Sbjct: 389 NEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L  K    ++ +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDXYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   +IE   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVIEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++   C+ G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ +  +M+S+ L P 
Sbjct: 257 VDLAMEIYRQMLSQSLLPD 275


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 158/347 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   + ++N L+H + K         +   M      PN  T   L++ LCK G L+  
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  +  +   ++   LI  + ++E++   + LL  M  K    D   Y+ ++Y 
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A  ++  ML  G  AN+  Y T I A    G  ++A  L+ +M   G    
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI+   K   IE+ L   EQM+   L     + N MI  LC+ G    A   L 
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
            A+++GF P+ +TY+ ++ G  K G I+E L L+  ++ + + P    Y + IS  C+ G
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEG 684

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + +A  +F     +  VP    +  LV   L++ N+     + +E+
Sbjct: 685 MVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 169/358 (47%), Gaps = 5/358 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGF    +++  L+H + +  + +   +I    L  I  PN A + TLI+     GQL+ 
Sbjct: 317 RGFYPDNMTYGFLLHGLCRIGKLNEARKI----LIKIPCPNNAILNTLINGYVMSGQLKE 372

Query: 77  YVDMLDR-IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               L+  +      P +     L+  + +E  +     L+  M R+    + I Y+++V
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILV 432

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   LE A +V  EM  RG + NS +Y   I A C   K+  A  L+ EM   G K
Sbjct: 433 NGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCK 492

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  K  RI+E+      M+    + +   +N +I  L   G  ++A  +
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTL 552

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   L +G + ++ITY+ LI  + K G I++ L+LY +M    +     +   +I+ LC+
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK++ A ++ +   +   VP +  Y S++    + G   +AL+L + +  EG++P  
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 140/318 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   L+  LCK G L    D+++ +  + C P VI    L+  + +   +EE  ++
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M  + +  +++ Y+ ++ A  +   +  AL +  EM  +G   + F Y + I   C+
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             +I+EA  L   M   G    + T+N LI    +    +++L+    M+ R        
Sbjct: 508 VDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKIT 567

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I+  C+ GN ++   +    +  G   + I+ + +I G  K G++    +   +  
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            +   P +  Y S+++ LC+ G+++EA   F  ++   + P    Y + +    ++G   
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687

Query: 356 KALHLCEEMVSEGLKPST 373
            A       +  G  PS 
Sbjct: 688 DACSFFYRGIENGFVPSN 705



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 172/405 (42%), Gaps = 40/405 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA +V   +  +G S ++ +F  ++  +   +  D    + + M ++   PN    +TL
Sbjct: 200 QVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTL 259

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I AL +  Q+   + +L+ +    C P V     +I  + +  +I +   L+ RML +  
Sbjct: 260 IHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGF 319

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y  +++   ++  L  A     ++L +    N+ +  T I  Y   G+++EA  
Sbjct: 320 YPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQS 375

Query: 185 LMQE-MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + E M N G +P   T+N+L+ G  K   +  +     +M  R   P+   +  ++  L
Sbjct: 376 FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  +L     +G + N + Y+ LI    ++ ++   L L  EM  K   P L
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV------------------ 345
             Y SLI  LC+  +++EA + F  M     V     Y +L+                  
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 346 ----GIHLEK-------------GNKAKALHLCEEMVSEGLKPST 373
               G  L+K             GN  K L L E+M+ +GL   T
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 164/412 (39%), Gaps = 42/412 (10%)

Query: 2   RLFEVAFDVCRYLE-------QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR 54
           +L E+  DV   LE       Q+G+  +   +   I+ +    +  L+ ++   M E   
Sbjct: 84  KLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGI 143

Query: 55  YPNEATIRTLISALCKGGQL-QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE-G 112
              E+    ++    K GQ  Q    +LD      C P    +  L+L I+      +  
Sbjct: 144 VFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEP-TFKSYDLVLEILVTGNCPQVA 202

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
             +   ML K +      + +++ A      ++SA  +  +M K G   NS VY T I A
Sbjct: 203 TNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHA 262

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
             +  ++ EA  L++EM   G  P  +TFN +I G  K  +I ++    ++M+ R   P 
Sbjct: 263 LSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPD 322

Query: 233 CSAFNEMIRRLCECGNAKQA-----------NGMLTLALDK------------------- 262
              +  ++  LC  G   +A           N +L   ++                    
Sbjct: 323 NMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMI 382

Query: 263 --GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             GF P+  TY+ L+ G  KEG +     L  EM  +   P +  Y  L++ LC+ G LE
Sbjct: 383 NFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE 442

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA      M +  L     IY  L+     K     AL+L  EM ++G KP 
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 124/254 (48%), Gaps = 2/254 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            VA ++   +  +G    L ++N+LI+ + K DR D  +R++ +ML +    N  T  TL
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I AL + G  Q  + +++ +  + C+   I    LI    +   IE+G+ L ++M+   +
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DTI+ ++++    K+  +++A     + + RGF  +   Y + +   C+ G+I+EA  
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   ++  G++P   T+N  I    K   + ++ S+  + +    +PS   +N ++  L 
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLL 716

Query: 245 ECGNAKQANGMLTL 258
           +  N  Q N    L
Sbjct: 717 KQSN--QENNFFVL 728



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/221 (17%), Positives = 85/221 (38%), Gaps = 35/221 (15%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  +   +  RG +L  I++N LI    K    +    +Y+ M+ +    +  +   
Sbjct: 546 FQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNI 605

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LCK G                                   +++     L+  + + 
Sbjct: 606 MINGLCKVG-----------------------------------KVDNAFEFLRDAINRG 630

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + D + Y+ ++    K+  ++ AL +++ +   G   ++F Y TFI   C+ G + +A 
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDAC 690

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
                    G  P + T+N+L+    K    E +    +++
Sbjct: 691 SFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 187/405 (46%), Gaps = 37/405 (9%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RLF+    V  Y+E++G  +   S   L+  + +    D   R +  M+E+ ++      
Sbjct: 159 RLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQS 218

Query: 62  RTL-ISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSL---------------ILRII 104
            TL I  LC+ G+++   +++D + GK    P V    +L               IL+++
Sbjct: 219 LTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLM 278

Query: 105 QEER--------------------IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
           ++E+                    IEE   + + M  KN+  D   YS ++    ++ N+
Sbjct: 279 EKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNM 338

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  +++EM +R    N+  Y   IG  C+ G++E A  L+ EM++ G+      FN  
Sbjct: 339 KRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTT 398

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++G  +  +++E+L     M  + +      +N +   LC+     +A  +L   ++KG 
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGV 458

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN +T++  I  Y KEG + E  +L+ +ME K   P +  Y +LI + C+  K+++A K
Sbjct: 459 KPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHK 518

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
               M +  L+P +  Y SL+      G   +AL L  EM  +G+
Sbjct: 519 IKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGI 563



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 160/338 (47%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           ++ + +E+     S+ +++ LI   + S   +   +I++ M E     +     ++IS  
Sbjct: 273 EILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWS 332

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
            + G ++    + D +  +   P      +LI  + +  ++E   +LL  M  K +  + 
Sbjct: 333 RRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNL 392

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + ++  +    +   ++ AL +   M K+G +A+ F Y       C+  + +EA C++  
Sbjct: 393 VIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNS 452

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G+KP   TF + IE   K   + E+      M  +  +P+   +N +I   C+   
Sbjct: 453 MVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEK 512

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            KQA+ + +  ++KG  P+  TYS LI G    G + E LKL+ EM  K I+  +  YTS
Sbjct: 513 VKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTS 572

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
           +IS L + G+ +EA K +  M    L+P   ++ SLVG
Sbjct: 573 MISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVG 610



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 128/269 (47%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           ++  M +    PN  T   LI  +CK GQ++    +L  +  K     +++  + +    
Sbjct: 344 LFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYC 403

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +  +++E + L   M +K +  D   Y+++     K+   + A  +   M+++G   N  
Sbjct: 404 RRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVV 463

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            +T FI  YC+ G + EA  L ++ME  G  P   T+N LI+   K ++++++     +M
Sbjct: 464 TFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEM 523

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +++ LLP    ++ +I   C  G   +A  +      KG + N  TY+ +I G +KEG  
Sbjct: 524 INKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRA 583

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            E  KLY EM    + P    +TSL+ S 
Sbjct: 584 DEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 139/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ +L     +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++   + KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCR-----------------YLEQR---GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR                 + E+    G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++  VL   ML K ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   + E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LDKG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    +  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++     + D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM+ +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEENLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A+  F  M    LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 11/378 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L+ VA +    L+  G+  S +++N L+ V  ++DR D  + +++ M ++    +  T+ 
Sbjct: 212 LWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLG 271

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             +  LCK G+ +  + ++++   K  +   ++ T +I  + +    EE M  L RM   
Sbjct: 272 CFVHLLCKAGRWREALALIEKEEFKLDT---VIYTQMISGLCEASLFEEAMDFLSRMRSS 328

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           + I + + Y +++   ++ R L     +   M+  G   +  ++ + I AYC  G    A
Sbjct: 329 SCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYA 388

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE-------SLSYCEQMMSRKLLPSCSA 235
             L+++M + G +P    +N+LI G    +++           +Y E + +  +L   + 
Sbjct: 389 YKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNV 448

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
            N + R LC  G  ++A  ++   + KGF P+  TYS +IG      ++     L+ EM+
Sbjct: 449 SN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P +  YT LI S C+ G L++A K+F  M      P V  Y +L+  +L+    +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 356 KALHLCEEMVSEGLKPST 373
            A  L E M+SEG  P+ 
Sbjct: 568 SANELFEMMLSEGCIPNV 585



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 162/378 (42%), Gaps = 51/378 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ + R +  +GF     +++ +I ++  + + D  + +++ M  N   P+  T   
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G LQ      D +    C+P V+  T+LI   ++  ++     L + ML + 
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVY-------------------------------- 151
            I + + Y+ ++    K   +E A  +Y                                
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 152 -------------------EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
                              + M   G   N  VY   I  +C+ GK++EA  +  +M   
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P   T++ LI+   K KR++ +L    +M+     P+   + EMI  LC+ G   +A
Sbjct: 701 GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++++  +KG  PN +TY+ +I G+ K G++ + L+L  +M  K  +P    Y  LI+ 
Sbjct: 761 YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINH 820

Query: 313 LCQCGKLEEADKYFKIMK 330
            C  G L++A +    MK
Sbjct: 821 CCAAGLLDDAHQLLDEMK 838



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 164/381 (43%), Gaps = 48/381 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A+ V R +   GF++   +    +H++ K+ R    WR    ++E   +  +  I T
Sbjct: 248 LDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR----WREALALIEKEEFKLDTVIYT 303

Query: 64  -LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEER--------IEE 111
            +IS LC+    +  +D L R+    C P V+    L+   LR  Q  R        I E
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE 363

Query: 112 GMVLLKRMLRKNMIHD-------TIAYSL-------------IVYAKV-----------K 140
           G    +R+   ++IH        + AY L             +VY  +            
Sbjct: 364 GCYPSRRIF-NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS 422

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           +  LE A   Y EML      N    +      C  GK E+A  +++EM + G  P   T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I     A +++ +    E+M S  ++P    +  +I   C+ G  +QA       +
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G +PN +TY+ LI  Y K  ++    +L+  M  +   P +  YT+LI   C+ G++E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 321 EADKYFKIMKSHSLVPGVDIY 341
           +A + +  M+ ++ +P VD+Y
Sbjct: 603 KACQIYARMRGNADIPDVDMY 623



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 14/323 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +   G   + I ++ LI    K  + D    ++  M E    PN  T  +LI 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  +L   + +L R+    C+P VI+ T +I  + +  + +E   L+  M  K    
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K   ++  L +  +M  +G + N   Y   I   C  G +++A+ L+
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM+      +   +  +IEG  +   I  SL   +++     +P   A+  +I   C+ 
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKA 892

Query: 247 GNAKQANGMLTLALDKGFS-------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           G  +     L L L K  S        ++  YS LI   +   ++ +  +LY +M  +  
Sbjct: 893 GRLE-----LALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947

Query: 300 SPTLPAYTSLISSLCQCGKLEEA 322
            P L  +  L+  L +  + EEA
Sbjct: 948 IPELSIFFYLVKGLIRINRWEEA 970



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 139/349 (39%), Gaps = 45/349 (12%)

Query: 44  RIYQHMLENIRYPNEATIRTLISAL----CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           R+ +  L  IR  ++  +  L++ L    C+ G     ++ L R+      P  +   +L
Sbjct: 179 RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNAL 238

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +   ++ +R++   ++ + M       D       V+   K      AL + E   K  F
Sbjct: 239 VRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEF 295

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             ++ +YT  I   CE    EEA   +  M ++   P   T+ +L+ GC + +++     
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
               M++    PS   FN +I   C  G+   A  +L    D G  P  + Y+ LIGG  
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK-YFKIMKSHSLVPGV 338
              ++                P+L               LE A+K Y +++ +H ++  V
Sbjct: 416 GNEKL----------------PSLDV-------------LELAEKAYGEMLDAHVVLNKV 446

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS-------YLCSAS 380
           ++  +L       G   KA  +  EM+S+G  P TS        LC+AS
Sbjct: 447 NV-SNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494


>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 903

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 2/379 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R + +RG    +IS+NT+I    K    D    + + M E    P+  T  + I+
Sbjct: 476 ALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIA 535

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           AL   G+    V ++  +     +   I  +S +  +    R E+ + LL+ M    +  
Sbjct: 536 ALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSP 595

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             I Y+  + A  +    + AL++  EM   G + N F Y+  I A  + G+ E+   L+
Sbjct: 596 TVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALL 655

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   GL P +  +   I GC    + E +++    M++  + P+   +   +  L  C
Sbjct: 656 NEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHC 715

Query: 247 GNAKQANGMLT-LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
           G    A  +L+ +  + G  PNE TY+ +I      G+   V ++  +M    I+P L  
Sbjct: 716 GEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTG 775

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y S I +  +CG   EA      M++  + P V  Y + +    + G   +AL L +EM 
Sbjct: 776 YLSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMP 835

Query: 366 SEGLKPSTSYLCSA-STCR 383
            +GL   +  L +A S C+
Sbjct: 836 GKGLVRDSGTLSAAISACQ 854



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 163/390 (41%), Gaps = 27/390 (6%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ R + + G    +ISF T I        ++    I++ M      PN  T   +
Sbjct: 353 EKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAV 412

Query: 65  ISALCKGGQLQTYVDMLDRIH---------------------GKRCSPMVIVNTSLILRI 103
           +SA    GQ +  +D    +                         CS     NT+L    
Sbjct: 413 MSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACS----YNTALSACE 468

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + E+     + LL+ M ++ +    I+Y+ ++ A  K    + AL +  EM +RG   + 
Sbjct: 469 VGEQ-WGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDV 527

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             + + I A    G+ ++A  LM+EM  AG+     T++  + G A A R E++LS   +
Sbjct: 528 ITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLRE 587

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M    + P+   +   IR   E G   +A  +L      G +PN  +YS  I    K+G 
Sbjct: 588 MQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGR 647

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
            ++ L L  EM    ++P    YT+ I+     G+ E A   F+ M +  + P V  Y S
Sbjct: 648 WEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTS 707

Query: 344 LVGIHLEKGNKAKALHLCEEMVSE-GLKPS 372
            V      G    AL L  EM  E G++P+
Sbjct: 708 AVSALAHCGEVDLALELLSEMKEEAGIEPN 737



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 147/334 (44%), Gaps = 18/334 (5%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   +++A  K GQ +  +++   +      P VI  T+ I         EE + +
Sbjct: 334 PDVVTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSI 393

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFS--------------- 160
            + M R  +  + I ++ ++ A +     E AL  + E++    +               
Sbjct: 394 FREMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVE 453

Query: 161 -ANSFVYTTFIGAYCEYG-KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            A++  Y T + A CE G +   A  L+++M   G+KP   ++N +I  C K    +++L
Sbjct: 454 VADACSYNTALSA-CEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQAL 512

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           +   +M  R L+P    FN  I  L   G    A  ++      G + + ITYS  + G 
Sbjct: 513 ALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGL 572

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           A  G  ++ L L  EM+   +SPT+  YT+ I +  + GK +EA    + M +  + P +
Sbjct: 573 AHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNL 632

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y + +    + G   + L L  EM + GL P+
Sbjct: 633 FSYSATISACGKDGRWEQGLALLNEMPALGLTPN 666



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 163/406 (40%), Gaps = 58/406 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R + +RG    +I+FN+ I  ++ S R D   R+ + M       +  T  + ++
Sbjct: 511 ALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALT 570

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L   G+ +  + +L  + G   SP VI  T+ I    +  + +E ++LL+ M    +  
Sbjct: 571 GLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTP 630

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT------------------- 167
           +  +YS  + A  K    E  L +  EM   G + N F YT                   
Sbjct: 631 NLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATF 690

Query: 168 ----------TFIG--------AYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGC 208
                     T +G        A+C  G+++ A  L+ EM E AG++P ++T+  +I  C
Sbjct: 691 RSMIASGIQPTVVGYTSAVSALAHC--GEVDLALELLSEMKEEAGIEPNEQTYAAVILAC 748

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
               +          M S  + P  + +   IR   ECGN  +A  +L      G  P  
Sbjct: 749 GNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVPPTV 808

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             Y+  I    K G+ QE L L  EM  K +       ++ IS+ CQ        K  + 
Sbjct: 809 SCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAISA-CQ--------KAGRG 859

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +K+  LV      E ++ +  EKG +  +L      V     PST+
Sbjct: 860 VKAAGLV------EEMLEMAREKGGERDSLEGAGAAVP---NPSTA 896



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 120/260 (46%), Gaps = 2/260 (0%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM-LKRGFSANSFVY 166
           R++E + L++      +  D ++Y+  + A V   + E AL +  EM  + G   N   Y
Sbjct: 174 RVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITY 233

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              I      GK +EA  L+ EM++ G+      ++ +     +    + + S   ++  
Sbjct: 234 QAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAASTLREIHD 293

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD-KGFSPNEITYSHLIGGYAKEGEIQ 285
             + P+   +N  I    +CG  ++A  +L    +  G  P+ +TY+ ++    K G+ +
Sbjct: 294 WPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGE 353

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + ++++ EM    I P + ++T+ IS+   CG  EEA   F+ M+   + P +  + +++
Sbjct: 354 KAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVM 413

Query: 346 GIHLEKGNKAKALHLCEEMV 365
              +  G   +AL    E+V
Sbjct: 414 SACIAAGQWEEALDFFTEVV 433



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 107/273 (39%), Gaps = 8/273 (2%)

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMR-----NLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           R    N      A S  VY+K   R         AL +   M + G   NS+     + A
Sbjct: 109 RATTNNAKAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDA 168

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLP 231
             + G+++EA  LM++   +G++    ++N  I  C      E +LS   +M +   + P
Sbjct: 169 CGKAGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKP 228

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +   +   I+    CG A +A  +L    D G       YS +   + +    Q      
Sbjct: 229 NHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAASTL 288

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIYESLVGIHLE 350
            E+    + P +  Y   I +   CG+ EEA      M+    V P V  Y  +V    +
Sbjct: 289 REIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGK 348

Query: 351 KGNKAKALHLCEEMVSEGLKPST-SYLCSASTC 382
            G   KA+ +  EM   G+KP   S+  + S C
Sbjct: 349 AGQGEKAIEIFREMSEVGIKPDVISFTTAISAC 381



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 92/430 (21%), Positives = 151/430 (35%), Gaps = 75/430 (17%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHV-VTKSDRNDLVWRIYQHMLENIRY-----PNEAT 60
           A  + R     G  L ++S+N  I   VT  D     W +   M+  +       PN  T
Sbjct: 178 ALGLMRDARASGIELDVVSYNCAIPACVTGGD-----WELALSMIREMEAEYGIKPNHIT 232

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            +  I    + G+      +L  +        V + TS+   +    R  +        L
Sbjct: 233 YQAAIKVCGRCGKADEAASLLIEMK----DGGVPLKTSVYSAVFNAFRRVDHWQAAASTL 288

Query: 121 RKNMIHD------TIAYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAY 173
           R+  IHD         Y+L +         E AL +   M +  G   +   Y   + A 
Sbjct: 289 RE--IHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAAC 346

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-- 231
            + G+ E+A  + +EM   G+KP   +F   I  C      EE+LS   +M    + P  
Sbjct: 347 GKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNI 406

Query: 232 --------SCSA----------FNEMIRR----------------------------LCE 245
                   +C A          F E++                              L  
Sbjct: 407 ITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSA 466

Query: 246 CGNAKQANGMLTLALD---KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           C   +Q    L+L  D   +G  P  I+Y+ +I    K GE  + L L  EM  + + P 
Sbjct: 467 CEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPD 526

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  + S I++L   G+ ++A +  + M    +      Y S +      G   +AL L  
Sbjct: 527 VITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLR 586

Query: 363 EMVSEGLKPS 372
           EM   G+ P+
Sbjct: 587 EMQGAGVSPT 596


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 186/436 (42%), Gaps = 70/436 (16%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  R +  RGF+ S+ + N L+  + K  +   VW  ++ ML     P+ +T   LI+
Sbjct: 117 ALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILIN 176

Query: 67  ALCKGGQLQ-------------------TY----------------VDMLDRIHGKRCSP 91
            LC  G+L+                   TY                ++++D++  K    
Sbjct: 177 VLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEA 236

Query: 92  MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                  L+  + +  R  +G +LLK+M ++ +  + I Y+ I+   VK   + +A  ++
Sbjct: 237 DACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIF 296

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           +EM       N   Y   I  +C  G  E+A  +++ ME  G KP + +++ L+ G  + 
Sbjct: 297 QEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRH 356

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
            + E S S  E+M    ++  C A+  MI  LC  G   ++  +L   L  G  P+ +T+
Sbjct: 357 AKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTF 416

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI--------------------- 310
           S LI G+ + G+I+ V ++  +M    ++P    YT+LI                     
Sbjct: 417 SVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSR 476

Query: 311 --------------SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
                         SSLC+ GK+  A+ +F  M     VP    ++ ++  +   GN  K
Sbjct: 477 IGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLK 536

Query: 357 ALHLCEEMVSEGLKPS 372
           A  + +EM+  G  PS
Sbjct: 537 AFSMFDEMIKAGHHPS 552



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 156/364 (42%), Gaps = 4/364 (1%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + + +R  S + I++N++I+   K  +     RI+Q M      PN  T   LI   C  
Sbjct: 262 KKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHD 321

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G  +  + +L+ +      P  +  ++L+  + +  + E    +L+RM    MI   IAY
Sbjct: 322 GNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAY 381

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    +   L  ++ + ++MLK G   +   ++  I  +C  GKI+    ++ +M  
Sbjct: 382 TAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYK 441

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           AGL P    +  LI    K   + E+      M       +C   N ++  LC+ G    
Sbjct: 442 AGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGV 501

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A          G  PN IT+  +I GY   G   +   ++ EM      P+   Y  L+ 
Sbjct: 502 AEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLK 561

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVD--IYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +LC+ GK +EA +     K H +   VD   Y +++    + G    A+ L +EMV   +
Sbjct: 562 ALCRAGKFKEAKRLLD--KLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNV 619

Query: 370 KPST 373
            P +
Sbjct: 620 LPDS 623



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 165/367 (44%), Gaps = 1/367 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  +   +E  G   + +S++ L++ + +  + +L   I + M  N           
Sbjct: 324 FEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTA 383

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LC+ G L   V +LD++      P V+  + LI    +  +I+    ++ +M +  
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  ++I Y+ ++Y   K  ++  A  VY  M + G+ AN F+    + + C+ GK+  A 
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAE 503

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
                M   G  P   TF+ +I G   +    ++ S  ++M+     PS   +  +++ L
Sbjct: 504 YFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G  K+A  +L        + + +TY+ ++    K G + + + L+ EM  +++ P  
Sbjct: 564 CRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDS 623

Query: 304 PAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             Y  + + L + GK+  A  ++  ++   ++ P   +Y + V      G    AL+ CE
Sbjct: 624 YTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCE 683

Query: 363 EMVSEGL 369
           +M   GL
Sbjct: 684 DMEKNGL 690



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 166/373 (44%), Gaps = 21/373 (5%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL+E A  + ++L Q G   S   F  L++       N  V+              +  I
Sbjct: 61  RLYENAKSILKHLSQMGVG-SKSVFGALMNTYPLCKSNPSVF--------------DLLI 105

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRC-SPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           R  +     G  L+T+     R+ G R  +P V     L+ ++++E ++    +  K ML
Sbjct: 106 RVYLREGMVGDALETF-----RLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEML 160

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  D   +++++        L+ A  + ++M + G+  +   Y T +  YC+ G+ +
Sbjct: 161 ARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYK 220

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+ +M + G++    T+N+L++   K  R  +     ++M  R + P+   +N +I
Sbjct: 221 AALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSII 280

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
               + G    A  +          PN +TY+ LI G+  +G  ++ L +   ME     
Sbjct: 281 NGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPK 340

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P   +Y++L++ LC+  K E +    + M+ + ++ G   Y +++      G   +++ L
Sbjct: 341 PNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKL 400

Query: 361 CEEMVSEGLKPST 373
            ++M+ +G+ P  
Sbjct: 401 LDKMLKDGVVPDV 413



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 133/302 (44%), Gaps = 16/302 (5%)

Query: 20   SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT--- 76
            S SL ++N L+H   K         +Y  M+    +P++ T  +LI   CK   L     
Sbjct: 727  SPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLK 786

Query: 77   --YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
                 +LD +   +C+        LI++  + + + +   L+  M   ++  D   +  I
Sbjct: 787  LLKKMLLDGVAVDQCTF-----NMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSI 841

Query: 135  VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
            +    ++  ++ + ++  EML+RG   +   Y   +   C  G I  A  L  EME  G+
Sbjct: 842  ISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGI 901

Query: 195  KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
               D   + L+ G AK  ++EE+    + M+ + L+P+ + F  ++   C   +  +A  
Sbjct: 902  SSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEA-- 959

Query: 255  MLTLALDKGFSP---NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             L L     F     + I Y+ LI G   +G++   LKLY E++ + + P +  Y  LI 
Sbjct: 960  -LKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILID 1018

Query: 312  SL 313
            ++
Sbjct: 1019 AI 1020



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/448 (19%), Positives = 169/448 (37%), Gaps = 107/448 (23%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I+F+ +I+    S      + ++  M++   +P+  T   L+ ALC+ G+ +    +LD+
Sbjct: 519 ITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDK 578

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +H    +   +   ++++   +   + + + L   M+++N++ D+  Y++I    ++   
Sbjct: 579 LHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGK 638

Query: 144 LESALVVYEEMLKRG-FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL-------- 194
           + +AL  Y  +L +G  S    +YTTF+      G+ + A    ++ME  GL        
Sbjct: 639 MVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATN 698

Query: 195 ----------------------------KPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
                                        P   T+N+L+ G AK K + +  +    MM 
Sbjct: 699 VILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMR 758

Query: 227 RKLLP---SCSA--------------------------------FNEMIRRLCECGNAKQ 251
             + P   +C +                                FN +I + CE     +
Sbjct: 759 TGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGK 818

Query: 252 ANGMLTL-----------------------------------ALDKGFSPNEITYSHLIG 276
           A  ++ +                                    L++G  P+   Y  L+ 
Sbjct: 819 AFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVN 878

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              + G I    KL  EME   IS    A ++L+  L +CGK+EEA      M   SL+P
Sbjct: 879 RMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIP 938

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +  + +L+ +     +  +AL L + M
Sbjct: 939 TIATFTTLMHMFCRNESLVEALKLKDTM 966



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 115/259 (44%)

Query: 119  MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
            M+R  +  D +    ++    K   L+  L + ++ML  G + +   +   I  YCE  +
Sbjct: 756  MMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDE 815

Query: 179  IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
            + +A  L+  M    + P   T + +I   ++   ++ES     +M+ R  +P    +  
Sbjct: 816  VGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIA 875

Query: 239  MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            ++ R+C  G+   A  +       G S  ++  S L+ G AK G+++E   +   M  KS
Sbjct: 876  LVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKS 935

Query: 299  ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            + PT+  +T+L+   C+   L EA K    M    +   V  Y  L+      G+ A AL
Sbjct: 936  LIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASAL 995

Query: 359  HLCEEMVSEGLKPSTSYLC 377
             L +E+   GL P+ +  C
Sbjct: 996  KLYKEIKQRGLWPNMTTYC 1014



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/201 (19%), Positives = 88/201 (43%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            AFD+   +        + + +++I V+++         +   MLE    P+      L++
Sbjct: 819  AFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVN 878

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             +C+ G +     + D +     S   +  ++L+  + +  ++EE  ++L  MLRK++I 
Sbjct: 879  RMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIP 938

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
                ++ +++   +  +L  AL + + M       +   Y   I   C  G +  A  L 
Sbjct: 939  TIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLY 998

Query: 187  QEMENAGLKPYDETFNLLIEG 207
            +E++  GL P   T+ +LI+ 
Sbjct: 999  KEIKQRGLWPNMTTYCILIDA 1019


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 6/348 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++SFN+L +  +K    D V+ +Y  ++     PN  T  T I   CK G+LQ  +   
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF 186

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +     SP V+  T LI    +   +E  + L K M R  M  + + Y+ ++    K 
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A  +Y  M++     NS VYTT I  + + G  + A   + +M N G++     +
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++I G     +++E+    E M    L+P    F  M+    + G  K A  M    ++
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +GF P+ +  S +I G AK G++ E + +Y+ +E          YT LI +LC+ G   E
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIE----KANDVMYTVLIDALCKEGDFIE 421

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            ++ F  +    LVP   +Y S +    ++GN   A  L   MV EGL
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL 469



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 7/362 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++   S ++++F  LI    K+   ++   +Y+ M       N  T   LI   CK G+
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q   +M  R+   R  P  +V T++I    Q    +  M  L +ML + M  D  AY +
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+        L+ A  + E+M K     +  ++TT + AY + G+++ A  +  ++   G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSY-CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            +P     + +I+G AK  ++ E++ Y C +  +  +      +  +I  LC+ G+  + 
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM------YTVLIDALCKEGDFIEV 422

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             + +   + G  P++  Y+  I G  K+G + +  KL   M  + +   L AYT+LI  
Sbjct: 423 ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG 482

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L   G + EA + F  M +  + P   +++ L+  + ++GN A A  L  +M   GL  +
Sbjct: 483 LASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTA 542

Query: 373 TS 374
            S
Sbjct: 543 VS 544



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 171/355 (48%), Gaps = 4/355 (1%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           N  IH +  S+   L  +   +++     P+ ++  +++S +CK GQ++   D++  +  
Sbjct: 25  NKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPR 84

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI---HDTIAYSLIVYAKVKMRN 143
             C P VI   SLI    +   I    ++L+ +   +      D ++++ +     KM+ 
Sbjct: 85  FGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKM 144

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+   V    MLK   S N   Y+T+I  +C+ G+++ A      M+   L P   TF  
Sbjct: 145 LDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTC 203

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  KA  +E ++S  ++M   ++  +   +  +I   C+ G  ++A  M +  ++  
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN + Y+ +I G+ + G+    +K   +M  + +   + AY  +IS LC  GKL+EA 
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           +  + M+   LVP + I+ +++  + + G    A+++  +++  G +P    L +
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 169/355 (47%), Gaps = 5/355 (1%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S ++++++T I    KS    L  + +  M  +   PN  T   LI   CK G L+  V 
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +   +   R S  V+  T+LI    ++  ++    +  RM+   +  +++ Y+ I+    
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           +  + ++A+    +ML +G   +   Y   I   C  GK++EA  ++++ME + L P   
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            F  ++    K+ R++ +++   +++ R   P   A + MI  + + G   +A  ++   
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFC 397

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           ++K    N++ Y+ LI    KEG+  EV +L+ ++    + P    YTS I+ LC+ G L
Sbjct: 398 IEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            +A K    M    L+  +  Y +L+     KG   +A  + +EM++ G+ P ++
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 5/228 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E+      ++ F T+++   KS R      +Y  ++E    P+   + T+I 
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            + K GQL   +     ++        ++ T LI  + +E    E   L  ++    ++ 
Sbjct: 382 GIAKNGQLHEAI-----VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+  +    K  NL  A  +   M++ G   +   YTT I      G + EA  + 
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
            EM N+G+ P    F+LLI    K   +  +      M  R L+ + S
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 1/128 (0%)

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           + E+L +  ++     LP     N+ I +L        +   L   + +G++P+  +++ 
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK-SH 332
           ++    K G+++    + + M      P + +Y SLI   C+ G +  A    + ++ SH
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 333 SLVPGVDI 340
             +   DI
Sbjct: 122 GFICKPDI 129


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 159/349 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+  LI  +  + R D   R++  M      P   T   L+  LCK  ++     +L  +
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K   P V+   +LI  + QE R ++   LL++M  +    D   Y+ +V+   K   +
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                V  E + +G +     Y   I  YC+ G ++ A  ++Q M+   + P  +TFN +
Sbjct: 283 GHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEV 342

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G     ++ +++++  QM    L P+   FN +I   C  G  K A  +L L  + G 
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGV 402

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  TY+  I     EG+++E   L+  +  K I      YTSL+   CQ G ++ A  
Sbjct: 403 LPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + M S + +P V  Y +L+    +     +A+ L ++M  +G++P+T
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTT 511



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 3/367 (0%)

Query: 9   DVCRYLEQ--RGFSLSLI-SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D CR   +  RG+    + ++  L+  + K  R      +   M+     PN  T   LI
Sbjct: 179 DACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALI 238

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LC+ G+      +L+++  +R SP     T ++  + +  ++  G  +L   + K + 
Sbjct: 239 GGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVA 298

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + + Y+ ++    K  ++++AL V + M +   +     +   I  +C  GK+ +A   
Sbjct: 299 LEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAF 358

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M  AGL P   TFN LI G       + +L   + M    +LP    +   I  LC+
Sbjct: 359 LTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCD 418

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  ++A+ + +    KG   + + Y+ L+ GY + G+I     L  +M  ++  P +  
Sbjct: 419 EGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHT 478

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI  LC+  +L+ A      MK   + P    +  L+   L     A A  + E+M+
Sbjct: 479 YNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMI 538

Query: 366 SEGLKPS 372
           S G KP 
Sbjct: 539 SSGCKPD 545



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 1/328 (0%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           +  ML++   PN  T  TLI+A CK   L      L R+     +P       L+L + +
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 106 EERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
              +     L  +M R+    +D  +Y++++        ++ A  V+ +M +        
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            YT  +   C+  ++ EA  L+ EM N G+ P   T+N LI G  +  R ++     E+M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
             ++  P C  + +++  LC+ G       +L  A+ KG +   +TY+ LI GY K G++
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           +  L +   M+   ++P +  +  +I   C  GK+ +A  +   M    L P    + SL
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +      G +  AL L + M   G+ P 
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPD 405



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 146/319 (45%), Gaps = 3/319 (0%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T   LI+  CKGG ++  +D+L  +   R +P V     +I       ++ + M  L +M
Sbjct: 303 TYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQM 362

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               +  +T+ ++ ++  +  +   + AL + + M + G   +   Y  FI A C+ G++
Sbjct: 363 AGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQL 422

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           EEA+ L   +   G+K ++  +  L+ G  +   I+ +    E+M S   +P    +N +
Sbjct: 423 EEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTL 482

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+     +A  +L     +G  P   T++ LI     + +  +  K+Y +M     
Sbjct: 483 IDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGC 542

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH--SLVPGVDIYESLVGIHLEKGNKAKA 357
            P    YT  IS+    G  +E +    +++ H   + P V+ Y +++  +++ G K KA
Sbjct: 543 KPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKA 602

Query: 358 LHLCEEMVSEGLKPS-TSY 375
                +M+S  + P  T+Y
Sbjct: 603 FFAHVKMLSVPIDPDCTTY 621



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 126/257 (49%), Gaps = 1/257 (0%)

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEY 176
           RM    +  DT  Y+ ++    +   L +A  ++ +M +R G   + + YT  I   C  
Sbjct: 115 RMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAA 174

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+I++A  +  +M     +P   T+ +L++G  K +R+ E+ +   +M+++ ++P+   +
Sbjct: 175 GRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTY 234

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I  LC+ G       +L     +  SP+  TY+ ++ G  K G++    K+ +E   
Sbjct: 235 NALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIG 294

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K ++  +  Y +LI+  C+ G ++ A    ++MK + + PGV  +  ++      G   K
Sbjct: 295 KGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHK 354

Query: 357 ALHLCEEMVSEGLKPST 373
           A+    +M   GL P+T
Sbjct: 355 AMAFLTQMAGAGLSPNT 371



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/379 (21%), Positives = 160/379 (42%), Gaps = 22/379 (5%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S + ++FN+LI          +  R+   M E    P+  T    I ALC  GQL+  
Sbjct: 366 GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEA 425

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +   +  K      ++ TSL+    Q   I+    L+++M  +N + D   Y+ ++  
Sbjct: 426 HSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDG 485

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K++ L+ A+ + ++M K+G    +  +   I       K  +A  + ++M ++G KP 
Sbjct: 486 LCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPD 545

Query: 198 DETFNLLI-----EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            +T+ L I     EG  K + I+ ++    +M    + P    +N +I+   + G  ++A
Sbjct: 546 KQTYTLKISTDWFEGATKEENIDMAVV---EMHEAGVFPDVETYNAIIKAYVDAGLKEKA 602

Query: 253 NGMLTLALDKGFSPNEITYSHLIG---------GYAKEG-----EIQEVLKLYYEMEYKS 298
                  L     P+  TYS L+           +  E      +++ + +L+ +M    
Sbjct: 603 FFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESD 662

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            +P +  Y +L+  LC   +LEE +     M+ +S++   D+ + L+G +       +A 
Sbjct: 663 AAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREAC 722

Query: 359 HLCEEMVSEGLKPSTSYLC 377
                M  +  +P     C
Sbjct: 723 EQFRSMAHQSFQPGLKSCC 741



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/379 (20%), Positives = 147/379 (38%), Gaps = 22/379 (5%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  +G     + + +L+H   +    D  + + + M      P+  T  TLI  LCK  +
Sbjct: 432 LPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKR 491

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   +D+LD++  +   P       LI +++ +++  +   + ++M+      D   Y+L
Sbjct: 492 LDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTL 551

Query: 134 IVY-----AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            +         K  N++ A+V   EM + G   +   Y   I AY + G  E+A     +
Sbjct: 552 KISTDWFEGATKEENIDMAVV---EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVK 608

Query: 189 MENAGLKPYDETFNLLI--------------EGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           M +  + P   T+++L+              E   K   +       EQM      P  S
Sbjct: 609 MLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGIS 668

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +  ++R LC     ++   +L          +E    +L+G Y      +E  + +  M
Sbjct: 669 TYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSM 728

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
            ++S  P L +   L+S LC  G    A   F  M          +++ L+    EKG+ 
Sbjct: 729 AHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHA 788

Query: 355 AKALHLCEEMVSEGLKPST 373
              L +   M ++    ST
Sbjct: 789 GACLEMLSVMDAKKCVAST 807



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/332 (19%), Positives = 136/332 (40%), Gaps = 28/332 (8%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++  + A D+   ++++G   +  +FN LI  +    ++    ++Y+ M+ +   P++ T
Sbjct: 489 VKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQT 548

Query: 61  IRTLISA-LCKGGQLQTYVDM-LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
               IS    +G   +  +DM +  +H     P V    ++I   +     E+      +
Sbjct: 549 YTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVK 608

Query: 119 MLRKNMIHDTIAYSLI-----------------VYAKVKMRNLESALVVYEEMLKRGFSA 161
           ML   +  D   YS++                 ++  V +RNL+    ++E+M +   + 
Sbjct: 609 MLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQE---LFEQMCESDAAP 665

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
               Y   +   C   ++EE   L+ +M+   +   DE  +  + GC     +E     C
Sbjct: 666 GISTYKALLRGLCNQCRLEEVEWLLLKMQGNSIL-LDEDMSDYLLGC--YCNLEMYREAC 722

Query: 222 EQ---MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           EQ   M  +   P   +   ++  LC+ G+   A  + +  L  G++ +E+ +  LI   
Sbjct: 723 EQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCL 782

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            ++G     L++   M+ K    +   Y SL+
Sbjct: 783 HEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 11/378 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L+ VA +    L+  G+  S +++N L+ V  ++DR D  + +++ M ++    +  T+ 
Sbjct: 212 LWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLG 271

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             +  LCK G+ +  + ++++   K  +   ++ T +I  + +    EE M  L RM   
Sbjct: 272 CFVHLLCKAGRWREALALIEKEEFKLDT---VIYTQMISGLCEASLFEEAMDFLSRMRSS 328

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           + I + + Y +++   ++ R L     +   M+  G   +  ++ + I AYC  G    A
Sbjct: 329 SCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYA 388

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE-------SLSYCEQMMSRKLLPSCSA 235
             L+++M + G +P    +N+LI G    +++           +Y E + +  +L   + 
Sbjct: 389 YKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNV 448

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
            N + R LC  G  ++A  ++   + KGF P+  TYS +IG      ++     L+ EM+
Sbjct: 449 SN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P +  YT LI S C+ G L++A K+F  M      P V  Y +L+  +L+    +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 356 KALHLCEEMVSEGLKPST 373
            A  L E M+SEG  P+ 
Sbjct: 568 SANELFEMMLSEGCIPNV 585



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 162/378 (42%), Gaps = 51/378 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ + R +  +GF     +++ +I ++  + + D  + +++ M  N   P+  T   
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G LQ      D +    C+P V+  T+LI   ++  ++     L + ML + 
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVY-------------------------------- 151
            I + + Y+ ++    K   +E A  +Y                                
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 152 -------------------EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
                              + M   G   N  VY   I  +C+ GK++EA  +  +M   
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P   T++ LI+   K KR++ +L    +M+     P+   + EMI  LC+ G   +A
Sbjct: 701 GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++++  +KG  PN +TY+ +I G+ K G++ + L+L  +M  K  +P    Y  LI+ 
Sbjct: 761 YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINH 820

Query: 313 LCQCGKLEEADKYFKIMK 330
            C  G L++A +    MK
Sbjct: 821 CCAAGLLDDAHQLLDEMK 838



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 164/381 (43%), Gaps = 48/381 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A+ V R +   GF++   +    +H++ K+ R    WR    ++E   +  +  I T
Sbjct: 248 LDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR----WREALALIEKEEFKLDTVIYT 303

Query: 64  -LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEER--------IEE 111
            +IS LC+    +  +D L R+    C P V+    L+   LR  Q  R        I E
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE 363

Query: 112 GMVLLKRMLRKNMIHD-------TIAYSL-------------IVYAKV-----------K 140
           G    +R+   ++IH        + AY L             +VY  +            
Sbjct: 364 GCYPSRRIF-NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS 422

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           +  LE A   Y EML      N    +      C  GK E+A  +++EM + G  P   T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I     A +++ +    E+M S  ++P    +  +I   C+ G  +QA       +
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G +PN +TY+ LI  Y K  ++    +L+  M  +   P +  YT+LI   C+ G++E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 321 EADKYFKIMKSHSLVPGVDIY 341
           +A + +  M+ ++ +P VD+Y
Sbjct: 603 KACQIYARMRGNADIPDVDMY 623



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 14/323 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +   G   + I ++ LI    K  + D    ++  M E    PN  T  +LI 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  +L   + +L R+    C+P VI+ T +I  + +  + +E   L+  M  K    
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K   ++  L +  +M  +G + N   Y   I   C  G +++A+ L+
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM+      +   +  +IEG  +   I  SL   +++     +P   A+  +I   C+ 
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKA 892

Query: 247 GNAKQANGMLTLALDKGFS-------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           G  +     L L L K  S        ++  YS LI   +   ++ +  +LY +M  +  
Sbjct: 893 GRLE-----LALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947

Query: 300 SPTLPAYTSLISSLCQCGKLEEA 322
            P L  +  L+  L +  + EEA
Sbjct: 948 IPELSIFFYLVKGLIRINRWEEA 970



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 139/349 (39%), Gaps = 45/349 (12%)

Query: 44  RIYQHMLENIRYPNEATIRTLISAL----CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           R+ +  L  IR  ++  +  L++ L    C+ G     ++ L R+      P  +   +L
Sbjct: 179 RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNAL 238

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +   ++ +R++   ++ + M       D       V+   K      AL + E   K  F
Sbjct: 239 VRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEF 295

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             ++ +YT  I   CE    EEA   +  M ++   P   T+ +L+ GC + +++     
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
               M++    PS   FN +I   C  G+   A  +L    D G  P  + Y+ LIGG  
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK-YFKIMKSHSLVPGV 338
              ++                P+L               LE A+K Y +++ +H ++  V
Sbjct: 416 GNEKL----------------PSLDV-------------LELAEKAYGEMLDAHVVLNKV 446

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS-------YLCSAS 380
           ++  +L       G   KA  +  EM+S+G  P TS        LC+AS
Sbjct: 447 NV-SNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 156/327 (47%), Gaps = 11/327 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           PN  T   LI  LC+ G+L+        I   G R + +VI    L+  +   +R+ E M
Sbjct: 96  PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVI--NQLLKGLCDGKRVGEAM 153

Query: 114 -VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK---RGFSANSFVYTTF 169
            VLL+RM       DT++YS+++         E AL +   M     R    N   YTT 
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I   C+    + A  + Q+M + G+KP ++T+N LI G     + +E +   E+M +R L
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P C  +  ++  LC      + +  L L ++ G SP+   ++     YAK G I + + 
Sbjct: 274 KPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 330

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           ++ +M    +SP +  Y +LI +LC+ G++++A+  F  M +  + P + ++ SLV    
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 390

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTSYL 376
                 +A  L  EM+ +G+ P+  + 
Sbjct: 391 TVDKWERAEELVYEMLDQGICPNAVFF 417



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 161/351 (45%), Gaps = 7/351 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ T+I  + K+   D    ++Q M++N   PN  T   LI      G+ +  V ML
Sbjct: 206 NVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQML 265

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +++  +   P      SL+  +     + E    L  M+   +  D   +++   A  K 
Sbjct: 266 EKMSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKC 322

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             ++ A+ ++ +M + G S N   Y   I A C+ G++++A     +M N G+ P    F
Sbjct: 323 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 382

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L+ G     + E +     +M+ + + P+   FN +I  LC  G   +   ++ L   
Sbjct: 383 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 442

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+  +Y+ LI GY   G   E  K++  M    +SPT   Y +L+   C   ++++
Sbjct: 443 VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDD 502

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKAKALHLCEEMVSEGLK 370
           A   F+ M    + PGV  Y +++      ++ ++AK L+L   M++ G K
Sbjct: 503 AYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL--NMINSGTK 551



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 155/355 (43%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + A D+   + Q G S +++++  LI  + K  R D     +  M+     PN     
Sbjct: 324 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +L+  LC   + +   +++  +  +   P  +   +LI  +    R+ EG  L+  M   
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D  +Y+ ++         + A  V++ M+  G S     Y T +  YC   +I++A
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            CL +EM   G+ P   T+N ++ G  + KR  E+      M++         +N ++  
Sbjct: 504 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 563

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+     +A  M      KG   N IT++ +IG   K G  ++ + L+  +    + P 
Sbjct: 564 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 623

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           +  Y  +  +L + G LEE D  F  M+ +   P   +  +LV   L +G+ ++A
Sbjct: 624 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 678



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 149/325 (45%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M+EN   P+        SA  K G +   +D+ +++     SP V+   +LI  + +  R
Sbjct: 300 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 359

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++  V   +M+ + +  + + ++ +VY    +   E A  +  EML +G   N+  + T
Sbjct: 360 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 419

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I   C  G++ E   L+  ME+ G++P   ++  LI G   A R +E+    + M+S  
Sbjct: 420 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG 479

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           L P+   +N ++   C       A  +    L KG +P  +TY+ ++ G  +     E  
Sbjct: 480 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAK 539

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +LY  M        +  Y  +++ LC+   ++EA K F+ + S  L   +  +  ++G  
Sbjct: 540 ELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 599

Query: 349 LEKGNKAKALHLCEEMVSEGLKPST 373
           L+ G K  A+ L   + + GL P+ 
Sbjct: 600 LKGGRKEDAMDLFAAIPANGLVPNV 624



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 159/361 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G S     FN       K    D    I+  M ++   PN      LI ALCK G++ 
Sbjct: 302 ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVD 361

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                 +++  +  +P ++V  SL+  +   ++ E    L+  ML + +  + + ++ ++
Sbjct: 362 DAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLI 421

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +  +     + + M   G   ++F YT  I  YC  G+ +EA  +   M + GL 
Sbjct: 422 CNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLS 481

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P + T+N L+ G   A RI+++     +M+ + + P    +N ++  L +     +A  +
Sbjct: 482 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 541

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               ++ G   +  TY+ ++ G  K   + E  K++  +  K +   +  +T +I +L +
Sbjct: 542 YLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLK 601

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            G+ E+A   F  + ++ LVP V  Y  +    +E+G+  +   L   M   G  P++  
Sbjct: 602 GGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 661

Query: 376 L 376
           L
Sbjct: 662 L 662



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/361 (20%), Positives = 160/361 (44%), Gaps = 7/361 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           + G+ ++ I  N L+  +    R  + +  + Q M E    P+  +   L+   C   + 
Sbjct: 126 KTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRA 185

Query: 75  QTYVDMLDRI---HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           +  +++L  +   HG+ C P V+  T++I  + + +  +    + ++M+   +  +   Y
Sbjct: 186 EEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTY 245

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +++  + +   +  + + E+M  RG   + + Y + +   C    + E +  +  M  
Sbjct: 246 NCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVE 302

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL P    FN+     AK   I++++    +M    L P+   +  +I  LC+ G    
Sbjct: 303 NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDD 362

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A       +++G +PN + ++ L+ G     + +   +L YEM  + I P    + +LI 
Sbjct: 363 AEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLIC 422

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           +LC  G++ E  +   +M+   + P    Y  L+  +   G   +A  + + MVS GL P
Sbjct: 423 NLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSP 482

Query: 372 S 372
           +
Sbjct: 483 T 483



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 10/266 (3%)

Query: 115 LLKRMLRKNMIH---DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
           L  RM+R+  I    +T  YS+++    +M  L+ +   +  +LK G+  N  V    + 
Sbjct: 82  LFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLK 141

Query: 172 AYCEYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS---R 227
             C+  ++ EA + L+Q M   G  P   ++++L++G     R EE+L     M +   R
Sbjct: 142 GLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGR 201

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
              P+   +  +I  LC+     +A G+    +D G  PN  TY+ LI GY   G+ +EV
Sbjct: 202 SCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEV 261

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           +++  +M  + + P    Y SL++ LC    L E   +  +M  + L P   I+      
Sbjct: 262 VQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSA 318

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
           + + G   KA+ +  +M   GL P+ 
Sbjct: 319 YAKCGMIDKAMDIFNKMRQHGLSPNV 344



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 110/268 (41%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G      S+  LI     + R D   +++  M+     P E T  TL+   C   +
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +   +  K  +P V+   +++  + Q +R  E   L   M+      D   Y++
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    K   ++ A  +++ +  +G   N   +T  IGA  + G+ E+A  L   +   G
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+ L+ E   +   +EE  S    M      P+    N ++RRL   G+  +A 
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 679

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKE 281
             L+   ++ FS    T S LI  +  +
Sbjct: 680 AYLSKLDERNFSVEASTTSLLISIFTSD 707



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/296 (20%), Positives = 122/296 (41%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G   + + FNTLI  +    R     R+   M      P+  +   LIS  C  G+  
Sbjct: 407 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTD 466

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + D +     SP  +   +L+       RI++   L + MLRK +    + Y+ I+
Sbjct: 467 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 526

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +   + +    A  +Y  M+  G   + + Y   +   C+   ++EA  + Q + + GL+
Sbjct: 527 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 586

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               TF ++I    K  R E+++     + +  L+P+   +  +   L E G+ ++ + +
Sbjct: 587 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSL 646

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            +     G +PN    + L+      G+I        +++ ++ S      + LIS
Sbjct: 647 FSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLIS 702



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 46/201 (22%)

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH------------ 273
           S K+ P+   ++ +I  LC  G  K +     L L  G+  N+I  +             
Sbjct: 91  SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150

Query: 274 ------------------------LIGGYAKEGEIQEVLKLYYEMEY---KSISPTLPAY 306
                                   L+ G+  E   +E L+L   M     +S  P +  Y
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T++I  LC+    + A+  F+ M  + + P  D Y  L+  +L  G   + + + E+M +
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 367 EGLKPST-------SYLCSAS 380
            GLKP         +YLC+ S
Sbjct: 271 RGLKPDCYTYGSLLNYLCALS 291


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 173/371 (46%), Gaps = 17/371 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF + R +E  G      ++N LI+ + K  R D    ++  +      PN  T  +
Sbjct: 268 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 327

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LCK G++      L+++    C+P     +S I  + + +  +EG+  +  ML+K+
Sbjct: 328 LINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 387

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +   T+ Y+++++  +K RN       + EM+  G + +   YTT + AYC  G++ EA 
Sbjct: 388 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 447

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR-- 241
            ++ EM   G+      +N L++G A   + + ++S  +QM S   +P+   +  ++R  
Sbjct: 448 NVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 507

Query: 242 ---RLCE-------CGNAKQAN-----GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
              RL E        G  K        G+  +     F PN  TYS ++ G++++G  +E
Sbjct: 508 VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 567

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L   M+  SIS     YT+L++  C+  +  +A      M  H  +P +  Y+ L+ 
Sbjct: 568 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLS 627

Query: 347 IHLEKGNKAKA 357
             + +G   KA
Sbjct: 628 GLICEGQTDKA 638



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 174/365 (47%), Gaps = 7/365 (1%)

Query: 12  RYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           RYL    + G+     +FN+LI    ++++ D+   ++  M       +  +   LI   
Sbjct: 32  RYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGF 91

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G++   V++     G+   P + +  +L+  + +  R EEG+++L+RM        T
Sbjct: 92  CETGRIDEAVELF----GEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPST 147

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            AY+ +V  +   R  + A  + +EM ++G +      T  I AYC+ G++ +A  +++ 
Sbjct: 148 RAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLEL 207

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M+  G KP   T+N L++G     ++ ++++   +M    + P    +N +IR  C  G+
Sbjct: 208 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGH 267

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +L L    G   ++ TY+ LI    K+G   +   L+  +E + I P    + S
Sbjct: 268 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 327

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI+ LC+ GK++ A K+ + M S    P    Y S +    +     + L    EM+ + 
Sbjct: 328 LINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 387

Query: 369 LKPST 373
           +KPST
Sbjct: 388 VKPST 392



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 150/326 (46%)

Query: 47  QHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQE 106
           Q M E    P   T   +I+A CK G++   + +L+ +  + C P V    +L+     E
Sbjct: 171 QEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNE 230

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
            ++ + M LL +M    +  D + Y+L++  +    ++ESA  +   M   G  A+ + Y
Sbjct: 231 GKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY 290

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              I A C+ G+ ++A  L   +E  G+KP   TFN LI G  K+ +++ +  + E+M+S
Sbjct: 291 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS 350

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
               P    ++  I  LC+   +++    +   L K   P+ + Y+ +I    KE     
Sbjct: 351 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 410

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
           V + + EM     +P +  YT+ + + C  G+L EA+     M  + +      Y +L+ 
Sbjct: 411 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMD 470

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
            H   G    A+ + ++M S    P+
Sbjct: 471 GHASIGQTDHAVSILKQMTSVASVPN 496



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 155/368 (42%), Gaps = 4/368 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA D+   +  RGF+  ++S+  LI    ++ R D    ++  M +    P+      L
Sbjct: 63  DVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAAL 118

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK G+ +  + ML R+      P      +++     E + +E   +L+ M  K +
Sbjct: 119 VKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGL 178

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               +  + ++ A  K   +  AL V E M  RG   N + Y   +  +C  GK+ +A  
Sbjct: 179 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMA 238

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ +M   G+ P   T+NLLI G      IE +      M    L+     +N +I  LC
Sbjct: 239 LLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 298

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G   QA  +      +G  PN +T++ LI G  K G++    K   +M     +P   
Sbjct: 299 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTY 358

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y+S I  LC+    +E   +   M    + P    Y  ++   L++ N         EM
Sbjct: 359 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418

Query: 365 VSEGLKPS 372
           VS G  P 
Sbjct: 419 VSSGCNPD 426



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 4/272 (1%)

Query: 98  SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
           ++I  + +   +   +  L  M+R     D   ++ ++    +   ++ A  ++++M  R
Sbjct: 16  AVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLR 75

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           GF+ +   Y   I  +CE G+I+EA  L  EM+    +P    +  L++G  KA R EE 
Sbjct: 76  GFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEG 131

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           L    +M      PS  A+  ++   C    AK+A  ML    +KG +P  +T + +I  
Sbjct: 132 LLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINA 191

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           Y KEG + + L++   M+ +   P +  Y +L+   C  GK+ +A      M+   + P 
Sbjct: 192 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPD 251

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
              Y  L+      G+   A  L   M  +GL
Sbjct: 252 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 283



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 4/172 (2%)

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N +I    +   +  +L Y   M+     P    FN +I   C       A  +    
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             +GF+ + ++Y+ LI G+ + G I E ++L+ EM+     P +  Y +L+  LC+ G+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           EE     + MK     P    Y ++V     +    +A  + +EM  +GL P
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAP 180



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/387 (20%), Positives = 146/387 (37%), Gaps = 87/387 (22%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK--- 70
           LE RG   + ++FN+LI+ + KS + D+ W+  + M+     P+  T  + I  LCK   
Sbjct: 313 LETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKG 372

Query: 71  --------GGQLQTYVD--------------------MLDRIHGKR----CSPMVIVNTS 98
                   G  LQ  V                     ++ R  G+     C+P V+  T+
Sbjct: 373 SQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTT 432

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK-------------------- 138
            +     E R+ E   +L  M +  +  DT+AY+ ++                       
Sbjct: 433 SMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVA 492

Query: 139 ---------------VKMRNLESALVV-----------------YEEMLKRGFSANSFVY 166
                          V+MR +E  L +                 ++ M K  F  NS  Y
Sbjct: 493 SVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTY 552

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           ++ +  + E G+ EEA  L+  M+   +   ++ +  L+    K+KR  ++      M+ 
Sbjct: 553 SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQ 612

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
              +P   ++  ++  L   G   +A  +   +  K +SP+EI +  +I G  K+G    
Sbjct: 613 HGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDI 672

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSL 313
             ++   +E  +  P+   Y  L   L
Sbjct: 673 SREMIIMLERMNCRPSHQTYAMLTEEL 699



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 4/139 (2%)

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +IR LC   +   A   L+L +  G+ P+  T++ LI GY +  ++     L+ +M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             +  +  + +Y +LI   C+ G+++EA + F  M      P + +Y +LV    + G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128

Query: 355 AKALHLCEEMVSEGLKPST 373
            + L +   M   G +PST
Sbjct: 129 EEGLLMLRRMKELGWRPST 147


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 162/349 (46%), Gaps = 5/349 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q  F  ++ ++N  ++ + K        +I+  ML     PN  T   ++  LC   +  
Sbjct: 30  QEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTD 89

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++L  +  K  +P   +   L+  + +  +++    L KR+  +  + D I+Y+++ 
Sbjct: 90  AALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSL-DRISYNMLT 148

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM----EN 191
           Y   K   ++ AL V+ EM +     +   Y   +  YC  G++E+A  L++EM    + 
Sbjct: 149 YGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKG 208

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + + P   ++N +I G  KA+++  +     +M+     P+   FN ++  LC  G   +
Sbjct: 209 SDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDE 268

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           AN M    +++   P  +TY+ LI G+A+   I +    + +M  + + P +  YT+LI 
Sbjct: 269 ANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIG 328

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            LC   K+E+A +  K M S    P V  Y  ++G   + G   +A  L
Sbjct: 329 GLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKL 377



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 177/379 (46%), Gaps = 20/379 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-----LENIRYPNEA 59
           + A ++ + +E +  + +    N L+  + K+ + D  + +Y+ +     L+ I Y    
Sbjct: 89  DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISY---- 144

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               L   LCK  Q+   + +   +      P ++    L+    +  R+E+ M LL+ M
Sbjct: 145 --NMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEM 202

Query: 120 LR----KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +      +++ D  +Y+ ++    K R L +A  V   M+K G S N   + T +   C 
Sbjct: 203 IEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCL 262

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK++EAN + + M     +P   T+ +LI G A+A RI+++  Y   M+ R + P+   
Sbjct: 263 TGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYT 322

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I  LC+    + A  +L      G  PN +TY+ +IG   K G+I+   KL+ +  
Sbjct: 323 YTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAM 382

Query: 296 YKSISPTLP---AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEK 351
               +   P   AY++++  LC+  K  EA +YF  M    LV    IY+++  G+ L +
Sbjct: 383 GSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQ 442

Query: 352 GNKAKALHLCEEMVSEGLK 370
             + K   +C E  + G++
Sbjct: 443 ETE-KVERVCLEASAHGIE 460



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 156/347 (44%), Gaps = 23/347 (6%)

Query: 48  HMLENIRYPNEA------------------TIRTLISALCKGGQLQTYVDMLDRIHGKRC 89
           H+LENI+ P  A                  T    ++AL KGG       + D +  K C
Sbjct: 9   HVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKEC 68

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
            P +     ++  +  + + +  + LL+ M  K +   T   +++V    K   +++A  
Sbjct: 69  LPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYE 128

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +Y+  L    S +   Y       C+  +I+ A  +  EME   + P   T+N L+ G  
Sbjct: 129 LYKR-LSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYC 187

Query: 210 KAKRIEESLSYCEQMMSRK----LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +A R+E++++  E+M+  K    ++P   ++N +I   C+      A  +L   +  G S
Sbjct: 188 RAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCS 247

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN +T++ L+ G    G++ E   ++  M  ++  PT   YT LI+   +  ++++A+ Y
Sbjct: 248 PNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDY 307

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           F  M    + P V  Y +L+G   +      AL + + M S G +P+
Sbjct: 308 FVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPN 354


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 165/349 (47%), Gaps = 1/349 (0%)

Query: 31  HVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCS 90
           H++ +  R D   R+ + + E +  PN  T   +I  LCK G+L     +  R+    C 
Sbjct: 162 HILLRLAR-DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCL 220

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+   SLI    +   ++E   L++ M R     D + Y+ ++    K   +E+A   
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGY 280

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           +  M + G  AN   ++TF+ A+C+ G + EA  L  +M   G+   + T+  LI+G  K
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           A R+++++   ++M+ + +  +   +  ++  LC+     +A  +L +    G   NE+ 
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI G+      ++ L L  EM+ K +   +  Y +LI  LC   KL+EA      M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
              L P   IY +++    + G   +A+ + ++++  G +P+   L  A
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEA 509



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/341 (22%), Positives = 155/341 (45%), Gaps = 13/341 (3%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A+     +++ G   ++++F+T +    K        +++  M       NE T   L
Sbjct: 275 ETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCL 334

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK G+L   + +LD +  +     V+  T L+  + +E ++ E   +L+ M +  +
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ +++     +N E AL +  EM  +G   +  +Y   I   C   K++EA  
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+ +M+ +GL+P    +  +++ C K+ ++ E+++  ++++     P+    NE ++   
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFN 514

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E              + KG S +++ Y+ L+ GY K+G + +   L  +M    +   L 
Sbjct: 515 E-------------MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLF 561

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            YT  IS  C    + EA + F  M  H + P   +Y  L+
Sbjct: 562 CYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 4/316 (1%)

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           + + TL+S L   G L   V  + R+   R  P       ++LR+ ++        L++R
Sbjct: 123 SVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGR----LVRR 178

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           +  +    +   +++++    K   L  A  ++  M + G   +   + + I  Y + G+
Sbjct: 179 LFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGE 238

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++E   L++EM  +G K    T+N LI    K  R+E +  Y   M    ++ +   F+ 
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            +   C+ G  ++A  +      +G + NE TY+ LI G  K G + + + L  EM  + 
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +   +  YT L+  LC+  K+ EA+   ++M+   +     +Y +L+  H    N  KAL
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKAL 418

Query: 359 HLCEEMVSEGLKPSTS 374
            L  EM ++GL+   S
Sbjct: 419 GLLSEMKNKGLELDIS 434



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/251 (19%), Positives = 105/251 (41%), Gaps = 16/251 (6%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV R +E+ G   + + + TLIH    +  ++    +   M       + +    LI 
Sbjct: 382 AEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC   +L     +L ++      P  I+ T+++    +  ++ E + +L+++L      
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +                L  A+ ++ EM+ +G S +  VYT  +  Y + G + +A  L 
Sbjct: 502 NNGC-------------LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALK 548

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M ++GL+     +   I G      + E+     +M+   + P  + +N +I ++ E 
Sbjct: 549 AKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEI 608

Query: 247 ---GNAKQANG 254
              G   +++G
Sbjct: 609 RELGGGNKSSG 619


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 180/378 (47%), Gaps = 11/378 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L+ VA +    L+  G+  S +++N L+ V  ++DR D  + +++ M ++    +  T+ 
Sbjct: 212 LWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLG 271

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             +  LCK G+ +  + ++++   K  +   ++ T +I  + +    EE M  L RM   
Sbjct: 272 CFVHLLCKAGRWREALALIEKEEFKLDT---VIYTQMISGLCEASLFEEAMDFLSRMRSS 328

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           + I + + Y +++   ++ R L     +   M+  G   +  ++ + I AYC  G    A
Sbjct: 329 SCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYA 388

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE-------SLSYCEQMMSRKLLPSCSA 235
             L+++M + G +P    +N+LI G    +++           +Y E + +  +L   + 
Sbjct: 389 YKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNV 448

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
            N + R LC  G  ++A  ++   + KGF P+  TYS +IG      ++     L+ EM+
Sbjct: 449 SN-LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P +  YT LI S C+ G L++A K+F  M      P V  Y +L+  +L+    +
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 356 KALHLCEEMVSEGLKPST 373
            A  L E M+SEG  P+ 
Sbjct: 568 SANELFEMMLSEGCIPNV 585



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 162/378 (42%), Gaps = 51/378 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ + R +  +GF     +++ +I ++  + + D  + +++ M  N   P+  T   
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G LQ      D +    C+P V+  T+LI   ++  ++     L + ML + 
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVY-------------------------------- 151
            I + + Y+ ++    K   +E A  +Y                                
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYG 640

Query: 152 -------------------EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
                              + M   G   N  VY   I  +C+ GK++EA  +  +M   
Sbjct: 641 ALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER 700

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P   T++ LI+   K KR++ +L    +M+     P+   + EMI  LC+ G   +A
Sbjct: 701 GYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++++  +KG  PN +TY+ +I G+ K G++ + L+L  +M  K  +P    Y  LI+ 
Sbjct: 761 YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINH 820

Query: 313 LCQCGKLEEADKYFKIMK 330
            C  G L++A +    MK
Sbjct: 821 CCAAGLLDDAHQLLDEMK 838



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 164/381 (43%), Gaps = 48/381 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A+ V R +   GF++   +    +H++ K+ R    WR    ++E   +  +  I T
Sbjct: 248 LDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR----WREALALIEKEEFKLDTVIYT 303

Query: 64  -LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEER--------IEE 111
            +IS LC+    +  +D L R+    C P V+    L+   LR  Q  R        I E
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE 363

Query: 112 GMVLLKRMLRKNMIHD-------TIAYSL-------------IVYAKV-----------K 140
           G    +R+   ++IH        + AY L             +VY  +            
Sbjct: 364 GCYPSRRIF-NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS 422

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           +  LE A   Y EML      N    +      C  GK E+A  +++EM + G  P   T
Sbjct: 423 LDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTST 482

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ +I     A +++ +    E+M S  ++P    +  +I   C+ G  +QA       +
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G +PN +TY+ LI  Y K  ++    +L+  M  +   P +  YT+LI   C+ G++E
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIE 602

Query: 321 EADKYFKIMKSHSLVPGVDIY 341
           +A + +  M+ ++ +P VD+Y
Sbjct: 603 KACQIYARMRGNADIPDVDMY 623



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 139/349 (39%), Gaps = 45/349 (12%)

Query: 44  RIYQHMLENIRYPNEATIRTLISAL----CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           R+ +  L  IR  ++  +  L++ L    C+ G     ++ L R+      P  +   +L
Sbjct: 179 RVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNAL 238

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +   ++ +R++   ++ + M       D       V+   K      AL + E   K  F
Sbjct: 239 VRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KEEF 295

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             ++ +YT  I   CE    EEA   +  M ++   P   T+ +L+ GC + +++     
Sbjct: 296 KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKR 355

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
               M++    PS   FN +I   C  G+   A  +L    D G  P  + Y+ LIGG  
Sbjct: 356 ILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC 415

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK-YFKIMKSHSLVPGV 338
              ++                P+L               LE A+K Y +++ +H ++  V
Sbjct: 416 GNEKL----------------PSLDV-------------LELAEKAYGEMLDAHVVLNKV 446

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS-------YLCSAS 380
           ++  +L       G   KA  +  EM+S+G  P TS        LC+AS
Sbjct: 447 NV-SNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 132/314 (42%), Gaps = 14/314 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +   G   + I ++ LI    K  + D    ++  M E    PN  T  +LI 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  +L   + +L R+    C+P VI+ T +I  + +  + +E   L+  M  K    
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K   ++  L +  +M  +G + N   Y   I   C  G +++A+ L+
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM+      +   +  +IEG  +   I  SL   +++     +P   A+  +I   C+ 
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKA 892

Query: 247 GNAKQANGMLTLALDKGFS-------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           G  +     L L L K  S        ++  YS LI   +   ++ +  +LY +M  +  
Sbjct: 893 GRLE-----LALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947

Query: 300 SPTLPAYTSLISSL 313
            P L  +  L+  L
Sbjct: 948 IPELSIFFYLVKGL 961


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 162/349 (46%), Gaps = 5/349 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q  F  ++ ++N  ++ + K        +I+  ML     PN  T   ++  LC   +  
Sbjct: 30  QEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTD 89

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++L  +  K  +P   +   L+  + +  +++    L KR+  +  + D I+Y+++ 
Sbjct: 90  AALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSL-DRISYNMLT 148

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM----EN 191
           Y   K   ++ AL V+ EM +     +   Y   +  YC  G++E+A  L++EM    + 
Sbjct: 149 YGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKG 208

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + + P   ++N +I G  KA+++  +     +M+     P+   FN ++  LC  G   +
Sbjct: 209 SDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDE 268

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           AN M    +++   P  +TY+ LI G+A+   I +    + +M  + + P +  YT+LI 
Sbjct: 269 ANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIG 328

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
            LC   K+E+A +  K M S    P V  Y  ++G   + G   +A  L
Sbjct: 329 GLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKL 377



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 177/379 (46%), Gaps = 20/379 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-----LENIRYPNEA 59
           + A ++ + +E +  + +    N L+  + K+ + D  + +Y+ +     L+ I Y    
Sbjct: 89  DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISY---- 144

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               L   LCK  Q+   + +   +      P ++    L+    +  R+E+ M LL+ M
Sbjct: 145 --NMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEM 202

Query: 120 LR----KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +      +++ D  +Y+ ++    K R L +A  V   M+K G S N   + T +   C 
Sbjct: 203 IEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCL 262

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK++EAN + + M     +P   T+ +LI G A+A RI+++  Y   M+ R + P+   
Sbjct: 263 TGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYT 322

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I  LC+    + A  +L      G  PN +TY+ +IG   K G+I+   KL+ +  
Sbjct: 323 YTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAM 382

Query: 296 YKSISPTLP---AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEK 351
               +   P   AY+++I  LC+  K  EA +YF  M    LV    IY+++  G+ L +
Sbjct: 383 GSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQ 442

Query: 352 GNKAKALHLCEEMVSEGLK 370
             + K   +C E  + G++
Sbjct: 443 ETE-KVERVCLEASAHGIE 460



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 156/347 (44%), Gaps = 23/347 (6%)

Query: 48  HMLENIRYPNEA------------------TIRTLISALCKGGQLQTYVDMLDRIHGKRC 89
           H+LENI+ P  A                  T    ++AL KGG       + D +  K C
Sbjct: 9   HVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKEC 68

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
            P +     ++  +  + + +  + LL+ M  K +   T   +++V    K   +++A  
Sbjct: 69  LPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYE 128

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +Y+  L    S +   Y       C+  +I+ A  +  EME   + P   T+N L+ G  
Sbjct: 129 LYKR-LSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYC 187

Query: 210 KAKRIEESLSYCEQMMSRK----LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +A R+E++++  E+M+  K    ++P   ++N +I   C+      A  +L   +  G S
Sbjct: 188 RAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCS 247

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN +T++ L+ G    G++ E   ++  M  ++  PT   YT LI+   +  ++++A+ Y
Sbjct: 248 PNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDY 307

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           F  M    + P V  Y +L+G   +      AL + + M S G +P+
Sbjct: 308 FVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPN 354


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 165/357 (46%), Gaps = 7/357 (1%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  +  S+N ++ ++   +   +   ++  ML     P   T   ++ A C   ++ +  
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
            +L  +    C P  I+   LI  + +  R+ E M LL+ M       D   ++ +++  
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K   +  A  +++ ML R F+A++ +    +   C  GK++EA  ++ ++ N    P  
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNT 336

Query: 199 ETFNLLIEGCAKAKRIEES--LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
             +N LI G   + R EE+  L Y + M+     P    FN MI  LC+ G    A   L
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLY-KNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              + KGF PN ITY+ LI G+ K+G  +E  K+   M  K +S     Y  LI +LC+ 
Sbjct: 396 DEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKD 455

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           GK+++A + +  M S    P +  + SL+    +     +AL L  +M+ EG+  +T
Sbjct: 456 GKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANT 512



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 174/365 (47%), Gaps = 5/365 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA +V   +  RG S ++ +F  ++      +  D    + + M ++   PN    + L
Sbjct: 182 KVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQML 241

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I AL +  ++   + +L+ +    C P V     +I  + +  RI E   L  RML ++ 
Sbjct: 242 IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-N 183
             D +    +++   +M  ++ A      ML +  + N+ +Y T I  Y   G+ EEA +
Sbjct: 302 TADALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKD 357

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L + M  AG +P   TFN++I+G  K   +  +L + ++M+ +   P+   +  +I   
Sbjct: 358 LLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+ ++A+ ++     KG S N + Y+ LIG   K+G+IQ+ L++Y EM  K   P +
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             + SLI  LC+  K+EEA   ++ M    ++     Y +L+   L      +A  L  E
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537

Query: 364 MVSEG 368
           M   G
Sbjct: 538 MRFRG 542



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 145/328 (44%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF     +FN +I  + K             M++    PN  T   LI   CK G  +  
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +++ +  K  S   +    LI  + ++ +I++ + +   M  K    D   ++ ++Y 
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +E AL +Y +ML  G  AN+  Y T I A+     I++A+ L+ EM   G    
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           + T+N LI+   K    E+ L   EQM   ++ PS ++ N +I   C  G    A   L 
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + +G +P+ +TY+ LI G  K G  QE L L+  ++ K I P    Y +LIS  C  G
Sbjct: 607 DMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEG 666

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLV 345
              +A +      S+  +P    +  L+
Sbjct: 667 LFNDACQLLFKGVSNGFIPNEITWSILI 694



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 170/353 (48%), Gaps = 7/353 (1%)

Query: 24  ISFNTLIHVVTKSDR----NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           + +NTLI+    S R     DL   +Y++M+     P+  T   +I  LCK G L + ++
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDL---LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
            LD +  K   P VI  T LI    ++   EE   ++  M  K +  +T+ Y+ ++ A  
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   ++ AL +Y EM  +G   + + + + I   C+  K+EEA  L ++M   G+     
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+N LI    + + I+++     +M  R        +N +I+ LC+ G  ++  G++   
Sbjct: 514 TYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQM 573

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             +   P+  + + LI  + + G++ + L+   +M  + ++P +  Y SLI+ LC+ G+ 
Sbjct: 574 FGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRF 633

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +EA   F  +++  + P    Y +L+  +  +G    A  L  + VS G  P+
Sbjct: 634 QEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPN 686



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 142/296 (47%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++GF  ++I++  LI    K    +   ++   M       N      LI ALCK G++Q
Sbjct: 400 KKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQ 459

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + M   +  K C P +    SLI  + + +++EE + L + ML + +I +T+ Y+ ++
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +A +++  ++ A  +  EM  RG   ++  Y   I A C+ G  E+   L+++M    + 
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   + N+LI    +  ++ ++L +   M+ R L P    +N +I  LC+ G  ++A  +
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
                 KG  P+ +TY+ LI  Y  EG   +  +L ++       P    ++ LI+
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 35/273 (12%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G    + +FN+LI+ + K+D+ +    +Y+ ML      N  T  TLI A  +   
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q    ++  +  + C    I    LI  + +    E+ + L+++M  + +     + ++
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ +  +   +  AL    +M++RG + +   Y + I   C+ G+ +EA  L   ++  G
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N LI                                    R C  G    A 
Sbjct: 648 IHPDAVTYNTLIS-----------------------------------RYCYEGLFNDAC 672

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
            +L   +  GF PNEIT+S LI  + K     E
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYFVKNNSDSE 705



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/203 (18%), Positives = 80/203 (39%), Gaps = 35/203 (17%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  L  I++N LI  + K+   +    + + M     +P+  +   LI++ C+ G    
Sbjct: 541 RGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG---- 596

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
                                          ++ + +  L+ M+++ +  D + Y+ ++ 
Sbjct: 597 -------------------------------KVNDALQFLRDMIQRGLTPDIVTYNSLIN 625

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              KM   + AL ++  +  +G   ++  Y T I  YC  G   +A  L+ +  + G  P
Sbjct: 626 GLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIP 685

Query: 197 YDETFNLLIEGCAKAKRIEESLS 219
            + T+++LI    K     E  +
Sbjct: 686 NEITWSILINYFVKNNSDSEQFT 708


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 175/404 (43%), Gaps = 38/404 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRT 63
           E+ F    +  +R    S ++ N +I ++ K D  D  W+I + +   NI+ P   T   
Sbjct: 78  ELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIP-PPTFSV 136

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+A  K G  +  V+   ++    C P V    S++  ++Q+E     + +  +ML+ N
Sbjct: 137 LIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN 196

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT---------------- 167
              +   + +++    K    + AL +++EM ++G   N+ +YT                
Sbjct: 197 YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVH 256

Query: 168 -------------------TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
                                +  +C+ G+I+EA  L+Q  E  G     + ++ LI+G 
Sbjct: 257 RLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL 316

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +AKR +E   +C +M    + P    +  +IR  CE G    A  ML     +G SP+ 
Sbjct: 317 FRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDT 376

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             Y+ LI G+   G + +   L  E+      PT   YT LI  +C+ G L+EA + F  
Sbjct: 377 YCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQ 436

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M++    P +  + +L+    + G   +A HL  +M   G  PS
Sbjct: 437 MENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPS 479



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 170/369 (46%), Gaps = 15/369 (4%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    + ++N+++HV+ + +   L   +Y  ML+    PN AT   L++ LCK G+    
Sbjct: 161 GCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDA 220

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + M D +  K   P  ++ T ++  + Q +R ++   LL  M       D+I  + ++  
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A  + +   K G+      Y++ I       + +E     ++M  AG++P 
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM-L 256
              + +LI G  +   ++ +L+    M  R L P    +N +I+  C+ G   +A  + L
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            ++ +  F P   TY+ LI G  + G + E  +++ +ME    SP++  + +LI  LC+ 
Sbjct: 401 EISKNDCF-PTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKA 459

Query: 317 GKLEEADKYF---KIMKSHSLV----PGVD------IYESLVGIHLEKGNKAKALHLCEE 363
           G+LEEA   F   +I K+ SL      G D        +++V    E G   KA  L  +
Sbjct: 460 GELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQ 519

Query: 364 MVSEGLKPS 372
           +   G+ P 
Sbjct: 520 LADSGVVPD 528



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 165/396 (41%), Gaps = 50/396 (12%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q+G   + + +  ++  + ++ R D V R+   M  +   P+  T   L+   CK GQ
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L     +     +   +SLI  + + +R +E     ++M +  +  D + Y++
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTI 346

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL-------- 185
           ++    ++  ++ AL +  +M +RG S +++ Y   I  +C+ G +++A  L        
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406

Query: 186 ---------------------------MQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
                                        +MEN G  P   TFN LI+G  KA  +EE+ 
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466

Query: 219 SYCEQMMSRKLLPS--------------CSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
               +M   K  PS               ++   M+ RLCE G   +A  +L    D G 
Sbjct: 467 HLFYKMEIGKN-PSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ +TY+ LI G+ K   I    KL+ E++ K  SP    Y +LI    +  + E+A +
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
               M  +   P   +Y+ L+     KG  + A  L
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSL 621



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 125/316 (39%), Gaps = 61/316 (19%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP------ 56
           L + A  +   +E  G S S+++FN LI  + K+   +    ++  M E  + P      
Sbjct: 426 LLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRL 484

Query: 57  --------NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
                   + A+++T++  LC+ G +     +L ++      P ++    LI    + + 
Sbjct: 485 SQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKN 544

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I     L + +  K    D++ Y  ++    ++   E A  V ++M+K G + +S VY  
Sbjct: 545 INGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKC 604

Query: 169 FIGAYCEYGKIEEANCL-------MQEMENAGLKPYDETF-------------------- 201
            +   C  GK+  A  L       +   E+  LK  +E F                    
Sbjct: 605 LMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLN 664

Query: 202 -------NLLIEGCAKAKRIEESLSY------CEQMMSRKLLPSCSAFNEMIRRLCECGN 248
                   + + G  +A+R EE+L        C+  ++    PSC     +I  LC+ GN
Sbjct: 665 NFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNP---PSCVM---LINGLCKDGN 718

Query: 249 AKQANGMLTLALDKGF 264
            + A  +    L+KGF
Sbjct: 719 LEMAVDIFLYTLEKGF 734


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 184/408 (45%), Gaps = 40/408 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE+ F+  +     G+ LS +S   L+  + K +R+  V  +Y+ M+     PN  T   
Sbjct: 169 FELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNV 228

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRML 120
           +I+ALCK G++    D+++ +    CSP V+   +LI    ++    ++ +   +LK M+
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             ++  +   +++++    K  NL  ++ V++EML +    N   Y + I   C  GKI 
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL---------------------- 218
           EA  +  +M +AG++P   T+N LI G  K   ++E+L                      
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408

Query: 219 -SYC------------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            +YC            E+M    ++P    +N +I  LC  GN + A  +      KG  
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ +T+  L+ GY ++GE ++   L  EM    + P    Y  ++   C+ G L+ A   
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527

Query: 326 FKIM-KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M K   L   V  Y  L+  + +KG    A  L  EM+ +GL P+
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 177/384 (46%), Gaps = 30/384 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRT 63
           A DV   ++  G S +++S+NTLI    K   N  +++   + + M+EN   PN  T   
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301

Query: 64  LISALCKG----GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           LI    K     G ++ + +MLD+       P VI   SLI  +    +I E + +  +M
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQ----DVKPNVISYNSLINGLCNGGKISEAISMRDKM 357

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           +   +  + I Y+ ++    K   L+ AL ++  +  +G    + +Y   I AYC+ GKI
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           ++   L +EME  G+ P   T+N LI G  +   IE +    +Q+ S K LP    F+ +
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHIL 476

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY-KS 298
           +   C  G +++A  +L      G  P  +TY+ ++ GY KEG ++    +  +ME  + 
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +   + +Y  L+    Q GKLE+A+     M    LVP    YE +              
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK------------- 583

Query: 359 HLCEEMVSEGLKPST-SYLCSAST 381
              EEMV +G  P    +L + ST
Sbjct: 584 ---EEMVDQGFVPDIEGHLFNVST 604



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 10/290 (3%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           C P++I        +++E R  +   + K M+R+ +  +   +++++ A  K   +  A 
Sbjct: 191 CKPLMIA-------LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYG---KIEEANCLMQEMENAGLKPYDETFNLLI 205
            V E+M   G S N   Y T I  YC+ G   K+ +A+ +++EM    + P   TFN+LI
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G  K   +  S+   ++M+ + + P+  ++N +I  LC  G   +A  M    +  G  
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN ITY+ LI G+ K   ++E L ++  ++ +   PT   Y  LI + C+ GK+++    
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            + M+   +VP V  Y  L+      GN   A  L +++ S+GL    ++
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTF 473



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 158/355 (44%), Gaps = 19/355 (5%)

Query: 40  DLVWRIYQHMLENIRYPNEATIRTLISALCKGG---QLQTY---VDMLDRIHGKRCSPMV 93
           +L +++   +    RY   + IR+ +    + G   Q+ +    + M D +    C   +
Sbjct: 102 ELTFKLLHSLANAKRY---SKIRSFLDGFVRNGSDHQVHSIFHAISMCDNV----CVNSI 154

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
           I +  L+L      R E G    KR          ++   ++ A +K         VY+E
Sbjct: 155 IADM-LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK--- 210
           M++R    N F +   I A C+ GK+ +A  +M++M+  G  P   ++N LI+G  K   
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
             ++ ++ +  ++M+   + P+ + FN +I    +  N   +  +    LD+   PN I+
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI G    G+I E + +  +M    + P L  Y +LI+  C+   L+EA   F  +K
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLC-SASTCR 383
               VP   +Y  L+  + + G       L EEM  EG+ P   +Y C  A  CR
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 136/278 (48%), Gaps = 2/278 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           ++IS+N+LI+ +    +      +   M+     PN  T   LI+  CK   L+  +DM 
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             + G+   P   +   LI    +  +I++G  L + M R+ ++ D   Y+ ++    + 
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+E+A  +++++  +G   +   +   +  YC  G+  +A  L++EM   GLKP   T+
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 202 NLLIEGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           N++++G  K   ++ + +   QM   R+L  + +++N +++   + G  + AN +L   L
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +KG  PN ITY  +      +G + ++    + +  KS
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 179/375 (47%), Gaps = 6/375 (1%)

Query: 9   DVCRYLEQR---GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           DV +  E+    G    +I F   I  + K  R     ++   M++    PN  T   LI
Sbjct: 203 DVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLI 262

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK G ++  + + + +  K  +P V+   +LI  +     ++  M LL+ M++ + +
Sbjct: 263 NCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTL 322

Query: 126 --HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + ++ +++   K+  +  A+ V E M +RG   N   Y   IG +    K+  A 
Sbjct: 323 VEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAM 382

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            LM E+ ++GL+P   T+++LI G +K   ++ +  +   M  R +      +  ++  L
Sbjct: 383 NLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAAL 442

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  +QA  +    +D     + + YS ++ G  K G+I+   +L  +M  + ++P  
Sbjct: 443 CQLGMMEQAMVLFN-EMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDA 501

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI+   + G LEEA++  K M +   VP V +++SL+  +  +G   K L L  E
Sbjct: 502 VTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHE 561

Query: 364 MVSEGLKPSTSYLCS 378
           M ++ +     ++C+
Sbjct: 562 MRAKNVAIDPKFICT 576



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 6/316 (1%)

Query: 64  LISALCK-GGQLQTYVDML---DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           +++ALC+ GG L+  + +L    R       P  +  T ++  +    R +E + LL+ M
Sbjct: 82  VLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSM 141

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               +  D + Y  ++        L+ AL +  EM   G   N  VY+  +  YC  G+ 
Sbjct: 142 QASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRW 201

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           ++ + + +EM   G++P    F   I+   K  RI +++   + M+ R L P+   +N +
Sbjct: 202 QDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVL 261

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS- 298
           I  LC+ G+ ++A  +     DKG +P+ +TY+ LI G +   E+   + L  EM     
Sbjct: 262 INCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDT 321

Query: 299 -ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P +  + S+I  LC+ G++ +A    ++M     +  +  Y  L+G  L       A
Sbjct: 322 LVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMA 381

Query: 358 LHLCEEMVSEGLKPST 373
           ++L  E++S GL+P +
Sbjct: 382 MNLMSELISSGLEPDS 397



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 162/387 (41%), Gaps = 38/387 (9%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S+  ++  +  S R D    + + M  +    +  T  TLI  LC   +L   +++L  
Sbjct: 116 VSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGE 175

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + G    P VIV + L+    +  R ++   + + M R  +  D I ++  +    K   
Sbjct: 176 MCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGR 235

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A+ V + M++RG   N   Y   I   C+ G + EA  L  EM++ G+ P   T+N 
Sbjct: 236 IGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNT 295

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLL--PSCSAFNEMIRRLCECGNAKQA--------- 252
           LI G +    ++ ++   E+M+    L  P    FN +I  LC+ G  +QA         
Sbjct: 296 LIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAE 355

Query: 253 --------------NGMLTL------------ALDKGFSPNEITYSHLIGGYAKEGEIQE 286
                          G L +             +  G  P+  TYS LI G++K  E+  
Sbjct: 356 RGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDR 415

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
                  M  + I   L  Y  L+++LCQ G +E+A   F  M  +  +  V  Y +++ 
Sbjct: 416 AEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAV-AYSTMMY 474

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
              + G+   A  L ++M+ EGL P  
Sbjct: 475 GACKSGDIKAAKQLLQDMLDEGLAPDA 501


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 107 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 160

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 161 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 190

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 250

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ LLP    +N +I  LC+ G+  QA+G++     KG  P++ TY+ LI G  
Sbjct: 251 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCC 310

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT++IS LCQ G+  +A+K  + M S  L P   
Sbjct: 311 KEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTG 370

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM   G  PS
Sbjct: 371 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPS 403



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 146/312 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 102 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 161

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 162 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 221

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y T I   C+ G + 
Sbjct: 222 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLN 281

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 282 QAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAII 341

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G    A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 342 SGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHV 401

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 402 PSVXTYNVLMNG 413



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 111/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K+R  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 100 MKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 159

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN +   
Sbjct: 160 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 219

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 220 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 279

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L +A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 280 LNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIR 331



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + +   AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 6   TMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 65

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K +  +    + E+++      S 
Sbjct: 66  ESGFLRDAIECYRLTREHKLWVPFD-TCRKVLEHLMKLRYFKLVWGFYEEILECGYPASL 124

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 125 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 184

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 185 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 244

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 245 VDLAMEIYKQMLSQSLLPD 263


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 175/380 (46%), Gaps = 36/380 (9%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI-RTLISALCKG 71
           ++++ GF  SL S N +++ +   ++++ VW   +  L+  ++P + T    ++++LC  
Sbjct: 185 FMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR-KFPLDVTTCNIVLNSLCTQ 243

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSL-----------ILRIIQE-------------- 106
           G+L     ML ++   R    V  NT L            LRI+ +              
Sbjct: 244 GKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYN 303

Query: 107 ---------ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
                    +R     +LLKRM   N+  D  +Y+ +++       +  A+ ++ +ML++
Sbjct: 304 IMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQ 363

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
               +   YT  I  YC  G+ +EA  ++ EM+  G++P + T++ L+ G  K  ++  +
Sbjct: 364 SLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPA 423

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           L   + + SR +  + + +  +I   C+ G   +A  +L   L  G  P+ ITYS LI G
Sbjct: 424 LDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALING 483

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             K G I E  ++   M+   + P    YT+L+   C+ G  +EA KYF  +    LV  
Sbjct: 484 MCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVAN 543

Query: 338 VDIYESLVGIHLEKGNKAKA 357
             I+ +L+     +G  A+A
Sbjct: 544 SVIHNALLCSFYREGMIAEA 563



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 167/357 (46%), Gaps = 1/357 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    +I+++ LI+ + K         I   M ++   PN     TL+   CK G  +  
Sbjct: 469 GIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEA 528

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +     I+        +++ +L+    +E  I E     + M R  +  D  +++ I+ +
Sbjct: 529 LKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDS 588

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +  N+  A  VY+ M++ G+  +   Y + +   C+ G + +A   M  +        
Sbjct: 589 YCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAID 648

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           ++T N L+ G  K   ++E+L  CE+M++R +LP    +  ++   C+ G    A  +L 
Sbjct: 649 EKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQ 708

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK-SISPTLPAYTSLISSLCQC 316
           + L+KG  P+ I Y+ L+ G   EG+++    ++ E+  K  +     AY S+++   + 
Sbjct: 709 MMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKG 768

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G++ E ++  + M  + + P    Y  L+  +++KG  ++ L+L  +MV EG+KP  
Sbjct: 769 GQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDN 825



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 168/402 (41%), Gaps = 35/402 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +   +E+ G    L ++N +I  + K  R+   + + + M E    P+E +  TLI 
Sbjct: 283 ALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIH 342

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G++   + + +++  +   P V   T+LI    +  R +E   +L  M    +  
Sbjct: 343 GFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRP 402

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + YS ++    K   L  AL + + +  R  S N  +YT  I  +C+ G++ +A  ++
Sbjct: 403 SELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQIL 462

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G+ P   T++ LI G  K   I E+     +M    +LP+   +  ++   C+ 
Sbjct: 463 KCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 522

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+AK+A          G   N + ++ L+  + +EG I E  +    M    IS  + ++
Sbjct: 523 GHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASF 582

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-----GIHL------------ 349
             +I S CQ G + EA   +  M  H   P +  Y SL+     G HL            
Sbjct: 583 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642

Query: 350 ------------------EKGNKAKALHLCEEMVSEGLKPST 373
                             + G   +AL LCE+MV+  + P T
Sbjct: 643 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 684



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 168/383 (43%), Gaps = 17/383 (4%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A D+C  +  R       ++  L+    K  +      + Q MLE    P+      L++
Sbjct: 668  ALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLN 727

Query: 67   ALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L   GQ++    M   I  K       I   S++   ++  +I E   L++ M    + 
Sbjct: 728  GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 787

Query: 126  HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + +Y+++++  +K   L   L +Y +M+K G   ++  Y   I   CEYG IE A   
Sbjct: 788  PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF 847

Query: 186  MQEMENAGLKPYDETFNLLIEGCAKAKRIEESL---SYC-------------EQMMSRKL 229
            +++M   G+ P +  F++LI+  ++  ++  +L   SY              E M +  +
Sbjct: 848  LEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGV 907

Query: 230  LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            +PS  A + ++R LC+CG  ++A  + +  +  G  P   T++ L+ G  KE +I +   
Sbjct: 908  VPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFH 967

Query: 290  LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
            L   ME   +   +  Y  LI+ LC    + +A   ++ MKS  L+P +  Y +L G   
Sbjct: 968  LKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMY 1027

Query: 350  EKGNKAKALHLCEEMVSEGLKPS 372
              G       L +++   G+ PS
Sbjct: 1028 ATGTMQDGEKLLKDIEDRGIVPS 1050



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 38/385 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRI-YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           S+ ++  LI    ++ R D   R+ Y+  +  +R P+E T   L++  CK  +L   +D+
Sbjct: 368 SVATYTALIDGYCRNGRTDEARRVLYEMQITGVR-PSELTYSALLNGYCKHSKLGPALDL 426

Query: 81  LDRIHGKRCS-----------------------------------PMVIVNTSLILRIIQ 105
           +  +  +  S                                   P VI  ++LI  + +
Sbjct: 427 IKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCK 486

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
              I E   +L RM +  ++ + + Y+ +V+   K  + + AL  + ++ + G  ANS +
Sbjct: 487 MGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVI 546

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           +   + ++   G I EA    Q M    +     +FN +I+   +   + E+ S  + M+
Sbjct: 547 HNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMV 606

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                P    +  ++R LC+ G+  QA   +   L+K  + +E T + L+ G  K G + 
Sbjct: 607 RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLD 666

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E L L  +M  ++I P    YT L+   C+ GK+  A    ++M    LVP    Y  L+
Sbjct: 667 EALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLL 726

Query: 346 GIHLEKGNKAKALHLCEEMV-SEGL 369
              + +G    A ++ +E++  EGL
Sbjct: 727 NGLVNEGQVKAASYMFQEIICKEGL 751



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/349 (19%), Positives = 152/349 (43%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++NT+++   K  R     RI   M +N    +  T   +I  LCK  +      +L R
Sbjct: 265 VTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKR 324

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +     +P      +LI     E +I   + +  +MLR+++      Y+ ++    +   
Sbjct: 325 MREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGR 384

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            + A  V  EM   G   +   Y+  +  YC++ K+  A  L++ + +  +      + +
Sbjct: 385 TDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTI 444

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  +   + ++    + M++  + P    ++ +I  +C+ G   +   +L+     G
Sbjct: 445 LIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 504

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN + Y+ L+  + K G  +E LK + ++    +      + +L+ S  + G + EA+
Sbjct: 505 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 564

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++ + M    +   V  +  ++  + ++GN  +A  + + MV  G  P 
Sbjct: 565 QFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPD 613



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 1/220 (0%)

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           + R    N F     + AY + GK+ +A   +  M+  G K    + N ++       + 
Sbjct: 152 ISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKS 211

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           E    + ++ + RK     +  N ++  LC  G   +A  ML   +     PN +TY+ +
Sbjct: 212 EYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQ-KMKNCRLPNAVTYNTI 270

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           +  Y K+G  +  L++  +ME   I   L  Y  +I  LC+  +   A    K M+  +L
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            P    Y +L+     +G    A+++  +M+ + LKPS +
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVA 370


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 175/404 (43%), Gaps = 38/404 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRT 63
           E+ F    +  +R    S ++ N +I ++ K D  D  W+I + +   NI+ P   T   
Sbjct: 78  ELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIP-PPTFSV 136

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+A  K G  +  V+   ++    C P V    S++  ++Q+E     + +  +ML+ N
Sbjct: 137 LIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN 196

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT---------------- 167
              +   + +++    K    + AL +++EM ++G   N+ +YT                
Sbjct: 197 YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVH 256

Query: 168 -------------------TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
                                +  +C+ G+I+EA  L+Q  E  G     + ++ LI+G 
Sbjct: 257 RLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL 316

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +AKR +E   +C +M    + P    +  +IR  CE G    A  ML     +G SP+ 
Sbjct: 317 FRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDT 376

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             Y+ LI G+   G + +   L  E+      PT   YT LI  +C+ G L+EA + F  
Sbjct: 377 YCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQ 436

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M++    P +  + +L+    + G   +A HL  +M   G  PS
Sbjct: 437 MENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPS 479



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 179/377 (47%), Gaps = 13/377 (3%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    + ++N+++HV+ + +   L   +Y  ML+    PN AT   L++ LCK G+    
Sbjct: 161 GCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDA 220

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + M D +  K   P  ++ T ++  + Q +R ++   LL  M       D+I  + ++  
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A  + +   K G+      Y++ I       + +E     ++M  AG++P 
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM-L 256
              + +LI G  +   ++ +L+    M  R L P    +N +I+  C+ G   +A  + L
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            ++ +  F P   TY+ LI G  + G + E  +++ +ME    SP++  + +LI  LC+ 
Sbjct: 401 EISKNDCF-PTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKA 459

Query: 317 GKLEEADKYF---KIMKSHSLV----PGVD-IYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           G+LEEA   F   +I K+ SL      G D + ++  G H     +  A  + ++MV  G
Sbjct: 460 GELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFH-RVDREEDAFRVLDQMVKNG 518

Query: 369 LKPSTS-YLCSAS-TCR 383
             PS++ Y C  + +CR
Sbjct: 519 CTPSSAVYKCLMTWSCR 535



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/269 (20%), Positives = 109/269 (40%)

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           ++ R E G        R+      + ++L++    K    ++   + EE+          
Sbjct: 73  EQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPP 132

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            ++  I AY + G  E+A     +M++ G KP   T+N ++    + +    +L+   QM
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +     P+ + F  ++  LC+ G    A  M      KG  PN + Y+ ++ G  +    
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +V +L   M+     P      +L+   C+ G+++EA    ++ +    V G+  Y SL
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +          +    C +M   G++P  
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDV 341



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/394 (19%), Positives = 150/394 (38%), Gaps = 78/394 (19%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q+G   + + +  ++  + ++ R D V R+   M  +   P+  T   L+   CK GQ
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L     +     +   +SLI  + + +R +E     ++M +  +  D + Y++
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTI 346

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL-------- 185
           ++    ++  ++ AL +  +M +RG S +++ Y   I  +C+ G +++A  L        
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406

Query: 186 ---------------------------MQEMENAGLKPYDETFNLLIEGCAKAKRIEES- 217
                                        +MEN G  P   TFN LI+G  KA  +EE+ 
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466

Query: 218 -----------------------------------------LSYCEQMMSRKLLPSCSAF 236
                                                        +QM+     PS + +
Sbjct: 467 HLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVY 526

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             ++   C  G    A   L L   +     E     L   + ++GE+++ ++   EM +
Sbjct: 527 KCLMTWSCRKGKLSVAFS-LWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNF 585

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           K  +  +  YT  +  LCQ  + EEA K F ++K
Sbjct: 586 KLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLK 619


>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
 gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
          Length = 546

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           +P ++    L+  ++    ++  + +L  M    ++ D + Y+ ++ A     +LE A  
Sbjct: 201 TPNLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQ 260

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++++++  G   ++ +YT  +  YC  GK+++A  +M EME AG+KP + T++++IE C 
Sbjct: 261 LFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACC 320

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  +  E+     +M+    +P      +++  LC+ G A +AN +    + K   P+  
Sbjct: 321 KEGKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNT 380

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
             S LI    K G +QE   L+ E+E +   P+L  Y SLI  LC+ G+L+EA + +  M
Sbjct: 381 VVSTLIYWLCKNGMVQEARGLFDELE-RGFVPSLLTYNSLIIGLCENGELQEAGRVWDDM 439

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 P    YE+L+    + G   +   L +EMV++G  PS
Sbjct: 440 VERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPS 482



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 133/294 (45%), Gaps = 1/294 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L+S N L+  +      D   ++   M      P+  T  T+++A C  G L+    + 
Sbjct: 203 NLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLF 262

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D I      P   + T L+       ++++   ++  M    +  + + YS+++ A  K 
Sbjct: 263 DDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKE 322

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  +  EML  G+  ++ +    +   C+ GK  EAN + ++M    + P +   
Sbjct: 323 GKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVV 382

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           + LI    K   ++E+    +++  R  +PS   +N +I  LCE G  ++A  +    ++
Sbjct: 383 STLIYWLCKNGMVQEARGLFDEL-ERGFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVE 441

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           + + PN +TY  LI G+ K G+  E   L+ EM  K  +P+   Y +L+ SL +
Sbjct: 442 RRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALVDSLSE 495



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/272 (19%), Positives = 118/272 (43%), Gaps = 1/272 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  V   +   G    ++++ T++         +   +++  ++ + R P+      
Sbjct: 220 LDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTV 279

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   C  G+LQ    ++D +      P  +  + +I    +E +  E   L + ML   
Sbjct: 280 LVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDLTREMLGAG 339

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + DT   + +V    +      A  ++ +M+K+    ++ V +T I   C+ G ++EA 
Sbjct: 340 YVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCKNGMVQEAR 399

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  E+E  G  P   T+N LI G  +   ++E+    + M+ R+  P+   +  +I+  
Sbjct: 400 GLFDELER-GFVPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGF 458

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           C+ G + +   +    + KG +P++  Y  L+
Sbjct: 459 CKIGKSNEGYALFKEMVAKGCTPSKFLYQALV 490



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 80/177 (45%)

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L++G      ++ +L   ++M    ++P    +  ++   C  G+ + A  +    + 
Sbjct: 208 NILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVA 267

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+   Y+ L+ GY   G++Q+  ++  EME   + P    Y+ +I + C+ GK  E
Sbjct: 268 SGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIE 327

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A    + M     VP   +   +V +  + G   +A  +  +MV + + P  + + +
Sbjct: 328 ACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVST 384



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 1/150 (0%)

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           + P+  + N +++ L   G+   A  +L      G  P+ +TY+ ++  Y  +G+++   
Sbjct: 200 ITPNLVSCNILLKGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQ 259

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +L+ ++      P    YT L+   C  GKL++A +    M++  + P    Y  ++   
Sbjct: 260 QLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEAC 319

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            ++G   +A  L  EM+  G  P T  LC+
Sbjct: 320 CKEGKSIEACDLTREMLGAGYVPDTP-LCA 348


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 149/318 (46%), Gaps = 4/318 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T+  LI+A  +G +     D+ ++     CSP V   T LI  ++     E   ++
Sbjct: 30  PN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELV 87

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            K++++K    D  AY++++    +   L+SA+ ++ EM  +G   + + Y   + A  +
Sbjct: 88  YKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGK 147

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+++EA      M   GL P   T+NLL++   K  +++ +L    +M  R   PS   
Sbjct: 148 AGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVT 207

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC  G    A  +       G SP+  TYS L+ G  K G ++E  K++ EM 
Sbjct: 208 YNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMV 267

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + ++  L  Y SL+++L + G ++   K  K M      P    + +++   L K NK 
Sbjct: 268 DRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDA-LGKANKP 326

Query: 356 KALH-LCEEMVSEGLKPS 372
            A   +   MV  G KP 
Sbjct: 327 DAAREVFARMVESGCKPD 344



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 173/370 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  V + L Q+G  L   ++N LI    +S + D    +++ M      P+E T   
Sbjct: 81  FERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGF 140

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++AL K G++Q      D +  +  +P +     L+    +  +++  + L   M R+ 
Sbjct: 141 LVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG 200

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                + Y++++ A      + +A  ++ +M   G S +S+ Y+T +    + G++EEA+
Sbjct: 201 FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAH 260

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM + G+      +N L+   AKA  ++      ++M  +   P   +FN ++  L
Sbjct: 261 KVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDAL 320

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            +      A  +    ++ G  P+ I+Y+ LI  YA+ G+  +  ++  EM      P  
Sbjct: 321 GKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPET 380

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SLI  L   G+++EA    + M++    P V  Y  L+ +  ++G   +A  L ++
Sbjct: 381 KTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQ 440

Query: 364 MVSEGLKPST 373
           M  +G++P T
Sbjct: 441 MKDKGVEPDT 450



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 150/316 (47%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG + ++ ++N L+    K  + D+   ++  M      P+  T   L+ ALC  G++ 
Sbjct: 163 ERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVG 222

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +  ++ G  CSP     ++L+  + +  R+EE   + + M+ + +  D + Y+ ++
Sbjct: 223 AARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K  N++    + +EM ++GF  ++F + T + A  +  K + A  +   M  +G K
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK 342

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N+LI+  A+     ++    E+M+    +P    +N +I  L   G   +A  +
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV 402

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L      G  P+ +TY+ L+    K GE Q   +L+ +M+ K + P   +Y   I  L  
Sbjct: 403 LEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF 462

Query: 316 CGKLEEADKYFKIMKS 331
             +L+EA   FK MK+
Sbjct: 463 DDRLDEALVLFKDMKA 478



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 159/366 (43%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+    E    S ++ +F  LI ++  S   +    +Y+ +++     +      LI 
Sbjct: 49  AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIR 108

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              + GQL + ++M   +  K   P       L+  + +  R++E       ML + +  
Sbjct: 109 YFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP 168

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+L++ A  K+  L+ AL ++ EM +RGF  +   Y   + A C  G++  A  L 
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   G  P   T++ L+ G  K+ R+EE+     +M+ R +      +N ++  L + 
Sbjct: 229 HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN  +   ++     KGF P+  +++ ++    K  +     +++  M      P L +Y
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISY 348

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI S  + G   +A +  + M     +P    Y SL+      G   +A  + EEM +
Sbjct: 349 NILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMET 408

Query: 367 EGLKPS 372
            G +P 
Sbjct: 409 AGCRPD 414



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 153/322 (47%), Gaps = 10/322 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++A  +   +++RGF  S++++N L+  +  + R     +++  M  +   P+  T  T
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST 245

Query: 64  LISALCKGGQLQ----TYVDMLDRIHGKRCSPMVIVN-TSLILRIIQEERIEEGMVLLKR 118
           L++ L K G+++     + +M+DR        + +VN  SL+  + +   ++    L+K 
Sbjct: 246 LVNGLGKSGRVEEAHKVFREMVDR-----GVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M RK    D  +++ I+ A  K    ++A  V+  M++ G   +   Y   I +Y  +G 
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGD 360

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
             +A  +++EM  AG  P  +T+N LI   A   +++E+ +  E+M +    P    +N 
Sbjct: 361 AAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR 420

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++  L + G  ++A  +     DKG  P+ ++Y+  I G A +  + E L L+ +M+   
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480

Query: 299 ISPTLPAYTSLISSLCQCGKLE 320
                  Y  LI +  + G  E
Sbjct: 481 CPVDKAMYRILIRAAHRAGDTE 502



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 7/214 (3%)

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
             +G ++    L++EM   G      T   LI    +  +  ++     Q  S    P+ 
Sbjct: 6   ASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTV 65

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
            AF ++I  L   G  ++A  +    + KG   +   Y+ LI  + + G++   ++++ E
Sbjct: 66  HAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFRE 125

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+ K   P    Y  L+++L + G+++EA  +F  M    L P +  Y  L+    + G 
Sbjct: 126 MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQ 185

Query: 354 KAKALHLCEEMVSEGLKPST-------SYLCSAS 380
              AL L  EM   G +PS          LCSA 
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAG 219



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 86/222 (38%)

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
           +EM+  G           I AY    K  +A  L  + E+    P    F  LI+    +
Sbjct: 19  KEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNS 78

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
              E +    ++++ +       A+N +IR     G    A  M      KG  P+E TY
Sbjct: 79  GEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTY 138

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
             L+    K G +QE    +  M  + ++P +P Y  L+ +  + G+L+ A   F  MK 
Sbjct: 139 GFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR 198

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
               P V  Y  L+      G    A  L  +M  +G  P +
Sbjct: 199 RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 141/274 (51%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++   + KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M +  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 143/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++  VL   ML K ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GL P   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L+ G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M    + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LDKG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 123/241 (51%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +++++++ VK   +  A  V++ + K     +   + T +  Y + G ++E   L   M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            +G++P   T+++LI G  K  +++++    ++M+ + L+P+   F  +I   C+ G   
Sbjct: 199 VSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +    L +  SP+ ITY+ LI G  K+G++++   L  EM  K + P    YT+LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLI 318

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+ G LE A +Y K M   ++      Y +L+    ++G    A  +  EM++ GLK
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 378

Query: 371 P 371
           P
Sbjct: 379 P 379



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD       R    S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDAITKWSLRP---SVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++     + D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM+ +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M++  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 4/230 (1%)

Query: 146 SALVVYEEMLKRGFSANS--FVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDETFN 202
           SA  V+  +L+   +  S  +V++  I AY E G + +A  C     E+    P+D T  
Sbjct: 47  SASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFD-TCR 105

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++E   K K  +    + E+ +      S   FN ++    + G  + A  +       
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW 165

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              P+ ++++ L+ GY K G++ E  +L   M+   + P +  Y+ LI+ LC+  K+++A
Sbjct: 166 SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  F  M    LVP    + +L+  H + G    A+ + ++M+S+ L P 
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 35/403 (8%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E   +  R L +RG    ++  N ++  +   ++  +    +  M+ +   PN  T  TL
Sbjct: 222 EKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTL 281

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+  CK  +L     + + +  K   P +++ + LI  + +  ++EEG  L    L + +
Sbjct: 282 INVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGV 341

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + +S I+ A V++ +L  A+ VY  MLK G S N   Y+  I   C  G++ EA  
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  ++   GL+P   T++ LI+G  K++ + +       M+ +  +P     + +I  L 
Sbjct: 402 VFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLS 461

Query: 245 ECGNAKQANGMLTLALDKGFS-----------------------------------PNEI 269
             G   +A      A+ +G +                                   P+ +
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV 521

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ L+ G A++G + E L L++++  K  SP    Y +LI   C+        + FK+M
Sbjct: 522 TYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLM 581

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +S+ + P + IY  L+ +   +G     L L  E++  GL+P 
Sbjct: 582 QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/402 (21%), Positives = 177/402 (44%), Gaps = 30/402 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM----------------- 49
           A D   ++ + G S+S  + + ++ ++  SDR D++   Y+ M                 
Sbjct: 159 AVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKR 218

Query: 50  -------------LENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVN 96
                        +E    P       ++  LC G Q+    D  D +     SP ++  
Sbjct: 219 GEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTF 278

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           ++LI    +E R++E   L   M+ K ++ D + YS+++    +   LE    ++   L 
Sbjct: 279 STLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALA 338

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           RG   +  ++++ + AY   G + +A  +   M   G+ P   T+++LI G  +  R+ E
Sbjct: 339 RGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLE 398

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +     Q++ + L PS   ++ +I   C+  N +   G+  + L KG  P+ +  S LI 
Sbjct: 399 ACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G +++G + E L+ +++   + ++     + +LI    +  +  +  K + +M  + ++P
Sbjct: 459 GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP 518

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            V  Y  LV    E+G   +AL L  +++ +G  P     C+
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 137/282 (48%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+  T L+  + ++ R++E + L  ++L+K    D I Y  ++    K R+  + L +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           ++ M   G   +  +Y   I  +   G +E    L++E+   GL+P   T+N +I G   
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
            K   +++   E +   +  P+   F  +I   C+ G    A  + +  L++G  PN +T
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           YS LI GY K    +   +LY +M    +SP + +Y+ LI  LC+ G +EEA   F+   
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              L+P V  Y  L+  + + G  A+A+ L + M+  G+ P 
Sbjct: 758 GRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 178/443 (40%), Gaps = 71/443 (16%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA D    + + G S +L++F+TLI+V  K  R D  + +Y  M+E    P+      LI
Sbjct: 258 VASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILI 317

Query: 66  SALCKGGQLQ--------------------------TYVDMLD---------RIHGKRCS 90
           + L + G+L+                           YV + D         R+  +  S
Sbjct: 318 NGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGIS 377

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+  + LI  + +  R+ E   +  ++L++ +    + YS ++    K  NL     +
Sbjct: 378 PNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGL 437

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           Y  ML++G   +  V +  I      G ++EA     +    GL   +  FN LI+GC +
Sbjct: 438 YGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR 497

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
            KR  + L     M   K++P    +  +++ L E G   +A  +    L KGFSP+ I 
Sbjct: 498 LKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHII 557

Query: 271 YSHLIGGYAK-----------------------------------EGEIQEVLKLYYEME 295
           Y  LI G+ K                                   EG ++ VL+L  E+ 
Sbjct: 558 YCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREII 617

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              + P +  Y ++I   C      +A K F+++K     P    +  L+  + + G   
Sbjct: 618 KYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMD 677

Query: 356 KALHLCEEMVSEGLKPST-SYLC 377
            A+ +   M+  G +P+  +Y C
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSC 700



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/391 (21%), Positives = 161/391 (41%), Gaps = 35/391 (8%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  + ++ F++++    +         +Y  ML+    PN  T   LI+ LC+ G++  
Sbjct: 339 RGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLE 398

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +  +I  +   P V+  +SLI    + E + +G  L   MLRK  + D +  S+++ 
Sbjct: 399 ACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFV------------------------------- 165
              +   ++ AL  + + +KRG + N+++                               
Sbjct: 459 GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP 518

Query: 166 ----YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
               YT  +    E G+++EA  L  ++   G  P    +  LI+G  K +     L   
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + M S  + P    +N +I      G  +    +L   +  G  P+ +TY+ +I GY   
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSL 638

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
               + +KL+  ++     P    +T LI + C+ G++++A   F  M      P +  Y
Sbjct: 639 KIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTY 698

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             L+  + +  N   A  L E+M+ + + P+
Sbjct: 699 SCLIDGYFKTENTESAFELYEKMLGDRVSPN 729



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 134/281 (47%), Gaps = 2/281 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++  L+  + +  R D    ++  +L+    P+     TLI   CK     T + + 
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +      P + +   LI    +E  +E  + LL+ +++  +  D + Y+ ++     +
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSL 638

Query: 142 RNLESALVVYEEMLKRGFS-ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           +    A+ ++E +LK G +  N+  +T  I AYC+ G++++A  +   M   G +P   T
Sbjct: 639 KIFSKAIKLFE-VLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILT 697

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++ LI+G  K +  E +    E+M+  ++ P+  +++ +I  LC+ G  ++A+     A+
Sbjct: 698 YSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAI 757

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +   P+ I Y  LI GY K G + E + LY  M    I P
Sbjct: 758 GRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP 798



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 8/325 (2%)

Query: 16  QRGFSLSLISFNTLIH--VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +RG +L+   FN LI      K  R+ L   I   M + I  P+  T   L+  L + G+
Sbjct: 478 KRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI--PDVVTYTVLVKGLAEQGR 535

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   + +  ++  K  SP  I+  +LI    ++     G+ + K M    +  D   Y++
Sbjct: 536 LDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNV 595

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +   +E+ L +  E++K G   +   Y T I  YC      +A  L + ++   
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P   TF +LI+   K  R+++++     M+ R   P+   ++ +I    +  N + A 
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAF 715

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    L    SPN ++YS LI G  K+G ++E    +     + + P + AY  LI   
Sbjct: 716 ELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGY 775

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGV 338
           C+ G+L EA     ++  H LV G+
Sbjct: 776 CKVGRLAEA----MMLYDHMLVNGI 796



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 156/370 (42%), Gaps = 22/370 (5%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY---------------PNEATIRT-LISAL 68
           SF  + HV+ +    D   R++  M+                     N +T+ + L+   
Sbjct: 91  SFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCY 150

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G +   VD    +     S      + ++  +I  +RI+   V+L+    + M    
Sbjct: 151 CRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRID---VILENY--EEMCKGL 205

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
             Y  +  + +K   +E  L  +  +++RG           +   C   +I  A+     
Sbjct: 206 GVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M  +G  P   TF+ LI    K  R++E+ S    M+ + ++P    ++ +I  L   G 
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            ++ N + ++AL +G   + + +S ++  Y + G++ + +++Y  M  + ISP +  Y+ 
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI+ LC+ G++ EA   F  +    L P V  Y SL+    +  N      L   M+ +G
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 369 LKPSTSYLCS 378
             P    +CS
Sbjct: 446 HVPDV-VVCS 454



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 6/229 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY---PNEATIRT 63
              + + ++  G    +  +N LI++     R   V  + + + E I+Y   P+  T  T
Sbjct: 574 GLQIFKLMQSNGIFPDICIYNVLINMFF---REGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   C        + + + +   R  P  I  T LI    ++ R+++ M++   ML + 
Sbjct: 631 MICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + YS ++    K  N ESA  +YE+ML    S N   Y+  I   C+ G +EEA+
Sbjct: 691 PEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEAS 750

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
              Q      L P    + +LI G  K  R+ E++   + M+   ++P 
Sbjct: 751 LAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 116/256 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L ++GFS   I + TLI    K        +I++ M  N  +P+      LI+   + G 
Sbjct: 546 LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGC 605

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +++L  I      P ++   ++I      +   + + L + +       + I +++
Sbjct: 606 VENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI 665

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K   ++ A++++  ML+RG   N   Y+  I  Y +    E A  L ++M    
Sbjct: 666 LIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDR 725

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++++LI+G  K   +EE+    +  + R LLP   A+  +IR  C+ G   +A 
Sbjct: 726 VSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAM 785

Query: 254 GMLTLALDKGFSPNEI 269
            +    L  G  P+++
Sbjct: 786 MLYDHMLVNGIMPDDL 801



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 4/154 (2%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I+F  LI    K  R D    I+  MLE    PN  T   LI    K    ++  ++ ++
Sbjct: 661 ITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEK 720

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           + G R SP ++  + LI  + ++  +EE  +  +  + ++++ D IAY +++    K+  
Sbjct: 721 MLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGR 780

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           L  A+++Y+ ML  G   +  +      A  EYG
Sbjct: 781 LAEAMMLYDHMLVNGIMPDDLLQK----ALAEYG 810


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 167/371 (45%), Gaps = 4/371 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRT 63
           E AF +   +++RG S  +++ ++++  +  +     + R  Q+  E++   P+      
Sbjct: 122 ERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGN---LSRAMQYFRESVECAPDSVLFNI 178

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LCK  QL     M++ +  +   P V+   SLI  + +  R+EE   LL+ M+++ 
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + Y+ ++Y   K      A  + E M++ G   +   + + I  +C+  KI++A 
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M+     P   T+N+LI G   A R  E+     +M  R +LP    +N +I   
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIF 358

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C     +QA  +  L +++G  P+ I+Y  L     K     E   L   M      P L
Sbjct: 359 CRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNL 418

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             + SL+  LC   +L+EA     +M+     P    YE LV    + G    A  +   
Sbjct: 419 FTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVM 478

Query: 364 MVSEGLKPSTS 374
           MVSEG++P  S
Sbjct: 479 MVSEGIQPLVS 489



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 155/337 (45%), Gaps = 5/337 (1%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQL-QTYVDMLDRIHGKRCSPMVIVNTSLIL 101
           W    H  E+I   N  T   L+  L K  +  Q Y    D + G+ C    I   +LI 
Sbjct: 56  WVTRSHRGESIH--NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIG 113

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
              +   +E    LL  M  +    D + +S IV A     NL  A+  + E ++   + 
Sbjct: 114 GFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAP 171

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           +S ++   +   C+  ++ EA  +++EM   G+ P   T+N LI+G  K+ R+EE+    
Sbjct: 172 DSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLL 231

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           E M+ RK+ P+   +N +I   C+ G    A+ ++   +  G  P+ +T++ LI G+ ++
Sbjct: 232 ETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQK 291

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
            +I +  ++ + M+    +P L  Y  LIS LC  G+  EA +    M    ++P +  Y
Sbjct: 292 SKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITY 351

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            SL+GI        +A  +   MV  G+ P     C+
Sbjct: 352 NSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCT 388



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 141/313 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG    ++++N+LI  + KS R +   ++ + M++    PN  T  TLI   CK G 
Sbjct: 199 MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGC 258

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                 +++R+      P V+   SLI    Q+ +I++   +L  M +     + + Y++
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNV 318

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++           A  +  EM  RG   +   Y + IG +C   +IE+A  +   M   G
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++  L     K++R +E+ +  + M     +P+   FN ++  LC      +A 
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L +    G  P   TY  L+ G  K G + +  ++   M  + I P + +  +++ +L
Sbjct: 439 HLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTL 498

Query: 314 CQCGKLEEADKYF 326
            + GK + A  YF
Sbjct: 499 AREGKQDLALHYF 511



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 136/295 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R    +L+++NTLI+   K+    L  ++ + M+++  +P+  T  +LIS  C+  ++ 
Sbjct: 236 KRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKID 295

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              ++L  +    C+P ++    LI  +    R  E   LL  M  + ++ D I Y+ ++
Sbjct: 296 KACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLI 355

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +E A  +   M++RG   +   Y T   A  +  + +EA  L+  M +AG  
Sbjct: 356 GIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAI 415

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN L+EG   ++R++E+      M      P+ S +  ++  LC+ G    A  +
Sbjct: 416 PNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEV 475

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           L + + +G  P   +   ++   A+EG+    L  + ++         P+Y  L+
Sbjct: 476 LVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLL 530



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 44/235 (18%), Positives = 94/235 (40%), Gaps = 38/235 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ RG    +I++N+LI +  ++ + +  ++I   M+E    P+  +  TL  AL K   
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLK--- 395

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                                            ER +E   LL  M     I +   ++ 
Sbjct: 396 --------------------------------SERFDEAFALLDNMFDAGAIPNLFTFNS 423

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++      R L+ A  +   M + G    +  Y   +   C+ G++++A  ++  M + G
Sbjct: 424 LMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEG 483

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMM---SRKLLPSCSAFNEMIRRLCE 245
           ++P   +   ++   A+  + + +L Y +Q++   S+   PS     E ++ L E
Sbjct: 484 IQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFVKVLRE 538


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 158/343 (46%), Gaps = 2/343 (0%)

Query: 13  YLE--QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           YLE    G+  ++  FN L+H   K         ++  +      P+  +  TLIS  C+
Sbjct: 214 YLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCR 273

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
              ++    +   +  +R SP V   ++LI  + +E R+EE   L   M    ++ + + 
Sbjct: 274 SKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVT 333

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ ++  + K   ++ AL  +E M  RG   +   Y   I   C  G ++EA  L+ EM 
Sbjct: 334 FTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMI 393

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G KP   TF  L++GC K   ++ +L   ++M+   +     AF  +I  LC  G  +
Sbjct: 394 GNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVR 453

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  ML   L  G  P++ TY+ +I  + K+G+++   KL  EM+     P +  Y +L+
Sbjct: 454 DAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALM 513

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           +  C+ G+++ A      M +  +VP    +  L+  H + G+
Sbjct: 514 NGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS 556



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 1/371 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTK-SDRNDLVWRIYQHMLENIRYPNEATI 61
             E A    R +++  FS+ +   + L+  V K + +    W  Y  +L+    PN    
Sbjct: 170 FIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLF 229

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+   CK G +     + D I  +   P V+   +LI    + + +EEG VL   M  
Sbjct: 230 NILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMES 289

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  D   YS ++    K   +E A  +++EM + G   N   +TT I   C++GKI+ 
Sbjct: 290 ERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDL 349

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A    + M++ G++P   T+N LI G  +   ++E+     +M+     P    F  ++ 
Sbjct: 350 ALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMD 409

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G+   A  +    +++G   +++ ++ LI G  ++G +++  ++  +M      P
Sbjct: 410 GCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKP 469

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
             P YT +I   C+ G ++   K  K M+    VPGV  Y +L+    ++G    A  L 
Sbjct: 470 DDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLL 529

Query: 362 EEMVSEGLKPS 372
             M++  + P+
Sbjct: 530 HAMLNMEVVPN 540



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 132/278 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E  F +   +E    S  + +++ LI+ + K  R +    ++  M E    PN  T  TL
Sbjct: 278 EEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTL 337

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK G++   +   + +  +   P +I   +LI  + ++  ++E   LL  M+    
Sbjct: 338 IDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGF 397

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I ++ ++    K  +++SAL + + M++ G   +   +T  I   C  G++ +A  
Sbjct: 398 KPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAER 457

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++++M +AG KP D T+ ++I+   K   ++      ++M     +P    +N ++   C
Sbjct: 458 MLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFC 517

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           + G  K A  +L   L+    PN+IT++ L+ G+ K G
Sbjct: 518 KQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 155/328 (47%), Gaps = 7/328 (2%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M++    P+  T   L+  LC+  QL+    +L R+    C P   +  +LI    + + 
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
             +    L  M++ + +   + Y+ IV    K    + A+ + +EM  +G S N + Y  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +   CE  K++EA  +++EM   G  P   T+N  I+G  K  R++E+  +  +M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           + P   ++  +I  LC+ G+   A+ ML    ++G +P+ +TYS LI G+ K GE++  +
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG-- 346
            L   M      P + AY SL+ +L + G + +A+     M+     P V  Y + +   
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              E+  KAKA+   + MV  G  P+ S
Sbjct: 298 CKAERVKKAKAVF--DRMVERGCTPNAS 323



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 170/358 (47%), Gaps = 5/358 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG+   ++++N+ I  + K DR D   +    M      P+  +  T+I+ LCK G L +
Sbjct: 144 RGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDS 200

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              MLD++  + C+P V+  +SLI    +   +E  M LL  ML+     + +AY+ ++ 
Sbjct: 201 ASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLG 260

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  ++ ++  A  +  EM +RGF+ +   Y   I   C+  ++++A  +   M   G  P
Sbjct: 261 ALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTP 320

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++++L+E   K K ++++++  EQ   +  +     +  ++  LC+ G   +A  + 
Sbjct: 321 NASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALF 380

Query: 257 TLALDKGF-SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +  LD+    P+   Y+ ++  + K  +I + L+++ +M  ++    +  +  L+  LC 
Sbjct: 381 SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVV-TWNILVHGLCV 439

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +L +A+     M     +P    Y +LV    + G  A AL L EE V  G  P  
Sbjct: 440 DDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 497



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 3/340 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            +F  L+  + +S++ +   ++   M E    P++A    LIS   K          L  
Sbjct: 11  FTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAE 70

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C P V+  T+++  + +  R ++ + LL  M  K    +   Y++IV    + R 
Sbjct: 71  MVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERK 130

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A  + EEM  RG+  +   Y +FI   C+  +++EA   +  M    + P   ++  
Sbjct: 131 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTT 187

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I G  K+  ++ +    +QM +R   P    ++ +I   C+ G  ++A G+L   L  G
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 247

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN + Y+ L+G   + G I +   +  EME +  +P + +Y + I  LC+  ++++A 
Sbjct: 248 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             F  M      P    Y  LV    +K     A+ L E+
Sbjct: 308 AVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 162/345 (46%), Gaps = 4/345 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++  ++  + K+ R     ++   M +    PN  T   ++  LC+  +L     ML
Sbjct: 79  TVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKML 138

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  +   P V+   S I  + + +R++E    L RM    +  D ++Y+ ++    K 
Sbjct: 139 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKS 195

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +L+SA  + ++M  RG + +   Y++ I  +C+ G++E A  L+  M   G +P    +
Sbjct: 196 GDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAY 255

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N L+    +   I ++     +M  R   P   ++N  I  LC+    K+A  +    ++
Sbjct: 256 NSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE 315

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G +PN  +YS L+    K+ E+ + + L  +   K     +  YT L+  LC+ G+ +E
Sbjct: 316 RGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDE 375

Query: 322 ADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           A   F K++      P V  Y  ++  H ++    KAL + ++M+
Sbjct: 376 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/398 (21%), Positives = 174/398 (43%), Gaps = 44/398 (11%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++L +   +  ++S+ T+I+ + KS   D   R+   M      P+  T  +LI   CKG
Sbjct: 171 KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKG 230

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+++  + +LD +    C P ++   SL+  + +   I +   +L  M R+    D ++Y
Sbjct: 231 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 290

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANS---------------------------- 163
           +  +    K   ++ A  V++ M++RG + N+                            
Sbjct: 291 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQARE 350

Query: 164 -------FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF-NLLIEGCAKAKRIE 215
                   +YT  +   C+ G+ +EA  L  ++ +  +   D  F N++++   K ++I+
Sbjct: 351 KYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 410

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           ++L   +QM+ R    +   +N ++  LC       A  ML   +D+GF P+ +TY  L+
Sbjct: 411 KALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 469

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
               K G+    L+L+ E       P +  Y++LI+ L      EEA   F  +      
Sbjct: 470 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLD----- 524

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             V ++ +++  + E G+    L L  E++   ++P+ 
Sbjct: 525 --VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNA 560



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/353 (21%), Positives = 160/353 (45%), Gaps = 10/353 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +E+RGF+  ++S+N  I  + K++R      ++  M+E    PN ++   L+ 
Sbjct: 271 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVE 330

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  +L   + ++++   K     +++ T L+  + +  R +E   L  ++L + +  
Sbjct: 331 ELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICE 390

Query: 127 -DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   Y++++ +  K R ++ AL ++++ML+R    N   +   +   C   ++ +A  +
Sbjct: 391 PDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN-CCNVVTWNILVHGLCVDDRLSDAETM 449

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M + G  P   T+  L++   K  +   +L   E+ +    +P    ++ +I  L  
Sbjct: 450 LLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 509

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
              A++A  + T  LD         ++ +I GYA+ G     LKL+ E+    + P    
Sbjct: 510 ENMAEEAYLLFT-KLDVAL------WNAMILGYAENGSGDLGLKLFVELIESDVEPNART 562

Query: 306 YTSLISS-LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           +   IS  L +   L +A   F         P + +  +L+ +  + G+  +A
Sbjct: 563 FGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEA 615


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 151/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 111 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 164

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 165 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 194

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 195 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAME 254

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             ++M+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ TY+ LI G  
Sbjct: 255 IYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 314

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 315 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTG 374

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM  +G  PS
Sbjct: 375 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPS 407



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 148/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 106 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 165

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 166 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 225

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +I + + ++ ++  + K   ++ A+ +Y+ ML +    +   Y T I   C+ G ++
Sbjct: 226 VKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 285

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 286 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 345

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L     P+  TY+ +I  + K+G++ +  KL  EM+    +
Sbjct: 346 SGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHA 405

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 406 PSVVTYNVLMNG 417



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 110/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 104 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 163

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN +   
Sbjct: 164 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 223

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G  K G +   +++Y  M  +S+ P L  Y +LI  LC+ G 
Sbjct: 224 MLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 283

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 284 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 335



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 10  TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSGLITAYL 69

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G   +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 70  ESGFXRDAIECYRLTREHKLWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 128

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 129 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 188

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    L+P    + +L+    + G 
Sbjct: 189 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGR 248

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + + M+S+ L P 
Sbjct: 249 VDLAMEIYKRMLSQSLLPD 267


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 165/350 (47%), Gaps = 4/350 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRTLISALCKGGQLQTYVD 79
            +++ NT++  + KS R        +  + ++    PN  T   LI A C+ G +    +
Sbjct: 208 DVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYE 267

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL--KRMLRKNMIHDTIAYSLIVYA 137
           +++++  +     ++   +++  + +  R    +     KR +      + + YS +V A
Sbjct: 268 LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGA 327

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            +   N+  A+ ++ E +  G S ++ +Y T I    + G++E+A  +   M+ AG K  
Sbjct: 328 LLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLD 387

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            + +N+LI G  + KR+ E+    ++M    + P    +N ++   C+ G+    + +L 
Sbjct: 388 TKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLG 447

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +D G  P+ IT+  L+ GY K G+I E L++   M+   I P    Y +LI  LC+ G
Sbjct: 448 KMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRG 507

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            ++ A + F  MK  S+   V  + +L+    +K    KA  L ++M  E
Sbjct: 508 DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREE 557



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 157/361 (43%), Gaps = 13/361 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM--LENIRYPNEATIRTLISALCKGGQLQTYVD 79
            + +FN+++  + +      + RIY  M    ++R P+  T   L++ LCK G++   + 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVR-PDVVTYGILVNGLCKAGRVGDALR 193

Query: 80  MLDRIHGKRCS--PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH----DTIAYSL 133
           +LD +  +     P V+   +++  + +  R++E +  +++  R + +H    +T+ Y+ 
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQ--RMSSVHGCPPNTVTYNC 251

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  ++ N+  A  + E+M   G   N     T +G  C  G+   A    +E     
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311

Query: 194 L--KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
              K    T++ L+        +  ++    + MS    P    +  MI  L + G  + 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  M +   + GF  +   Y+ LI G+ ++  + E  +L  EM+   I P +  Y +L+S
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+ G     D+    M      P V  + +LV  + + G   +AL +   M   G+ P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 372 S 372
           +
Sbjct: 492 N 492



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/326 (19%), Positives = 140/326 (42%), Gaps = 6/326 (1%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP----NEATI 61
           +A+++   +E  G   ++++ NT++  + ++ R       ++   +   +P    N  T 
Sbjct: 264 MAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTY 321

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL+ AL     +   +++      +  SP  I+  ++I  + Q  R+E+   +   M  
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                DT AY++++    + + L  A  + +EM + G   +   Y T +   C+ G    
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
            + L+ +M + G +P   TF  L+ G  K  +I+E+L     M    + P+   +N +I 
Sbjct: 442 VDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID 501

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G+   A  +     +K    N  T++ L+ G   +   ++  +L  +M  +   P
Sbjct: 502 FLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFP 561

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFK 327
                  L+  L   G+ +   ++ +
Sbjct: 562 DYVTVDVLMEWLPVIGETDRLKRFMQ 587



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/275 (17%), Positives = 122/275 (44%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++++TL+  +  ++   +   ++   +     P+     T+IS L + G+L+    M   
Sbjct: 319 VTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASS 378

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +              LI    +++R+ E   LL+ M    +  D   Y+ ++    K  +
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             +   +  +M+  G   +   + T +  YC+ GKI+EA  +++ M+ +G+ P +  +N 
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+   K   ++ ++   ++M  + +  + + FN +++ L +    ++A  ++    ++ 
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
             P+ +T   L+      GE   + +   + E+ +
Sbjct: 559 CFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTA 593



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 86/229 (37%), Gaps = 35/229 (15%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +++ GF L   ++N LI    +  R    + + Q M E    P+  T  T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+S  CK G      ++L ++    C P VI                             
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVIT---------------------------- 460

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                  +  +V+   K+  ++ AL +   M + G   N+ +Y T I   C+ G ++ A 
Sbjct: 461 -------FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            L  EM+   +     TFN L++G       E++    +QM   +  P 
Sbjct: 514 ELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 169/365 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++ ++   I  + ++ R D  W I++ M +    P+  T   LI ALC  G+L   
Sbjct: 265 GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKA 324

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++  ++     SP  +   +L+ +  +   +E        M       D + Y++++ A
Sbjct: 325 KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEA 384

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K  +++ A  + + M  +G   N   Y T I    +  +++EA  L++ ME+ G+KP 
Sbjct: 385 LCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPT 444

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++ L I+   K+    +++   E M  R ++PS +A N  +  L E G   +A  +  
Sbjct: 445 AFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFN 504

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                G SP+ +TY+ L+  Y+K G+I +  +L  EM  K   P +    SLI++L + G
Sbjct: 505 DLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAG 564

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           +++ A K F  +K+  L P V  Y  L+    ++G   KAL L   M   G  P+T    
Sbjct: 565 RVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFN 624

Query: 378 SASTC 382
           S   C
Sbjct: 625 SLLDC 629



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 164/361 (45%), Gaps = 1/361 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + + GF L+  S+N LIH++     N+ + ++Y+ M+     P+  T   L+ AL + 
Sbjct: 190 RKMTEVGFILNAYSYNGLIHLLLPGFCNEAL-KVYKRMISEGMKPSMKTYSALMVALGRR 248

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G  +  +++L+ +      P +   T  I  + +  RI++   + K M  +    D I Y
Sbjct: 249 GDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITY 308

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++ A      L+ A  +Y +M     S +   Y T +  + + G +E       EME 
Sbjct: 309 TVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEV 368

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G  P   T+ +LIE   K+  ++ +    + M ++ + P+   +N MI  L +     +
Sbjct: 369 DGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDE 428

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +L      G  P   +Y   I  Y K G+  + +  +  M+ + I P++ A  + + 
Sbjct: 429 ALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLY 488

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           +L + G++ EA+  F  +    L P    Y  L+  + + G   KA  L  EM+S+G +P
Sbjct: 489 TLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEP 548

Query: 372 S 372
            
Sbjct: 549 D 549



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 166/367 (45%), Gaps = 37/367 (10%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
             FD  ++ +  G   +L S+N L+  +  S+  +    +++ M     +PN  T   L+ 
Sbjct: 782  VFD--KFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLD 839

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            A  K  ++    D+   +  + C P  I +  +I  +++   + + + L   ++  +   
Sbjct: 840  AHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSP 899

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
                Y  ++   +K    E A+ ++EEML  G   NS +Y   I  + + G+I+ A  L 
Sbjct: 900  TPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELF 959

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            ++M   G++P  +++ +L+E      RI+E++ Y E++   KL                 
Sbjct: 960  KKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL---KL----------------- 999

Query: 247  GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                            G  P+ ++Y+ +I G  K   + E L L+ EM+ + ISP L  Y
Sbjct: 1000 ---------------TGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTY 1044

Query: 307  TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +LI  L   GK++ A K ++ ++   L P V  Y +L+  H   GNK +A  + ++M+ 
Sbjct: 1045 NALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMV 1104

Query: 367  EGLKPST 373
             G  P+T
Sbjct: 1105 VGCSPNT 1111



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 178/388 (45%), Gaps = 38/388 (9%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM- 80
             ++++NT+I+ + +  R D  +  + H ++    P+  T+ TLI  + + G+++  + + 
Sbjct: 654  DVLTYNTIIYGLIREGRIDYAFWFF-HQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVV 712

Query: 81   LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-----------------------VLLK 117
            ++ +H             L+  I+ E  IEE +                       VL K
Sbjct: 713  MEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCK 772

Query: 118  RM-----------LRKNM-IHDTI-AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
            R              KN+ IH T+ +Y+ ++   +     E AL ++E+M   G   N+F
Sbjct: 773  RKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNF 832

Query: 165  VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
             Y   + A+ +  +I +   L  EM + G +P   T N++I    K+  + ++L    ++
Sbjct: 833  TYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYEL 892

Query: 225  MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
            MS    P+   +  +I  L + G ++QA  +    LD G  PN + Y+ LI G+ K GEI
Sbjct: 893  MSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEI 952

Query: 285  QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
                +L+ +M  + I P L +YT L+  LC  G+++EA +YF+ +K   L P    Y  +
Sbjct: 953  DFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFI 1012

Query: 345  VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +    +     +AL L  EM + G+ P 
Sbjct: 1013 INGLGKSRRLDEALSLFSEMKNRGISPD 1040



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 168/373 (45%), Gaps = 13/373 (3%)

Query: 13  YLEQRGFSLSL--ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           Y++ R  S S   +++ TL+    K    + V R +  M  +   P+  T   LI ALCK
Sbjct: 328 YVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            G +    DMLD +  K   P +    ++I  +++  R++E + LL+ M    +     +
Sbjct: 388 SGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFS 447

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGF-----SANSFVYTTFIGAYCEYGKIEEANCL 185
           Y L +    K  +   A+  +E M KRG      + N+ +YT       E G+I EA  +
Sbjct: 448 YVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT-----LAETGRISEAEDI 502

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             ++   GL P   T+N+L++  +KA +I+++     +M+S+   P     N +I  L +
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYK 562

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G    A  M     +   +P  +TY+ L+ G  KEG+I + L+L+  M      P    
Sbjct: 563 AGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTIT 622

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           + SL+  L +   ++ A K F  M   +  P V  Y +++   + +G    A     +M 
Sbjct: 623 FNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM- 681

Query: 366 SEGLKPSTSYLCS 378
            + L P    LC+
Sbjct: 682 KKFLSPDYVTLCT 694



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 143/313 (45%)

Query: 5    EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            E A ++   ++  G   +  ++N L+    KS R + ++ +Y  M      PN  T   +
Sbjct: 813  EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872

Query: 65   ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            ISAL K   L   +D+   +     SP       LI  +++  R E+ M + + ML    
Sbjct: 873  ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932

Query: 125  IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +++ Y++++    K   ++ A  ++++M+K G   +   YT  +   C  G+I+EA  
Sbjct: 933  GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
              +E++  GL P   ++N +I G  K++R++E+LS   +M +R + P    +N +I  L 
Sbjct: 993  YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLG 1052

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              G    A  M       G  P+  TY+ LI G++  G   +   ++ +M     SP   
Sbjct: 1053 IAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTE 1112

Query: 305  AYTSLISSLCQCG 317
             +  L +   + G
Sbjct: 1113 TFAQLPNKYPRAG 1125



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/440 (20%), Positives = 179/440 (40%), Gaps = 75/440 (17%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   L + G S   +++N L+   +K+ + D   ++   M+     P+   I +LI+
Sbjct: 499 AEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLIN 558

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL----------- 115
            L K G++     M  R+   + +P V+    L+  + +E +I + + L           
Sbjct: 559 TLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPP 618

Query: 116 ---------------------LKRMLRKNMIH---DTIAYSLIVYAKVKMRNLESALVVY 151
                                LK   R  M++   D + Y+ I+Y  ++   ++ A   +
Sbjct: 619 NTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFF 678

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAK 210
            +M K+  S +     T I     +G++E+A   +M+ +  A L+   + +  L+E    
Sbjct: 679 HQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILT 737

Query: 211 AKRIEESLSYCEQMM--------------------SRKLLPSCSAFNEMIRRLCECGNAK 250
              IEE++S+ E ++                     +K L + + F++  + L      +
Sbjct: 738 EAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLE 797

Query: 251 QANGMLTLALDKGFS----------------PNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             N ++   L   F+                PN  TY+ L+  + K   I ++  LY EM
Sbjct: 798 SYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEM 857

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
             +   P    +  +IS+L +   L +A D Y+++M S    P    Y  L+   L+ G 
Sbjct: 858 RSRGCEPNAITHNIIISALVKSNNLNKALDLYYELM-SGDFSPTPCTYGPLIDGLLKAGR 916

Query: 354 KAKALHLCEEMVSEGLKPST 373
             +A+ + EEM+  G  P++
Sbjct: 917 SEQAMKIFEEMLDYGCGPNS 936



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 118/254 (46%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A D+   L    FS +  ++  LI  + K+ R++   +I++ ML+    PN      LI+
Sbjct: 885  ALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILIN 944

Query: 67   ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
               K G++    ++  ++  +   P +   T L+  +    RI+E +   + +    +  
Sbjct: 945  GFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDP 1004

Query: 127  DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            DT++Y+ I+    K R L+ AL ++ EM  RG S + + Y   I      GK++ A  + 
Sbjct: 1005 DTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMY 1064

Query: 187  QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +E++  GL+P   T+N LI G + +   +++ S  ++MM     P+   F ++  +    
Sbjct: 1065 EELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRA 1124

Query: 247  GNAKQANGMLTLAL 260
            G      G + + L
Sbjct: 1125 GLVHNPFGAVFIGL 1138


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 169/354 (47%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S  +++FN LI+      R  +       M+ +   P+ AT  T++ ALC+ G +     
Sbjct: 279 SPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARK 338

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           + D I     +P   +  +L+    +   + +  +L + M    +  D + ++++V+   
Sbjct: 339 LFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHY 398

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   +E +  + ++++  G   +S +Y   + + C  G+++EA  L+QE+   GL     
Sbjct: 399 KYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVV 458

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            FN LI   ++A   +++      M+     PS S  N ++  LC  G  ++A  +L   
Sbjct: 459 AFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRM 518

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L+KGF  N++ Y+ L+ GY K   ++    L+ EM+ + I P   A+T+LI  L + G +
Sbjct: 519 LEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNV 578

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EEA + F  M +   VP    Y SL+    + G   +AL L +EM  +GL   T
Sbjct: 579 EEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDT 632



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 35/339 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + + L ++G +LS+++FN+LI   +++   D  +  Y+ M+     P+ +T  +L+ 
Sbjct: 441 AMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLM 500

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G LQ                                   E  +LL RML K    
Sbjct: 501 GLCRKGWLQ-----------------------------------EARILLYRMLEKGFPI 525

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + +AY++++    KM NLE A  +++EM +RG   ++  +T  I    + G +EEA  + 
Sbjct: 526 NKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVF 585

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G  P +  +N LI G     R+ E+L   ++M  + LL     FN +I   C  
Sbjct: 586 LEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRR 645

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  K A          G  P+  T++ LIGGY K  ++    ++  +M    + P +  Y
Sbjct: 646 GQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTY 705

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            + +   C+  K+ +A      + S  +VP    Y +++
Sbjct: 706 NTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTML 744



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 172/371 (46%), Gaps = 2/371 (0%)

Query: 5   EVAFDVCRYLEQR--GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           EVA     Y E R  G S   ++FN L+    K  R +   R+ + ++ +  + + +   
Sbjct: 367 EVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYD 426

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            ++S+LC  G+L   + +L  +  K  +  V+   SLI    +    ++     + M+R 
Sbjct: 427 VMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRC 486

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                +   + ++    +   L+ A ++   ML++GF  N   YT  +  Y +   +E A
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGA 546

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM+  G+ P    F  LI+G +KA  +EE+     +M +   +P+  A+N +IR 
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRG 606

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+CG   +A  +      KG   +  T++ +I G+ + G+++  ++ + +M+   + P 
Sbjct: 607 LCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPD 666

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  +  LI   C+   +  A +    M S  L P +  Y + +  +       +A+ + +
Sbjct: 667 IFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILD 726

Query: 363 EMVSEGLKPST 373
           +++S G+ P T
Sbjct: 727 QLISAGIVPDT 737



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 103/228 (45%)

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           S   ++++M+ +G   ++  +   I  +C   ++     L+  M      P   TFN+LI
Sbjct: 230 SVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILI 289

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
             C    R   ++ +   M+   + PS + F  ++  LC  GN  +A  +     D G +
Sbjct: 290 NACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIA 349

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           PN   Y+ L+ GY K  E+ +   LY EM    +SP    +  L+    + G++E++D+ 
Sbjct: 350 PNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRL 409

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            K +    L     +Y+ +V      G   +A+ L +E++ +GL  S 
Sbjct: 410 LKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSV 457



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 121/276 (43%), Gaps = 38/276 (13%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG     ++F  LI  ++K+   +  + ++  M      PN     +LI  LC  G 
Sbjct: 553 MKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCG- 611

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                                             R+ E + L K M +K ++ DT  +++
Sbjct: 612 ----------------------------------RVTEALKLEKEMRQKGLLSDTFTFNI 637

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    +   ++ A+  + +M + G   + F +   IG YC+   +  A  ++ +M + G
Sbjct: 638 IIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCG 697

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N  + G  + +++ +++   +Q++S  ++P    +N M+  +C   +     
Sbjct: 698 LDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS--DILDRA 755

Query: 254 GMLTLALDK-GFSPNEITYSHLIGGYAKEGEIQEVL 288
            +LT  L K GF PN IT + L+  + K+G  ++ L
Sbjct: 756 MILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKAL 791


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 185/386 (47%), Gaps = 9/386 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R +E A D+   + ++GF  S  ++N +I    K  R      +   ML N    +  + 
Sbjct: 231 RRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISY 290

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            ++I+A  +G + +  +D+L+++  +  SP VI   S I    + +R +E + LL+ M  
Sbjct: 291 SSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTT 350

Query: 122 KNMIHDTIAYSLIVYA-KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             ++   I+Y+    A  V  R +E AL + +EM  +G + N+  Y + + A  + G+ E
Sbjct: 351 VGLVPTVISYNSATAACAVNGRWVE-ALELLKEMPAQGIAPNTISYNSALDACAKGGQWE 409

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L++ M   G  P   +FN  I+ C + ++ E ++    +M +  L P+   +N  I
Sbjct: 410 KAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAI 469

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                    ++A G+      +G SPN +TY+ +I   AK  + +  ++L   M  + ++
Sbjct: 470 EACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVA 529

Query: 301 PTLPAYTSLISSLCQCGKLEE---ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           P + +Y S I +   CGK E+   A +  K M +    P +  Y S V    + G   +A
Sbjct: 530 PDVISYNSAIEA---CGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREA 586

Query: 358 LHLCEEMVSEGLKPST-SYLCSASTC 382
           L L ++M + GL P+T SY  +   C
Sbjct: 587 LGLLKDMATVGLTPNTVSYGAAIHAC 612



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 170/377 (45%), Gaps = 10/377 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-- 59
           R +  A  + R +   G +  ++++N+ I   +K  R    W+    +L  +  P E   
Sbjct: 124 RQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGR----WKEAMDLLTQMVAPTEGIT 179

Query: 60  ----TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
               T  + I+A   GG+ +  +D+L+++  +   P +I   S I    +  R EE M L
Sbjct: 180 PDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDL 239

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ ++ +     T  Y+ ++ A  K      A+ +  +ML     A+   Y++ I A   
Sbjct: 240 LEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGR 299

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             + +EA  L+++M   G+ P   ++N  I+ CAK  R +E+L    +M +  L+P+  +
Sbjct: 300 GRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVIS 359

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N         G   +A  +L     +G +PN I+Y+  +   AK G+ ++ +KL   M 
Sbjct: 360 YNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMS 419

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
                P + ++ S I +  +  + E A +  + M +  L P V  Y S +          
Sbjct: 420 TVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQ 479

Query: 356 KALHLCEEMVSEGLKPS 372
           +A+ L  EM + GL P+
Sbjct: 480 EAMGLFREMPTRGLSPN 496



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 175/384 (45%), Gaps = 17/384 (4%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R ++ A D+   +  +G S ++IS+N+ I    K DR      + + M      P   + 
Sbjct: 301 RRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISY 360

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +  +A    G+    +++L  +  +  +P  I   S +    +  + E+ + LL+ M  
Sbjct: 361 NSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMST 420

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                D I+++  + A  + +  E+A+ +  EM   G + N   Y + I A     + +E
Sbjct: 421 VGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQE 480

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L +EM   GL P   T+N +I+ CAK ++ E ++     M +R + P   ++N  I 
Sbjct: 481 AMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIE 540

Query: 242 RLCECGNAKQANGMLTLALDKGFS-----PNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
               CG  +Q    L L L KG       P+ I+Y+  +   AK G  +E L L  +M  
Sbjct: 541 ---ACGKGEQWE--LALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMAT 595

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEAD---KYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
             ++P   +Y + I +   CGK E+ D   +  K M++H   P +  Y + +    ++G 
Sbjct: 596 VGLTPNTVSYGAAIHA---CGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGR 652

Query: 354 KAKALHLCEEMVSEGLKP-STSYL 376
             +A+ L  ++  +GL P + +YL
Sbjct: 653 WKEAVDLLTDLRRQGLTPDAQTYL 676



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 168/373 (45%), Gaps = 2/373 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R +  A       +  G SL   S+N  I   +   +     R+ + M      P+  T 
Sbjct: 89  RDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTY 148

Query: 62  RTLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
            + I+A  KGG+ +  +D+L ++    +  +P V+   S I       R +E M LL++M
Sbjct: 149 NSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQM 208

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           + + +  + I Y+  + A  K R  E A+ + EE++++GF  ++  Y   I A  + G+ 
Sbjct: 209 VAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRW 268

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            EA  L+ +M    +     +++ +I  C + +R +E++   EQM ++ + P+  ++N  
Sbjct: 269 LEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSA 328

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I    +    K+A  +L      G  P  I+Y+      A  G   E L+L  EM  + I
Sbjct: 329 IDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGI 388

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P   +Y S + +  + G+ E+A K  + M +    P +  + S +           A+ 
Sbjct: 389 APNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVE 448

Query: 360 LCEEMVSEGLKPS 372
           L  EM + GL P+
Sbjct: 449 LLREMPTAGLTPN 461



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 173/402 (43%), Gaps = 38/402 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +  ++++N+ I   +   R      + + M+     PN  T  + I A  KG + +  
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEA 236

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L+ +  +   P       +I    +  R  E M LL +ML  ++  D I+YS ++ A
Sbjct: 237 MDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAA 296

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             + R  + A+ + E+M  +G S N   Y + I A  +  + +EA  L++EM   GL P 
Sbjct: 297 CGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPT 356

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA----N 253
             ++N     CA   R  E+L   ++M ++ + P+  ++N  +    + G  ++A     
Sbjct: 357 VISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLR 416

Query: 254 GMLTLALDK-------------------------------GFSPNEITYSHLIGGYAKEG 282
           GM T+  D                                G +PN ITY+  I    +  
Sbjct: 417 GMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSA 476

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
             QE + L+ EM  + +SP +  Y S+I +  +  + E A +    M +  + P V  Y 
Sbjct: 477 RWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYN 536

Query: 343 SLVGIHLEKGNKAK-ALHLCEEMVSEGLKPS-TSYLCSASTC 382
           S +     KG + + AL L + M + G KP   SY  + + C
Sbjct: 537 SAI-EACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTAC 577



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 149/342 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ A D+ R +   G   ++IS+N+       + R      + + M      PN  +  +
Sbjct: 338 WKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNS 397

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            + A  KGGQ +  V +L  +      P +I   S I    + ++ E  + LL+ M    
Sbjct: 398 ALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAG 457

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I Y+  + A  +    + A+ ++ EM  RG S N   Y + I A  +  + E A 
Sbjct: 458 LTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAV 517

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  M   G+ P   ++N  IE C K ++ E +L   + M +R   P   ++N  +   
Sbjct: 518 QLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTAC 577

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G  ++A G+L      G +PN ++Y   I    K  +    +++  EM+    +P L
Sbjct: 578 AKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNL 637

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             Y++ I +  + G+ +EA      ++   L P    Y +++
Sbjct: 638 ITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVI 679



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 6/313 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + +  +G + + IS+N+ +    K  + +   ++ + M      P+  +  + I 
Sbjct: 376 ALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAID 435

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  +G Q +T V++L  +     +P VI   S I    +  R +E M L + M  + +  
Sbjct: 436 ACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSP 495

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++ A  K    E A+ +   M  RG + +   Y + I A  +  + E A  L+
Sbjct: 496 NVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLL 555

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G KP   ++N  +  CAK+ R  E+L   + M +  L P+  ++   I     C
Sbjct: 556 KGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIH---AC 612

Query: 247 GNAKQ---ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           G  +Q   A  +L      G +PN ITYS  I   AK+G  +E + L  ++  + ++P  
Sbjct: 613 GKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDA 672

Query: 304 PAYTSLISSLCQC 316
             Y ++IS+  +C
Sbjct: 673 QTYLTVISAFQRC 685



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 5/249 (2%)

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
           + K R+  +AL   +E    G S ++  Y   I A     +   A  L++EM   G+ P 
Sbjct: 85  EAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPD 144

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMM--SRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
             T+N  I  C+K  R +E++    QM+  +  + P    +N  I      G  K+A  +
Sbjct: 145 VVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDL 204

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   + +G  PN ITY+  IG  AK    +E + L  E+  +   P+   Y  +I +  +
Sbjct: 205 LEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAK 264

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK-ALHLCEEMVSEGLKPST- 373
            G+  EA      M ++ +   V  Y S++     +G + K A+ L E+M ++G+ P+  
Sbjct: 265 GGRWLEAMDLLGQMLTNDIPADVISYSSVIA-ACGRGRRWKEAMDLLEQMRTQGVSPNVI 323

Query: 374 SYLCSASTC 382
           SY  +   C
Sbjct: 324 SYNSAIDAC 332



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 111/245 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A ++ R +   G + ++I++N+ I    +S R      +++ M      PN  T  +
Sbjct: 443 WETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNS 502

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I A  KG Q +  V +L  +  +  +P VI   S I    + E+ E  + LLK M  + 
Sbjct: 503 MIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRG 562

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I+Y+  V A  K      AL + ++M   G + N+  Y   I A  +  + + A 
Sbjct: 563 PKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAV 622

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +++EM+  G  P   T++  I+ CAK  R +E++     +  + L P    +  +I   
Sbjct: 623 RILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682

Query: 244 CECGN 248
             C +
Sbjct: 683 QRCSD 687


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 167/368 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +EQ     +++ F+TLI  + K  +    + I+  M+     PN  T  +LI 
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  + +    +++ +   +  P V    +++  + +E  + E   ++  M+ + +  
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++        ++ A+ V++ M+ +   AN   Y T I  YC+   +++A  L 
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 373

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    L P   T+N LI G     R+++++S   +M++R  +P    +  +   LC+ 
Sbjct: 374 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +  +A  +L       + P+   Y+ ++ G  + GE+++   L+  +  K + P +  Y
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I  LC+ G L EA K F  M  +   P    Y  +    L      + + L EEM++
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553

Query: 367 EGLKPSTS 374
            G     S
Sbjct: 554 RGFSVDVS 561



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 170/368 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + AF     + + G      +F TLI  +    +      ++  M+     PN  T  TL
Sbjct: 122 DFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTL 181

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G     + +L  +    C P V+V ++LI  + ++ ++ E   +   M+ K +
Sbjct: 182 INGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGI 241

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ +++   K+   +    +  EM+      + F   T + A C+ G + EA+ 
Sbjct: 242 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 301

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++  M + G++P   T+N L++G      ++ ++   + M+ +  + +  ++N +I   C
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 361

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  +  +A  +      +  +PN +TY+ LI G    G +Q+ + L++EM  +   P L 
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +L   LC+   L++A    K ++  +  P + IY +++      G    A  L   +
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481

Query: 365 VSEGLKPS 372
            S+GL+P+
Sbjct: 482 SSKGLQPN 489



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 165/363 (45%), Gaps = 7/363 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S + FN L+  + K+  +  +  + + M      P+  T+  +I++LC   ++      L
Sbjct: 69  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 128

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P     T+LI  +  E +I E + L  +M+ +    + + Y  ++    K+
Sbjct: 129 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKV 188

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N  +A+ +   M +     N  V++T I + C+  ++ EA  +  EM   G+ P   T+
Sbjct: 189 GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G  K    +   +   +M+  K++P     N ++  LC+ G   +A+ ++ + + 
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 308

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  PN +TY+ L+ G+    E+   +K++  M +K     + +Y +LI+  C+   +++
Sbjct: 309 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 368

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-------TS 374
           A   F+ M    L P    Y +L+      G    A+ L  EMV+ G  P        + 
Sbjct: 369 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 428

Query: 375 YLC 377
           YLC
Sbjct: 429 YLC 431



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 161/361 (44%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R ++  G    + +   +I+ +   +R D  +     +L+    P+  T  TLI  LC  
Sbjct: 94  RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVE 153

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++   + + D++ G+   P V+   +LI  + +       + LL+ M + N   + + +
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S ++ +  K R +  A  ++ EM+ +G S N   Y + I   C+  + +    LM EM +
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + + P   T N +++   K   + E+    + M+ R + P+   +N ++   C       
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    + K    N I+Y+ LI GY K   + + + L+ EM  + ++P    Y +LI 
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+L++A   F  M +   +P +  Y +L     +  +  KA+ L + +      P
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453

Query: 372 S 372
            
Sbjct: 454 D 454



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 158/346 (45%), Gaps = 35/346 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G S +++++N+LIH + K      V  +   M+++   P+  T+ T++ 
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G +    D++D +  +   P V+   +L+        ++  + +   M+ K+ + 
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I+Y+ ++    K+++++ A+ ++EEM ++  + N+  Y T I   C  G++++A  L 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 187 QEM-----------------------------------ENAGLKPYDETFNLLIEGCAKA 211
            EM                                   E +   P  + +  +++G  +A
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             +E++      + S+ L P+   +N MI  LC+ G   +A+ + +     G SPN+ TY
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + +  G+ +  E    ++L  EM  +  S  +   T L+  L   G
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 150/350 (42%), Gaps = 10/350 (2%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           + FNTL          D     +  ML     P+      L++++ K     T + +  +
Sbjct: 46  LHFNTL----------DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 95

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P V     +I  +    R++     L ++L+     D   ++ ++        
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  AL ++++M+  GF  N   Y T I   C+ G    A  L++ ME    +P    F+ 
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+   K +++ E+ +   +M+++ + P+   +N +I  LC+    K    ++   +D  
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+  T + ++    KEG + E   +   M ++ + P +  Y +L+   C   +++ A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K F  M     V  V  Y +L+  + +  +  KA++L EEM  + L P+T
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 127/281 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV   +  RG   +++++N L+      +  D+  +++  M+      N  +  TLI+
Sbjct: 299 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 358

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK   +   + + + +  +  +P  +   +LI  +    R+++ + L   M+ +  I 
Sbjct: 359 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 418

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y  +     K R+L+ A+ + + +    +  +  +YTT +   C  G++E+A  L 
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             + + GL+P   T+N++I G  K   + E+     +M      P+   +N + R     
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             A +   +L   L +GFS +  T + L+G  + +G  Q V
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 579



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 106/243 (43%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA  V   +  +    ++IS+NTLI+   K    D    +++ M      PN  T  TL
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G+LQ  + +   +  +   P ++   +L   + +   +++ M LLK +   N 
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ I+    +   LE A  ++  +  +G   N + Y   I   C+ G + EA+ 
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM   G  P D T+NL+  G  +      ++   E+M++R      S    ++  L 
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571

Query: 245 ECG 247
           + G
Sbjct: 572 DDG 574



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 90/207 (43%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + TF      +  ++EA      M +    P    FN L+   AK K     LS   QM 
Sbjct: 38  HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 97

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           S  + P       +I  LC       A   L   L  G  P+  T++ LI G   EG+I 
Sbjct: 98  SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 157

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E L L+ +M  +   P +  Y +LI+ LC+ G    A +  + M+  +  P V ++ +L+
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               +     +A ++  EM+++G+ P+
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPN 244


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 168/352 (47%), Gaps = 19/352 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+N +I+ + K    D  + ++  ML     PN  T  ++I  LCK   +     +L
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  K                    ++EE + LLK+M    +  D + YSL++    K+
Sbjct: 198 QQMFDK-------------------GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKI 238

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  +++ M++RG + +++ Y T +  Y   G + + + L+  M   G+   D  F
Sbjct: 239 GRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVF 298

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+LI   AK + ++++++   +M  +   P+   +  +I  LC+ G  + A    +  + 
Sbjct: 299 NILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G SP+ IT++ LI G    GE ++V KL +EM  + I P      +++ SLC+ G++ E
Sbjct: 359 EGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A  +F  +    + P V  Y  L+  +   G   +++ L   MVS GL+P  
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDN 470



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 16/266 (6%)

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC------------ 174
           + ++Y++++    K   ++ A  ++ EML +GF  N   Y + I   C            
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197

Query: 175 ----EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
               + G++EEA  L+++M   GL+P   T++LLI+   K  R  E+ +  + M+ R   
Sbjct: 198 QQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQN 257

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P    +  ++      G     + +L L +  G    +  ++ LI  YAK   + + +  
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           + EM  K  SP +  YT++I  LC+ G++E+A  +F  M S  L P +  + SL+     
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377

Query: 351 KGNKAKALHLCEEMVSEGLKPSTSYL 376
            G   K   L  EM++ G+ P+  +L
Sbjct: 378 IGEWKKVEKLSFEMINRGIHPNAIFL 403



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 141/309 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G S  +I+F +LIH +        V ++   M+    +PN   + T++ +LCK G++   
Sbjct: 360 GLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEA 419

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D  D+I      P V+  T LI     + +++E + LL RM+   +  D + YS ++  
Sbjct: 420 HDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNG 479

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ AL +Y EM  +    N+  Y   +      G++  A     ++ ++G++  
Sbjct: 480 YCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLG 539

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N+++ G  +   ++E+L   + + S++       FN MI  L + G    A  + +
Sbjct: 540 INTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFS 599

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L  G  P+ I Y  +I  + +EG ++E  +L+  ME    +       +++  L + G
Sbjct: 600 AILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKG 659

Query: 318 KLEEADKYF 326
            +  A  Y 
Sbjct: 660 DVRRAGTYL 668



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 160/344 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q+GFS +++++ T+I ++ K+ R +     +  M+     P+  T  +LI  LC  G+
Sbjct: 321 MRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGE 380

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +    +   +  +   P  I   +++  + +E R+ E      +++   +  D ++Y++
Sbjct: 381 WKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTI 440

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        ++ ++ +   M+  G   ++  Y+  +  YC+ G++++A  L +EM +  
Sbjct: 441 LIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKD 500

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+N+++ G   A R+  +  +  +++   +    + +N ++  LCE     +A 
Sbjct: 501 VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEAL 560

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M      K F     T++ +I G  K G I +   L+  +    + P    Y  +I S 
Sbjct: 561 RMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSH 620

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + G LEE+D+ F  M+ +          ++V   LEKG+  +A
Sbjct: 621 IEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 162/363 (44%), Gaps = 10/363 (2%)

Query: 16  QRGFSLSLISFNTLIH-VVTKS---DRNDLVWRIYQHMLENIRYPNEATI-RTLISALCK 70
           +RG +    ++ TL+H   TK    D +DL+  + Q  +     P E  +   LI A  K
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGI-----PLEDHVFNILIRAYAK 307

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
              L   +     +  K  SP V+  T++I  + +  R+E+ +    +M+ + +  D I 
Sbjct: 308 NETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIIT 367

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++ +++    +   +    +  EM+ RG   N+    T + + C+ G++ EA+    ++ 
Sbjct: 368 FTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQII 427

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           + G+KP   ++ +LI+G     +++ES+    +M+S  L P    ++ ++   C+ G   
Sbjct: 428 HVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVD 487

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +      K   PN ITY+ ++ G    G +    + Y ++    I   +  Y  ++
Sbjct: 488 DALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVL 547

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             LC+   ++EA + F+ ++S      V  +  ++   L+ G    A  L   ++  GL 
Sbjct: 548 GGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLV 607

Query: 371 PST 373
           P  
Sbjct: 608 PDA 610



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 26/177 (14%)

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECG--------NAKQANGMLTLALDKGFS--PNEITYS 272
           Q+   KL      F  +IR  C  G         ++ +   + +  D G++  PN ++Y+
Sbjct: 84  QVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYN 143

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC---------------- 316
            +I G  KEGE+ +   L++EM  +   P +  Y S+I  LC+                 
Sbjct: 144 MVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDK 203

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G+LEEA +  K M    L P V  Y  L+  + + G   +A ++ + MV  G  P  
Sbjct: 204 GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDA 260



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/167 (18%), Positives = 71/167 (42%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++N ++H +  + R       Y  ++++       T   ++  LC+   +   + M   
Sbjct: 506 ITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQG 565

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K     V     +I+ +++  RI +   L   +L   ++ D I Y L++ + ++   
Sbjct: 566 LRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGL 625

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           LE +  ++  M K G +ANS      +    E G +  A   + +++
Sbjct: 626 LEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKID 672


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 169/357 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   L++F +L++     +R +    ++  +L     PN  T  TLI  LCK   L   
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V++ +++      P V+   +L+  + +  R  +   LL+ M+++ +  + I ++ ++ A
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            VK+  L  A  +Y  M++     + F Y + I   C YG ++EA  +   ME  G  P 
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           +  +  LI G  K+KR+E+ +    +M  + ++ +   +  +I+  C  G    A  +  
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +   P+  TY+ L+ G    G++++ L ++  M  + +   +  YT +I  +C+ G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           K+E+A   F  + S  + P V  Y +++     +G   +A  L ++M  +G  P+ S
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 153/325 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +++++ TLI  + K+   +    ++  M  N   PN  T   L++ LC+ G+    
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  +R  P VI  T+LI   ++  ++ E   L   M++ ++  D   Y  ++  
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 L+ A  ++  M + G   N  +YTT I  +C+  ++E+   +  EM   G+   
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ +LI+G     R + +     QM SR+  P    +N ++  LC  G  ++A  +  
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +    N +TY+ +I G  K G++++   L+  +  K + P +  YT++IS  C+ G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYE 342
            + EAD  FK MK    +P   +Y+
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 137/301 (45%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           Q    +D+  R+   R  P +I  T L+  I +  R +  + L ++M    +       +
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           ++++          A     +M+K GF  +   +T+ +  YC + +IE+A  L  ++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G KP   T+  LI    K + +  ++    QM +    P+   +N ++  LCE G    A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L   + +   PN IT++ LI  + K G++ E  +LY  M   S+ P +  Y SLI+ 
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  G L+EA + F +M+ +   P   IY +L+    +       + +  EM  +G+  +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362

Query: 373 T 373
           T
Sbjct: 363 T 363



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/343 (20%), Positives = 140/343 (40%), Gaps = 4/343 (1%)

Query: 30  IHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRC 89
           +H +  +D  DL    +  M+ +   P+      L+S + K  +    + + +++     
Sbjct: 59  LHNLQFNDALDL----FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGI 114

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
            P++     ++  +    +       L +M++     D + ++ ++        +E A+ 
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA 174

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +++++L  GF  N   YTT I   C+   +  A  L  +M   G +P   T+N L+ G  
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +  R  ++      MM R++ P+   F  +I    + G   +A  +  + +     P+  
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY  LI G    G + E  +++Y ME     P    YT+LI   C+  ++E+  K F  M
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               +V     Y  L+  +   G    A  +  +M S    P 
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 119/260 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R    ++I+F  LI    K  +      +Y  M++   YP+  T  +LI+ LC  
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L     M   +    C P  ++ T+LI    + +R+E+GM +   M +K ++ +TI Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++     +   + A  V+ +M  R    +   Y   +   C  GK+E+A  + + M  
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             +     T+ ++I+G  K  ++E++      + S+ + P+   +  MI   C  G   +
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486

Query: 252 ANGMLTLALDKGFSPNEITY 271
           A+ +     + GF PNE  Y
Sbjct: 487 ADSLFKKMKEDGFLPNESVY 506


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 125 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 178

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 179 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 208

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K++ AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 268

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ TY+ LI G  
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 328

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 388

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM  +G  PS
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPS 421



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 147/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E +++    L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y T I   C+ G ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM     +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHA 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN +   
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 298 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L  K    ++ +V++  I AY 
Sbjct: 24  TMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKLWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K++ A++ F  M    LVP    + +L+  H + G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 263 VDLAMEIYKQMLSQSLLPD 281


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 172/403 (42%), Gaps = 38/403 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A ++ R +   GF  + + + +LIH   KS R      ++  M+E    P+  T   
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LCK G  +      + +    C P V+  T++I  + +  R+     ++K M+   
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE--- 180
              D++ Y  ++    K+  L+ A  + +E+ K   S N  +Y++ +   C+ G +E   
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490

Query: 181 ---------------------------------EANCLMQEMENAGLKPYDETFNLLIEG 207
                                            EA  + Q M + G KP   T+N+LI G
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 208 CAKAK--RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
             +++  R+E + +    +     LP    +  +   LC+ G   +A  ML  A  +G++
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + + Y+ L  G   +G++   + L+ EM  +  +P   AY  +I+ L +  KLE+A K+
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKF 670

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           F  M      P V  Y +LV      GN  +A H  E M++ G
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARG 713



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 160/365 (43%), Gaps = 37/365 (10%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           EQ GF   + ++N L++++         + I++ ML+    PN  +   LI +  +  + 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
              V   + +  KRC P                                   D   + ++
Sbjct: 171 DDAVTCFEIMKRKRCKP-----------------------------------DLHTFLIL 195

Query: 135 VYAKVKMRNLESALVVYEEMLKRGF-SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           V    K    E A  V+ EM+  GF   +  ++T  +    +  +++EA  +  +ME  G
Sbjct: 196 VDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCG 255

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    +N +I+G AKA   +E+L   + M+++  +P+   +  ++  LC+ G  ++A 
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAE 315

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +  +    GF PN + Y+ LI G+AK G ++E   L+ EM      P +  +T +I  L
Sbjct: 316 ELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGL 375

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP-S 372
           C+ G  E+A K F+ M      P V  Y +++    + G  A A  + + M++ G  P S
Sbjct: 376 CKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDS 435

Query: 373 TSYLC 377
            +Y+C
Sbjct: 436 VTYIC 440



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 174/359 (48%), Gaps = 7/359 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLE-NIRYPNEATIRTLISALCKGGQLQTYVDM 80
            L +F  L+  + K+  ++  + ++  M+      P+ A    ++  L K  +++   ++
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV 247

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
             ++      P  I   ++I  + +    +E + +L  ML K  +   + Y ++V +  K
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              LE A  ++  M   GF  NS +YT+ I  + + G+++EA  L  EM  AG +P   T
Sbjct: 308 AGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVIT 367

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
             ++I+G  K+   E++    E+MM     P+   +  +I+ L + G    A  ++   +
Sbjct: 368 HTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             G  P+ +TY  L+ G+ K G + E  +L  E++  S SP L  Y+SL+  LC  G +E
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE 487

Query: 321 EA-DKYFKIMK--SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP-STSY 375
              D  F+  K  + +L PG+     +VG+  + G   +A  + + MVSEG KP +T+Y
Sbjct: 488 NTLDDLFEQSKAAAENLDPGL-CCSIIVGL-CKTGRLDEACRIFQRMVSEGCKPDATTY 544



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 174/409 (42%), Gaps = 38/409 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   +E+ GF    I++NT+I  + K+       ++  +ML     P E T   L++
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LCK G L+   ++   +      P  ++ TSLI    +  R++E   L   M+      
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRP 363

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I +++++    K  N E A   +EEM++ G   N   YTT I    + G++  A  +M
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M   G  P   T+  L++G  K  R++E+    +++      P+   ++ +++ LC+ 
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDG 483

Query: 247 GNAKQA-----------------------------NGMLTLA-------LDKGFSPNEIT 270
           G+ +                                G L  A       + +G  P+  T
Sbjct: 484 GSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT 543

Query: 271 YSHLIGGY--AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           Y+ LI G   ++E  ++    L +++E     P    YT L   LC+ G+++ A K  + 
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE 603

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
             S      V  Y +L      +G   +A+ L +EMV +G  P  +  C
Sbjct: 604 ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYC 652



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 3/304 (0%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ--EERIEEGMVLLKRML 120
           ++I  LCK G+L     +  R+  + C P       LI  + +  E R+E    LL  + 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
               + D + Y+ +     K+  ++ A+ + EE   RG++A+   YT      C  G+++
Sbjct: 571 MVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L QEM   G  P    +  +I G  K K++E++  + ++M+ +   P+ + +  ++
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 241 RRLCECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           + LC  GN  +A       L +G    + + Y  LI G+ K  ++   LKL+ +M  +  
Sbjct: 691 QALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            PT     SL   L + GK E+A +  + M +    P    + +++    +     K L 
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLK 810

Query: 360 LCEE 363
           L +E
Sbjct: 811 LVQE 814



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 8/200 (4%)

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E AG +    T+N L+      K   +  +  E+M+   + P+  +FN +IR       A
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE-MEYKSISPTLPAYTS 308
             A     +   K   P+  T+  L+    K G  ++  ++++E M    + P    +T+
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           ++ +L +  +++EA + F  M+     P    Y +++    + G+  +AL + + M+++ 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 369 LKPS-------TSYLCSAST 381
             P+        + LC A T
Sbjct: 291 CVPTEVTYGILVNSLCKAGT 310


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 174/359 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  +GF L+ +S+ TLI+ V K        ++ + +   +  PN     T+I ALCK   
Sbjct: 403 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 462

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +   +  K  S  V+  ++LI       +++E + LL  M+ K +  D   Y++
Sbjct: 463 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTI 522

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V A  K   ++ A  V   MLK     + F Y T +  Y    ++++A  +   M   G
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+ +LI G  K+K ++E+L+  ++M  + ++P    ++ ++  LC+ G      
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW 642

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++    D+G   + ITY+ LI G  K G + + + L+ +M+ + I P    +T L+  L
Sbjct: 643 DLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G+L++A + F+ + +      V IY  ++  H ++G   +AL +  +M   G  P+
Sbjct: 703 CKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPN 761



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 171/373 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +  A  +   LE +G    L + N LI+      +    + +   +L+    P+  T
Sbjct: 320 MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVT 379

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + TLI  LC  GQ++  +   D++  +      +   +LI  + +       + LL+++ 
Sbjct: 380 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 439

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +    +   YS I+ A  K + +  A  ++ EM  +G SA+   Y+T I  +C  GK++
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLK 499

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L+ EM    + P   T+ +L++   K  +++E+ S    M+   + P    +N ++
Sbjct: 500 EAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLM 559

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                    K+A  +       G +P+  TY+ LI G+ K   + E L L+ EM  K++ 
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV 619

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y+SL+  LC+ G++         M+       V  Y SL+    + G+  KA+ L
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIAL 679

Query: 361 CEEMVSEGLKPST 373
             +M  +G++P+T
Sbjct: 680 FNKMKDQGIRPNT 692



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 166/363 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++ R    ++  ++T+I  + K       + ++  M       +  T  TLI 
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+L+  + +L+ +  K  +P V   T L+  + +E +++E   +L  ML+  +  
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ ++   + +  ++ A  V+  M   G + +   YT  I  +C+   ++EA  L 
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   T++ L++G  K+ RI       ++M  R        +N +I  LC+ 
Sbjct: 611 KEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +     D+G  PN  T++ L+ G  K G +++  +++ ++  K     +  Y
Sbjct: 671 GHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIY 730

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I   C+ G LEEA      M+ +  +P    ++ ++    +K    KA  L  +M++
Sbjct: 731 NVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIA 790

Query: 367 EGL 369
            GL
Sbjct: 791 RGL 793



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/365 (21%), Positives = 157/365 (43%), Gaps = 1/365 (0%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           V+  V   + +RG+    ++ NTLI  +    +       +  +L      N+ +  TLI
Sbjct: 46  VSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI 105

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + +C+ G  +  +  L +I G+   P V +  ++I  + + + + E   L   M  K + 
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + + YS ++Y    +  L+ AL +   M+ +  + N   Y   + A C+ GK++EA  +
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M  A +K    T++ L++G      ++++      M    + P   ++N MI   C+
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCK 285

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  +    +   F P  I ++ ++  +AK       + L + +E K I P L  
Sbjct: 286 IKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFT 344

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
              LI+  C  G++         +      P      +L+     KG   KALH  ++++
Sbjct: 345 LNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLL 404

Query: 366 SEGLK 370
           ++G +
Sbjct: 405 AQGFQ 409



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 2/234 (0%)

Query: 141 MRNLESA--LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           ++N++ A  L V  ++LKRG+  ++    T I   C  G+++EA     ++   G +   
Sbjct: 39  IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++  LI G  +      ++ +  ++  R   P+   +N +I  LC+     +A G+ + 
Sbjct: 99  VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              KG S N +TYS LI G+   G+++E L L   M  K+I+P +  Y  L+ +LC+ GK
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++EA     +M    +   V  Y +L+  +       KA H+   M   G+ P 
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 272



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/338 (21%), Positives = 166/338 (49%), Gaps = 8/338 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIH---VVTKSDRNDLVWRIYQHMLENIRYPNE 58
           +L   A+ +   +  +G S  +++++TLI+   +V K    + +  + + +L+ I  P+ 
Sbjct: 461 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK--LKEAIGLLNEMVLKTIN-PDV 517

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            T   L+ AL K G+++    +L  +      P V    +L+   +    +++   +   
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M    +  D   Y++++    K + ++ AL +++EM ++    ++  Y++ +   C+ G+
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637

Query: 179 IEEANCLMQEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           I     L+ EM + G +P D  T+N LI+G  K   ++++++   +M  + + P+   F 
Sbjct: 638 ISYVWDLIDEMRDRG-QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFT 696

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  LC+ G  K A  +    L KG+  +   Y+ +I G+ K+G ++E L +  +ME  
Sbjct: 697 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEEN 756

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
              P    +  +I++L +  + ++A+K  + M +  L+
Sbjct: 757 GCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 141/295 (47%), Gaps = 1/295 (0%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +L +I  +   P  +   +LI  +  + +++E +    ++L +    + ++Y+ ++  
Sbjct: 48  LSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLING 107

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++ +  +A+    ++  R    N  +Y T I A C+Y  + EA  L  EM   G+   
Sbjct: 108 VCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISAN 167

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ LI G     +++E+L     M+ + + P+   +N ++  LC+ G  K+A  +L 
Sbjct: 168 VVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLA 227

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + L      N ITYS L+ GY    E+++   ++  M    ++P + +Y  +I+  C+  
Sbjct: 228 VMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIK 287

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++++A   FK M   S  P +  +  ++    +  + + A+ L   +  +G++P 
Sbjct: 288 RVDKALNLFKEM-ILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPD 341



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 122/272 (44%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           IQ       + +L ++L++    DT+  + ++        ++ AL  ++++L +GF  N 
Sbjct: 39  IQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQ 98

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C  G    A   +++++    KP  E +N +I+   K + + E+     +
Sbjct: 99  VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M  + +  +   ++ +I   C  G  K+A G+L + + K  +PN  TY+ L+    KEG+
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           ++E   +   M    +   +  Y++L+       ++++A   F  M    + P V  Y  
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNI 278

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           ++    +     KAL+L +EM+     P   +
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFPPIIQF 310


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 165/350 (47%), Gaps = 4/350 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRTLISALCKGGQLQTYVD 79
            +++ NT++  + KS R        +  + ++    PN  T   LI A C+ G +    +
Sbjct: 208 DVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYE 267

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL--KRMLRKNMIHDTIAYSLIVYA 137
           +++++  +     ++   +++  + +  R    +     KR +      + + YS +V A
Sbjct: 268 LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGA 327

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            +   N+  A+ ++ E +  G S ++ +Y T I    + G++E+A  +   M+ AG K  
Sbjct: 328 LLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLD 387

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            + +N+LI G  + KR+ E+    ++M    + P    +N ++   C+ G+    + +L 
Sbjct: 388 TKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLG 447

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +D G  P+ IT+  L+ GY K G+I E L++   M+   I P    Y +LI  LC+ G
Sbjct: 448 KMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRG 507

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            ++ A + F  MK  S+   V  + +L+    +K    KA  L ++M  E
Sbjct: 508 DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREE 557



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 157/362 (43%), Gaps = 13/362 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM--LENIRYPNEATIRTLISALCKGGQLQTYVD 79
            + +FN+++  + +      + RIY  M    ++R P+  T   L++ LCK G++   + 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVR-PDVVTYGILVNGLCKAGRVGDALR 193

Query: 80  MLDRIHGKRCS--PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH----DTIAYSL 133
           +LD +  +     P V+   +++  + +  R++E +  +++  R + +H    +T+ Y+ 
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQ--RMSSVHGCPPNTVTYNC 251

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  ++ N+  A  + E+M   G   N     T +G  C  G+   A    +E     
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311

Query: 194 L--KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
              K    T++ L+        +  ++    + MS    P    +  MI  L + G  + 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  M +   + GF  +   Y+ LI G+ ++  + E  +L  EM+   I P +  Y +L+S
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+ G     D+    M      P V  + +LV  + + G   +AL +   M   G+ P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 372 ST 373
           + 
Sbjct: 492 NN 493



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 86/229 (37%), Gaps = 35/229 (15%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +++ GF L   ++N LI    +  R    + + Q M E    P+  T  T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+S  CK G      ++L ++    C P VI                             
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVIT---------------------------- 460

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                  +  +V+   K+  ++ AL +   M + G   N+ +Y T I   C+ G ++ A 
Sbjct: 461 -------FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            L  EM+   +     TFN L++G       E++    +QM   +  P 
Sbjct: 514 ELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 158/347 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF   + ++N L+H + K         +   M      PN  T   L++ LCK G L+  
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L  +  +  +   ++   LI  + ++E++   + LL  M  K    D   Y+ ++Y 
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A  ++  ML  G  AN+  Y T I A    G  ++A  L+ +M   G    
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI+   K   IE+ L   EQM+   L     + N MI  LC+ G    A   L 
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
            A+++GF P+ +TY+ ++ G  K G I+E L L+  ++ + + P    Y + IS  C+ G
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEG 684

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + +A  +F     +  VP    +  LV   L++ N+     + +E+
Sbjct: 685 MVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 169/358 (47%), Gaps = 5/358 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGF    +++  L+H + +  + +   +I    L  I  PN A + TLI+     GQL+ 
Sbjct: 317 RGFYPDNMTYGFLLHGLCRIGKLNEARKI----LIKIPCPNNAILNTLINGYVMSGQLKE 372

Query: 77  YVDMLDR-IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               L+  +      P +     L+  + +E  +     L+  M R+    + I Y+++V
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILV 432

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   LE A +V  EM  RG + NS +Y   I A C   K+  A  L+ EM   G K
Sbjct: 433 NGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCK 492

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  K  RI+E+      M+    + +   +N +I  L   G  ++A  +
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTL 552

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +   L +G + ++ITY+ LI  + K G I++ L+LY +M    +     +   +I+ LC+
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK++ A ++ +   +   VP +  Y S++    + G   +AL+L + +  EG++P  
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDA 670



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 140/318 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   L+  LCK G L    D+++ +  + C P VI    L+  + +   +EE  ++
Sbjct: 388 PDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M  + +  +++ Y+ ++ A  +   +  AL +  EM  +G   + F Y + I   C+
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCK 507

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             +I+EA  L   M   G    + T+N LI    +    +++L+    M+ R        
Sbjct: 508 VDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKIT 567

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I+  C+ GN ++   +    +  G   + I+ + +I G  K G++    +   +  
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            +   P +  Y S+++ LC+ G+++EA   F  ++   + P    Y + +    ++G   
Sbjct: 628 NRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVN 687

Query: 356 KALHLCEEMVSEGLKPST 373
            A       +  G  PS 
Sbjct: 688 DACLFFYRGIENGFVPSN 705



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 172/405 (42%), Gaps = 40/405 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA +V   +  +G S ++ +F  ++  +   +  D    + + M ++   PN    +TL
Sbjct: 200 QVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTL 259

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I AL +  Q+   + +L+ +    C P V     +I  + +  +I +   L+ RML +  
Sbjct: 260 IHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGF 319

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y  +++   ++  L  A     ++L +    N+ +  T I  Y   G+++EA  
Sbjct: 320 YPDNMTYGFLLHGLCRIGKLNEA----RKILIKIPCPNNAILNTLINGYVMSGQLKEAQS 375

Query: 185 LMQE-MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + E M N G +P   T+N+L+ G  K   +  +     +M  R   P+   +  ++  L
Sbjct: 376 FLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGL 435

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  ++A  +L     +G + N + Y+ LI    ++ ++   L L  EM  K   P L
Sbjct: 436 CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL 495

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV------------------ 345
             Y SLI  LC+  +++EA + F  M     V     Y +L+                  
Sbjct: 496 FTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND 555

Query: 346 ----GIHLEK-------------GNKAKALHLCEEMVSEGLKPST 373
               G  L+K             GN  K L L E+M+ +GL   T
Sbjct: 556 MLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADT 600



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 164/412 (39%), Gaps = 42/412 (10%)

Query: 2   RLFEVAFDVCRYLE-------QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR 54
           +L E+  DV   LE       Q+G+  +   +   I+ +    +  L+ ++   M E   
Sbjct: 84  KLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGI 143

Query: 55  YPNEATIRTLISALCKGGQL-QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE-G 112
              E+    ++    K GQ  Q    +LD      C P    +  L+L I+      +  
Sbjct: 144 VFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEP-TFKSYDLVLEILVTGNCPQVA 202

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
             +   ML K +      + +++ A      ++SA  +  +M K G   NS VY T I A
Sbjct: 203 TNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHA 262

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
             +  ++ EA  L++EM   G  P  +TFN +I G  K  +I ++    ++M+ R   P 
Sbjct: 263 LSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPD 322

Query: 233 CSAFNEMIRRLCECGNAKQA-----------NGMLTLALDK------------------- 262
              +  ++  LC  G   +A           N +L   ++                    
Sbjct: 323 NMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMI 382

Query: 263 --GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             GF P+  TY+ L+ G  KEG +     L  EM  +   P +  Y  L++ LC+ G LE
Sbjct: 383 NFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE 442

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA      M +  L     IY  L+     K     AL+L  EM ++G KP 
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 123/254 (48%), Gaps = 2/254 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            VA ++   +  +G    L ++N+LI+ + K DR D  +R++ +ML +    N  T  TL
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I AL + G  Q  + +++ +  + C+   I    LI    +   IE+G+ L ++M+   +
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DTI+ ++++    K+  +++A     + + RGF  +   Y + +   C+ G+I+EA  
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   ++  G++P   T+N  I    K   + ++  +  + +    +PS   +N ++  L 
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLL 716

Query: 245 ECGNAKQANGMLTL 258
           +  N  Q N    L
Sbjct: 717 KQSN--QENNFFVL 728



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/223 (19%), Positives = 91/223 (40%), Gaps = 39/223 (17%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  +   +  RG +L  I++N LI    K    +    +Y+ M+ +    +  +   
Sbjct: 546 FQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNI 605

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LCK G                                   +++     L+  + + 
Sbjct: 606 MINGLCKVG-----------------------------------KVDNAFEFLRDAINRG 630

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + D + Y+ ++    K+  ++ AL +++ +   G   ++F Y TFI   C+ G + +A 
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA- 689

Query: 184 CLM--QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           CL   + +EN G  P + T+N+L+    K    E +    +++
Sbjct: 690 CLFFYRGIEN-GFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 174/367 (47%), Gaps = 2/367 (0%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +++ G   SL +FN L++ +  S   +   R+++ M      P+  +  T+I   C
Sbjct: 212 VWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYC 271

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G  +  ++    +  +   P  I   +LI     E   +  + L + M  + +     
Sbjct: 272 KAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPH 331

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AYSL++    K         V+E M K+G  AN  +YT  I AY + G + EA  L + M
Sbjct: 332 AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM 391

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           +  G +P D T+ +++ G  K+ R++E++ Y E     ++  +   ++ +I  L + G  
Sbjct: 392 KGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRV 451

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A       +++G   +   Y+ LI   AK G+++E L L+  ME +    T+  YT L
Sbjct: 452 DEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTIL 511

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL-VGIHLEKGNKAKALHLCEEMVSEG 368
           IS L +  + EEA K + +M    + P    + +L VG+ L  G  A+A  + +E+   G
Sbjct: 512 ISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLS-GKVARACKILDELAPMG 570

Query: 369 LKPSTSY 375
           + P T++
Sbjct: 571 VIPETAF 577



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 118/252 (46%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +KN IH    Y  ++       + +    ++ E  ++GF    F   + I ++   G +E
Sbjct: 148 QKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVE 207

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           E   + + M+ +G++P   TFN L+ G   +  IE +    E M   K+ P   ++N MI
Sbjct: 208 ELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMI 267

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +  C+ GN K+A    T    +   P++ITY  LI     EG     L LY EME + + 
Sbjct: 268 KGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLE 327

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
               AY+ +I  LC+ G+  E    F+ M        V IY +L+  + + GN  +A++L
Sbjct: 328 IPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINL 387

Query: 361 CEEMVSEGLKPS 372
            E M  EG +P 
Sbjct: 388 FERMKGEGFEPD 399



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 1/287 (0%)

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           V    SLI        +EE + + +RM    +      ++ ++   V    +ESA  V+E
Sbjct: 190 VFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFE 249

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
            M       +   Y T I  YC+ G  ++A     +ME   L+P   T+  LI+ C    
Sbjct: 250 VMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEG 309

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
             +  L   ++M  R L     A++ +I  LC+ G   + + +      KG   N   Y+
Sbjct: 310 NFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYT 369

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            LI  Y K G + E + L+  M+ +   P    Y  +++ LC+ G+L+EA +YF+  K +
Sbjct: 370 ALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDN 429

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
            +      Y SL+    + G   +A    EEMV  G  P  SY  +A
Sbjct: 430 EVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGC-PQDSYCYNA 475



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 148/331 (44%), Gaps = 8/331 (2%)

Query: 5   EVAFDVCRYL----EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           E  FD C +L    E+RG  +   +++ +I  + K  R      ++++M +     N A 
Sbjct: 308 EGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAI 367

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI A  K G +   +++ +R+ G+   P  +    ++  + +  R++E +   +   
Sbjct: 368 YTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCK 427

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  + + YS ++    K   ++ A   +EEM++RG   +S+ Y   I A  + GK+E
Sbjct: 428 DNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKME 487

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L + ME  G      T+ +LI G  K  R EE+L   + M+ + + P+ ++F  + 
Sbjct: 488 EALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALS 547

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G   +A  +L      G  P E  +  +I    K G  ++  KL   +  +   
Sbjct: 548 VGLCLSGKVARACKILDELAPMGVIP-ETAFEDMINVLCKAGRTEQACKLADGIVDRGRE 606

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
                 T LI++L + G    AD   K+M S
Sbjct: 607 VPGRVRTILINALRKAGN---ADLAMKLMHS 634



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 110/259 (42%), Gaps = 1/259 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   ++  GF    +++  +++ + KS R D     ++   +N    N     +LI 
Sbjct: 384 AINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLID 443

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K G++       + +  + C        +LI  + +  ++EE +VL KRM ++    
Sbjct: 444 GLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQ 503

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y++++    K    E AL +++ M+ +G +  +  +       C  GK+  A  ++
Sbjct: 504 TVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKIL 563

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            E+   G+ P +  F  +I    KA R E++    + ++ R           +I  L + 
Sbjct: 564 DELAPMGVIP-ETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKA 622

Query: 247 GNAKQANGMLTLALDKGFS 265
           GNA  A  ++   +  G+ 
Sbjct: 623 GNADLAMKLMHSKIGIGYD 641


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 141/274 (51%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++   + KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M +  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML K ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GL P   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L+ G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M    + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LDKG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 123/241 (51%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +++++++ VK   +  A  V++ + K     +   + T +  Y + G ++E   L   M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            +G++P   T+++LI G  K  +++++    ++M+ + L+P+   F  +I   C+ G   
Sbjct: 199 VSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +    L +  SP+ ITY+ LI G  K+G++++   L  EM  K + P    YT+LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLI 318

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+ G LE A +Y K M   ++      Y +L+    ++G    A  +  EM++ GLK
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 378

Query: 371 P 371
           P
Sbjct: 379 P 379



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD       R    S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDAITKWSLRP---SVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++     + D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM+ +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M++  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 4/230 (1%)

Query: 146 SALVVYEEMLKRGFSANS--FVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDETFN 202
           SA  V+  +L+   +  S  +V++  I AY E G + +A  C     E+    P+D T  
Sbjct: 47  SASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFD-TCR 105

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++E   K K  +    + E+ +      S   FN ++    + G  + A  +       
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW 165

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              P+ ++++ L+ GY K G++ E  +L   M+   + P +  Y+ LI+ LC+  K+++A
Sbjct: 166 SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  F  M    LVP    + +L+  H + G    A+ + ++M+S+ L P 
Sbjct: 226 NXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 163/351 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++S++T+IH   K       + ++  ML++   PN  T  ++I  LCK   +     +L
Sbjct: 120 DVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVL 179

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  +   P      SLI   +   +  E + +LK M R     + + Y++++    K 
Sbjct: 180 QQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKS 239

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  ++  M++ G   ++  Y + +  Y   G + E N +   M   G++    TF
Sbjct: 240 GFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTF 299

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           ++ I    K  R++E+     +M     +P    +  +I  LC+ G    A       +D
Sbjct: 300 SIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMID 359

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G SPN IT++ LI G++  G+ ++  +L+YEM  + I P +  +T++I  L + GK+ E
Sbjct: 360 DGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTE 419

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A K F +M      P V  Y +++  +   G   + + L ++M+  GLKP+
Sbjct: 420 AQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 470



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 157/362 (43%), Gaps = 3/362 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           + G     ++F  L+  +    R +D +  + + M E    P+  +  TL+  LC   + 
Sbjct: 41  KTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKC 100

Query: 75  QTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +   +++  +   G  C P V+  +++I    +E  + +   L  +ML   +  + +  +
Sbjct: 101 EEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCN 160

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K++ ++ A  V ++M+      N   Y + I  Y   G+  EA  +++EM   
Sbjct: 161 SVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD 220

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   T+N+LI+   K+    E+      M+     P  + +  ++      GN  + 
Sbjct: 221 GQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEM 280

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           N +  L +  G   N  T+S  I  Y K G + E    + +M+     P +  YT++I  
Sbjct: 281 NNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDG 340

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+ G+L++A   F  M    L P +  + +L+      G   KA  L  EM+  G+ P 
Sbjct: 341 LCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPD 400

Query: 373 TS 374
            +
Sbjct: 401 VT 402



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 167/369 (45%), Gaps = 10/369 (2%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEATIRTLISA 67
           V R + + G +  + S++TL+  +    + +    +   M E+     P+  +  T+I  
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 68  LCKGGQL----QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
             K G +      +  MLD  HG    P V+   S+I  + + + +++   +L++M+ ++
Sbjct: 131 FFKEGDVGKAYTLFCKMLD--HG--IPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ +   Y+ +++  +       A+ + +EM + G   N   Y   I   C+ G   EA 
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M  +G KP   T+  L+ G A    + E  +  + M+   +  +   F+  I   
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+CG   +A+         GF P+ +TY+ +I G  K G + + +  + +M    +SP +
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             +T+LI      GK E+A++ F  M    + P V I+ +++    ++G   +A  L + 
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDL 426

Query: 364 MVSEGLKPS 372
           M   G KP+
Sbjct: 427 MPRAGAKPN 435


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 167/368 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +EQ     +++ F+TLI  + K  +    + I+  M+     PN  T  +LI 
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  + +    +++ +   +  P V    +++  + +E  + E   ++  M+ + +  
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 313

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++        ++ A+ V++ M+ +   AN   Y T I  YC+   +++A  L 
Sbjct: 314 NVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLF 373

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    L P   T+N LI G     R+++++S   +M++R  +P    +  +   LC+ 
Sbjct: 374 EEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKN 433

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +  +A  +L       + P+   Y+ ++ G  + GE+++   L+  +  K + P +  Y
Sbjct: 434 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I  LC+ G L EA K F  M  +   P    Y  +    L      + + L EEM++
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553

Query: 367 EGLKPSTS 374
            G     S
Sbjct: 554 RGFSVDVS 561



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 170/368 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + AF     + + G      +F TLI  +    +      ++  M+     PN  T  TL
Sbjct: 122 DFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTL 181

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G     + +L  +    C P V+V ++LI  + ++ ++ E   +   M+ K +
Sbjct: 182 INGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGI 241

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ +++   K+   +    +  EM+      + F   T + A C+ G + EA+ 
Sbjct: 242 SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHD 301

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++  M + G++P   T+N L++G      ++ ++   + M+ +  + +  ++N +I   C
Sbjct: 302 VVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC 361

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  +  +A  +      +  +PN +TY+ LI G    G +Q+ + L++EM  +   P L 
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y +L   LC+   L++A    K ++  +  P + IY +++      G    A  L   +
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481

Query: 365 VSEGLKPS 372
            S+GL+P+
Sbjct: 482 SSKGLQPN 489



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 165/363 (45%), Gaps = 7/363 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S + FN L+  + K+  +  +  + + M      P+  T+  +I++LC   ++      L
Sbjct: 69  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 128

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P     T+LI  +  E +I E + L  +M+ +    + + Y  ++    K+
Sbjct: 129 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKV 188

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N  +A+ +   M +     N  V++T I + C+  ++ EA  +  EM   G+ P   T+
Sbjct: 189 GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G  K    +   +   +M+  K++P     N ++  LC+ G   +A+ ++ + + 
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 308

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  PN +TY+ L+ G+    E+   +K++  M +K     + +Y +LI+  C+   +++
Sbjct: 309 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 368

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-------TS 374
           A   F+ M    L P    Y +L+      G    A+ L  EMV+ G  P        + 
Sbjct: 369 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 428

Query: 375 YLC 377
           YLC
Sbjct: 429 YLC 431



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 161/361 (44%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R ++  G    + +   +I+ +   +R D  +     +L+    P+  T  TLI  LC  
Sbjct: 94  RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVE 153

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++   + + D++ G+   P V+   +LI  + +       + LL+ M + N   + + +
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S ++ +  K R +  A  ++ EM+ +G S N   Y + I   C+  + +    LM EM +
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + + P   T N +++   K   + E+    + M+ R + P+   +N ++   C       
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    + K    N I+Y+ LI GY K   + + + L+ EM  + ++P    Y +LI 
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC  G+L++A   F  M +   +P +  Y +L     +  +  KA+ L + +      P
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453

Query: 372 S 372
            
Sbjct: 454 D 454



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 158/346 (45%), Gaps = 35/346 (10%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G S +++++N+LIH + K      V  +   M+++   P+  T+ T++ 
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G +    D++D +  +   P V+   +L+        ++  + +   M+ K+ + 
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I+Y+ ++    K+++++ A+ ++EEM ++  + N+  Y T I   C  G++++A  L 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 187 QEM-----------------------------------ENAGLKPYDETFNLLIEGCAKA 211
            EM                                   E +   P  + +  +++G  +A
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 212 KRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
             +E++      + S+ L P+   +N MI  LC+ G   +A+ + +     G SPN+ TY
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           + +  G+ +  E    ++L  EM  +  S  +   T L+  L   G
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 150/350 (42%), Gaps = 10/350 (2%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           + FNTL          D     +  ML     P+      L++++ K     T + +  +
Sbjct: 46  LHFNTL----------DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 95

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P V     +I  +    R++     L ++L+     D   ++ ++        
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  AL ++++M+  GF  N   Y T I   C+ G    A  L++ ME    +P    F+ 
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+   K +++ E+ +   +M+++ + P+   +N +I  LC+    K    ++   +D  
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+  T + ++    KEG + E   +   M ++ + P +  Y +L+   C   +++ A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K F  M     V  V  Y +L+  + +  +  KA++L EEM  + L P+T
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 127/281 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV   +  RG   +++++N L+      +  D+  +++  M+      N  +  TLI+
Sbjct: 299 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 358

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK   +   + + + +  +  +P  +   +LI  +    R+++ + L   M+ +  I 
Sbjct: 359 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 418

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y  +     K R+L+ A+ + + +    +  +  +YTT +   C  G++E+A  L 
Sbjct: 419 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             + + GL+P   T+N++I G  K   + E+     +M      P+   +N + R     
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             A +   +L   L +GFS +  T + L+G  + +G  Q V
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 579



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 106/243 (43%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA  V   +  +    ++IS+NTLI+   K    D    +++ M      PN  T  TL
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G+LQ  + +   +  +   P ++   +L   + +   +++ M LLK +   N 
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ I+    +   LE A  ++  +  +G   N + Y   I   C+ G + EA+ 
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM   G  P D T+NL+  G  +      ++   E+M++R      S    ++  L 
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571

Query: 245 ECG 247
           + G
Sbjct: 572 DDG 574



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 90/207 (43%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + TF      +  ++EA      M +    P    FN L+   AK K     LS   QM 
Sbjct: 38  HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 97

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           S  + P       +I  LC       A   L   L  G  P+  T++ LI G   EG+I 
Sbjct: 98  SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 157

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E L L+ +M  +   P +  Y +LI+ LC+ G    A +  + M+  +  P V ++ +L+
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI 217

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               +     +A ++  EM+++G+ P+
Sbjct: 218 DSLCKDRQVTEAFNIFSEMITKGISPN 244


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 169/352 (48%), Gaps = 1/352 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +F +LI  + K  R D  +RIY+ ML+  + PN     +LI    K  + +    M   +
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEM 401

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               CSP +++  + +  + +    E+G  L + +  +  + DT +YS+++++ VK    
Sbjct: 402 MRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFA 461

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                +Y  M  +G   ++  Y T I  +C+ GK+ +A  L++EM+  G  P   T+  +
Sbjct: 462 RETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV 521

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++G AK  R++E+    E+  S  +  +   ++ +I    + G   +A  ++   + KG 
Sbjct: 522 VDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGL 581

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +PN  T++ L+ G  K  EI E L  +  M+    +P    Y  LI+ LC+  K  +A  
Sbjct: 582 TPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFV 641

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM-VSEGLKPSTSY 375
           +++ M+   L P    Y +++    + GN A+A  L E    S G+  S SY
Sbjct: 642 FWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASY 693



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 158/369 (42%), Gaps = 36/369 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  +   ++   F   ++ +N  I    K  + D+ W+ +  M  N   P++ T  ++
Sbjct: 113 DAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSM 172

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  LCK  +L   V++ +++   R  P      ++I+      + +E   LL+R   K  
Sbjct: 173 MGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGC 232

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I   +AY+ I+    K    + AL ++EEM KR    N   Y   IG  C+ G +E A  
Sbjct: 233 IPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFK 291

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +   M+ AGL P   T N++I+   KA++++E               +CS F  M  ++C
Sbjct: 292 VRDAMKEAGLFPNVRTINIMIDRLCKAQKLDE---------------ACSIFEGMDYKVC 336

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                               SP+  T+  LI G  K+G + +  ++Y  M      P + 
Sbjct: 337 --------------------SPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVV 376

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YTSLI +  +C + E+  K +K M      P + +  + +    + G   K   L EE+
Sbjct: 377 VYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEI 436

Query: 365 VSEGLKPST 373
            + G  P T
Sbjct: 437 KARGFLPDT 445



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 173/370 (46%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +      +G   S++++N ++  + K  + D   RI++ M  +   PN  T   
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA-MPNLPTYNI 275

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LCK G ++    + D +      P V     +I R+ + ++++E   + + M  K 
Sbjct: 276 IIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV 335

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D   +  ++    K   ++ A  +YE ML      N  VYT+ I  + +  + E+ +
Sbjct: 336 CSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH 395

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM  +G  P     N  ++   KA   E+  +  E++ +R  LP   +++ +I  L
Sbjct: 396 KMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSL 455

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A++   +     D+G   +   Y+ +I G+ K G++ +  +L  EM+     PT+
Sbjct: 456 VKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTV 515

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S++  L +  +L+EA   F+  KS+ +     IY SL+    + G   +A  + EE
Sbjct: 516 VTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEE 575

Query: 364 MVSEGLKPST 373
           M+ +GL P+ 
Sbjct: 576 MMQKGLTPNV 585



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 166/369 (44%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF V   +++ G   ++ + N +I  + K+ + D    I++ M   +  P+ AT  +L
Sbjct: 287 EAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSL 346

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K G++     + +R+      P V+V TSLI    + +R E+G  + K M+R   
Sbjct: 347 IDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGC 406

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D +  +  +    K    E    ++EE+  RGF  ++  Y+  I +  + G   E   
Sbjct: 407 SPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYE 466

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   M++ G       +N +I+G  K+ ++ ++    E+M +    P+   +  ++  L 
Sbjct: 467 LYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLA 526

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  +   A   G   N++ YS LI G+ K G + E   +  EM  K ++P + 
Sbjct: 527 KIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVY 586

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +  L+  L +  ++ EA   F+ MK     P    Y  L+    +     KA    +EM
Sbjct: 587 TWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEM 646

Query: 365 VSEGLKPST 373
             +GLKP+T
Sbjct: 647 QKQGLKPNT 655



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/376 (21%), Positives = 166/376 (44%), Gaps = 1/376 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+ + +    F  +  ++ TLI  +++   +D +  ++  M E     N   + TLI 
Sbjct: 45  AFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIR 104

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              + G++   + +LD +        +++    I    +  +++        M    ++ 
Sbjct: 105 VFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVP 164

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++    K   L+ A+ ++E+M +      ++ Y T I  Y   GK +EA  L+
Sbjct: 165 DDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLL 224

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +     G  P    +N ++    K  + +++L   E+M  R  +P+   +N +I  LC+ 
Sbjct: 225 ERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKA 283

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN + A  +     + G  PN  T + +I    K  ++ E   ++  M+YK  SP    +
Sbjct: 284 GNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATF 343

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SLI  L + G++++A + ++ M     +P V +Y SL+    +   K     + +EM+ 
Sbjct: 344 CSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMR 403

Query: 367 EGLKPSTSYLCSASTC 382
            G  P    L +   C
Sbjct: 404 SGCSPDLMLLNTYMDC 419



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 4/314 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G S  L+  NT +  V K+   +    +++ +      P+  +   LI +L K G  +
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFAR 462

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH--DTIAYSL 133
              ++   +  + C        ++I    +  ++ +   LL+ M  K M H    + Y  
Sbjct: 463 ETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM--KTMGHHPTVVTYGS 520

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K+  L+ A +++EE    G   N  +Y++ I  + + G+++EA  +M+EM   G
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N L++G  KA+ I E+L   + M   K  P+   +  +I  LC+     +A 
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAF 640

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                   +G  PN ITY+ +I G AK G + +   L+         P   +Y ++I  L
Sbjct: 641 VFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL 700

Query: 314 CQCGKLEEADKYFK 327
               +  +A + F+
Sbjct: 701 SIANRALDAYQLFE 714



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 141/309 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ RGF     S++ LIH + K+      + +Y  M +     +     T+I   CK G+
Sbjct: 436 IKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGK 495

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +L+ +      P V+   S++  + + +R++E  +L +      +  + + YS 
Sbjct: 496 VNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSS 555

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++ A +V EEM+++G + N + +   +    +  +I EA    Q M++  
Sbjct: 556 LIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLK 615

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+ +LI G  K ++  ++  + ++M  + L P+   +  MI  L + GN  QA+
Sbjct: 616 CTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQAS 675

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G  P+  +Y+ +I G +      +  +L+ E   K  S       +L+ +L
Sbjct: 676 SLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDAL 735

Query: 314 CQCGKLEEA 322
            +   LE+A
Sbjct: 736 HKAECLEQA 744



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 104/228 (45%), Gaps = 4/228 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++  G   +++++ +++  + K DR D  + +++    N    N+    +LI 
Sbjct: 499 AYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLID 558

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +++ +  K  +P V     L+  +++ E I E +V  + M       
Sbjct: 559 GFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTP 618

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y +++    K+R    A V ++EM K+G   N+  YT  I    + G + +A+ L 
Sbjct: 619 NQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLF 678

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           +    +G  P   ++N +IEG + A R  ++     Q+     L  CS
Sbjct: 679 ERFRASGGIPDSASYNAMIEGLSIANRALDAY----QLFEETRLKGCS 722



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 103/242 (42%)

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V + VK R L  A  + + M    F      YTT IGA  E G+ +    L  +M+  G
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +        LI   ++  R++ +LS  ++M S         +N  I    + G    A 
Sbjct: 92  YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                    G  P+++TY+ ++G   K   + E ++++ +ME     P   AY ++I   
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGY 211

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              GK +EA    +  ++   +P V  Y  ++    +KG   KAL + EEM  + +    
Sbjct: 212 GSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLP 271

Query: 374 SY 375
           +Y
Sbjct: 272 TY 273



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 87/180 (48%)

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++ EM  AG  P + T   L+  C K++++ E+    + M   K  P+ SA+  +I  L 
Sbjct: 13  ILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALS 72

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E G + +   +     + G+  N    + LI  +++EG +   L L  EM+  +    + 
Sbjct: 73  EVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIV 132

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y   I    + GK++ A K+F  MK++ LVP    Y S++G+  +     +A+ + E+M
Sbjct: 133 LYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQM 192



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 102/246 (41%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           V+ RN +    +  EM   GF   ++     + +  +  K+ EA  L+Q M +   +P  
Sbjct: 2   VRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAF 61

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
             +  LI   ++    +  L+   QM       +      +IR     G    A  +L  
Sbjct: 62  SAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDE 121

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
                F  + + Y+  I  + K G++    K ++EM+   + P    YTS++  LC+  +
Sbjct: 122 MKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANR 181

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           L+EA + F+ M+ +  VP    Y +++  +   G   +A  L E   ++G  PS      
Sbjct: 182 LDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNC 241

Query: 379 ASTCRG 384
             TC G
Sbjct: 242 ILTCLG 247


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/400 (23%), Positives = 176/400 (44%), Gaps = 32/400 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   L   G     +S+ TL+  +  S R D V  ++  M+E    PNE T   LI 
Sbjct: 231 ARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR 290

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+GG ++  + +L ++    C+    +   +I  I ++ R+++    L  M       
Sbjct: 291 FFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNP 350

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DTI+Y+ ++    +      A  + +EM++     N   + TFI   C+ G IE+A  L+
Sbjct: 351 DTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 410

Query: 187 QEMENAG--------------------------------LKPYDETFNLLIEGCAKAKRI 214
           ++M+  G                                 KP   T+  L+ G   A+R+
Sbjct: 411 EQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERL 470

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           + +     +M+ R   P+   FN ++   C+ G   +A  ++   ++ G +PN ITY+ L
Sbjct: 471 DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTL 530

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
             G  K+   ++ L+L + +  K +SP +  ++S+I  L +  ++EEA + F + +   +
Sbjct: 531 FDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGM 590

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            P   +Y  ++    ++     A+     MVS G  P+ S
Sbjct: 591 RPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNES 630



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 171/357 (47%), Gaps = 3/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG   +++++  L+  + K+   +    +   M      PN  T   +I+ +C+ G++ 
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              D+L+R+    C P  +  T+L+  +   +R ++   L   M+ KN + + + + +++
Sbjct: 230 DARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 289

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +   +E A+ V ++M +   + N+ +    I + C+ G++++A   +  M + G  
Sbjct: 290 RFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCN 349

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++  +++G  +A+R  ++    ++M+     P+   FN  I  LC+ G  +QA  +
Sbjct: 350 PDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 409

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    + G +   +TY+ L+ G+  +G I   L+L+  M  K   P    YT+L++ LC 
Sbjct: 410 IEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCN 466

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             +L+ A +    M      P V  +  LV    +KG   +A+ L E+M+  G  P+
Sbjct: 467 AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPN 523



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 6/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R  E  G  + + ++NTL+    +    D   R+   M      P+  T   LI 
Sbjct: 94  AARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIR 150

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC  G++   + +LD +  + C P V+  T L+  + +    E+ M +L  M  K    
Sbjct: 151 VLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTP 210

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++I+    +   ++ A  +   +   G   ++  YTT +   C   + ++   L 
Sbjct: 211 NIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELF 270

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM      P + TF++LI    +   +E ++   +QM   +   + +  N +I  +C+ 
Sbjct: 271 AEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQ 330

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A   L      G +P+ I+Y+ ++ G  +     +  +L  EM   +  P    +
Sbjct: 331 GRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTF 390

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            + I  LCQ G +E+A    + M+ H    GV  Y +LV     +G+   AL L   M  
Sbjct: 391 NTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPC 450

Query: 367 EGLKPST 373
              KP+T
Sbjct: 451 ---KPNT 454



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 3/329 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF     +   G +   IS+ T++  + +++R +    + + M+ N   PNE T  T I 
Sbjct: 336 AFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFIC 395

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G ++  + +++++    C+  V+   +L+     +  I+  + L + M  K    
Sbjct: 396 ILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---P 452

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +TI Y+ ++        L++A  +  EML R    N   +   +  +C+ G ++EA  L+
Sbjct: 453 NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELV 512

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   G  P   T+N L +G  K    E++L     ++S+ + P    F+ +I  L + 
Sbjct: 513 EQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKE 572

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A  M  LA D G  P  + Y+ ++ G  K  EI   +     M      P    Y
Sbjct: 573 DRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTY 632

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV 335
             LI  L + G L+EA     ++ S  +V
Sbjct: 633 IILIEGLAREGLLKEAQDLLSMLCSRGVV 661



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 4/221 (1%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   + F Y T +  YC YG ++ A  L+  M  A   P   T+  LI       R+ ++
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADA 161

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           LS  + M+ R   P+   +  ++  +C+    +QA  +L     KG +PN +TY+ +I G
Sbjct: 162 LSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 221

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
             +EG + +   L   +      P   +YT+L+  LC   + ++ ++ F  M   + +P 
Sbjct: 222 MCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 281

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
              ++ L+      G   +A+ + ++M       +T+ LC+
Sbjct: 282 EVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTT-LCN 321



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 3/135 (2%)

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
           ++IR LC  G    A  +L  A   G   +   Y+ L+ GY + G +    +L   M   
Sbjct: 80  KLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM--- 136

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            ++P    YT LI  LC  G++ +A      M      P V  Y  L+    +     +A
Sbjct: 137 PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQA 196

Query: 358 LHLCEEMVSEGLKPS 372
           + + +EM ++G  P+
Sbjct: 197 MAVLDEMRAKGCTPN 211


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 157/347 (45%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           + T++H +  + R      +    +     PN      LI   C  G L+  VD+ +R+ 
Sbjct: 180 YATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMD 239

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
              CSP V   T LI    +  +++  M+L  RM+   ++ + + Y+ ++  +     L+
Sbjct: 240 VNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLD 299

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  + + M   G   N +  +  I A C++ ++ EA  L+  +   G+K  +  +  LI
Sbjct: 300 CAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLI 359

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
           +G  KA R   +    + ++S+  +P    ++ +I  LC      +A  +L   ++KG  
Sbjct: 360 DGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQ 419

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ +TY+ +I    +E       K+  +M    I P +  YT  + S C  G++E+A+  
Sbjct: 420 PSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHM 479

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              M  H + P +  Y +L+  +   G  ++A    + MV+ G KP+
Sbjct: 480 MLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPN 526



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 160/356 (44%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG   +  ++  L+H +  +        ++  M  +   P+     T++  LC  G+ + 
Sbjct: 136 RGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTRE 195

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L     +   P V+V  +LI        +E  + + +RM       +   Y+ ++ 
Sbjct: 196 AETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELIS 255

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K R L+ A++++  M+  G   N   YT  I   C  G+++ A  L+Q MEN+GL P
Sbjct: 256 GFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVP 315

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
            + T ++LI+   K +R+ E+      ++ + +  +   +  +I  LC+ G    A+ ++
Sbjct: 316 NEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLM 375

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              + +GF P+  TYS LI G  ++ E+ E + +  +M  K + P+   YT +I  L + 
Sbjct: 376 QTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVRE 435

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              + + K    M +  + P V  Y   V  +  +G    A H+   MV  G+ P+
Sbjct: 436 VGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPN 491



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/419 (21%), Positives = 168/419 (40%), Gaps = 51/419 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E+A DV   ++  G S ++ ++  LI    KS + D    ++  M++    PN  T   
Sbjct: 228 LELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTA 287

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C  GQL     +L  +      P     + LI  + + ER+ E  +LL  +++K 
Sbjct: 288 LIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKG 347

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I Y+ ++    K     +A  + + ++ +GF  ++  Y++ I   C   ++ EA 
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM 407

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ +M   G++P   T+ ++I+   +    + S    ++M++  + P    +   +R  
Sbjct: 408 LVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSY 467

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G  + A  M+   +D G  PN +TY+ LI GYA  G   +    +  M      P  
Sbjct: 468 CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527

Query: 304 PAYTSL---------------------------------------------------ISS 312
            +YT L                                                   ++S
Sbjct: 528 ESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTS 587

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           LC+  +L+EA      M+S +L P  D+Y S++          +AL   + MV  G  P
Sbjct: 588 LCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIP 646



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 150/334 (44%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +++ +N LI         +L   +++ M  N   PN  T   LIS  CK  +L   
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +  R+      P V+  T+LI     + +++    LL+ M    ++ +    S+++ A
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDA 326

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   +  A ++   ++++G   N  VYT+ I   C+ G+   A+ LMQ + + G  P 
Sbjct: 327 LCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPD 386

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ LI+G  + K + E++   + MM + + PS   +  +I  L     A  +  +L 
Sbjct: 387 AHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILD 446

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +  G  P+  TY+  +  Y  EG +++   +   M    + P L  Y +LI      G
Sbjct: 447 KMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLG 506

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
              +A   FK M ++   P  + Y  L+ + ++K
Sbjct: 507 LTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKK 540



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 1/248 (0%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ ++ A     +L ++      +L+ GF+ +S  YT+F+  YC  G +  A  L   M 
Sbjct: 75  YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMP 134

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G      T+  L+ G   A  + E++S    M +    P    +  M+  LC  G  +
Sbjct: 135 LRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTR 194

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L+ A+ +GF PN + Y+ LI GY   G+++  + ++  M+    SP +  YT LI
Sbjct: 195 EAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELI 254

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S  C+  KL+ A   F  M    LVP V  Y +L+      G    A  L + M + GL 
Sbjct: 255 SGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLV 314

Query: 371 PSTSYLCS 378
           P+  + CS
Sbjct: 315 PN-EWTCS 321



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 142/356 (39%), Gaps = 37/356 (10%)

Query: 54  RYP--NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE 111
           R P  N  T  TLI+A C  G L      L  +     +P     TS ++   +   +  
Sbjct: 66  RMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAH 125

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
              L   M  +  +     Y+ +++       +  A+ V+  M   G + +  VY T + 
Sbjct: 126 ACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVH 185

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             C  G+  EA  L+ +    G +P    +N LI+G      +E ++   E+M      P
Sbjct: 186 GLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSP 245

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +   + E+I   C+     +A  + +  +D G  PN +TY+ LI G   +G++    +L 
Sbjct: 246 NVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLL 305

Query: 292 YEMEYKSISPT-------LPA----------------------------YTSLISSLCQC 316
             ME   + P        + A                            YTSLI  LC+ 
Sbjct: 306 QSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKA 365

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           G+   AD+  + + S   VP    Y SL+     +   ++A+ + ++M+ +G++PS
Sbjct: 366 GRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 19/274 (6%)

Query: 48  HMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE 107
           HM+++   PN  T   LI      G           +    C P                
Sbjct: 482 HMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKP---------------- 525

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
             E   VLL+ +++K   ++  A S+ ++   +M+ L   L   EEM+K    +   +Y 
Sbjct: 526 NEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLL---EEMVKLQLPSEIDIYN 582

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
            F+ + C   +++EA  L+ EM++A L P ++ +  +I  C + K + E+L++ + M+  
Sbjct: 583 CFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS 642

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             +P   ++  +I  LCE G+ + A  +    L K ++  EI +  LI G  ++G + E 
Sbjct: 643 GYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAEC 702

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
             L   ME K+  P+   Y  L   +     ++E
Sbjct: 703 SSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/384 (20%), Positives = 144/384 (37%), Gaps = 51/384 (13%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L Q+G  ++ I + +LI  + K+ R     R+ Q ++     P+  T  +LI  LC+  +
Sbjct: 343 LIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKE 402

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   + +LD +  K   P  +  T +I  +++E   +    +L +M+   +  D   Y++
Sbjct: 403 LSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTI 462

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            V +      +E A  +   M+  G   N   Y   I  Y   G   +A    + M   G
Sbjct: 463 FVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG 522

Query: 194 LKPYDETFNLL----------------------------------------------IEG 207
            KP +E++ +L                                              I  
Sbjct: 523 CKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYN 582

Query: 208 C-----AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           C      +  R++E+     +M S  L PS   +  +I   C      +A   +   +  
Sbjct: 583 CFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS 642

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G+ P   +Y H+I    +EG IQ   +++ +M  K  +    A+  LI  L Q G + E 
Sbjct: 643 GYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAEC 702

Query: 323 DKYFKIMKSHSLVPGVDIYESLVG 346
                +M+  +  P   +Y  L G
Sbjct: 703 SSLLSVMEEKNYRPSDALYARLTG 726



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 4/173 (2%)

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N  +   A+ + + +  S+  +M +R L      +  +I   C  G+   +   L+  L
Sbjct: 44  LNAFLMALARHRMLADMESFASRMPARNL----RTYTTLINAYCLAGDLPASKRHLSSLL 99

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
             GF+P+   Y+  + GY + G +    +L+  M  +    T   YT+L+  LC  G + 
Sbjct: 100 RAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVR 159

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA   F  M++    P   +Y ++V      G   +A  L  + ++EG +P+ 
Sbjct: 160 EAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNV 212


>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
 gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           virgata]
          Length = 418

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 140/274 (51%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  +E  I    ++   + +  +    ++++ ++   +++ +L+    +   M   G
Sbjct: 142 LMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI G  K +R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA+ ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGC 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P  
Sbjct: 322 CKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDT 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 415



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     +  
Sbjct: 97  FWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   + G L     +   +H     P V   + LI  +
Sbjct: 157 LVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML K ++ + + ++ ++    K R ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A+ L+ EM   GLKP   T+  LI+GC K   +E +  + ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G    A  +L   L  G  P+  TY+ +I  + K+G+
Sbjct: 337 MIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGHVPSV 416



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L  G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  +   ++E       M +  + P    ++ +I  LC+      ANG+   
Sbjct: 172 VSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LDKG  PN +T++ LI G+ K   +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 292 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIR 343



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ ++ F+    + + G   S++SFNTL++   +    D  +R+   M  +   P+  T
Sbjct: 152 IRVAQLVFNA---ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++     + D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G  P+ ++
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 78  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++++ L+ GY + G++ E  +L   
Sbjct: 137 YFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A+  F  M    LVP    + +L+  H +   
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 119 LVWGFYEDILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 172

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 173 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 202

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 262

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ L P    +N +I  LC+ G+ KQA+ ++     KG  P++ TY+ LI G  
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 322

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P + 
Sbjct: 323 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIG 382

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM   G  PS
Sbjct: 383 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPS 415



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 150/312 (48%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 114 LKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 173

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 174 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +  S +   Y T I   C+ G ++
Sbjct: 234 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 294 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 353

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+    +
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHA 413

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 414 PSVVTYNVLMNG 425



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YE++L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 292 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 343



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + +   AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E ++      S 
Sbjct: 78  ESGFLRDAIECYTLTREHKLWVPFD-TCRKVLEHLMKLKYFKLVWGFYEDILECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 137 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 179/387 (46%), Gaps = 12/387 (3%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATI 61
           LF+ +  V   ++  G S S+++FN+L+ ++ K  R ++  ++Y  ML      P+  T 
Sbjct: 164 LFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTF 223

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C  G +     + + +    C P V+   +L+  + +  ++     ++K M +
Sbjct: 224 NILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGK 283

Query: 122 K--NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           K  ++  + + Y+ ++      R +E AL V+EEM+ +G  AN+  Y T I   CE  K 
Sbjct: 284 KSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKF 343

Query: 180 EEANCLMQEMENAG-LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           E+   +++     G   P   TFN L+     A  ++++L   E+M   K+ P  + ++ 
Sbjct: 344 EKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSA 403

Query: 239 MIRRLCECGNAKQANGMLTLALDK-------GFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           ++R LC+ G+ ++A  +L   L++       G  P    Y+ +     + G+ ++  K +
Sbjct: 404 LVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF 463

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            ++  +      P+Y +LI   C+ G  E   +   +M     +P  + YESL+   L  
Sbjct: 464 RQLMRRGTQDP-PSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHM 522

Query: 352 GNKAKALHLCEEMVSEGLKPSTSYLCS 378
                AL   E+M+    +P++S   S
Sbjct: 523 DKPLLALQSLEKMLRSSHRPNSSTFHS 549



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 136/347 (39%), Gaps = 56/347 (16%)

Query: 2   RLFEVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           R FE   D+       G FS    +FNTL+H    +   D   ++++ M E    P+ AT
Sbjct: 341 RKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSAT 400

Query: 61  IRTLISALCKGGQLQTYVDMLDRI-------HGKRCSPMVIVNTSLILRIIQEERIEEGM 113
              L+ +LC+GG  +   D+LD++        G  C P+V                    
Sbjct: 401 YSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVA------------------- 441

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
                           AY+ I     +    + A   + ++++RG + +   Y T I  +
Sbjct: 442 ----------------AYNPIFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGH 484

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           C+ G  E    L+  M      P  ET+  LI G     +   +L   E+M+     P+ 
Sbjct: 485 CKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNS 544

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS----HLIGGYAKEGEIQEVLK 289
           S F+ ++ +L E G   ++  ++ L LDK    N +++S     L+ G     +  +++ 
Sbjct: 545 STFHSILAKLLEQGRTSESASLIQLMLDKNIRQN-LSFSTGCVRLLFGAGMNDKAFQLVH 603

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI-MKSHSLV 335
           L Y   Y            LI  LC C K+ +  K     ++SH  V
Sbjct: 604 LLYGKGYSV------KMEELIRYLCHCRKVIQGSKLLLFSLESHQFV 644


>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
          Length = 542

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 137/264 (51%), Gaps = 1/264 (0%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +   + +L  M+   ++ D + Y+ ++ A     +LE A  ++++++  G   ++ +YT 
Sbjct: 216 LNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTV 275

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  YC + K+++A  +M EM  AG++P + T++++IE C K ++  E+     +M+   
Sbjct: 276 LIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCKERKSTEARDLTREMLGAG 335

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            +P      +++  LC+ G A +AN M    + K   P+    S LI    K+G +QE  
Sbjct: 336 YVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEAR 395

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           KL+ E+E +   P+L  Y SLI  LC+ G+L+EA + +  M      P    YE+L+   
Sbjct: 396 KLFDELE-RGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGF 454

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            + G   +   L +EM+S G  PS
Sbjct: 455 CKIGKSNEGYALFKEMMSRGCTPS 478



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 3/295 (1%)

Query: 22  SLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           +L+S N L+  +V   D N  + ++   M+     P+  T  T+++A C  G L+    +
Sbjct: 199 NLVSCNILLKGLVGIGDLNSAL-KVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQL 257

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
            D I      P   + T LI       ++++   ++  M    +  + + YS+++ A  K
Sbjct: 258 FDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEACCK 317

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            R    A  +  EML  G+  ++ +    +   C+ GK  EAN + ++M    + P +  
Sbjct: 318 ERKSTEARDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTV 377

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            + LI    K   ++E+    +++  R  LPS   +N +I  LCE G  ++A  +    +
Sbjct: 378 VSTLIYWLCKKGMVQEARKLFDEL-ERGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMV 436

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           ++ + PN +TY  LI G+ K G+  E   L+ EM  +  +P+   Y +L+ SL +
Sbjct: 437 ERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSK 491



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 107/244 (43%), Gaps = 1/244 (0%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           +++  ++ + R P+      LI   C   +LQ    ++D +      P  +  + +I   
Sbjct: 256 QLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEAC 315

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E +  E   L + ML    + DT   + +V    +      A  ++ +M+K+    ++
Sbjct: 316 CKERKSTEARDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQMVKKSVPPDN 375

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
            V +T I   C+ G ++EA  L  E+E  G  P   T+N LI G  +   ++E+    + 
Sbjct: 376 TVVSTLIYWLCKKGMVQEARKLFDELER-GFLPSLLTYNSLIIGLCENGELQEAGRVWDD 434

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+ R+  P+   +  +I+  C+ G + +   +    + +G +P++  Y  L+   +K   
Sbjct: 435 MVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSKPSH 494

Query: 284 IQEV 287
              V
Sbjct: 495 DDTV 498



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 1/150 (0%)

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           + P+  + N +++ L   G+   A  +L   +  G  P+ +TY+ ++  Y  +G+++   
Sbjct: 196 ITPNLVSCNILLKGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQ 255

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +L+ ++      P    YT LI   C   KL++A +    M +  + P    Y  ++   
Sbjct: 256 QLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAGVQPNEVTYSVVIEAC 315

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            ++    +A  L  EM+  G  P T  LC+
Sbjct: 316 CKERKSTEARDLTREMLGAGYVPDTP-LCA 344



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 41/85 (48%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF  SL+++N+LI  + ++       R++  M+E    PN  T   LI   CK G+  
Sbjct: 402 ERGFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVERRYEPNAMTYEALIKGFCKIGKSN 461

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLI 100
               +   +  + C+P   +  +L+
Sbjct: 462 EGYALFKEMMSRGCTPSKFLYQALV 486


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 159/371 (42%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A +V   +EQ G   +++++NT++    K  R D    +   M E   YPN+ T  
Sbjct: 195 LLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYN 254

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++ L K G+L+    +++ +     +        LI    Q+    E   L++ M+ +
Sbjct: 255 VLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNR 314

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y+ ++Y   K   +    + + +MLK  F+ +   + + +  YC  G I EA
Sbjct: 315 RAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA 374

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  E++   L P   T+N LI G      ++ +L   ++M  + L P    +  ++  
Sbjct: 375 FLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + G    A G     L KG  P+   Y+  I G  K  +      +  EM      P 
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPD 494

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y   + +LCQ G  EEA    + M S  L+P    Y S++   ++ G+  KA  +  
Sbjct: 495 VITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFN 554

Query: 363 EMVSEGLKPST 373
           EM+S+G+ PS 
Sbjct: 555 EMLSKGVAPSV 565



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 169/371 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LF  AFD+   +  R    +L ++NTL++ + K  +   V   +  ML++   P+  +  
Sbjct: 300 LFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFN 359

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +L+   C+ G +     + D +  +   P VI   +LI  +     ++  + L K M  +
Sbjct: 360 SLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ 419

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y+++V    K+  +  A   + EML +G   + F Y T I    +      A
Sbjct: 420 GLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVA 479

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             + +EM  AG  P   T+N+ +    +    EE+    E M+S  L+P    +  +I  
Sbjct: 480 FSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIING 539

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + G+ ++A  +    L KG +P+ +TY+ LI  +A +  +      + +M  KS+   
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPAN 599

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y ++I+ LC   +++EA KYF  M+   ++P    Y  L+      G   +AL L  
Sbjct: 600 VITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYR 659

Query: 363 EMVSEGLKPST 373
           EM+   ++P +
Sbjct: 660 EMLDRKIQPDS 670



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 6/310 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   L+ R    ++I++NTLIH +      D   R+ + M +   +P+  T   L++
Sbjct: 374 AFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVN 433

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV---LLKRMLRKN 123
              K G +       + +  K   P      +   RI+ E +I +  V   + + ML   
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT---RIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++ V+A  +  N E A  + E M+  G   +   YT+ I  + + G + +A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  EM + G+ P   T+ +LI   A  + ++ +  Y  +M+ + +  +   +N +I  L
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A        +KG  PN+ +Y+ LI      G  +E L+LY EM  + I P  
Sbjct: 611 CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670

Query: 304 PAYTSLISSL 313
             ++  + +L
Sbjct: 671 FTHSVFLKNL 680



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%)

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M+   LLP     N ++R L +     +A  +  +    G  P  +TY+ ++  Y KE
Sbjct: 169 DKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKE 228

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + + L+L  EM+ +   P    Y  L++ L + G+LE+A    + M +  L      Y
Sbjct: 229 GRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTY 288

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             L+    +KG   +A  L EEMV+    P+ S
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 10/255 (3%)

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           VI +  L +R++   RI   + L  R  R  M       S  V+  +        ++V  
Sbjct: 81  VITDPHLFIRVLHSMRIRPRVAL--RFFRWVMAQPDFKESEFVFCAIL------DILVGN 132

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM--QEMENAGLKPYDETFNLLIEGCAK 210
           +++   +     V +  +    +        CL+   +M   GL P  +  N ++     
Sbjct: 133 DLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRD 192

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              + ++ +    M    + P+   +N M+   C+ G   QA  +L+   ++G  PN++T
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT 252

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ L+ G +K+GE+++   L  EM    ++ +   Y  LI+  CQ G   EA    + M 
Sbjct: 253 YNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV 312

Query: 331 SHSLVPGVDIYESLV 345
           +    P +  Y +L+
Sbjct: 313 NRRAFPTLSTYNTLM 327



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/222 (18%), Positives = 89/222 (40%), Gaps = 35/222 (15%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VAF +   +   GF   +I++N  +H + +    +    + ++M+ +   P+  T  ++I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI------------------------- 100
           +   K G L+   ++ + +  K  +P V+  T LI                         
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597

Query: 101 LRIIQEERIEEGMVLLKRMLR----------KNMIHDTIAYSLIVYAKVKMRNLESALVV 150
             +I    I  G+ + +RM            K ++ +  +Y++++     M   E AL +
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRL 657

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           Y EML R    +SF ++ F+       ++    C+   ++N 
Sbjct: 658 YREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNV 699


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 170/356 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  +GF L  +S+ TLI+ + K+     V R+ + +  +   P+     T+I++LCK   
Sbjct: 153 LVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKL 212

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    D+   +  K  SP V+  T+LI        ++E   LL  M  KN+  +   +++
Sbjct: 213 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNI 272

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K   ++ A ++   M+K     + F Y + I  Y    +++ A  +   M   G
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG 332

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P  + +  +I G  K K ++E++S  E+M  + ++P    +N +I  LC+  + ++A 
Sbjct: 333 VTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAI 392

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G  P+  +Y+ L+ G  K G +++  +++  +  K     + AYT LI+ L
Sbjct: 393 ALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRL 452

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           C+ G  +EA      M+    +P    ++ ++    EK    KA  +  EM++ GL
Sbjct: 453 CKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 169/357 (47%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           +  E  G +  L + + LI+         L + ++ ++L+   +PN  T+ TLI  LC  
Sbjct: 81  KQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFR 140

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+++  +   D++  +      +   +LI  + +    +    LL+++   ++  D + Y
Sbjct: 141 GEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMY 200

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + I+ +  K + L  A  VY EM+ +G S +   YTT I  +C  G ++EA  L+ EM+ 
Sbjct: 201 NTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKL 260

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   TFN+LI+  +K  +++E+      MM   + P    +N +I         K 
Sbjct: 261 KNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKH 320

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +      +G +P+   Y+++I G  K   + E + L+ EM++K++ P +  Y SLI 
Sbjct: 321 AKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLID 380

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            LC+   LE A    K MK   + P V  Y  L+    + G    A  + + ++++G
Sbjct: 381 GLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKG 437



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 168/368 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +AF V   + +RGF  + I+ NTLI  +            +  ++      ++ +  TLI
Sbjct: 110 LAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLI 169

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK G+ +    +L ++ G    P V++  ++I  + + + + +   +   M+ K + 
Sbjct: 170 NGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS 229

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ +++    M +L+ A  +  EM  +  + N   +   I A  + GK++EA  L
Sbjct: 230 PDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKIL 289

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M  A +KP   T+N LI+G      ++ +      M  R + P    +  MI  LC+
Sbjct: 290 LAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCK 349

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  +      K   P+ +TY+ LI G  K   ++  + L   M+ + I P + +
Sbjct: 350 TKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYS 409

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT L+  LC+ G+LE+A + F+ + +      V  Y  L+    + G   +AL L  +M 
Sbjct: 410 YTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKME 469

Query: 366 SEGLKPST 373
            +G  P  
Sbjct: 470 DKGCMPDA 477



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 153/324 (47%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R LE       ++ +NT+I+ + K+        +Y  M+     P+  T  TLI   C  
Sbjct: 186 RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIM 245

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L+    +L+ +  K  +P V     LI  + +E +++E  +LL  M++  +  D   Y
Sbjct: 246 GHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTY 305

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++     +  ++ A  V+  M +RG + +   YT  I   C+   ++EA  L +EM++
Sbjct: 306 NSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKH 365

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   T+N LI+G  K   +E +++ C++M  + + P   ++  ++  LC+ G  + 
Sbjct: 366 KNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    L KG+  N   Y+ LI    K G   E L L  +ME K   P    +  +I 
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIR 485

Query: 312 SLCQCGKLEEADKYFKIMKSHSLV 335
           +L +  + ++A+K  + M +  L+
Sbjct: 486 ALFEKDENDKAEKILREMIARGLL 509



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/348 (21%), Positives = 157/348 (45%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN ++  +  +     V  +++    N   P+  T+  LI+  C    +     +   I 
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +   P  I   +LI  +     I++ +    +++ +    D ++Y  ++    K    +
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +   +  ++       +  +Y T I + C+   + +A  +  EM   G+ P   T+  LI
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G      ++E+ S   +M  + + P+   FN +I  L + G  K+A  +L + +     
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK 299

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+  TY+ LI GY    E++    ++Y M  + ++P +  YT++I+ LC+   ++EA   
Sbjct: 300 PDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSL 359

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           F+ MK  +++P +  Y SL+    +  +  +A+ LC+ M  +G++P  
Sbjct: 360 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDV 407



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 107/246 (43%)

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           T  ++ I+ + V  ++  + + ++++    G + +    +  I  +C    I  A  +  
Sbjct: 57  TFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 116

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            +   G  P   T N LI+G      I+++L + +Q++++       ++  +I  LC+ G
Sbjct: 117 NILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTG 176

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             K    +L         P+ + Y+ +I    K   + +   +Y EM  K ISP +  YT
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 236

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +LI   C  G L+EA      MK  ++ P V  +  L+    ++G   +A  L   M+  
Sbjct: 237 TLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA 296

Query: 368 GLKPST 373
            +KP  
Sbjct: 297 CIKPDV 302



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 59/122 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +C+ ++++G    + S+  L+  + KS R +    I+Q +L    + N      
Sbjct: 388 LERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTV 447

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+ LCK G     +D+  ++  K C P  +    +I  + +++  ++   +L+ M+ + 
Sbjct: 448 LINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507

Query: 124 MI 125
           ++
Sbjct: 508 LL 509



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 72/158 (45%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++ + A  +   ++ +     ++++N+LI  + K+   +    + + M E    P+  + 
Sbjct: 351 KMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSY 410

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  LCK G+L+   ++  R+  K     V   T LI R+ +    +E + L  +M  
Sbjct: 411 TILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMED 470

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           K  + D + + +I+ A  +    + A  +  EM+ RG 
Sbjct: 471 KGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 152/319 (47%), Gaps = 2/319 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   L  A C+ G +     +++R+  +  +P VI   +++  + +  R+   +  
Sbjct: 238 PNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDF 297

Query: 116 L--KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
              KR        + + YS +V A +   N+  A+ ++ EM  +G+  ++ +Y T I   
Sbjct: 298 FREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGL 357

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
            + G++ +A  +   M+ AG K   + +N+LI G  + KR+ E+    E+M    L P  
Sbjct: 358 TQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDV 417

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             +N ++  LC+ G+    + +L   +D G  P+ +T+  L+ GY K G+  E LK++  
Sbjct: 418 YTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRS 477

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    I P    Y +LI  LC+  +++ A K F  M+ +++   V  Y +L+    +K  
Sbjct: 478 MGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNM 537

Query: 354 KAKALHLCEEMVSEGLKPS 372
             KA  L ++M  E   P 
Sbjct: 538 PEKAFELMDQMKEERCTPD 556



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 161/358 (44%), Gaps = 12/358 (3%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN+L+  + ++     +  ++  M E    P+  T   L++ LCK G +   + +LDR+
Sbjct: 133 TFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRM 192

Query: 85  HGKR---CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH----DTIAYSLIVYA 137
                  C+ +VI+NT ++  + +  R+++ +V +   +R+  +H    +T+ Y+ +  A
Sbjct: 193 SSPGSDVCADIVILNT-VVDGLCKIGRLQDAIVFVDERMRQ--VHGCAPNTVTYNCLADA 249

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             ++ +++ A  + E M K G + N     T +G  C  G++  A    +E     L+  
Sbjct: 250 CCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEAR 309

Query: 198 DE--TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               T++ L+        +  ++    +M  +   P    +  MI  L + G    A  +
Sbjct: 310 GNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNI 369

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  GF  +   Y+ LIGG+ ++  + E  +L+ EM+   + P +  Y +L+S LC+
Sbjct: 370 AASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCK 429

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G     D+    M      P V  + +LV  + + G   +AL +   M    ++P+T
Sbjct: 430 AGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNT 487



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/319 (19%), Positives = 134/319 (42%), Gaps = 2/319 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI--RYPNEATI 61
            ++A  +   +E+ G + ++I+ NT++  + +  R       ++           N  T 
Sbjct: 256 IDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTY 315

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL+SA      +   +++   +  +   P  ++  ++I  + Q  R+ +   +   M +
Sbjct: 316 STLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKK 375

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                D  AY++++    + + L  A  ++EEM   G   + + Y T +   C+ G    
Sbjct: 376 AGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSA 435

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
            + L+  M + G +P   TF  L+ G  KA + +E+L     M   ++ P+   +N +I 
Sbjct: 436 VDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLID 495

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+      A  +     +     N  TY+ L+ G   +   ++  +L  +M+ +  +P
Sbjct: 496 FLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTP 555

Query: 302 TLPAYTSLISSLCQCGKLE 320
                  L+  L + G+ E
Sbjct: 556 DYVTMDVLMEWLPEIGETE 574



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 96/217 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +++ GF L   ++N LI    +  R     ++++ M      P+  T  TL+S
Sbjct: 366 ACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLS 425

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G      ++L  +    C P V+   +L+    +  + +E + + + M    +  
Sbjct: 426 CLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQP 485

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T+ Y+ ++    K R ++ A+ +++EM +    AN   Y   +    +    E+A  LM
Sbjct: 486 NTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELM 545

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
            +M+     P   T ++L+E   +    E    + EQ
Sbjct: 546 DQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQ 582



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/281 (18%), Positives = 123/281 (43%), Gaps = 4/281 (1%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           +LE RG   + ++++TL+      +   L   ++  M +    P+     T+IS L + G
Sbjct: 305 WLEARG---NAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAG 361

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L    ++   +              LI    +++R+ E   L + M    +  D   Y+
Sbjct: 362 RLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYN 421

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K  +  +   +   M+  G   +   + T +  YC+ GK +EA  + + M  A
Sbjct: 422 TLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEA 481

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            ++P    +N LI+   K++ ++ ++   ++M    +  + + +N +++ L +    ++A
Sbjct: 482 RIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKA 541

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             ++    ++  +P+ +T   L+    + GE  E LK + E
Sbjct: 542 FELMDQMKEERCTPDYVTMDVLMEWLPEIGET-ERLKCFME 581



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 4/146 (2%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P  S FN ++  L   GN +    + T   +    P+ +TY  L+    K G + + LK+
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 291 YYEMEYK--SISPTLPAYTSLISSLCQCGKLEEADKYF--KIMKSHSLVPGVDIYESLVG 346
              M      +   +    +++  LC+ G+L++A  +   ++ + H   P    Y  L  
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLAD 248

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
                G+   A  + E M  EG+ P+
Sbjct: 249 ACCRVGDIDMACQIVERMEKEGVTPN 274


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 165/350 (47%), Gaps = 4/350 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRTLISALCKGGQLQTYVD 79
            +++ NT++  + KS R        +  + ++    PN  T   LI A C+ G +    +
Sbjct: 208 DVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYE 267

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL--KRMLRKNMIHDTIAYSLIVYA 137
           +++++  +     ++   +++  + +  R    +     KR +      + + YS +V A
Sbjct: 268 LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGA 327

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            +   N+  A+ ++ E +  G S ++ +Y T I    + G++E+A  +   M+ AG K  
Sbjct: 328 LLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLD 387

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            + +N+LI G  + KR+ E+    ++M    + P    +N ++   C+ G+    + +L 
Sbjct: 388 TKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLG 447

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +D G  P+ IT+  L+ GY K G+I E L++   M+   I P    Y +LI  LC+ G
Sbjct: 448 KMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRG 507

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            ++ A + F  MK  S+   V  + +L+    +K    KA  L ++M  E
Sbjct: 508 DVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREE 557



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 157/361 (43%), Gaps = 13/361 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM--LENIRYPNEATIRTLISALCKGGQLQTYVD 79
            + +FN+++  + +      + RIY  M    ++R P+  T   L++ LCK G++   + 
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVR-PDVVTYGILVNGLCKAGRVGDALR 193

Query: 80  MLDRIHGKRCS--PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH----DTIAYSL 133
           +LD +  +     P V+   +++  + +  R++E +  +++  R + +H    +T+ Y+ 
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQ--RMSSVHGCPPNTVTYNC 251

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  ++ N+  A  + E+M   G   N     T +G  C  G+   A    +E     
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311

Query: 194 L--KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
              K    T++ L+        +  ++    + MS    P    +  MI  L + G  + 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  M +   + GF  +   Y+ LI G+ ++  + E  +L  EM+   I P +  Y +L+S
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+ G     D+    M      P V  + +LV  + + G   +AL +   M   G+ P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 372 S 372
           +
Sbjct: 492 N 492



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/326 (19%), Positives = 140/326 (42%), Gaps = 6/326 (1%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP----NEATI 61
           +A+++   +E  G   ++++ NT++  + ++ R       ++   +   +P    N  T 
Sbjct: 264 MAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEGKGNAVTY 321

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL+ AL     +   +++      +  SP  I+  ++I  + Q  R+E+   +   M  
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                DT AY++++    + + L  A  + +EM + G   +   Y T +   C+ G    
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
            + L+ +M + G +P   TF  L+ G  K  +I+E+L     M    + P+   +N +I 
Sbjct: 442 VDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLID 501

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G+   A  +     +K    N  T++ L+ G   +   ++  +L  +M  +   P
Sbjct: 502 FLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFP 561

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFK 327
                  L+  L   G+ +   ++ +
Sbjct: 562 DYVTVDVLMEWLPVIGETDRLKRFMQ 587



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/275 (17%), Positives = 122/275 (44%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++++TL+  +  ++   +   ++   +     P+     T+IS L + G+L+    M   
Sbjct: 319 VTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASS 378

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +              LI    +++R+ E   LL+ M    +  D   Y+ ++    K  +
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             +   +  +M+  G   +   + T +  YC+ GKI+EA  +++ M+ +G+ P +  +N 
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+   K   ++ ++   ++M  + +  + + FN +++ L +    ++A  ++    ++ 
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
             P+ +T   L+      GE   + +   + E+ +
Sbjct: 559 CFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTA 593



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 86/229 (37%), Gaps = 35/229 (15%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +   +++ GF L   ++N LI    +  R    + + Q M E    P+  T  T
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+S  CK G      ++L ++    C P VI                             
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVIT---------------------------- 460

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                  +  +V+   K+  ++ AL +   M + G   N+ +Y T I   C+ G ++ A 
Sbjct: 461 -------FGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            L  EM+   +     TFN L++G       E++    +QM   +  P 
Sbjct: 514 ELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPD 562


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 159/339 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF L++  FN L++   K        +++  + +    P   +  TLI+  CK G L   
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +  ++   R  P V   ++LI  + +E +++    L   M ++ +I + + ++ +++ 
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +   ++     Y++ML +G   +  +Y T +  +C+ G +  A  ++  M   GL+P 
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  +   +E +L   ++M    +      F+ ++  +C+ G    A   L 
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L  G  P+++TY+ ++  + K+G+ Q   KL  EM+     P++  Y  L++ LC+ G
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           +++ AD     M +  +VP    Y +L+  H    N +K
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 138/281 (49%)

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           V V   L+ +  +E  I +   +   + ++++    ++++ ++    K+ NL+    +  
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
           +M K     + F Y+  I A C+  K++ A+ L  EM   GL P D  F  LI G ++  
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
            I+      ++M+S+ L P    +N ++   C+ G+   A  ++   + +G  P++ITY+
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            LI G+ + G+++  L++  EM+   I      +++L+  +C+ G++ +A++  + M   
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + P    Y  ++    +KG+      L +EM S+G  PS 
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 38/303 (12%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG   + + F TLIH  +++   DL+   YQ ML     P+     TL++  CK G L 
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL- 396

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
                                       +    I +GM+      R+ +  D I Y+ ++
Sbjct: 397 ----------------------------VAARNIVDGMI------RRGLRPDKITYTTLI 422

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               +  ++E+AL + +EM + G   +   ++  +   C+ G++ +A   ++EM  AG+K
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P D T+ ++++   K    +      ++M S   +PS   +N ++  LC+ G  K A+ +
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   L+ G  P++ITY+ L+ G+ +        K Y +     I   L +Y S+++ L +
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEGHHRHANSS---KRYIQKPEIGIVADLASYKSIVNELDR 599

Query: 316 CGK 318
             K
Sbjct: 600 ASK 602



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           LD GF  N   ++ L+  + KEG I +  K++ E+  +S+ PT+ ++ +LI+  C+ G L
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH-LCEEMVSEGLKPS 372
           +E  +    M+     P V  Y +L+   L K NK    H L +EM   GL P+
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINA-LCKENKMDGAHGLFDEMCKRGLIPN 344


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 161/353 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+++ ++L++      R      +   M+E    P+  T  TLI  L    +    
Sbjct: 74  GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 133

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V ++DR+  + C P ++    ++  + +   I+    LL +M    +  D + ++ I+ +
Sbjct: 134 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 193

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R+++ AL +++EM  +G   N   Y++ I   C YG+  +A+ L+ +M    + P 
Sbjct: 194 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 253

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TFN LI+   K  +  E+    + M+ R + P    +N +I   C      +A  M  
Sbjct: 254 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + K   P+  TY+ LI G+ K   +++  +L+ EM ++ +      YT+LI  L   G
Sbjct: 314 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             + A K FK M S  + P +  Y  L+      G   KAL + + M    +K
Sbjct: 374 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 426



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 162/331 (48%), Gaps = 2/331 (0%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM--LDRIHGKRCSPMVIVNTSLILR 102
           ++  M+++   P+      L+SA+ K  +    + +  L ++      P ++  +SL+  
Sbjct: 29  LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNG 88

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
               +RI + + L+ +M+      DTI ++ +++          A+ + + M++RG   N
Sbjct: 89  YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 148

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y   +   C+ G I+ A  L+ +ME A ++     FN +I+   K + ++++L+  +
Sbjct: 149 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 208

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M ++ + P+   ++ +I  LC  G    A+ +L+  ++K  +PN +T++ LI  + KEG
Sbjct: 209 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           +  E  KL+ +M  +SI P +  Y SLI+  C   +L++A + F+ M S    P +D Y 
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 328

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +L+    +         L  EM   GL   T
Sbjct: 329 TLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 170/386 (44%), Gaps = 35/386 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG   +L+++  +++ + K    DL + +   M       +     T+I +LCK   + 
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  K   P V+  +SLI  +    R  +   LL  M+ K +  + + ++ ++
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A VK      A  ++++M+KR    + F Y + I  +C + ++++A  + + M +    
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  +T+N LI+G  K+KR+E+      +M  R L+     +  +I+ L   G+   A  +
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
               +  G  P+ +TYS L+ G    G++++ L+++  M+                    
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441

Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
                           K + P +  Y ++IS LC    L+EA    K MK    +P    
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 501

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVS 366
           Y +L+  HL  G+KA +  L  EM S
Sbjct: 502 YNTLIRAHLRDGDKAASAELIREMRS 527



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 165/353 (46%), Gaps = 2/353 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLV--WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S+  FN L+  + K  + DLV    +   M++    P+  T+ +L++  C G ++   V 
Sbjct: 41  SIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 100

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           ++D++      P  I  T+LI  +    +  E + L+ RM+++    + + Y ++V    
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 160

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K  +++ A  +  +M      A+  ++ T I + C+Y  +++A  L +EME  G++P   
Sbjct: 161 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 220

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T++ LI       R  ++      M+ +K+ P+   FN +I    + G   +A  +    
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           + +   P+  TY+ LI G+     + +  +++  M  K   P L  Y +LI   C+  ++
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           E+  + F+ M    LV     Y +L+      G+   A  + ++MVS+G+ P 
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 161/358 (44%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G+    I+F TLIH +   ++      +   M++    PN  T   +++ LCK G + 
Sbjct: 107 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 166

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              ++L+++   +    V++  ++I  + +   +++ + L K M  K +  + + YS ++
Sbjct: 167 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 226

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                      A  +  +M+++  + N   +   I A+ + GK  EA  L  +M    + 
Sbjct: 227 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 286

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G     R++++    E M+S+   P    +N +I+  C+    +    +
Sbjct: 287 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 346

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +G   + +TY+ LI G   +G+     K++ +M    + P +  Y+ L+  LC 
Sbjct: 347 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 406

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GKLE+A + F  M+   +   + IY +++    + G       L   +  +G+KP+ 
Sbjct: 407 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 464



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 2/335 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++ + +E +G   +++++++LI  +    R     ++   M+E    PN  T 
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI A  K G+      + D +  +   P +    SLI      +R+++   + + M+ 
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K+   D   Y+ ++    K + +E    ++ EM  RG   ++  YTT I      G  + 
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + ++M + G+ P   T+++L++G     ++E++L   + M   ++      +  MI 
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 437

Query: 242 RLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            +C+ G       +  +L+L KG  PN +TY+ +I G   +  +QE   L  +M+     
Sbjct: 438 GMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
           P    Y +LI +  + G    + +  + M+S   V
Sbjct: 497 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 531



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 100/217 (46%), Gaps = 3/217 (1%)

Query: 169 FIG-AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE--SLSYCEQMM 225
           F+G ++ +  K+++A  L   M  +   P    FN L+   AK K+ +   SL+   +MM
Sbjct: 12  FVGISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMM 71

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
                PS    + ++   C       A  ++   ++ G+ P+ IT++ LI G     +  
Sbjct: 72  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 131

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E + L   M  +   P L  Y  +++ LC+ G ++ A      M++  +   V I+ +++
Sbjct: 132 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 191

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
               +  +   AL+L +EM ++G++P+     S  +C
Sbjct: 192 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 228


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 147/314 (46%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T  T +  +C  G L    +++  +    C P V++ T+LI   +Q+ R  + + +LK M
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             + +  DT  Y+ ++    K + ++ A     EM++ GF  ++F Y  FI  Y E G+ 
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
             A+  ++EM   G+ P       LI    K  ++ E+ S    M+ + +L     +  +
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           +  L + G    A  +      KG +P+  +Y  LI G++K G +Q+   ++ EM    +
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +  +  Y  L+   C+ G++E+A +    M      P    Y +++  + + G+ A+A  
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 360 LCEEMVSEGLKPST 373
           L +EM  +GL P +
Sbjct: 722 LFDEMKLKGLVPDS 735



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 172/379 (45%), Gaps = 22/379 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           SL   N L+  + K +R DL W +Y+ M+E     +  +   LI A C+ G +Q   D+L
Sbjct: 188 SLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVL 247

Query: 82  DRIHGKRCSPMVIVNTSLILR---------------------IIQEERIEEGMVLLKRML 120
            +   +  +  + V+ +L L+                     + +++R+E+   LL  M 
Sbjct: 248 LKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMN 307

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  D +AYS+++   +K RN ++A  +  EM+  GFS +  +Y  FI    + G +E
Sbjct: 308 SVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAME 367

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L   M   G+ P    +  LIEG  + K + +      ++  R ++ S   +   +
Sbjct: 368 KAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAV 427

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           + +C  G+   A  ++      G  PN + Y+ LI  + ++    + +++  EM  + I+
Sbjct: 428 KGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIA 487

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y SLI  L +  K++EA  +   M  +   P    Y + +  ++E G  A A   
Sbjct: 488 PDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKY 547

Query: 361 CEEMVSEGLKPSTSYLCSA 379
            +EM+  G+ P+   LC+ 
Sbjct: 548 VKEMLECGVIPN-KVLCTG 565



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 164/343 (47%), Gaps = 6/343 (1%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           ++ M+E     +  T   L++ L K G++    ++   + GK  +P V    +LI    +
Sbjct: 583 FRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSK 642

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
              +++   +   M++  +  + I Y++++    +   +E A  + +EM  +GF  N+  
Sbjct: 643 LGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVT 702

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y T I  YC+ G + EA  L  EM+  GL P    +  L++GC +   +E +++  E   
Sbjct: 703 YCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN- 761

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS----PNEITYSHLIGGYAKE 281
            +    S + FN +I  + + G  +    M+   +D  F     PN++TY+ +I    KE
Sbjct: 762 EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKE 821

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G ++   +L++ M+  ++ PT+  YTSL++   + G+  E    F  + +  + P   +Y
Sbjct: 822 GNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMY 881

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
             ++   L++G   KAL L ++M ++        L S STCR 
Sbjct: 882 SVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKL-SISTCRA 923



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 156/346 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++++ LI  + K    D    +   M+ +    +       I  + K G ++    + D 
Sbjct: 316 VAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDG 375

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +     +P      SLI    +E+ + +G  LL  + ++N++     Y   V       +
Sbjct: 376 MITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGD 435

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A  + +EM   G   N  +YTT I  + +  +  +A  +++EM   G+ P    +N 
Sbjct: 436 LDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNS 495

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G +KAK+++E+ S+  +M+     P    +   I    E G    A+  +   L+ G
Sbjct: 496 LIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG 555

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN++  + LI  Y K+G++ E    +  M  + I      YT L++ L + GK+ +A+
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAE 615

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + F  M+   + P V  Y +L+    + GN  KA  + +EMV  GL
Sbjct: 616 EIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/408 (20%), Positives = 175/408 (42%), Gaps = 38/408 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  V + + ++G +     +N+LI  ++K+ + D        M+EN   P+  T   
Sbjct: 471 FGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGA 530

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            IS   + G+  +    +  +      P  ++ T LI    ++ ++ E     + M+ + 
Sbjct: 531 FISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQG 590

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D   Y++++   VK   +  A  ++ EM  +G + + F Y T I  + + G +++A+
Sbjct: 591 ILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKAS 650

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  EM  AGL      +N+L+ G  ++  IE++    ++M  +   P+   +  +I   
Sbjct: 651 SIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGY 710

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+  +A  +      KG  P+   Y+ L+ G  +  +++  + ++   E    S + 
Sbjct: 711 CKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSA 770

Query: 304 P--------------------------------------AYTSLISSLCQCGKLEEADKY 325
           P                                       Y  +I  LC+ G LE A + 
Sbjct: 771 PFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKEL 830

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           F  M+  +L+P V  Y SL+  + + G +++   + +E+++ G++P  
Sbjct: 831 FHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDN 878



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 148/349 (42%), Gaps = 35/349 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++R   +S  ++ T +  +  S   D  + I + M  +   PN     TLI    +  +
Sbjct: 411 IKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSR 470

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               V +L  +  +  +P      SLI+ + + ++++E    L  M+      D   Y  
Sbjct: 471 FGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGA 530

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA----------- 182
            +   ++     SA    +EML+ G   N  + T  I  YC+ GK+ EA           
Sbjct: 531 FISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQG 590

Query: 183 ------------NCLMQ------------EMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
                       N L++            EM   G+ P   ++  LI+G +K   ++++ 
Sbjct: 591 ILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKAS 650

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S  ++M+   L  +   +N ++   C  G  ++A  +L     KGF PN +TY  +I GY
Sbjct: 651 SIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGY 710

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            K G++ E  +L+ EM+ K + P    YT+L+   C+   +E A   F+
Sbjct: 711 CKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/345 (21%), Positives = 138/345 (40%), Gaps = 45/345 (13%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G +  + S+ TLI   +K         I+  M++     N      L+   C+ G+
Sbjct: 621 MRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGE 680

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++LD + GK   P  +   ++I    +   + E   L   M  K ++ D+  Y+ 
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    ++ ++E A+ ++E   ++G +++S  +   I    ++GK E    ++  + +  
Sbjct: 741 LVDGCCRLNDVERAITIFETN-EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGS 799

Query: 194 L----KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC---------------- 233
                KP D T+N++I+   K   +E +      M    L+P+                 
Sbjct: 800 FDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRR 859

Query: 234 ----SAFNEMIRRLCECGN--------AKQANGMLTLAL---DKGFSPNEI--------- 269
               S F+E+I    E  N        A    GM T AL   D+ F+ N +         
Sbjct: 860 SEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSIS 919

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           T   L+ G+AK GE++   K+   M      P       LI+  C
Sbjct: 920 TCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 34/241 (14%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRN----DLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++G + S   FN LI+ V K  +     D++ R+     +    PN+ T   +I  LCK 
Sbjct: 762 EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKE 821

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L+   ++   +      P VI  TSL+    +  R  E   +   ++   +  D I Y
Sbjct: 822 GNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMY 881

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+I+ A +K      ALV+ ++M    F+ N+                           +
Sbjct: 882 SVIINAFLKEGMTTKALVLLDQM----FAKNAV--------------------------D 911

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G K    T   L+ G AK   +E +    E M+  K +P  S   E+I   C   N + 
Sbjct: 912 DGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRM 971

Query: 252 A 252
           A
Sbjct: 972 A 972


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 173/366 (47%), Gaps = 7/366 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +  +   + + + G   +LI+F  LI   +K    D  +++Y+ M +++  PN  T   L
Sbjct: 93  DTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAAL 152

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+  CK G L+       ++      P   V TS+I    ++  I+  M     M +++ 
Sbjct: 153 INGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESF 212

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D +AY +++   V    L+  L V E+M++ G + +  V TT + A+ + G  + A  
Sbjct: 213 RLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYG 272

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY-CEQMMSRKLLPSCSAFNEMIRRL 243
           + +E+ N G +P   T + LI+G  K  R  ++  Y C++  +        ++  +I  +
Sbjct: 273 VYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEKANE------VSYTALIDGI 326

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ GN  +   ++    + GF P++  Y+  I    ++G+I E  K+  +M  + I   L
Sbjct: 327 CKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDL 386

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+SLI  L   G + EA + F  M    ++P   +++ L+  +L++ N     HL EE
Sbjct: 387 LTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEE 446

Query: 364 MVSEGL 369
           M   GL
Sbjct: 447 MRRRGL 452



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 151/349 (43%), Gaps = 6/349 (1%)

Query: 21  LSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           + L+SFN L +   K    + V+ IY  ++     PN  T  T I  LCK G L T    
Sbjct: 40  VDLVSFNALFNGFCKRKMKEEVF-IYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKF 98

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
              +      P +I  T LI    +   ++    L K M +   + +   Y+ ++    K
Sbjct: 99  FKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCK 158

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              LE A   + +ML+ G   NS VYT+ I  + + G I+ A     EM     +     
Sbjct: 159 RGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVA 218

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           + ++I G     R+++ L   E M+   L P       ++    + GN K A G+    L
Sbjct: 219 YGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELL 278

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           ++GF P+ +T S LI G  K+G   +    + + +   +S     YT+LI  +C+ G L+
Sbjct: 279 NRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEKANEVS-----YTALIDGICKEGNLD 333

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           E ++    M     VP   +Y S +     +G   +A  +  +MV EG+
Sbjct: 334 EVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGI 382



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 131/288 (45%), Gaps = 1/288 (0%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P ++   SLI    +  ++EE  + +KR+       D ++++ +     K R ++  + +
Sbjct: 5   PDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCK-RKMKEEVFI 63

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           Y  ++ +    N   Y T+I   C+ G ++      +EM   G+ P    F  LI+G +K
Sbjct: 64  YMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSK 123

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              ++ +    + M     LP+   +  +I   C+ G  ++A       L+ G  PN   
Sbjct: 124 IGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTV 183

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ +I G+ K+G I   +K + EM  +S    + AY  +IS L   G+L++  +  + M 
Sbjct: 184 YTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMV 243

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            + L P   +  +L+  H + GN   A  +  E+++ G +P    + S
Sbjct: 244 RNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISS 291



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 34/212 (16%)

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESL-----------------------SYCEQMMSRKL 229
           G  P   T+N LI+G  K  ++EE+                         +C++ M  ++
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEV 61

Query: 230 -----------LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                      LP+   +   I  LC+ G+              G  PN I ++ LI GY
Sbjct: 62  FIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGY 121

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           +K G +    +LY +M      P +  Y +LI+  C+ G LE A+ +F  M    ++P  
Sbjct: 122 SKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNS 181

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            +Y S++  H +KGN   A+    EM  E  +
Sbjct: 182 TVYTSIIDGHFKKGNIDVAMKYFSEMRKESFR 213



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 5/195 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A+ V R L  RGF    ++ ++LI  + K  R       +          NE +   L
Sbjct: 268 KAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCK-----EKANEVSYTAL 322

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  +CK G L     ++  +      P   V TS I  + ++ +I E   +  +M+ + +
Sbjct: 323 IDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGI 382

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + YS +++       +  A  ++++MLKRG   +S V+   I  Y +       + 
Sbjct: 383 DLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISH 442

Query: 185 LMQEMENAGLKPYDE 199
           L +EM   GL   D+
Sbjct: 443 LHEEMRRRGLLTIDK 457


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 155/360 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +EQ G   +++++NT++    K  R D    +   M E   YPN+ T   L++ L K G+
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+    +++ +     +        LI    Q+    E   L++ M+ +        Y+ 
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++Y   K   +    + + +MLK  F+ +   + + +  YC  G I EA  L  E++   
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+N LI G      ++ +L   ++M  + L P    +  ++    + G    A 
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           G     L KG  P+   Y+  I G  K  +      +  EM      P +  Y   + +L
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           CQ G  EEA    + M S  L+P    Y S++   ++ G+  KA  +  EM+S+G+ PS 
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 169/371 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LF  AFD+   +  R    +L ++NTL++ + K  +   V   +  ML++   P+  +  
Sbjct: 300 LFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFN 359

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +L+   C+ G +     + D +  +   P VI   +LI  +     ++  + L K M  +
Sbjct: 360 SLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ 419

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y+++V    K+  +  A   + EML +G   + F Y T I    +      A
Sbjct: 420 GLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVA 479

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             + +EM  AG  P   T+N+ +    +    EE+    E M+S  L+P    +  +I  
Sbjct: 480 FSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIING 539

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
             + G+ ++A  +    L KG +P+ +TY+ LI  +A +  +      + +M  KS+   
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPAN 599

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y ++I+ LC   +++EA KYF  M+   ++P    Y  L+      G   +AL L  
Sbjct: 600 VITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYR 659

Query: 363 EMVSEGLKPST 373
           EM+   ++P +
Sbjct: 660 EMLDRKIQPDS 670



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 6/310 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   L+ R    ++I++NTLIH +      D   R+ + M +   +P+  T   L++
Sbjct: 374 AFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVN 433

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV---LLKRMLRKN 123
              K G +       + +  K   P      +   RI+ E +I +  V   + + ML   
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT---RIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++ V+A  +  N E A  + E M+  G   +   YT+ I  + + G + +A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  EM + G+ P   T+ +LI   A  + ++ +  Y  +M+ + +  +   +N +I  L
Sbjct: 551 EVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGL 610

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A        +KG  PN+ +Y+ LI      G  +E L+LY EM  + I P  
Sbjct: 611 CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670

Query: 304 PAYTSLISSL 313
             ++  + +L
Sbjct: 671 FTHSVFLKNL 680



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%)

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++M+   LLP     N ++R L +     +A  +  +    G  P  +TY+ ++  Y KE
Sbjct: 169 DKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKE 228

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + + L+L  EM+ +   P    Y  L++ L + G+LE+A    + M +  L      Y
Sbjct: 229 GRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTY 288

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             L+    +KG   +A  L EEMV+    P+ S
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 10/255 (3%)

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           VI +  L +R++   RI   + L  R  R  M       S  V+  +        ++V  
Sbjct: 81  VITDPHLFIRVLHSMRIRPRVAL--RFFRWVMAQPDFKESEFVFCAIL------DILVGN 132

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM--QEMENAGLKPYDETFNLLIEGCAK 210
           +++   +     V +  +    +        CL+   +M   GL P  +  N ++     
Sbjct: 133 DLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRD 192

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              + ++ +    M    + P+   +N M+   C+ G   QA  +L+   ++G  PN++T
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT 252

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ L+ G +K+GE+++   L  EM    ++ +   Y  LI+  CQ G   EA    + M 
Sbjct: 253 YNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV 312

Query: 331 SHSLVPGVDIYESLV 345
           +    P +  Y +L+
Sbjct: 313 NRRAFPTLSTYNTLM 327



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/236 (19%), Positives = 95/236 (40%), Gaps = 40/236 (16%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VAF +   +   GF   +I++N  +H + +    +    + ++M+ +   P+  T  ++I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI------------------------- 100
           +   K G L+   ++ + +  K  +P V+  T LI                         
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597

Query: 101 LRIIQEERIEEGMVLLKRMLR----------KNMIHDTIAYSLIVYAKVKMRNLESALVV 150
             +I    I  G+ + +RM            K ++ +  +Y++++     M   E AL +
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRL 657

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           Y EML R    +SF ++ F+       ++    C+   ++N      ++  N+ IE
Sbjct: 658 YREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNV-----EDNINVRIE 708


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 167/370 (45%), Gaps = 35/370 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E AF++   +  +GFS  + ++NT+I+ + K  + +    ++  ML +   P+  T R
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +L+   CK G                              +++ E++         M  +
Sbjct: 345 SLLMEACKKGD-----------------------------VVETEKV------FSDMRSR 369

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           +++ D + +S ++    +  NL+ AL+ +  + + G   ++ +YT  I  YC  G I  A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  EM   G      T+N ++ G  K K + E+     +M  R L P       +I  
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C+ GN + A  +     +K    + +TY+ L+ G+ K G+I    +++ +M  K I PT
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             +Y+ L+++LC  G L EA + +  M S ++ P V I  S++  +   GN +      E
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609

Query: 363 EMVSEGLKPS 372
           +M+SEG  P 
Sbjct: 610 KMISEGFVPD 619



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 37/352 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  +GF++S+ + N LI  + +    +L W +YQ +  +    N  T+  +++ALCK G+
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++     L ++  K   P                                   D + Y+ 
Sbjct: 251 MEKVGTFLSQVQEKGVYP-----------------------------------DIVTYNT 275

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A      +E A  +   M  +GFS   + Y T I   C++GK E A  +  EM  +G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335

Query: 194 LKPYDETF-NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           L P   T+ +LL+E C K   +E    + + M SR ++P    F+ M+      GN  +A
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSD-MRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
                   + G  P+ + Y+ LI GY ++G I   + L  EM  +  +  +  Y +++  
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           LC+   L EADK F  M   +L P       L+  H + GN   A+ L ++M
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/364 (19%), Positives = 169/364 (46%), Gaps = 2/364 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  R     L+ F++++ + T+S   D     +  + E    P+      LI   C+ G 
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   +++ + +  + C+  V+   +++  + + + + E   L   M  + +  D+   ++
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+ NL++A+ ++++M ++    +   Y T +  + + G I+ A  +  +M +  
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++++L+        + E+    ++M+S+ + P+    N MI+  C  GNA    
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK--SISPTLPAYTSLIS 311
             L   + +GF P+ I+Y+ LI G+ +E  + +   L  +ME +   + P +  Y S++ 
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+  +++EA+   + M    + P    Y  ++   + + N  +A  + +EM+  G  P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725

Query: 372 STSY 375
              +
Sbjct: 726 DDKF 729



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 160/362 (44%), Gaps = 23/362 (6%)

Query: 12  RYLEQRGFSL-----SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           R+++Q GF       + +S + +IH++ +S R          M+          + +L S
Sbjct: 97  RFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDS 156

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G   +  D+L R +                  +Q  ++ E       +  K    
Sbjct: 157 TFSNCGSNDSVFDLLIRTY------------------VQARKLREAHEAFTLLRSKGFTV 198

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              A + ++ + V++  +E A  VY+E+ + G   N +     + A C+ GK+E+    +
Sbjct: 199 SIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL 258

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +++  G+ P   T+N LI   +    +EE+      M  +   P    +N +I  LC+ 
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  ++A  +    L  G SP+  TY  L+    K+G++ E  K++ +M  + + P L  +
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +S++S   + G L++A  YF  +K   L+P   IY  L+  +  KG  + A++L  EM+ 
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438

Query: 367 EG 368
           +G
Sbjct: 439 QG 440



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 145/301 (48%), Gaps = 2/301 (0%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +  VA ++   + Q+G ++ ++++NT++H + K        +++  M E   +P+  T+ 
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   CK G LQ  +++  ++  KR    V+   +L+    +   I+    +   M+ K
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++   I+YS++V A     +L  A  V++EM+ +       +  + I  YC  G   + 
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK--LLPSCSAFNEMI 240
              +++M + G  P   ++N LI G  + + + ++    ++M   +  L+P    +N ++
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C     K+A  +L   +++G +P+  TY+ +I G+  +  + E  +++ EM  +  S
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724

Query: 301 P 301
           P
Sbjct: 725 P 725



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 18/316 (5%)

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---------NMI 125
           Q +VD L   H        +  +++I  +++  R+ +    L RM+R+         N +
Sbjct: 96  QRFVDQLG-FHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSL 154

Query: 126 HDTIA--------YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
             T +        + L++   V+ R L  A   +  +  +GF+ +       IG+    G
Sbjct: 155 DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG 214

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            +E A  + QE+  +G+     T N+++    K  ++E+  ++  Q+  + + P    +N
Sbjct: 215 WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I      G  ++A  ++     KGFSP   TY+ +I G  K G+ +   +++ EM   
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            +SP    Y SL+   C+ G + E +K F  M+S  +VP +  + S++ +    GN  KA
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394

Query: 358 LHLCEEMVSEGLKPST 373
           L     +   GL P  
Sbjct: 395 LMYFNSVKEAGLIPDN 410



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 21/255 (8%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEE 181
           N  H +++ S +++  V+   L  A      M++R G S                 ++E 
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVS-----------------RLEI 150

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
            N L     N G    D  F+LLI    +A+++ E+      + S+    S  A N +I 
Sbjct: 151 VNSLDSTFSNCG--SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L   G  + A G+       G   N  T + ++    K+G++++V     +++ K + P
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LIS+    G +EEA +    M      PGV  Y +++    + G   +A  + 
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328

Query: 362 EEMVSEGLKP-STSY 375
            EM+  GL P ST+Y
Sbjct: 329 AEMLRSGLSPDSTTY 343


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 159/370 (42%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 97  FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEEILE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 141 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   ML  G   + + Y+  I   C+  K+++A
Sbjct: 173 -------SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 226 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA+ ++     KG  P++ITY+ LI G  KEG++    +    M  ++I   
Sbjct: 286 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+L S LCQ G+  +A+K  + M S  L P    Y  ++    +KG+  K   L +
Sbjct: 346 EVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 405

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 406 EMQRDGHVPS 415



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 133/303 (43%), Gaps = 38/303 (12%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ +  FD    + + G   S++S+NTL++   +    D  +R+   ML +   P+  T
Sbjct: 152 IRVAQSVFDA---ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I          
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI---------- 318

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
                                    +GC K   ++ +  + ++M+   +     A+  + 
Sbjct: 319 -------------------------DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALX 353

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 413

Query: 301 PTL 303
           P++
Sbjct: 414 PSV 416



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  + +   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 78  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 137 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 149/295 (50%)

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +LD +  K C+P +I    ++  I QE R+++ M  L+ +       +T++Y++++    
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
                E A  + EEM  +G   N   +   I   C  G +E A  +++++   G  P   
Sbjct: 63  TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           ++N L+    K K++++++++ E M+SR   P   ++N ++  LC  G    A  +L   
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
             KG SP  I+Y+ +I G  K G+ +E L+L  EM  K + P +  YT++ S LC+  K+
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           EEA + F  ++   + P V +Y +++    ++     A+ L   M+S G  P+ S
Sbjct: 243 EEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNES 297



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/322 (20%), Positives = 147/322 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G +  +I++N +++ + +  R D      +++      PN  +   ++  L    +
Sbjct: 7   MRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAER 66

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +    +++ +  K C P V+    LI  + +   +E  M +L+++ +     ++++Y+ 
Sbjct: 67  WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNP 126

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++A  K + ++ A+   E M+ RG   +   Y T + A C  G+++ A  L+ +++  G
Sbjct: 127 LLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKG 186

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   ++N +I+G  KA + +E+L   ++M+S+ L P    +  +   LC     ++A 
Sbjct: 187 CSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAI 246

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                  D G  P  + Y+ ++ G  K  E    + L+  M      P    YT L+  L
Sbjct: 247 RTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGL 306

Query: 314 CQCGKLEEADKYFKIMKSHSLV 335
              G ++EA      + S  +V
Sbjct: 307 AYEGLVKEARDLLGQLCSRGVV 328



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 141/288 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +    L   G   + +S+N ++  +  ++R +   ++ + M      PN  T   LIS
Sbjct: 35  AMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS 94

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+ G ++  +++L++I    C+P  +    L+    +++++++ M  ++ M+ +    
Sbjct: 95  FLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYP 154

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D ++Y+ ++ A  +   ++ A+ +  ++  +G S     Y T I    + GK +EA  L+
Sbjct: 155 DIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELL 214

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + GL+P   T+  +  G  +  +IEE++    ++    + P+   +N ++  LC+ 
Sbjct: 215 DEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKR 274

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
                A  + +  +  G  PNE TY+ L+ G A EG ++E   L  ++
Sbjct: 275 RETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQL 322



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 112/228 (49%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A +V   + + G + + +S+N L+H   K  + D      + M+    YP+  +  
Sbjct: 101 LVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYN 160

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALC+ G++   +D+L ++ GK CSP++I   ++I  + +  + +E + LL  M+ K
Sbjct: 161 TLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISK 220

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I Y+ I     +   +E A+  + ++   G      +Y   +   C+  +   A
Sbjct: 221 GLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNA 280

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             L   M + G  P + T+ +L+EG A    ++E+     Q+ SR ++
Sbjct: 281 IDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 162/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD C+ +              L H+V K    +LVW  Y+ +LE   YP       
Sbjct: 97  FWVPFDTCKKM--------------LEHLV-KLKYFNLVWAFYEEILE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 141 ILMHRFCKEGDIRLAQSVFDAITKWGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L     +   M   G   + + Y+  I   C+  K+++A
Sbjct: 173 -------SYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L +EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ LLP    +N +I  
Sbjct: 226 NELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G   QA+ ++     KG  P++ITY+ LI G  KEG++    +    M  ++I   
Sbjct: 286 LCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    +KG+  K   L +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 405

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 406 EMQRDGHAPS 415



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
            MIH    + +   AK      V  +   SA  V+  ++  K    ++ +V++  I AY 
Sbjct: 18  TMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K      ++ E+++      S 
Sbjct: 78  ESGFLRDAVECYRLTREHKFWVPFD-TCKKMLEHLVKLKYFNLVWAFYEEILECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  KL   
Sbjct: 137 YFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F+ M    LVP    + +L+  H + G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEVYKQMLSQSLLPD 275



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 125/270 (46%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++S+NTL++   +    +  +++   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ + +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            ++++ D I Y+ ++Y   K   L  A  + +EM  +G   +   YTT I   C+ G ++
Sbjct: 269 SQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLD 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+  + + +L      G +P+ +T
Sbjct: 389 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 164/357 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +++++ TLI+ + K  +    + I+  M+     PN  T  +LI  LCK  + +  
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +++ +   +  P V    +++  + +E  + E   ++  M+ + +  + + Y+ ++  
Sbjct: 205 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 ++ A+ V++ M+ +   AN   Y T I  YC+   +++A  L +EM    L P 
Sbjct: 265 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 324

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N LI G     R+++++S   +M++R  +P    +  +   LC+  +  +A  +L 
Sbjct: 325 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 384

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                 + P+   Y+ ++ G  + GE+++   L+  +  K + P +  Y  +I  LC+ G
Sbjct: 385 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 444

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            L EA K F  M  +   P    Y  +    L      + + L EEM++ G     S
Sbjct: 445 LLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVS 501



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/361 (21%), Positives = 170/361 (47%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R ++  G    + +   +I+ +   +R D  +     +L+    P+  T  TLI  LC  
Sbjct: 69  RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVE 128

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++   + + D++ G+   P V+   +LI  + ++ ++ E   +   M+ K +  + + Y
Sbjct: 129 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTY 188

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +++   K+   +    +  EM+      + F   T + A C+ G + EA+ ++  M +
Sbjct: 189 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 248

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G++P   T+N L++G      ++ ++   + M+ +  + +  ++N +I   C+  +  +
Sbjct: 249 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +      +  +PN +TY+ LI G    G +Q+ + L++EM  +   P L  Y +L  
Sbjct: 309 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+   L++A    K ++  +  P + IY +++      G    A  L   + S+GL+P
Sbjct: 369 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 428

Query: 372 S 372
           +
Sbjct: 429 N 429



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 147/295 (49%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G S +++++N+LIH + K      V  +   M+++   P+  T+ T++ 
Sbjct: 169 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 228

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G +    D++D +  +   P V+   +L+        ++  + +   M+ K+ + 
Sbjct: 229 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 288

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I+Y+ ++    K+++++ A+ ++EEM ++  + N+  Y T I   C  G++++A  L 
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G  P   T+  L +   K + ++++++  + +      P    +  ++  +C  
Sbjct: 349 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 408

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
           G  + A  + +    KG  PN  TY+ +I G  K+G + E  KL+ EM     SP
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 463



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 154/351 (43%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S + FN L+  + K+  +  +  + + M      P+  T+  +I++LC   ++      L
Sbjct: 44  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 103

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P     T+LI  +  E +I E + L  +M+ +    + + Y  ++    K 
Sbjct: 104 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKD 163

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           R +  A  ++ EM+ +G S N   Y + I   C+  + +    LM EM ++ + P   T 
Sbjct: 164 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 223

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N +++   K   + E+    + M+ R + P+   +N ++   C       A  +    + 
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 283

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           K    N I+Y+ LI GY K   + + + L+ EM  + ++P    Y +LI  LC  G+L++
Sbjct: 284 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 343

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A   F  M +   +P +  Y +L     +  +  KA+ L + +      P 
Sbjct: 344 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPD 394



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 154/361 (42%), Gaps = 17/361 (4%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           + FNTL          D     +  ML     P+      L++++ K     T + +  +
Sbjct: 21  LHFNTL----------DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 70

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P V     +I  +    R++     L ++L+     D   ++ ++        
Sbjct: 71  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  AL ++++M+  GF  N   Y T I   C+  ++ EA  +  EM   G+ P   T+N 
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  K    +   +   +M+  K++P     N ++  LC+ G   +A+ ++ + + +G
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN +TY+ L+ G+    E+   +K++  M +K     + +Y +LI+  C+   +++A 
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 310

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-------TSYL 376
             F+ M    L P    Y +L+      G    A+ L  EMV+ G  P        + YL
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 370

Query: 377 C 377
           C
Sbjct: 371 C 371



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/334 (21%), Positives = 156/334 (46%), Gaps = 13/334 (3%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R    AF V   L + GF   ++++ TL++ + K             M+     P+  T
Sbjct: 629 LRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFT 675

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             +LI ALC   + +    +L+ +   +  P V+V ++++  + +E  I     ++  M+
Sbjct: 676 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 735

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++ +  D + Y+ ++        ++ A+ V++ M+ +G   N   Y   I  YC+  +++
Sbjct: 736 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 795

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L+++M   GL     T+N LI G     R++ +++   +M++   +P    +  ++
Sbjct: 796 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 855

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+  +  +A  +L          + + Y+  I G  + GE++    L+  +  K + 
Sbjct: 856 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 915

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           P +  Y  +I  LC+ G L+EA+K F+ M  + +
Sbjct: 916 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 147/345 (42%), Gaps = 13/345 (3%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +     +   ++  G    + + N LI+      R    + +   +L+    P+  T
Sbjct: 594 MKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVT 653

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++ LCK             +  K  SP +    SLI  +      +    LL  M+
Sbjct: 654 YGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 700

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              ++ + + +S +V A  K   +  A  V + M+KRG   +   YT  +  +C   +++
Sbjct: 701 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 760

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  +   M + G  P   ++N+LI G  + +R+++++   EQM  + L+     +N +I
Sbjct: 761 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 820

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G  + A  +    +  G  P+ +TY  L+    K   + E + L   +E  ++ 
Sbjct: 821 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLD 880

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +  Y   I  +C+ G+LE A   F  + S  L P V  Y  ++
Sbjct: 881 ADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 925



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 149/351 (42%), Gaps = 13/351 (3%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S + F  L+  + K      V  +   M      P+  T+  LI++ C   +L     +L
Sbjct: 580 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 639

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P V+   +L             M  L +M+ K +  D   Y+ +++A   +
Sbjct: 640 AKLLKLGFQPDVVTYGTL-------------MNGLCKMITKGISPDIFTYNSLIHALCNL 686

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              +    +  EM+      N  V++T + A C+ G I  A+ ++  M   G++P   T+
Sbjct: 687 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 746

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             L++G      ++E++   + M+ +  +P+  ++N +I   C+     +A G+L     
Sbjct: 747 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 806

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G   + +TY+ LI G    G +Q  + L++EM      P L  Y  L+  LC+   L E
Sbjct: 807 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 866

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A    K ++  +L   + +Y   +      G    A  L   + S+GL+P 
Sbjct: 867 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/414 (21%), Positives = 164/414 (39%), Gaps = 59/414 (14%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA  V   +  +    ++IS+NTLI+   K    D    +++ M      PN  T  TL
Sbjct: 272 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 331

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G+LQ  + +   +  +   P ++   +L   + +   +++ M LLK +   N 
Sbjct: 332 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 391

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+ I+    +   LE A  ++  +  +G   N + Y   I   C+ G + EA+ 
Sbjct: 392 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 451

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL------------LPS 232
           L  EM   G  P D T+NL+  G  +      ++   E+M++R              + S
Sbjct: 452 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 511

Query: 233 CSAFNEMIRR-LCECGNAKQANG--MLTL--------------------ALDKGFS---- 265
               ++ +++ LC+  ++ + +G  M +L                     LD   S    
Sbjct: 512 DDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNR 571

Query: 266 -------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
                  P+ + ++ L+   AK      VL L  +M+   I P +     LI+S C   +
Sbjct: 572 MLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRR 631

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L  A      +      P V  Y +L+              LC +M+++G+ P 
Sbjct: 632 LGYAFSVLAKLLKLGFQPDVVTYGTLMN------------GLC-KMITKGISPD 672



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 124/282 (43%), Gaps = 13/282 (4%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P  +  T L+  I + +     + L  +M    +  D    ++++ +   +R L  A  V
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             ++LK GF  +   Y T +   C             +M   G+ P   T+N LI     
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCN 685

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
               +   +   +M++ K++P+   F+ ++  LC+ G    A+ ++ + + +G  P+ +T
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ L+ G+    E+ E +K++  M +K   P + +Y  LI+  CQ  ++++A    + M 
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              L+     Y +L+      G    A+ L  EMV+ G  P 
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 847



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 127/281 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV   +  RG   +++++N L+      +  D+  +++  M+      N  +  TLI+
Sbjct: 239 AHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 298

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK   +   + + + +  +  +P  +   +LI  +    R+++ + L   M+ +  I 
Sbjct: 299 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 358

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y  +     K R+L+ A+ + + +    +  +  +YTT +   C  G++E+A  L 
Sbjct: 359 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 418

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             + + GL+P   T+N++I G  K   + E+     +M      P+   +N + R     
Sbjct: 419 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 478

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             A +   +L   L +GFS +  T + L+G  + +G  Q V
Sbjct: 479 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSV 519



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/440 (20%), Positives = 158/440 (35%), Gaps = 94/440 (21%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++  + + +++NTLIH +    R      ++  M+   + P+  T RTL   LCK   
Sbjct: 316 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 375

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   + +L  I G    P + + T+++  + +   +E+   L   +  K +  +   Y++
Sbjct: 376 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 435

Query: 134 IVYAKVK---------------------------------MRNLES--ALVVYEEMLKRG 158
           +++   K                                 +RN E+   + + EEML RG
Sbjct: 436 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 495

Query: 159 FSANSFVYTTFIGAYCEYG----------------------------------------- 177
           FS +    T  +G   + G                                         
Sbjct: 496 FSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSR 555

Query: 178 -----KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
                 +++A      M +    P    F  L+   AK K     LS   QM S  + P 
Sbjct: 556 SPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPD 615

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
               N +I   C       A  +L   L  GF P+ +TY  L+ G  K            
Sbjct: 616 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK------------ 663

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            M  K ISP +  Y SLI +LC   + +        M +  ++P V ++ ++V    ++G
Sbjct: 664 -MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722

Query: 353 NKAKALHLCEEMVSEGLKPS 372
             A A  + + M+  G++P 
Sbjct: 723 MIAIAHDVVDMMIKRGVEPD 742



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 13/265 (4%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ +    RML  +    T+ ++ ++ +  KM++  + L +  +M   G   + +    
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I ++C   ++  A  ++ ++   G +P   T+  L+ G  K             M+++ 
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKG 668

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           + P    +N +I  LC     K    +L   ++    PN + +S ++    KEG I    
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            +   M  + + P +  YT+L+   C   +++EA K F  M     VP V  Y  L+  +
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788

Query: 349 LEKGNKAKALHLCEEMVSEGLKPST 373
            +     KA+ L E+M  +GL   T
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADT 813



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 76/180 (42%)

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + TF      +  ++EA      M +    P    FN L+   AK K     LS   QM 
Sbjct: 13  HNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMD 72

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           S  + P       +I  LC       A   L   L  G  P+  T++ LI G   EG+I 
Sbjct: 73  SFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIG 132

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E L L+ +M  +   P +  Y +LI+ LC+  ++ EA   F  M +  + P +  Y SL+
Sbjct: 133 EALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 192


>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
           montevidense]
          Length = 376

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 161/329 (48%), Gaps = 1/329 (0%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           R+Y+ M E+   P+      +++   K G+++   D+ + + G+  S  V    +++  +
Sbjct: 11  RVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWE-LMGREGSRNVASFNTMMRGL 69

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
                ++E   + + M     + D+  Y ++V+   K      +L V E   + G + ++
Sbjct: 70  FNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDA 129

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           F Y+  I   C+ GK+++A  ++  M  +G KP  + +N LI G   A + E+++   ++
Sbjct: 130 FAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKE 189

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           + +R   P+   +N +I  LC+     +A  ++   L+KG++P+ ITYS LI G  ++ +
Sbjct: 190 LGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHK 249

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           ++  L+L+ ++  K   P +  +  LI  LC  GK E A + +  M   +  P +  Y +
Sbjct: 250 VEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNT 309

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+    + G+   AL +   ++  GL P 
Sbjct: 310 LMEGFYKGGDTRNALVIWARILRNGLLPD 338



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 154/331 (46%), Gaps = 1/331 (0%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           FD+   + + G S ++ SFNT++  +  +   D V+ I++ M E+    +  T   L+  
Sbjct: 45  FDLWELMGREG-SRNVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHG 103

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
            CK G     + +L+    +  +      +++I  + +  ++++ + +L  M+      +
Sbjct: 104 FCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPN 163

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
           T  Y+ ++   +     E A+ V++E+  R  S     Y T I   C+  +  EA  L++
Sbjct: 164 TQVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVK 223

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           EM   G  P   T++LLI+G  +  ++E +L    Q++S+   P     N +I  LC  G
Sbjct: 224 EMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVG 283

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             + A+ +         +PN +TY+ L+ G+ K G+ +  L ++  +    + P + +Y 
Sbjct: 284 KTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYN 343

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
             +  LC C ++  A  +     + ++VP V
Sbjct: 344 ITLKGLCACNRISVAILFLNDAVTKNIVPTV 374



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 116/256 (45%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           +Q G +L   +++ +I  + K  + D    +   M+E+   PN      LI+ L    + 
Sbjct: 121 KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKF 180

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +  + +   +  + CSP ++   +LI  + + ER  E   L+K ML K      I YSL+
Sbjct: 181 EDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLL 240

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    +   +E AL ++ +++ +GF  +  ++   I   C  GK E A+ L  +M +   
Sbjct: 241 IKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNC 300

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+N L+EG  K      +L    +++   LLP   ++N  ++ LC C     A  
Sbjct: 301 APNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAIL 360

Query: 255 MLTLALDKGFSPNEIT 270
            L  A+ K   P  IT
Sbjct: 361 FLNDAVTKNIVPTVIT 376



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 3/231 (1%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           + +A  VY+EM +   S ++ VY   +  + + G+I+    L + M   G +    +FN 
Sbjct: 6   INAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNV-ASFNT 64

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++ G      ++E  S  E M     +   + +  ++   C+ G   ++  +L +A  +G
Sbjct: 65  MMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEG 124

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            + +   YS +I G  K G++ + + +   M      P    Y +LI+ L    K E+A 
Sbjct: 125 GALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAI 184

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGLKPST 373
           + FK + +    P +  Y +L+   L KG + A+A  L +EM+ +G  PS 
Sbjct: 185 RVFKELGTRHCSPTIVTYNTLIN-GLCKGERFAEAYDLVKEMLEKGWNPSV 234



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 1/199 (0%)

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           CE G I  A  + +EM  + + P    +N ++ G  KA RI+      E +M R+   + 
Sbjct: 1   CESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWE-LMGREGSRNV 59

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           ++FN M+R L   G   +   +  L  + GF  +  TY  L+ G+ K G   + L +   
Sbjct: 60  ASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEI 119

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
            + +  +    AY+++IS LC+ GKL++A      M      P   +Y +L+   L    
Sbjct: 120 AKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASK 179

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + +E+ +    P+
Sbjct: 180 FEDAIRVFKELGTRHCSPT 198



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 86/193 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  V + L  R  S +++++NTLI+ + K +R    + + + MLE    P+  T   
Sbjct: 180 FEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSL 239

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC+  +++  + + +++  K   P V ++  LI  +    + E    L   M   N
Sbjct: 240 LIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWN 299

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y+ ++    K  +  +ALV++  +L+ G   +   Y   +   C   +I  A 
Sbjct: 300 CAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAI 359

Query: 184 CLMQEMENAGLKP 196
             + +     + P
Sbjct: 360 LFLNDAVTKNIVP 372


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 159/322 (49%), Gaps = 5/322 (1%)

Query: 55  YPN----EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE 110
           +PN    +A +  L++  C+ G+    +  L+ +  K   P V++ T LI        ++
Sbjct: 55  FPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLK 114

Query: 111 EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI 170
           + M +++ +L      D  +Y+ ++    K   ++SA  V++ M  RGFS +   Y   I
Sbjct: 115 KAMRVME-ILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMI 173

Query: 171 GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
           G+ C  GK+E A  +M E+   G KP   T+ +LIE      RI E+L   ++++SR L 
Sbjct: 174 GSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLR 233

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P    +N +IR +C+ G   +A   +     +G +P+ ++Y+ L+  +  +   ++  +L
Sbjct: 234 PDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERL 293

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
             +M      P +  ++ LISS C+ G++ EA    ++MK   L P    Y+ L+    +
Sbjct: 294 MKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCK 353

Query: 351 KGNKAKALHLCEEMVSEGLKPS 372
           +G    A+   E+MVS+G  P 
Sbjct: 354 EGRLDLAIEYLEKMVSDGCLPD 375



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 172/366 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E+AF+V   L + G   S+I++  LI       R +    ++  ++     P+  T   
Sbjct: 182 LELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNA 241

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  +CK G     +D +  +  + C+P V+    L+   + + R E+G  L+K M+   
Sbjct: 242 IIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG 301

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + +S+++ +  +   +  A+ V E M ++G + +S+ Y   I A+C+ G+++ A 
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAI 361

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             +++M + G  P    +N ++    K    + +L   E++      P+  A+N M   L
Sbjct: 362 EYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSAL 421

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
             CGN  +A  M++  + KG  P+EITY+ LI    ++G + E + L  +ME     PT+
Sbjct: 422 WSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTV 481

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            ++  ++  +C+  ++ E  +    M     +P    Y  L+      G +A+A+ L   
Sbjct: 482 ISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANS 541

Query: 364 MVSEGL 369
           +   G+
Sbjct: 542 LYRLGV 547


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 125 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVV----- 178

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 179 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 208

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAME 268

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ L P    +N +I  LC+ G+ KQA+ ++     KG  P++ITY+ LI G  
Sbjct: 269 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCC 328

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 329 KEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDAR 388

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM  +G  PS
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 149/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     L   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +  S +   Y T I   C+ G ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN +   
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 298 LKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR 349



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLK-RGFS-ANSFVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+ RG   ++ +V++  I AY 
Sbjct: 24  TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P D T   ++E   K K  +    + E+++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKFWVPID-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 263 VDLAMEIYKQMLSQSLSPD 281


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 160/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 103 FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYKEILE-CGYPASLYFFN 146

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV---------------------------- 178

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   ML  G   + + Y+  I   C+  K+++A
Sbjct: 179 -------SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P    F  LI+G  K  R++ ++   +QM+S+ LLP    +N +I  
Sbjct: 232 NELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQ + ++     KG  P++ITY+ LI G  KEG++    +   +M  ++I   
Sbjct: 292 LCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLD 351

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M +  L P    Y  ++    +KG+  K   L +
Sbjct: 352 EVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 411

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 412 EMQRDGHVPS 421



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 149/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +   + + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y T I   C+ G ++
Sbjct: 240 VKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           + + L+ EM   GLKP   T+  LI+GC K   ++ +  + +QM+   +     A+  +I
Sbjct: 300 QVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L+ G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 360 SGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 24  TMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + ++++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYKEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP   I+ +L+  H + G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 263 VDLAMEIYKQMLSQSLLPD 281


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 166/365 (45%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  + R LE+R     ++ +N +I  + K+        +Y  M     YPN  T  TL
Sbjct: 191 KAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTL 250

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C  G L   V +L+ +  K  +P V   + LI  + +E +++   ++L  M++  +
Sbjct: 251 IYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYV 310

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D + Y+ +V     +  ++ A  V+  M + G +     YT  I   C+   ++EA  
Sbjct: 311 KPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAIS 370

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM++  + P   TFN LI+G  K+ RI       ++M  R  L     ++ +I  LC
Sbjct: 371 LFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALC 430

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  +  QA  +    + +   P+  TY+ LI G  K G ++   +++  +  K     + 
Sbjct: 431 KNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIR 490

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT +IS  C+ G  +EA      M+ +  +P    ++ ++    EK    KA  L  EM
Sbjct: 491 TYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREM 550

Query: 365 VSEGL 369
           ++ GL
Sbjct: 551 IARGL 555



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 171/358 (47%), Gaps = 8/358 (2%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F L  IS+ TLI+ + K        ++ +++ E    P+      +I +LCK   +    
Sbjct: 170 FQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEAC 229

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           ++   ++ K+  P V+  T+LI        + E + LL  M  KN+  D   +S+++ A 
Sbjct: 230 NLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDAL 289

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K   +++A +V   M+K     +   Y + +  Y    +++ A  +   M  +G+ P  
Sbjct: 290 GKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGV 349

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
           +++ ++I+G  K K ++E++S  E+M  + ++P+   FN +I  LC+ G       ++  
Sbjct: 350 QSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDK 409

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
             D+    + ITYS LI    K   + + + L+ +M  + I P +  YT LI  LC+ G+
Sbjct: 410 MRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGR 469

Query: 319 LEEADKYFKIMKSHSLVPG--VDI--YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+ A + F+    H L+ G  +DI  Y  ++    + G   +AL L  +M   G  P+
Sbjct: 470 LKIAQEVFQ----HLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPN 523



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 178/386 (46%), Gaps = 2/386 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ F  A  + ++L+ +G +  L++ N LI+      +  L + +   +L+   +P+  T
Sbjct: 82  MQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVIT 141

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + TLI  LC  G+++  +   D +         I   +LI  + +    +  + L++ + 
Sbjct: 142 LTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLE 201

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D + Y++I+ +  K + +  A  +Y EM  +    N   YTT I  +C  G + 
Sbjct: 202 ERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLI 261

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L+ EM+   + P   TF++LI+   K  +++ +      MM   + P    +N ++
Sbjct: 262 EAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLV 321

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                    K A  +       G +P   +Y+ +I G  K   + E + L+ EM++K++ 
Sbjct: 322 DGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVI 381

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    + SLI  LC+ G++         M+  S +  V  Y SL+    +  +  +A+ L
Sbjct: 382 PNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIAL 441

Query: 361 CEEMVSEGLKPS--TSYLCSASTCRG 384
            ++M+++ ++P   T  +     C+G
Sbjct: 442 FKKMITQEIQPDMYTYTILIDGLCKG 467



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/343 (21%), Positives = 148/343 (43%), Gaps = 1/343 (0%)

Query: 31  HVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCS 90
           H    +D ND V  ++  ML     P       ++S+L K  +  T + +   +  K  +
Sbjct: 43  HYNNHNDHNDAV-ALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGIT 101

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
             ++    LI       +I     +L  +L++    D I  + ++        ++ AL  
Sbjct: 102 SDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKF 161

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           +++++   F  +   Y T I   C+ G+ + A  LM+ +E   +KP    +N++I+   K
Sbjct: 162 HDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCK 221

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
            K + E+ +   +M ++++ P+   +  +I   C  G   +A  +L     K  +P+  T
Sbjct: 222 NKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYT 281

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           +S LI    KEG+++    +   M    + P +  Y SL+       +++ A   F  M 
Sbjct: 282 FSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMA 341

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              + PGV  Y  ++    +     +A+ L EEM  + + P+T
Sbjct: 342 QSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNT 384



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 109/217 (50%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q G +  + S+  +I  + K+   D    +++ M      PN  T  +LI  LCK G+
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGR 399

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    D++D++  +     VI  +SLI  + +   +++ + L K+M+ + +  D   Y++
Sbjct: 400 IAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTI 459

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L+ A  V++ +L +G+  +   YT  I  +C+ G  +EA  L+ +ME+ G
Sbjct: 460 LIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNG 519

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             P   TF+++I    +    +++     +M++R LL
Sbjct: 520 CIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+  LE   YP       
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEESLE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+ + CK G+++    + D I      P V+                            
Sbjct: 141 ILMHSFCKEGEIRLAQSVFDAITKWGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +++ ++   +K+ +L     +   M   G   + + Y+  I   C+  K+++A
Sbjct: 173 -------SFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM + GL P   +F  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 226 NELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA  ++     KG  P++ITY+ LI G  KEG+++   +    M  ++I   
Sbjct: 286 LCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P +  Y  ++    +KG+      L +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMK 405

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 406 EMQRDGYVPS 415



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    +  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  +L    ++ D +      P  +  T+LI    ++ R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  +  EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + ++      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++   C+ G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  KL++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Brachypodium distachyon]
          Length = 464

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 1/282 (0%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMV-LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           P+     S ++      R+ E  V +  R+        T  Y+ ++ A     N   A  
Sbjct: 149 PLSPATFSAVISSYGHSRLPEQAVEVFNRLPHFGCPQTTEVYNALLDALCSNGNFAGAYK 208

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +   M ++G + +   ++T + A+C  GK+ EA   + +M + G +P     +LL++G  
Sbjct: 209 LLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMASRGFRPPVRGRDLLVDGLV 268

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +A R+EE+ ++  +     +LP  + FN + + LC+ G+ K A G+L  A  +G  P+  
Sbjct: 269 RAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRGLCPDIS 328

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY  ++   AK G+I+E  +L+Y        P    Y +++ +LC+ G+  +A  +F  M
Sbjct: 329 TYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVKALCKAGRFGDAFAFFGDM 388

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           KS    P   +Y  LV + +  G    A +   EM   G  P
Sbjct: 389 KSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLVEMSEAGFAP 430



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/323 (20%), Positives = 121/323 (37%), Gaps = 35/323 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E A +V   L   G   +   +N L+  +  +      +++ + M      P+ AT 
Sbjct: 166 RLPEQAVEVFNRLPHFGCPQTTEVYNALLDALCSNGNFAGAYKLLRRMARKGVAPDRATF 225

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL+ A C  G+L+     LD +  +   P V     L+  +++  R+EE      R  +
Sbjct: 226 STLVDAWCASGKLREAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLEEAKAFAVRFTK 285

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++ D                                      + +   A C+ G ++ 
Sbjct: 286 EGVLPDVA-----------------------------------TFNSLAQALCDAGDVKF 310

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+ +  + GL P   T+ +++   AKA +IEE+       +     P  S +  +++
Sbjct: 311 AVGLLADASSRGLCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVK 370

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G    A         KG  PN   Y  L+    + G   +      EM     +P
Sbjct: 371 ALCKAGRFGDAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLVEMSEAGFAP 430

Query: 302 TLPAYTSLISSLCQCGKLEEADK 324
            +P + +++  L   GK + A +
Sbjct: 431 RVPTFNAVVDGLRHLGKHDLAQR 453



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 80/187 (42%)

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +M   GL     TF+ +I     ++  E+++    ++       +   +N ++  LC  G
Sbjct: 142 DMRALGLPLSPATFSAVISSYGHSRLPEQAVEVFNRLPHFGCPQTTEVYNALLDALCSNG 201

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
           N   A  +L     KG +P+  T+S L+  +   G+++E      +M  +   P +    
Sbjct: 202 NFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMASRGFRPPVRGRD 261

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            L+  L + G+LEEA  +        ++P V  + SL     + G+   A+ L  +  S 
Sbjct: 262 LLVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSR 321

Query: 368 GLKPSTS 374
           GL P  S
Sbjct: 322 GLCPDIS 328



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/252 (19%), Positives = 96/252 (38%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A+ + R + ++G +    +F+TL+     S +          M      P       
Sbjct: 203 FAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMASRGFRPPVRGRDL 262

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  L + G+L+       R   +   P V    SL   +     ++  + LL     + 
Sbjct: 263 LVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRG 322

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   Y +++ A  K   +E A  ++   ++ G      +Y   + A C+ G+  +A 
Sbjct: 323 LCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVKALCKAGRFGDAF 382

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
               +M++ G  P    + +L++ C +  R  ++ +Y  +M      P    FN ++  L
Sbjct: 383 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLVEMSEAGFAPRVPTFNAVVDGL 442

Query: 244 CECGNAKQANGM 255
              G    A  M
Sbjct: 443 RHLGKHDLAQRM 454


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 176/375 (46%), Gaps = 3/375 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  V   ++ RGF   ++++N +I       + DL   I++ +L++   P   T   
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI A    G +   + +LD +  K   P  +   ++I  + +E  +++   LL+ +  + 
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D I Y++++   +          +  EM+  G   N   ++  IG  C  GK+EEA 
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++ M+  GLKP    ++ LI G  +  R++ +  + E M+S   LP    +N ++  L
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C  G A QA  +     + G  PN  +Y+ L       G+    L++  ++  + I P  
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK-ALHLCE 362
             Y SLIS LC+ G ++EA +    M+S    P V  Y +++ + L K N+A  A+ +  
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY-NIILLGLCKVNRANDAIEVLA 512

Query: 363 EMVSEGLKPS-TSYL 376
            M  +G +P+ T+Y+
Sbjct: 513 AMTEKGCQPNETTYI 527



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 149/303 (49%), Gaps = 4/303 (1%)

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+    +++L+R +GK   P V    +LI   I+  ++E    +L RM  +  + D + Y
Sbjct: 121 GKATRVMEILER-YGK---PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTY 176

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++ +      L+ AL ++EE+LK         YT  I A    G I+ A  L+ EM +
Sbjct: 177 NIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLS 236

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL+P   T+N +I G  K   ++++      + SR   P    +N ++R L   G   +
Sbjct: 237 KGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSE 296

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
              +++  +  G  PN +T+S LIG   ++G+++E + L   M+ K + P    Y  LI+
Sbjct: 297 GEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIA 356

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+ G+L+ A ++ + M S   +P +  Y +++      G   +AL + E++   G  P
Sbjct: 357 GFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPP 416

Query: 372 STS 374
           + S
Sbjct: 417 NVS 419



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 162/357 (45%), Gaps = 1/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G++  +I    LI     S       R+ + +LE    P+      LIS   K  QL+
Sbjct: 97  DKGYTPDVILCTKLIKGFFNSRNIGKATRVME-ILERYGKPDVFAYNALISGFIKANQLE 155

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +LDR+  +   P V+    +I       +++  + + + +L+ N     I Y++++
Sbjct: 156 NANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILI 215

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A +    ++ A+ + +EML +G   ++  Y   I   C+   +++A  L++ + + G K
Sbjct: 216 EATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCK 275

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N+L+       +  E      +M+S    P+    + +I  LC  G  ++A  +
Sbjct: 276 PDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNL 335

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L    +KG  P+   Y  LI G+ +EG +    +    M      P +  Y ++++ LC+
Sbjct: 336 LRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCR 395

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK ++A + F+ +      P V  Y +L       G++ +AL +  +++++G+ P 
Sbjct: 396 TGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPD 452



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 130/288 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + AF++ R L  RG    +I++N L+  +    +     ++   M+     PN  T  
Sbjct: 258 MVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHS 317

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI  LC+ G+++  V++L  +  K   P       LI    +E R++     L+ M+  
Sbjct: 318 ILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISD 377

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             + D + Y+ I+    +    + AL V+E++ + G   N   Y T   A    G    A
Sbjct: 378 GCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRA 437

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++ ++ N G+ P + T+N LI    +   ++E++     M S +  P+  ++N ++  
Sbjct: 438 LEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLG 497

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           LC+   A  A  +L    +KG  PNE TY  LI G    G   E ++L
Sbjct: 498 LCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 13/141 (9%)

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY------AKEGEIQEVLKLY 291
           +++ R C  G   ++   L   +DKG++P+ I  + LI G+       K   + E+L+ Y
Sbjct: 74  KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERY 133

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +       P + AY +LIS   +  +LE A++    MKS   +P V  Y  ++G    +
Sbjct: 134 GK-------PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSR 186

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
           G    AL + EE++ +  +P+
Sbjct: 187 GKLDLALEIFEELLKDNCEPT 207


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 140/274 (51%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  +E  I     +   + +  +    ++++ ++   +++ +L+    +   M   G
Sbjct: 131 LMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG 190

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K+ R++ ++
Sbjct: 191 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAM 250

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA+ ++     KG  P++ITY+ LI G 
Sbjct: 251 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGC 310

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P  
Sbjct: 311 CKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDT 370

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 371 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 404



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 148/329 (44%), Gaps = 20/329 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     +  
Sbjct: 86  FWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQ 145

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   + G L     +   +H     P V   + LI  +
Sbjct: 146 SVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGL 205

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML K ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 206 CKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDL 265

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A+ L+ EM   GLKP   T+  LI+GC K   +E +  + ++
Sbjct: 266 ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKR 325

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G    A  +L   L  G  P+  TY+ +I  + K+G+
Sbjct: 326 MIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGD 385

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           +    KL  EM+     P++  Y  L++ 
Sbjct: 386 VWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 101 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSV 160

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  +   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 161 VSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 220

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LDKG  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 221 MLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 280

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 281 LKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIR 332



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 7   TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 66

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 67  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHMMKLKYFKLVWGFYEEILECGYPASL 125

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++++ L+ GY + G++ E  +L   
Sbjct: 126 YFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 185

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGR 245

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 246 VDLAMEIYKQMLSQSLSPD 264


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 141/274 (51%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +   +M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKK 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    ++M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIR 343



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD       R    S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDAITKWSLRP---SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    ++M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +          P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 170/367 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + + QRG    L+++N+++H + K+   D      + M+     PN  T   LI 
Sbjct: 238 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 297

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                GQ +  V +   +      P V+  + L+  + +  +I+E   +   M  K    
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  +Y++++        L     +++ ML  G + + + +   I AY   G +++A  + 
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 417

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+KP   T+  +I    +  ++++++    QM+ + + P   A+N +I+  C  
Sbjct: 418 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 477

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +++  ++ G   + + +S +I    K G + +   ++       + P    Y
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 537

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+   C  GK+E+A + F  M S  + P V +Y +LV  + + G   + L L  EM+ 
Sbjct: 538 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ 597

Query: 367 EGLKPST 373
            G+KPST
Sbjct: 598 RGIKPST 604



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 175/374 (46%), Gaps = 2/374 (0%)

Query: 7   AFDVCRYLEQRGF--SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           A D+ R + + G   S +++++NT+I    K    +    +++ M++    P+  T  ++
Sbjct: 201 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 260

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + ALCK   +      L ++  KR  P      +LI       + +E + + K M R ++
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D +  S+++ +  K   ++ A  V++ M  +G + + F Y   +  Y   G + +   
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   M   G+ P   TFN+LI+  A    +++++    +M    + P    +  +I  LC
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A       +D+G +P++  Y+ LI G+   G + +  +L  E+    +   + 
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            ++S+I++LC+ G++ +A   F +  +  L P   +Y  L+  +   G   KAL + + M
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 560

Query: 365 VSEGLKPSTSYLCS 378
           VS G++P+    C+
Sbjct: 561 VSAGIEPNVVVYCT 574



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 162/359 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +    +FN LI         D    I+  M ++   P+  T RT+I+ALC+ G++   
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           ++  +++  +  +P       LI        + +   L+  ++   M  D + +S I+  
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  +  A  +++  +  G   ++ VY+  +  YC  GK+E+A  +   M +AG++P 
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +  L+ G  K  RI+E LS   +M+ R + PS   ++ +I  L + G    A     
Sbjct: 569 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFH 628

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + G + +  TY+ ++ G  K     E + L+ E+   ++   +    ++I  + Q  
Sbjct: 629 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 688

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++EEA   F  +    LVP V  Y  ++   +++G   +A  +   M + G +P++  L
Sbjct: 689 RVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 747



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/344 (20%), Positives = 151/344 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   G    ++++ T+I  + +  + D     +  M++    P++     LI   C  G 
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 479

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    +++  I        ++  +S+I  + +  R+ +   +    +   +  D + YS+
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 539

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +  +E AL V++ M+  G   N  VY T +  YC+ G+I+E   L +EM   G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 599

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP    ++++I+G  +A R   +     +M    +      +N ++R L +     +A 
Sbjct: 600 IKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 659

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +           N IT + +I G  +   ++E   L+  +    + P++  Y+ +I++L
Sbjct: 660 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 719

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + G +EEA+  F  M++    P   +   +V   L+K    +A
Sbjct: 720 IKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 3/223 (1%)

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           R  S  S  Y   +       + E A     ++   GL+      N L+EG  +AKR +E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164

Query: 217 SLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF--SPNEITYSH 273
           +L     +      +P   +++ +++ LC+ G + QA+ +L +  + G   SPN + Y+ 
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           +I G+ KEG++ +   L+ EM  + I P L  Y S++ +LC+   +++A+ + + M +  
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++P    Y +L+  +   G   +A+ + +EM    + P    L
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 327



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/264 (18%), Positives = 116/264 (43%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           ++I+ LCK G++    ++ D        P  +V + L+       ++E+ + +   M+  
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + Y  +V    K+  ++  L ++ EML+RG   ++ +Y+  I    + G+   A
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                EM  +G+     T+N+++ G  K +  +E++   +++ +  +  +    N MI  
Sbjct: 624 KVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 683

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           + +    ++A  +          P+ +TYS +I    KEG ++E   ++  M+     P 
Sbjct: 684 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 743

Query: 303 LPAYTSLISSLCQCGKLEEADKYF 326
                 ++  L +  ++  A  Y 
Sbjct: 744 SRLLNHVVRELLKKNEIVRAGAYL 767


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 179/406 (44%), Gaps = 37/406 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A ++  ++  +G +  + ++N LIH + +S+R+   + + + M + + +PNE T  T
Sbjct: 244 FKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L++     G++     +L+ +     SP  +   +LI   I E   +E + +   M  K 
Sbjct: 304 LLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKG 363

Query: 124 MIHDTIAYSLIV---------------YAKVKMRN---------------------LESA 147
           +I   ++Y +++               Y ++K RN                     L+ A
Sbjct: 364 LIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK-RNGVCVGRITYTGMIDGLCKNGFLDEA 422

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           +V+  EM K G   +   Y+  I  +C  G+++ A  ++  +   GL P    ++ LI  
Sbjct: 423 VVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
           C +   ++E++   E M+     P    FN ++  LC+ G   +A   +      G  PN
Sbjct: 483 CCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            +++  LI GY   GE  +   ++ EM      PT   Y SL+  LC+ G L  A+K+ K
Sbjct: 543 AVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLK 602

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +++        +  +L+    + GN  KA+ L  EMV   + P +
Sbjct: 603 SLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDS 648



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 165/370 (44%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + + + ++ R +   GF+ S+ + N ++  + KS  +  VW   + ML+    P+ AT  
Sbjct: 138 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFN 197

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI+ LC  G  +    ++ ++     +P ++   +++    ++ R +  + LL  M  K
Sbjct: 198 ILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLK 257

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   Y+++++   +        ++  +M KR    N   Y T +  +   GK+  A
Sbjct: 258 GVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIA 317

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+ EM   GL P   TFN LI+G       +E+L     M ++ L+ +  ++  ++  
Sbjct: 318 RQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDG 377

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+      A G        G     ITY+ +I G  K G + E + +  EM    I P 
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPD 437

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y++LI+  C+ G+L+ A +    +    L P   IY +L+      G   + + + E
Sbjct: 438 IVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYE 497

Query: 363 EMVSEGLKPS 372
            M+ EG  P 
Sbjct: 498 AMILEGNTPD 507



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 167/367 (45%), Gaps = 1/367 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  +   +E +G   + +S+  L+  + K+   DL    Y  M  N       T   
Sbjct: 349 FKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LCK G L   V ML+ +      P ++  ++LI    +  R++    ++ R+ R  
Sbjct: 409 MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + I YS ++Y   +M  L+  + +YE M+  G + + F +   + + C+ GK+ EA 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAE 528

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             M+ M + G+ P   +F+ LI G   +    ++ S  ++M      P+   +  +++ L
Sbjct: 529 EFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+   A   L    +   + + +  + LI    K G + + + L+ EM  +SI P  
Sbjct: 589 CKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDS 648

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             YTSLIS LC+ GK   A  + K  ++  +LVP   +Y   V    + G      +  +
Sbjct: 649 FTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQ 708

Query: 363 EMVSEGL 369
           +M   GL
Sbjct: 709 QMDKLGL 715



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 161/361 (44%), Gaps = 4/361 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNE--ATIRTLISALCKG 71
           +E+ G++ +++++NT++H   K  R      +  HM  N++  N    T   LI  LC+ 
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM--NLKGVNADVCTYNMLIHDLCRS 276

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            +      +L  +  +   P  +   +L+     E ++     LL  ML   +  + + +
Sbjct: 277 NRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTF 336

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++   +   N + AL ++  M  +G       Y   +   C+  + + A      M+ 
Sbjct: 337 NALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+     T+  +I+G  K   ++E++    +M    + P    ++ +I   C  G  K 
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKT 456

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  ++      G SPN I YS LI    + G ++E +++Y  M  +  +P    +  L++
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVT 516

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           SLC+ GK+ EA+++ + M S  ++P    ++ L+  +   G   KA  + +EM   G  P
Sbjct: 517 SLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHP 576

Query: 372 S 372
           +
Sbjct: 577 T 577



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 142/316 (44%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N +    LI    + G +Q  +++   +     +P V    +++  I++          L
Sbjct: 122 NPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFL 181

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           K ML++ +  D   +++++       + + +  + ++M K G++     Y T +  YC+ 
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G+ + A  L+  M   G+     T+N+LI    ++ R  +       M  R + P+   +
Sbjct: 242 GRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTY 301

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N ++      G    A  +L   L  G SPN +T++ LI G+  EG  +E LK+++ ME 
Sbjct: 302 NTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEA 361

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K +  T  +Y  L+  LC+  + + A  ++  MK + +  G   Y  ++    + G   +
Sbjct: 362 KGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 357 ALHLCEEMVSEGLKPS 372
           A+ +  EM  +G+ P 
Sbjct: 422 AVVMLNEMSKDGIDPD 437



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/436 (22%), Positives = 170/436 (38%), Gaps = 73/436 (16%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI-RTLI 65
           AF V   + + G   +  ++ +L+  + K   + +    +   L+N+    +  +  TLI
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG-HLIAAEKFLKSLQNVPAAVDTVMCNTLI 620

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKNM 124
           +A+CK G L   V +   +  +   P     TSLI  + ++ +    ++  K    R N+
Sbjct: 621 TAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNL 680

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + + + Y+  V    K    ++     ++M K G + +       I  Y   GKIE+ + 
Sbjct: 681 VPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHD 740

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP---SC-------- 233
           L+ EM N    P   T+N+L+ G +K K +  S      M+   +LP   +C        
Sbjct: 741 LLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGIC 800

Query: 234 ------------------------SAFNEMIRRLCECGNAKQANGM------LTLALDK- 262
                                     FN +I + C  G    A  M      L ++LDK 
Sbjct: 801 ESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKN 860

Query: 263 ----------------------------GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
                                       G SP    Y  L+ G  + G+I+    +  EM
Sbjct: 861 TCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEM 920

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
               I P   A ++++ +L +CGK +EA    + M    LVP +  + +L+ +  + GN 
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNV 980

Query: 355 AKALHLCEEMVSEGLK 370
            +AL L   M + GLK
Sbjct: 981 TEALELRVVMSNCGLK 996



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/373 (20%), Positives = 161/373 (43%), Gaps = 1/373 (0%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++  F   + +++ G +  +++ N +I   ++  + +    +   M    + PN  T   
Sbjct: 700  WKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNI 759

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            L+    K   + T   +   +      P  +   S+IL I +   +E G+ +LK  + + 
Sbjct: 760  LLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRG 819

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            +  D   +++++        +  A  +   M   G S +       +       + +E+ 
Sbjct: 820  VEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESR 879

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             ++ EM   G+ P    +  L+ G  +   I+ +    E+M++ K+ P   A + M+R L
Sbjct: 880  MVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939

Query: 244  CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
             +CG A +A+ +L   L     P   +++ L+  + K G + E L+L   M    +   L
Sbjct: 940  AKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDL 999

Query: 304  PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC-E 362
             +Y  LI+ LC  G +  A + F+ MK    +  V  Y++LVG  L +G +     +  +
Sbjct: 1000 VSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILK 1059

Query: 363  EMVSEGLKPSTSY 375
            ++++ G   + S+
Sbjct: 1060 DLLARGFITAMSF 1072



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 100/213 (46%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           ++N  V+   I  Y   G I+++  + + M   G  P   T N ++    K+       S
Sbjct: 120 NSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWS 179

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + ++M+ RK+ P  + FN +I  LC  G+ K+++ ++      G++P  +TY+ ++  Y 
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+G  +  ++L   M  K ++  +  Y  LI  LC+  +  +     + M+   + P   
Sbjct: 240 KKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEV 299

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +L+     +G    A  L  EM++ GL P+
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPN 332


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 177/388 (45%), Gaps = 32/388 (8%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F  A  +   +  RG + S+ +FNT+I+ + K    D     ++ M E    P+  T
Sbjct: 325 MGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGIT 384

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            RTL    CK G ++    + +++  +   P + +  SLI+ +   ++I + + LL  M 
Sbjct: 385 YRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMD 444

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y  ++        L+ A   Y EM+ +GF+ N  + +  + +    G+I+
Sbjct: 445 TRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRID 504

Query: 181 EANCLMQEM---------------ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           EAN L+Q+M               +NA ++  D         C K   I ++L       
Sbjct: 505 EANMLLQKMVDFDLVLDHRCLEDFQNADIRKLD---------CWK---IADTLDESAIKF 552

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEI 284
           S   LP+   +N  +  LC+ G    A     L L  G F+P+  TY  LI G++  G +
Sbjct: 553 S---LPNNVVYNIAMAGLCKSGKVNDARRFF-LGLSHGSFTPDNFTYCTLIHGFSAAGYV 608

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            E   L  EM  K + P +  Y +L++ LC+ G L+ A + F  +    L+P V  Y  L
Sbjct: 609 NEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNIL 668

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + + G+  +AL L  +M+ EG+ PS
Sbjct: 669 IDGYCKSGSPREALDLRGKMLKEGISPS 696



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 167/354 (47%), Gaps = 34/354 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A +  R +E+ GF L+ +S+N+L+         +    + + M E     N+ T+  L
Sbjct: 83  ERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLL 142

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK    Q  V+  +                   ++++E   E+G+V+         
Sbjct: 143 IKGYCK----QCKVEEAE-------------------KVLREMEKEDGVVV--------- 170

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D  AY  ++    K+  +  A+ V +EMLK G   N FV  + I  YC+ G++ E   
Sbjct: 171 --DEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGER 228

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+  M    LKP   ++  L++G  +     ++ + C+QM+ + + P+   +N +++ LC
Sbjct: 229 LLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLC 288

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G+ K A  +  L L +G +PNE+ Y  L+ G  K G+    L L+ ++  + I+ ++ 
Sbjct: 289 RFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIY 348

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           A+ ++I+ LC+ G+++ A + FK M+     P    Y +L   + + GN  +A 
Sbjct: 349 AFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAF 402



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 152/318 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  ++L   N+LI+   K+ +     R+   M +    P+  +  TL+   C+ G     
Sbjct: 202 GLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKA 261

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++ D++  K   P V+   +L+  + +    ++ + L   ML++ +  + + Y  ++  
Sbjct: 262 FNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDG 321

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             KM +   AL +++++L RG + + + + T I   C+ G+++ A    + ME  G KP 
Sbjct: 322 LFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPD 381

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  L +G  K   +EE+    E+M   ++ PS   +N +I  L       +   +L 
Sbjct: 382 GITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLA 441

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +G SPN +TY  LI G+  +G + +    Y+EM  K  +P +   + ++SSL + G
Sbjct: 442 EMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLG 501

Query: 318 KLEEADKYFKIMKSHSLV 335
           +++EA+   + M    LV
Sbjct: 502 RIDEANMLLQKMVDFDLV 519



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 144/320 (45%), Gaps = 37/320 (11%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LI+  C  G+L         + GK  +P VI+ + ++  + +  RI+E  +L
Sbjct: 450 PNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANML 509

Query: 116 LKRMLRKNMIHD-----------------------------------TIAYSLIVYAKVK 140
           L++M+  +++ D                                    + Y++ +    K
Sbjct: 510 LQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCK 569

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              +  A   +  +    F+ ++F Y T I  +   G + EA  L  EM N GL P   T
Sbjct: 570 SGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITT 629

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N L+ G  K+  ++ +    +++  + L+P+   +N +I   C+ G+ ++A  +    L
Sbjct: 630 YNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKML 689

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G SP+ ITYS LI G+ K+ +++E +KL  EM+  ++  T+  ++ L+    Q G ++
Sbjct: 690 KEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVK 749

Query: 321 EADKYFKIMKSHSLVPGVDI 340
           +  K   +M  H   P   I
Sbjct: 750 KMSKLHNMM--HMACPSAGI 767



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 166/375 (44%), Gaps = 2/375 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRT 63
           E A  V +++ ++G   + ++   LI    K  + +   ++ + M  E+    +E     
Sbjct: 118 EGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGA 177

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   CK G++   + + D +        + V  SLI    +  ++ EG  LL  M + +
Sbjct: 178 LIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD 237

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D+ +Y  +V    +      A  V ++ML++G       Y T +   C +G  ++A 
Sbjct: 238 LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDAL 297

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M   G+ P +  +  L++G  K      +L+  + +++R +  S  AFN MI  L
Sbjct: 298 RLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGL 357

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G    A        + G  P+ ITY  L  GY K G ++E  K+  +ME + I P++
Sbjct: 358 CKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSI 417

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SLI  L    K+ +       M +  L P V  Y +L+    ++G   KA     E
Sbjct: 418 EMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFE 477

Query: 364 MVSEGLKPSTSYLCS 378
           M+ +G  P+   +CS
Sbjct: 478 MIGKGFAPNV-IICS 491



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/329 (22%), Positives = 157/329 (47%), Gaps = 1/329 (0%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           ++ +M +  R P+  +  +L+S L K G+  + V + D++      P V     ++    
Sbjct: 18  VFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYC 77

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +  ++E  +  ++ M +     + ++Y+ +V   V + ++E A  V + M ++G   N  
Sbjct: 78  KAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKV 137

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQ 223
             T  I  YC+  K+EEA  +++EME       DE  +  LI+G  K  ++ +++   ++
Sbjct: 138 TLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDE 197

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   L  +    N +I   C+ G   +   +L         P+  +Y  L+ GY ++G 
Sbjct: 198 MLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGL 257

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
             +   +  +M  K I PT+  Y +L+  LC+ G  ++A + + +M    + P    Y +
Sbjct: 258 SSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCT 317

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L+    + G+ ++AL L +++++ G+  S
Sbjct: 318 LLDGLFKMGDFSRALTLWDDILARGINKS 346



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 1/199 (0%)

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           Y E G ++ A  +   M   G KP   + N L+    K      ++   +QM    ++P 
Sbjct: 6   YAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPD 65

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
                 M+   C+ G  ++A   +      GF  N ++Y+ L+ GY   G+I+    +  
Sbjct: 66  VFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLK 125

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM-KSHSLVPGVDIYESLVGIHLEK 351
            M  K +       T LI   C+  K+EEA+K  + M K   +V     Y +L+  + + 
Sbjct: 126 FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKV 185

Query: 352 GNKAKALHLCEEMVSEGLK 370
           G    A+ + +EM+  GLK
Sbjct: 186 GKMGDAIRVRDEMLKVGLK 204



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 61/129 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G   ++ ++N L++ + KS   D   R++  +      PN  T   LI 
Sbjct: 611 AFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILID 670

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G  +  +D+  ++  +  SP +I  +SLI    ++  +EE M LL  M   N+  
Sbjct: 671 GYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQ 730

Query: 127 DTIAYSLIV 135
               +S +V
Sbjct: 731 TIATFSKLV 739


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 161/382 (42%), Gaps = 40/382 (10%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N LI  + + +    V  +  +M ++   PN  T   L+ ALC+  ++     MLD + 
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            K C P  +   +++  +    R++E   +L             +Y+ ++ A  +   ++
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPV-----AASYNAVILALCREFRMQ 251

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
               V  +M+ RG   N   YTT + A+C+ G++  A  ++  M   G  P   TF  L+
Sbjct: 252 EVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALV 311

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G     R+ ++L   + M++    PS  ++N +IR LC  G+ K A+ +L      G  
Sbjct: 312 GGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCF 371

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT------------------ 307
           PN  TYS LI G++K G++   + ++ +M      P +  YT                  
Sbjct: 372 PNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESL 431

Query: 308 -----------------SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
                            +LI SLC C ++  A   F  M+ H   P    Y  L+     
Sbjct: 432 IDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFR 491

Query: 351 KGNKAKALHLCEEMVSEGLKPS 372
           +GN   AL +  EM + G++ S
Sbjct: 492 EGNCGDALQMVIEMQNHGIELS 513



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 156/328 (47%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N +I  + +  R   V+ +   M+     PN  T  T+++A CK G+L+    +L R+
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM 295

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C+P V   T+L+  +  + R+ + + + K M+ +     T++Y++++     + +L
Sbjct: 296 VITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDL 355

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  V  +M + G   N+  Y+T I  + + G ++ A  +  +M  +G KP    +  +
Sbjct: 356 KGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNM 415

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +    K     ++ S  ++M+     P+   FN +IR LC C    +A G+       G 
Sbjct: 416 VGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGC 475

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  TY+ L+ G  +EG   + L++  EM+   I  +L  Y +++S LCQ     EA  
Sbjct: 476 PPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMF 535

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +   M    + P    + +++  + ++G
Sbjct: 536 FVGRMIVRGIQPDAFTFTAIIHAYCKEG 563



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/399 (19%), Positives = 162/399 (40%), Gaps = 40/399 (10%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           VC  + + G   ++ ++N L+  + ++ R     ++   M      P++ T  T++SALC
Sbjct: 156 VCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALC 215

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
             G++    ++L         P+     ++IL + +E R++E   ++  M+ + +  + I
Sbjct: 216 TLGRVDEATEVL-----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVI 270

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY---------------- 173
            Y+ IV A  K   L  A  +   M+  G + N   +T  +G                  
Sbjct: 271 TYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCM 330

Query: 174 -------------------CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
                              C  G ++ A+ ++ +ME  G  P   T++ LI+G +KA  +
Sbjct: 331 VAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDL 390

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           + ++S    M      P+   +  M+   C+     QA  ++   L +   PN +T++ L
Sbjct: 391 DGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTL 450

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I        +   L +++EM      P    Y  L+  L + G   +A +    M++H +
Sbjct: 451 IRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGI 510

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              +  Y ++V    +     +A+     M+  G++P  
Sbjct: 511 ELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDA 549



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 131/310 (42%), Gaps = 40/310 (12%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           LI  +++E  +    ++   M +  +  +   Y+L+V A  +   + +A  + +EM  +G
Sbjct: 140 LIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKG 199

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              +   Y T + A C  G+++EA  ++     +   P   ++N +I    +  R++E  
Sbjct: 200 CPPDDVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAASYNAVILALCREFRMQEVF 254

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           +    M+ R L P+   +  ++   C+ G  + A  +L   +  G +PN  T++ L+GG 
Sbjct: 255 AVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGL 314

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG- 337
             +G + + L ++  M  +  +P+  +Y  LI  LC  G L+ A      M+ H   P  
Sbjct: 315 FNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNA 374

Query: 338 ----------------------------------VDIYESLVGIHLEKGNKAKALHLCEE 363
                                             V +Y ++VG+  +K    +A  L ++
Sbjct: 375 RTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDK 434

Query: 364 MVSEGLKPST 373
           M+ E   P+T
Sbjct: 435 MLVENCPPNT 444



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 45/311 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + +   G++ S +S+N LI  +           +   M ++  +PN  T  TLI 
Sbjct: 323 ALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLID 382

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G L   + + + +    C P V+V T+++    ++    +   L+ +ML +N   
Sbjct: 383 GFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPP 442

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC-- 184
           +T+ ++ ++ +    R +  AL V+ EM + G   N   Y   +     +G   E NC  
Sbjct: 443 NTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELL-----HGLFREGNCGD 497

Query: 185 ---LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              ++ EM+N G++    T+N ++ G  + +   E++ +  +M+ R + P    F  +I 
Sbjct: 498 ALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIH 557

Query: 242 RLCE---------------------------------CGNAKQANGMLTL--ALDKGFSP 266
             C+                                 C   K  + M+ L   L +G  P
Sbjct: 558 AYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYP 617

Query: 267 NEITYSHLIGG 277
           N +T++ L+ G
Sbjct: 618 NTVTWNVLVRG 628



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 12/204 (5%)

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            M   G++P   T+NLL+    +  R+  +    ++M ++   P    +  ++  LC  G
Sbjct: 159 NMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLG 218

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +A  +L+ A      P   +Y+ +I    +E  +QEV  +  +M  + + P +  YT
Sbjct: 219 RVDEATEVLSAA-----PPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYT 273

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           +++++ C+ G+L  A      M      P V  + +LVG     G    AL + + MV+E
Sbjct: 274 TIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAE 333

Query: 368 GLKPST-SY------LCSASTCRG 384
           G  PST SY      LCS    +G
Sbjct: 334 GWAPSTVSYNVLIRGLCSVGDLKG 357


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 174/403 (43%), Gaps = 39/403 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            F + + ++ RG   + + +NTL+H + K+ +   V R  + +++ I  PN+ T   LI+
Sbjct: 197 GFRLLQVMKSRGVKPNAVVYNTLLHALCKNGK---VGRA-RSLMDEIEEPNDVTFNVLIA 252

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK   L   + +L++       P V+  T ++  +    R+ E + +L+R+  K  + 
Sbjct: 253 AYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLV 312

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D +AY+ ++    ++  ++ A    +EM ++G   N   Y   I  +C+ G  + A  + 
Sbjct: 313 DVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMF 372

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS-------------------- 226
            +M+  G+    +T++ LI+G     RIEE L   E M                      
Sbjct: 373 NDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLY 432

Query: 227 ---------------RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                           KL P     +  I   CE G  K A  +    +++G +PN + Y
Sbjct: 433 KKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVY 492

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
             L+ G+ +EG ++E  +L  EM           + +LI   C  GK E A K    M  
Sbjct: 493 DCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVG 552

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
              VP    Y  L+     KGN  KAL +  +M+ +G+ P +S
Sbjct: 553 RGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSS 595



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 157/351 (44%), Gaps = 12/351 (3%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI-RYPNEATIRTLISALCKGGQLQTY 77
           F+ S  ++  LI  +    R D V+++   M   I   P+E    T+I  L +   +   
Sbjct: 68  FTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHV 127

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +LD I     +P + +  S++  +++ +         K+M+   +  D   +++++  
Sbjct: 128 IKVLDLISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMKG 187

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 +     + + M  RG   N+ VY T + A C+ GK+  A  LM E+E    +P 
Sbjct: 188 LCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIE----EPN 243

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           D TFN+LI    K + + ++L   E+  S   +P      +++  LC  G   +A  ML 
Sbjct: 244 DVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLE 303

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG   + + Y+ L+ G+ + G+I+   +   EME K   P +  Y  LIS  C  G
Sbjct: 304 RVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSG 363

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLV-----GIHLEKGNKAKALHLCEE 363
             + A   F  MK+  +    D Y++L+     G  +E+G   K L L EE
Sbjct: 364 MFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEG--LKILELMEE 412



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 4/311 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E +G  + ++++NTL+    +  +  +  R  + M      PN  T   LIS
Sbjct: 298 AVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILIS 357

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMI 125
             C  G     +DM + +     S       +LI  +    RIEEG+ +L+ M   K   
Sbjct: 358 GFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGS 417

Query: 126 HDTIA-YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              I+ Y+ ++Y   K    + AL    +M K      +   +  I  +CE G ++ A  
Sbjct: 418 GGRISPYNSVLYGLYKKNMWDEALEFLMKMEK--LFPRAVDRSLRILGFCEKGAVKNAKM 475

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  +M N G  P    ++ L+ G  +   + E+     +M+        S FN +I   C
Sbjct: 476 VFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFC 535

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  + A  +L   + +G  P+  TYS LI    ++G  Q+ L ++ +M  K I+P   
Sbjct: 536 GQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSS 595

Query: 305 AYTSLISSLCQ 315
            + SL+  L +
Sbjct: 596 TWNSLLIRLSK 606



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 133/283 (46%), Gaps = 12/283 (4%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA    + +E++G   ++ ++N LI     S   D+   ++  M  +    N  T  TL
Sbjct: 331 KVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTL 390

Query: 65  ISALCKGGQLQTYVDMLDRIH------GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           I  L  GG+++  + +L+ +       G R SP      S++  + ++   +E +  L +
Sbjct: 391 IKGLFFGGRIEEGLKILELMEESKGGSGGRISPY----NSVLYGLYKKNMWDEALEFLMK 446

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M  + +    +  SL +    +   +++A +V+++M+  G + N  VY   +  +C+ G 
Sbjct: 447 M--EKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGN 504

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           + EA  LM EM   G       FN LI G     + E +L   + M+ R  +P    ++ 
Sbjct: 505 LREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSP 564

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           +I  LC  GN ++A  +    ++KG +P+  T++ L+   +KE
Sbjct: 565 LIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKE 607



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 39/218 (17%)

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M  +G++  D TF +L++G     RI +     + M SR + P+   +N ++  LC+ 
Sbjct: 167 KQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKN 226

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE------------------------- 281
           G   +A  ++    D+   PN++T++ LI  Y KE                         
Sbjct: 227 GKVGRARSLM----DEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTM 282

Query: 282 ----------GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
                     G + E +++   +EYK     + AY +L+   C+ GK++ A ++ K M+ 
Sbjct: 283 TKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMER 342

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
              +P V+ Y  L+    + G    AL +  +M ++G+
Sbjct: 343 KGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGI 380


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 170/367 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + + QRG    L+++N+++H + K+   D      + M+     PN  T   LI 
Sbjct: 251 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 310

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                GQ +  V +   +      P V+  + L+  + +  +I+E   +   M  K    
Sbjct: 311 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 370

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  +Y++++        L     +++ ML  G + + + +   I AY   G +++A  + 
Sbjct: 371 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 430

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+KP   T+  +I    +  ++++++    QM+ + + P   A+N +I+  C  
Sbjct: 431 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 490

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +++  ++ G   + + +S +I    K G + +   ++       + P    Y
Sbjct: 491 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 550

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+   C  GK+E+A + F  M S  + P V +Y +LV  + + G   + L L  EM+ 
Sbjct: 551 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQ 610

Query: 367 EGLKPST 373
            G+KPST
Sbjct: 611 RGIKPST 617



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 175/374 (46%), Gaps = 2/374 (0%)

Query: 7   AFDVCRYLEQRGF--SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           A D+ R + + G   S +++++NT+I    K    +    +++ M++    P+  T  ++
Sbjct: 214 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 273

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + ALCK   +      L ++  KR  P      +LI       + +E + + K M R ++
Sbjct: 274 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 333

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D +  S+++ +  K   ++ A  V++ M  +G + + F Y   +  Y   G + +   
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 393

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   M   G+ P   TFN+LI+  A    +++++    +M    + P    +  +I  LC
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A       +D+G +P++  Y+ LI G+   G + +  +L  E+    +   + 
Sbjct: 454 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 513

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            ++S+I++LC+ G++ +A   F +  +  L P   +Y  L+  +   G   KAL + + M
Sbjct: 514 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 573

Query: 365 VSEGLKPSTSYLCS 378
           VS G++P+    C+
Sbjct: 574 VSAGIEPNVVVYCT 587



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 162/359 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +    +FN LI         D    I+  M ++   P+  T RT+I+ALC+ G++   
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           ++  +++  +  +P       LI        + +   L+  ++   M  D + +S I+  
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  +  A  +++  +  G   ++ VY+  +  YC  GK+E+A  +   M +AG++P 
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +  L+ G  K  RI+E LS   +M+ R + PS   ++ +I  L + G    A     
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFH 641

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + G + +  TY+ ++ G  K     E + L+ E+   ++   +    ++I  + Q  
Sbjct: 642 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 701

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++EEA   F  +    LVP V  Y  ++   +++G   +A  +   M + G +P++  L
Sbjct: 702 RVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 760



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/344 (20%), Positives = 150/344 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   G    ++++ T+I  + +  + D     +  M++    P++     LI   C  G 
Sbjct: 433 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 492

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    +++  I        ++  +S+I  + +  R+ +   +    +   +  D + YS+
Sbjct: 493 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 552

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +  +E AL V++ M+  G   N  VY T +  YC+ G+I+E   L +EM   G
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 612

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP    ++++I+G  +A R   +     +M    +      +N ++R L +     +A 
Sbjct: 613 IKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 672

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +           N IT + +I G  +   ++E   L+  +    + P +  Y+ +I++L
Sbjct: 673 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNL 732

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + G +EEA+  F  M++    P   +   +V   L+K    +A
Sbjct: 733 IKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 3/223 (1%)

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           R  S  S  Y   +       + E A     ++   GL+      N L+EG  +AKR +E
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177

Query: 217 SLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF--SPNEITYSH 273
           +L     +      +P   +++ +++ LC+ G + QA+ +L +  + G   SPN + Y+ 
Sbjct: 178 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           +I G+ KEG++ +   L+ EM  + I P L  Y S++ +LC+   +++A+ + + M +  
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++P    Y +L+  +   G   +A+ + +EM    + P    L
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 340



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/264 (19%), Positives = 116/264 (43%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           ++I+ LCK G++    ++ D        P  +V + L+       ++E+ + +   M+  
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + Y  +V    K+  ++  L ++ EML+RG   ++ +Y+  I    + G+   A
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                EM  +G+     T+N+++ G  K +  +E++   +++ +  +  +    N MI  
Sbjct: 637 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           + +    ++A  +          PN +TYS +I    KEG ++E   ++  M+     P 
Sbjct: 697 MFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756

Query: 303 LPAYTSLISSLCQCGKLEEADKYF 326
                 ++  L +  ++  A  Y 
Sbjct: 757 SRLLNHVVRELLKKNEIVRAGAYL 780



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/247 (19%), Positives = 103/247 (41%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           R++  M+     PN     TL++  CK G++   + +   +  +   P  I+ + +I  +
Sbjct: 568 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 627

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            Q  R     +    M    +  D   Y++++    K R  + A+ +++E+       N 
Sbjct: 628 FQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINI 687

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
               T I    +  ++EEA  L   +  + L P   T++++I    K   +EE+      
Sbjct: 688 ITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSS 747

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M +    P+    N ++R L +     +A   L+   ++ FS   +T   L+  ++ +G 
Sbjct: 748 MQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGT 807

Query: 284 IQEVLKL 290
            +E ++ 
Sbjct: 808 CREQIRF 814


>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 548

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 147/280 (52%), Gaps = 2/280 (0%)

Query: 94  IVNTSLILR-IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           +V+ +++L+ ++    ++  + +L  M    ++ D + Y+ ++ A     +L+ A  +++
Sbjct: 205 LVSCNILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFD 264

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
           +++  G   +  +YT  I  YC  GKI++A  +M EME AG++P + T++++IE C K  
Sbjct: 265 DIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEG 324

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           +  E+ +   +M+     P      +++  +C+ G A++A+ M    + K   P+    +
Sbjct: 325 KSAEACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITN 384

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            LI    K G ++E  KL+ E+E K   P+L  Y SLIS LC+ G+L+EA K +  M   
Sbjct: 385 TLIYWLCKSGMVREARKLFDELE-KGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVER 443

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              P    YE+L+    + G   +   +  EMV++G  PS
Sbjct: 444 RYEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPS 483



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 1/294 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            L+S N L+  +      D   ++   M      P+  T  T++SA C    L+    + 
Sbjct: 204 DLVSCNILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLF 263

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D I      P V + T LI    +  +I++   ++  M    +  + + YS+++ A  K 
Sbjct: 264 DDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKE 323

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A  +  EML  G + ++ +    +   C+ GK EEA+ + + M    + P +   
Sbjct: 324 GKSAEACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTIT 383

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI    K+  + E+    +++  +   PS   +N +I  LCE G  ++A  +    ++
Sbjct: 384 NTLIYWLCKSGMVREARKLFDEL-EKGYKPSLLTYNSLISGLCENGELQEAGKVWDDMVE 442

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           + + PN +TY  LI G+ K G+  E   ++ EM  K  +P+   Y  L+ SL +
Sbjct: 443 RRYEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLVDSLSE 496



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 120/275 (43%), Gaps = 1/275 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  + A  V   +   G    ++++ T++      +      +++  ++   R P+   
Sbjct: 218 VRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTM 277

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI   C+ G++Q    ++D +      P  +  + +I    +E +  E   L++ ML
Sbjct: 278 YTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREML 337

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 DT   + +V    +    E A  ++  M+K+    ++ +  T I   C+ G + 
Sbjct: 338 GAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGMVR 397

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L  E+E  G KP   T+N LI G  +   ++E+    + M+ R+  P+   +  +I
Sbjct: 398 EARKLFDELEK-GYKPSLLTYNSLISGLCENGELQEAGKVWDDMVERRYEPNAMTYEALI 456

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           +  C+ G   +   + T  + KG +P+++ Y  L+
Sbjct: 457 KGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLV 491



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 7/189 (3%)

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L++G    + ++ +L   ++M    ++P    +  ++   C   + K A  +    + 
Sbjct: 209 NILLKGLVGVRDLDAALKVLDEMPGWGIVPDVVTYTTVLSAYCAKEDLKGAQKLFDDIIA 268

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+   Y+ LI GY + G+IQ+  ++  EME   + P    Y+ +I + C+ GK  E
Sbjct: 269 GGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAE 328

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS------- 374
           A    + M      P   +   +V +  + G   +A  +   MV + + P  +       
Sbjct: 329 ACNLMREMLGAGHTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIY 388

Query: 375 YLCSASTCR 383
           +LC +   R
Sbjct: 389 WLCKSGMVR 397


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 137/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+E+AN L  EM N GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  +      KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGS 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG ++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 132/286 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  SL  FN L+H   K     L   ++  + +    P+  +  TL++   K G L   
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             + + +      P V   + LI  + +E ++E+   L   ML   ++ + + ++ ++  
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDG 250

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A+ +Y++ML +  S +   Y T I   C+ G +++A  L  EM   GLKP 
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  K   +E +  Y ++M+   +     A+  +I  LC+ G +  A  ML 
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
             L  G  P   TY+ +I  + K+G++    KL  EM+     P++
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 147/333 (44%), Gaps = 2/333 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLI 65
           A +  R  ++  F +   +   +I  + K     LVW  Y+  LE   YP        L+
Sbjct: 85  AIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLE-YGYPASLYFFNILM 143

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            +  K G+++    + D I      P V+   +L+   I+   ++EG  L   M    + 
Sbjct: 144 HSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQ 203

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D   YS+++    K   +E A  +++EML  G   N   +TT I  +C+ G+++ A  +
Sbjct: 204 PDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            ++M +  L P   T+N LI G  K   ++++    ++M  + L P    +  +I   C+
Sbjct: 264 YKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCK 323

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G+ + A       + +    +++ Y+ LI G  +EG   +  K+  EM    + P +  
Sbjct: 324 EGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGT 383

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           YT +I+  C+ G +    K  K M+    VP V
Sbjct: 384 YTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+    + AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L+ G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIR 343



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  +++   ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFS--ANSFVYTTFIGAYC 174
            MIH    + +I  AK      V  +   SA  V+  +L+   +  ++ +V++  I AY 
Sbjct: 18  TMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   +IE   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TXRKVIEHLMKLKYFKLVWGFYEESLEYGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+E+A++ F  M ++ LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 176/370 (47%), Gaps = 6/370 (1%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +FE  F V  Y+   G  +   S    +  + +SD+  +    ++ M+E        ++ 
Sbjct: 160 MFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMT 219

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRM 119
            +I  LCK G+++   D++  + GK   P V+   +L+   ++I+  E + E   +L+ M
Sbjct: 220 IVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNE---MLRLM 276

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               ++++   Y+L++        +  A  V+E+ML+RG  A+  V+T+ I   C+ G +
Sbjct: 277 EMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNM 336

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           + A  L  E+   GL     T+  LI G   + +++ +     +M S+ L  +   FN +
Sbjct: 337 KRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTL 396

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I   C+ G   +A  M  +   KGF  +  TY+ + GG  K    +E  +  + M  K +
Sbjct: 397 INGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGV 456

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P   ++T +I   C+ G L EA++ F+ MK     P V  Y +L+  + +KG   +A  
Sbjct: 457 DPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYR 516

Query: 360 LCEEMVSEGL 369
           L +EM S G+
Sbjct: 517 LKDEMESIGM 526



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 139/298 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG    +  F ++I    K       + ++  + E     N  T   LI   C  GQL 
Sbjct: 313 ERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLD 372

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +++ +  +     +++  +LI    ++  I+E + +   M +K   +D   Y+ I 
Sbjct: 373 AAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIA 432

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K+   E A      M+++G   N+  +T  I  +C+ G + EA  + Q+M+  G K
Sbjct: 433 GGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEK 492

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI+G +K  +++E+    ++M S  +      +  ++   C  G  ++A  +
Sbjct: 493 PNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTL 552

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           L     KG + + +TY+ +I G +KEG  +E  +LY EM    ++P    YTSL+++L
Sbjct: 553 LNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 155/369 (42%), Gaps = 35/369 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE   ++ R +E      +  ++  LI     S +     ++++ MLE     +     +
Sbjct: 266 FEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTS 325

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +IS  CK G ++    + D ++ +          +LI       +++   +L+  M  + 
Sbjct: 326 IISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQG 385

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  + + ++ ++    K   ++ AL + + M K+GF  + F Y T  G  C+  + EEA 
Sbjct: 386 LDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAK 445

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             +  M   G+ P                                   +  +F  MI   
Sbjct: 446 RWLFTMVEKGVDP-----------------------------------NAVSFTIMIDIH 470

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ GN  +A  +      KG  PN +TY+ LI GY+K+G+++E  +L  EME   ++  +
Sbjct: 471 CKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDI 530

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT+L+   C  GK+EEA      +    L   +  Y +++    ++G   +A  L +E
Sbjct: 531 YTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDE 590

Query: 364 MVSEGLKPS 372
           M++ GL P 
Sbjct: 591 MMAAGLTPD 599



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 134/346 (38%), Gaps = 71/346 (20%)

Query: 98  SLILRI-IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
            ++ R+ +     EEG  +   M+   +  D  +  + + A  +   +  +L  +++M++
Sbjct: 149 DMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVE 208

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN-------------- 202
                  +  T  I   C+ G++E A  LM EM   G+KP   T+N              
Sbjct: 209 FKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEG 268

Query: 203 ---------------------LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
                                LLIE    + +I E+    E+M+ R +      F  +I 
Sbjct: 269 VNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIIS 328

Query: 242 RLCECGNAKQA----------------------------NGMLTLA-------LDKGFSP 266
             C+ GN K+A                            +G L  A         +G   
Sbjct: 329 WQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDM 388

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N + ++ LI GY K+G I E L++   ME K     +  Y ++   LC+  + EEA ++ 
Sbjct: 389 NLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWL 448

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             M    + P    +  ++ IH ++GN  +A  + ++M  +G KP+
Sbjct: 449 FTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPN 494



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 3/231 (1%)

Query: 142 RNLESALVVYEEMLKRGFSANSFVY---TTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +NL  ++  +  ++   F    FV          Y +    EE   +   M + GLK  D
Sbjct: 121 KNLRCSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDD 180

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +  + +    ++ ++  SL + ++M+  K+  +  +   +I  LC+ G  ++A  ++  
Sbjct: 181 RSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLE 240

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              KG  PN +TY+ L+  Y K  + + V ++   ME   +      YT LI      GK
Sbjct: 241 MTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGK 300

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + EA+K F+ M    +   + ++ S++    + GN  +A  L +E+   GL
Sbjct: 301 IAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGL 351


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 159/369 (43%), Gaps = 52/369 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR              N L H++ K     LVW  Y+ +LE   YP       
Sbjct: 97  FRVPFDTCR--------------NVLEHLM-KXKYFKLVWGFYKEILE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G+++    + D I      P V+                            
Sbjct: 141 ILMHRFCKEGEMRLAQSVFDAITKWGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +++ ++   +K+ +L+    +   M   G   + + Y+  I   C+  +++EA
Sbjct: 173 -------SFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM + GL P   TF  LI+G  K  R++ ++    QM+++   P    +N +I  
Sbjct: 226 NGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA  +L     KG  P++ITY+ LI G  KEG+++   +L   M  +SI   
Sbjct: 286 LCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YT+LI  LCQ G+  +A+K  + M    L P  + Y  ++    +KG+  KA  L  
Sbjct: 346 DVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLR 405

Query: 363 EMVSEGLKP 371
           EM   G  P
Sbjct: 406 EMQRNGRVP 414



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 38/266 (14%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNT-------------------------------- 28
           MRL +  FD    + + G   S++SFNT                                
Sbjct: 152 MRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYT 208

Query: 29  ---LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
              LI+ + K  R D    ++  ML+N   PN  T  TLI   CK G+L   +D+  ++ 
Sbjct: 209 YSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQML 268

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  SP V+   +LI  + ++  +++   LL  M RK +  D I Y+ ++    K  +LE
Sbjct: 269 NQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A  + E M+K     +  VYT  I   C+ G+  +A  +++EM   GLKP DET+ +++
Sbjct: 329 TAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIM 388

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLP 231
               K   ++++     +M     +P
Sbjct: 389 NEFCKKGDVKKASELLREMQRNGRVP 414



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + + + AK      V  +  +SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G I +A  C     +++   P+D   N+L E   K K  +    + ++++      S 
Sbjct: 78  ESGFIRDAIECFRLTKKHSFRVPFDTCRNVL-EHLMKXKYFKLVWGFYKEILECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  +++EA+  F  M  + LVP    + +L+  H + G 
Sbjct: 197 MRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ +  +M+++G  P 
Sbjct: 257 LDLAMDIYRQMLNQGFSPD 275


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 140/274 (51%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   M+   ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            +D G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + +     S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 4/230 (1%)

Query: 146 SALVVYEEMLKRGFSANS--FVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDETFN 202
           SA  V+  +L+   +  S  +V++  I AY E G + +A  C     E+    P+D T  
Sbjct: 47  SASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFD-TCR 105

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++E   K K  +    + E+ +      S   FN ++    + G  + A  +       
Sbjct: 106 KVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW 165

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              P+ ++++ L+ GY K G++ E  +L   M+   + P +  Y+ LI+ LC+  K+++A
Sbjct: 166 SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++ F  M  + LVP    + +L+  H + G    A+ + ++M+S+ L P 
Sbjct: 226 NELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 275


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 178/387 (45%), Gaps = 12/387 (3%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATI 61
           LF+ +  V   ++  G S S+++FN+L+ ++ K  R ++  ++Y  ML      P+  T 
Sbjct: 164 LFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTF 223

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   C  G +     + + +    C P V+   +L+  + +  ++     ++K M +
Sbjct: 224 NILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGK 283

Query: 122 K--NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           K  ++  + + Y+ ++      R +E AL V+EEM+ +G  AN+  Y T I   CE  K 
Sbjct: 284 KSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKF 343

Query: 180 EEANCLMQEMENAG-LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           E+   +++     G   P   TFN L+     A  ++++L   E+M   K+ P  + ++ 
Sbjct: 344 EKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSA 403

Query: 239 MIRRLCECGNAKQANGMLTLALDK-------GFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           ++R LC+ G+ ++A  +L   L++       G  P    Y+ +     + G+ ++  K +
Sbjct: 404 LVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF 463

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            ++  +      P+Y +LI   C+ G  E   +   +M      P  + YESL+   L  
Sbjct: 464 RQLMRRGTQDP-PSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHM 522

Query: 352 GNKAKALHLCEEMVSEGLKPSTSYLCS 378
                AL   E+M+    +P++S   S
Sbjct: 523 DKPLLALQSLEKMLRSSHRPNSSTFHS 549



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 81/369 (21%), Positives = 147/369 (39%), Gaps = 41/369 (11%)

Query: 2   RLFEVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           R FE   D+       G FS    +FNTL+H    +   D   ++++ M E    P+ AT
Sbjct: 341 RKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSAT 400

Query: 61  IRTLISALCKGGQLQTYVDMLDRI-------HGKRCSPMVIVNTSLILRIIQEERIEEGM 113
              L+ +LC+GG  +   D+LD++        G  C P+V     +   + +  + ++  
Sbjct: 401 YSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAE 460

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
              ++++R+    D  +Y  ++    K    ES   +   ML++ F  +   Y + I   
Sbjct: 461 KAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGL 519

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
               K   A   +++M  +  +P   TF+ ++    +  R  ES S  + M+ + +  + 
Sbjct: 520 LHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNL 579

Query: 234 S-----------------AFN---------------EMIRRLCECGNAKQANGMLTLALD 261
           S                 AF                E+IR LC C    Q + +L  +L+
Sbjct: 580 SFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLE 639

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                +    + +I    +  ++ E   LYY++    +   L     L  SL   GKLEE
Sbjct: 640 SHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLEE 699

Query: 322 ADKYFKIMK 330
           A+   K M+
Sbjct: 700 AESVQKRME 708


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 140/274 (51%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD       R    S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDAITKWSLRP---SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +          P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 172/366 (46%), Gaps = 3/366 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E    V   +  RG    ++ +  LI  + +  +     R+   M E    PN  T   
Sbjct: 180 WESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNV 239

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-- 121
           LI+++CK G ++  +D+   +  K   P V+   +LI  +     ++E M LL+ M++  
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  D + ++ +++   K+  +  AL V   M + G   N   +   IG      K+++
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKK 359

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  LM EM ++GL+P   T+++LI G  K +++E + SY  +M  + + P    +  +++
Sbjct: 360 AMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLK 419

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +C+ G   QA  +    +D+    +   YS +I G  K GE +   +   +M  + + P
Sbjct: 420 AMCDQGMMGQARDLFN-EMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIP 478

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y+  I+   + G L  A++  K M +   VP V +++SL+  +  KG+  K L L 
Sbjct: 479 DAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELT 538

Query: 362 EEMVSE 367
            EM ++
Sbjct: 539 REMTAK 544



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 154/316 (48%), Gaps = 5/316 (1%)

Query: 63  TLISALCKGGQLQTYVDMLDRI-HGKRCS--PMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T+++ALC+ G L   + +L  + H  R +  P  I  T+L+  +  + R  + + LL+ M
Sbjct: 61  TVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSM 120

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               +  D + Y  ++       ++++A+ +  EM + G   N  VY+  +  YC+ G+ 
Sbjct: 121 QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRW 180

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           E    + +EM   G++P    +  LI+   +  +++++    + M  R L P+   +N +
Sbjct: 181 ESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVL 240

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY--K 297
           I  +C+ G+ ++A  +     +KG  P+ +TY+ LI G +   E+ E + L  EM     
Sbjct: 241 INSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGET 300

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P L  + S+I  LC+ G + +A +   +M  +     +  +  L+G  L      KA
Sbjct: 301 RVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKA 360

Query: 358 LHLCEEMVSEGLKPST 373
           + L +EM S GL+P +
Sbjct: 361 MELMDEMASSGLQPDS 376



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 164/381 (43%), Gaps = 40/381 (10%)

Query: 24  ISFNTLIHVVTKS---DRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           +S+NT++  + +    D    + R+  H       PN  +  TL+ ALC   +    V +
Sbjct: 57  VSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGL 116

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L  +      P V+   +LI  +     ++  + LL  M    +  + + YS +++   K
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
               ES   V+EEM  RG   +  +YT  I + C +GK+++A  +M  M   GL+P   T
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236

Query: 201 FNLLIE-----------------------------------GCAKAKRIEESLSYCEQMM 225
           +N+LI                                    G +    ++E+++  E+MM
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296

Query: 226 S--RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
               ++ P    FN +I  LC+ G  +QA  +  +  + G   N + ++ LIGG  +  +
Sbjct: 297 QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHK 356

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           +++ ++L  EM    + P    Y+ LI+  C+  ++E A+ Y   M+   + P    Y  
Sbjct: 357 VKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIP 416

Query: 344 LVGIHLEKGNKAKALHLCEEM 364
           L+    ++G   +A  L  EM
Sbjct: 417 LLKAMCDQGMMGQARDLFNEM 437



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 164/369 (44%), Gaps = 3/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++  G    ++++ TLI  +  +   D    +   M E+   PN      L+ 
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+ ++   + + + G+   P V++ T+LI  + +  ++++   ++  M  + +  
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++++ +  K  ++  AL + + M ++G   +   Y T I       +++EA  L+
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 187 QEMENA--GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +EM      ++P   TFN +I G  K   + ++L     M       +  AFN +I  L 
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLL 352

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                K+A  ++      G  P+  TYS LI G+ K  +++       EM ++ + P   
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPV 412

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  L+ ++C  G + +A   F  M  +  +     Y +++    + G K  A    ++M
Sbjct: 413 HYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAA-AYSTMIHGAFKSGEKKIAEEFLKDM 471

Query: 365 VSEGLKPST 373
           + EGL P  
Sbjct: 472 IDEGLIPDA 480



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 3/214 (1%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENA---GLKPYDETFNLLIEGCAKAKRIEESL 218
           ++  Y T + A C  G ++ A  L++ M +      +P   ++  L+      +R  +++
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                M    + P    +  +IR LC+  +   A  +L    + G  PN + YS L+ GY
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K G  + V K++ EM  + I P +  YT+LI SLC+ GK+++A +   +M    L P V
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  L+    ++G+  +AL L + M  +G++P 
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPD 268


>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 171/367 (46%), Gaps = 5/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN--IRYPNEATIRTL 64
            FD+   L++ G+   + ++N       K  R DL+W++Y+ M+E    +  +  T+  L
Sbjct: 177 TFDM---LKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYL 233

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A C   ++    ++L +      +P       LI    +E+     + L+  M+ KN 
Sbjct: 234 IQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNR 293

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y  I+    K      A  V+  +  RG++ +  +YTT I  +C+ G++E+A+ 
Sbjct: 294 NPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASK 353

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM + G  P + ++N LI G  K   ++E++   ++M+      +  + N +I  LC
Sbjct: 354 LWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLC 413

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A         K    + ITY+ LI G+ +EG++ +   L  E++ K + P+  
Sbjct: 414 LHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTS 473

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +Y  LI  LCQ G ++EA + +  M +  L P V   + ++    E+G   + +     M
Sbjct: 474 SYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITM 533

Query: 365 VSEGLKP 371
           +   LKP
Sbjct: 534 LKSNLKP 540



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 35/263 (13%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+     TLI   CK GQL                                   E+   L
Sbjct: 330 PDMVMYTTLIHGFCKMGQL-----------------------------------EDASKL 354

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M+ K  + +  +Y+ ++Y   K+ NL+ A+ +Y++ML  G+   +    T I   C 
Sbjct: 355 WFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCL 414

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +G+ +EA    +EM    +     T+N LI+G  +  ++ +S    +++ ++ L PS S+
Sbjct: 415 HGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSS 474

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I++LC+ G+ ++A  M     ++G  P   T  H+I G  ++G + E ++    M 
Sbjct: 475 YAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITML 534

Query: 296 YKSISPTLPAYTSLISSLCQCGK 318
             ++ P    +  LI SL Q GK
Sbjct: 535 KSNLKPQKETFYKLIQSLIQIGK 557



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 143/325 (44%), Gaps = 10/325 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE----- 110
           P  A++   I  +C+GG ++  V   D +      P V          ++  R +     
Sbjct: 153 PEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKL 212

Query: 111 -EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
            EGM  ++  ++K++  +T+ Y  ++ A      +  A  +  + L+ G +  +  +   
Sbjct: 213 YEGM--METGVQKDVDIETVGY--LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKL 268

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  +C+         L+  M      P   T+  +I G  K     ++      +  R  
Sbjct: 269 ISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGY 328

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P    +  +I   C+ G  + A+ +    +DKGF PNE +Y+ LI G+ K G + E +K
Sbjct: 329 APDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMK 388

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           LY +M       T  +  +LI  LC  G+ +EA  +F+ M   ++V  V  Y +L+    
Sbjct: 389 LYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFC 448

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTS 374
            +G   ++  L +E+ ++GL+PSTS
Sbjct: 449 REGKVLQSTDLLKELQAKGLQPSTS 473



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 112/241 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+V   L+ RG++  ++ + TLIH   K  + +   +++  M++    PNE +  TLI 
Sbjct: 316 AFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIY 375

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G L   + +  ++         +   +LIL +    R +E     + M  KN++ 
Sbjct: 376 GFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVC 435

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I Y+ ++    +   +  +  + +E+  +G   ++  Y   I   C+ G ++EA  + 
Sbjct: 436 DVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMW 495

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M N GL+P   T + +I G  +   + E + +   M+   L P    F ++I+ L + 
Sbjct: 496 NDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQI 555

Query: 247 G 247
           G
Sbjct: 556 G 556



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 2/216 (0%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           FS        +I   CE G +EEA      ++ AG +PY ET+N   + C K  R +   
Sbjct: 151 FSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIW 210

Query: 219 SYCEQMMSRKLLPSCS--AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
              E MM   +           +I+  C      +A  +L  +L+ G +P    ++ LI 
Sbjct: 211 KLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLIS 270

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G+ KE     VL+L + M  K+ +P +  Y  +I+  C+     +A + F  +K     P
Sbjct: 271 GFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAP 330

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + +Y +L+    + G    A  L  EM+ +G  P+
Sbjct: 331 DMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPN 366


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 158/370 (42%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  YQ +LE   YP       
Sbjct: 86  FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYQEILE-CGYPASLYFFN 129

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 130 ILMHRFCKEGNIRVAQSVFDAITKWGLRPSVV---------------------------- 161

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   M   G   + + Y+  I   C+  K++EA
Sbjct: 162 -------SYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEA 214

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ LLP    +N +I  
Sbjct: 215 NELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 274

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ GB KQA+ ++     KG  P++ITY+ LI G  KEG++    +    M  ++I   
Sbjct: 275 LCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 334

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S    P    Y  ++    +KG+      L +
Sbjct: 335 DVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLK 394

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 395 EMQRDGHVPS 404



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 3/277 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ +  FD    + + G   S++S+NTL+    +    D  +R+   M  +   P+  T
Sbjct: 141 IRVAQSVFDA---ITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYT 197

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 198 YSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQML 257

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            ++++ D I Y+ ++Y   K  BL+ A V+  EM  +G   +   YTT I   C+ G ++
Sbjct: 258 SQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLD 317

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S    P    +  +I
Sbjct: 318 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMII 377

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              C+ G+    + +L      G  P+ +TY+ L+ G
Sbjct: 378 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S   V++  I AY 
Sbjct: 7   TMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSGLITAYL 66

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + ++++      S 
Sbjct: 67  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYQEILECGYPASL 125

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ GN + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 126 YFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSA 185

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K++EA++ F  M    LVP    + +L+  H + G 
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGR 245

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 246 VDLAMEIYKQMLSQSLLPD 264


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 140/274 (51%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPS 415



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGCMPSV 416



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + +     S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G  P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +          P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 171/367 (46%), Gaps = 5/367 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN--IRYPNEATIRTL 64
            FD+   L++ G+   + ++N       K  R DL+W++Y+ M+E    +  +  T+  L
Sbjct: 213 TFDM---LKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYL 269

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I A C   ++    ++L +      +P       LI    +E+     + L+  M+ KN 
Sbjct: 270 IQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNR 329

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y  I+    K      A  V+  +  RG++ +  +YTT I  +C+ G++E+A+ 
Sbjct: 330 NPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASK 389

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM + G  P + ++N LI G  K   ++E++   ++M+      +  + N +I  LC
Sbjct: 390 LWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLC 449

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G   +A         K    + ITY+ LI G+ +EG++ +   L  E++ K + P+  
Sbjct: 450 LHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTS 509

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +Y  LI  LCQ G ++EA + +  M +  L P V   + ++    E+G   + +     M
Sbjct: 510 SYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITM 569

Query: 365 VSEGLKP 371
           +   LKP
Sbjct: 570 LKSNLKP 576



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 35/263 (13%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+     TLI   CK GQL                                   E+   L
Sbjct: 366 PDMVMYTTLIHGFCKMGQL-----------------------------------EDASKL 390

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M+ K  + +  +Y+ ++Y   K+ NL+ A+ +Y++ML  G+   +    T I   C 
Sbjct: 391 WFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCL 450

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +G+ +EA    +EM    +     T+N LI+G  +  ++ +S    +++ ++ L PS S+
Sbjct: 451 HGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSS 510

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I++LC+ G+ ++A  M     ++G  P   T  H+I G  ++G + E ++    M 
Sbjct: 511 YAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITML 570

Query: 296 YKSISPTLPAYTSLISSLCQCGK 318
             ++ P    +  LI SL Q GK
Sbjct: 571 KSNLKPQKETFYKLIQSLIQIGK 593



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 143/325 (44%), Gaps = 10/325 (3%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE----- 110
           P  A++   I  +C+GG ++  V   D +      P V          ++  R +     
Sbjct: 189 PEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKL 248

Query: 111 -EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
            EGM  ++  ++K++  +T+ Y  ++ A      +  A  +  + L+ G +  +  +   
Sbjct: 249 YEGM--METGVQKDVDIETVGY--LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKL 304

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I  +C+         L+  M      P   T+  +I G  K     ++      +  R  
Sbjct: 305 ISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGY 364

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P    +  +I   C+ G  + A+ +    +DKGF PNE +Y+ LI G+ K G + E +K
Sbjct: 365 APDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMK 424

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           LY +M       T  +  +LI  LC  G+ +EA  +F+ M   ++V  V  Y +L+    
Sbjct: 425 LYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFC 484

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTS 374
            +G   ++  L +E+ ++GL+PSTS
Sbjct: 485 REGKVLQSTDLLKELQAKGLQPSTS 509



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 112/241 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF+V   L+ RG++  ++ + TLIH   K  + +   +++  M++    PNE +  TLI 
Sbjct: 352 AFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIY 411

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G L   + +  ++         +   +LIL +    R +E     + M  KN++ 
Sbjct: 412 GFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVC 471

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I Y+ ++    +   +  +  + +E+  +G   ++  Y   I   C+ G ++EA  + 
Sbjct: 472 DVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMW 531

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M N GL+P   T + +I G  +   + E + +   M+   L P    F ++I+ L + 
Sbjct: 532 NDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQI 591

Query: 247 G 247
           G
Sbjct: 592 G 592



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 2/216 (0%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           FS        +I   CE G +EEA      ++ AG +PY ET+N   + C K  R +   
Sbjct: 187 FSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIW 246

Query: 219 SYCEQMMSRKLLPSCS--AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
              E MM   +           +I+  C      +A  +L  +L+ G +P    ++ LI 
Sbjct: 247 KLYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLIS 306

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G+ KE     VL+L + M  K+ +P +  Y  +I+  C+     +A + F  +K     P
Sbjct: 307 GFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAP 366

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + +Y +L+    + G    A  L  EM+ +G  P+
Sbjct: 367 DMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPN 402


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 172/370 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           + +   + R +E  G + +L++ + LI+  ++   N L + ++ ++L+    P+  T+ T
Sbjct: 85  YSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTT 144

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G +   +   D++         +   +LI  + +  + +  + +L+R+  K 
Sbjct: 145 LIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKL 204

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ I+    K + +  A   Y EM+ +        Y T I   C  G++++A 
Sbjct: 205 VRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAI 264

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ +M    + P   TF++L++   K  +++E+ +    MM + + P+   +N ++   
Sbjct: 265 GLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGY 324

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C      +A  +       G +P+  +YS +I G+ K   + E +KL+ EM  K I P +
Sbjct: 325 CLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDV 384

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y SLI  LC+ G++  A K    M      P +  Y SL+    +  +  KA+ L  +
Sbjct: 385 VTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTK 444

Query: 364 MVSEGLKPST 373
           +    ++PS 
Sbjct: 445 LKDHNIQPSV 454



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 161/326 (49%), Gaps = 6/326 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF L+ +S+ TLI+ + K  +      + + +   +   +     T+I  +CK   +   
Sbjct: 169 GFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDA 228

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D    +  KR  P V+   +LI  +    ++++ + LL +M+ +N+      +S++V A
Sbjct: 229 FDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDA 288

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A  V+  M+K+    N   Y + +  YC   ++ +A  +   M   G+ P 
Sbjct: 289 FCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPD 348

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             +++++I G  K K ++E++   E+M  +++ P    +N +I  LC+ G    A  ++ 
Sbjct: 349 VHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIG 408

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+G  PN ITY+ L+    K   + + ++L  +++  +I P++  Y  LI+ LC+ G
Sbjct: 409 EMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSG 468

Query: 318 KLEEADKYFKIMKSHSLVPG--VDIY 341
           +L++A K F+      LV G  +D+Y
Sbjct: 469 RLKDAQKVFE----DVLVNGYNIDVY 490



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 150/313 (47%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A ++ R ++ +   L ++ +NT+I  V K    +  +  Y  M+     P   T  TL
Sbjct: 191 KAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTL 250

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  GQL+  + +L ++  +  +P V   + L+    +E +++E   +   M++K++
Sbjct: 251 ICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDV 310

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+ ++     +  +  A  ++  M + G + +   Y+  I  +C+   ++EA  
Sbjct: 311 KPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMK 370

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +EM    + P   T+N LI+G  K+ RI  +L    +M  R   P+   +N ++  LC
Sbjct: 371 LFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALC 430

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  +  +A  +LT   D    P+  TY+ LI G  K G +++  K++ ++     +  + 
Sbjct: 431 KNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVY 490

Query: 305 AYTSLISSLCQCG 317
            Y ++I   C+ G
Sbjct: 491 TYNTMIKGFCKKG 503



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 161/359 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L Q+  + S+I F  ++  + K++   +V  +++ M  N    N  T+  LI+   + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                 +   I  K   P  I  T+LI  +  +  I + +    ++L      + ++Y  
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+   ++AL +   +  +    +  +Y T I   C+   + +A     EM    
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N LI G     ++++++    +M+   + P+   F+ ++   C+ G  K+A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +  + + K   PN +TY+ L+ GY    E+ +   ++  M    ++P + +Y+ +IS  
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+   ++EA K F+ M    + P V  Y SL+    + G  + AL L  EM   G  P+
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPN 418


>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
 gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
 gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 172/368 (46%), Gaps = 1/368 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL +  + + + + + G   ++  +N L+H  +KS   +   ++   M E   +P+  T 
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLIS  CK       + + DR+     +P ++   S I    +E R+ E   L  R ++
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIK 300

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
            ++  + + Y+ ++    +M +++ AL + E M  RGFS     Y + +   CE G+I E
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           AN L+ EM    ++P + T N LI    K + +  ++   ++M+   L     ++  +I 
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+    + A   L   ++KGFSP   TYS L+ G+  + +  E+ KL  E E + +  
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y  LI  +C+  +++ A   F+ M+   LV    I+ ++   +   G   +A  L 
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALF 540

Query: 362 EEMVSEGL 369
           + M +  L
Sbjct: 541 DVMYNRRL 548



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 34/335 (10%)

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
            K G +   + + ++I      P +   T L+  ++++   +    + K+M++  ++ + 
Sbjct: 144 AKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANI 203

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
             Y+++V+A  K  + E A  +  EM ++G   + F Y T I  YC+     EA  +   
Sbjct: 204 HVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263

Query: 189 MENAGLKPYDETFNLLIEGCAKAKR----------------------------------I 214
           ME +G+ P   T+N  I G ++  R                                  I
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDI 323

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           +E+L   E M SR   P    +N ++R+LCE G  ++AN +LT    K   P+ IT + L
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I  Y K  ++   +K+  +M    +   + +Y +LI   C+  +LE A +    M     
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            PG   Y  LV     +  + +   L EE    GL
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 1/241 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           A ++++ + VK R  ++   ++++M+K G  AN  VY   + A  + G  E+A  L+ EM
Sbjct: 170 ACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEM 229

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           E  G+ P   T+N LI    K     E+LS  ++M    + P+   +N  I      G  
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +     D   + N +TY+ LI GY +  +I E L+L   ME +  SP +  Y S+
Sbjct: 290 REATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI 348

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  LC+ G++ EA++    M    + P      +L+  + +  +   A+ + ++M+  GL
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408

Query: 370 K 370
           K
Sbjct: 409 K 409



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 143/306 (46%), Gaps = 1/306 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +E+ G + +++++N+ IH  ++  R     R+++ + +++   N  T  TLI 
Sbjct: 257 ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVT-ANHVTYTTLID 315

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+   +   + + + +  +  SP V+   S++ ++ ++ RI E   LL  M  K +  
Sbjct: 316 GYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEP 375

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I  + ++ A  K+ ++ SA+ V ++M++ G   + + Y   I  +C+  ++E A   +
Sbjct: 376 DNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEEL 435

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G  P   T++ L++G     + +E     E+   R L    + +  +IRR+C+ 
Sbjct: 436 FSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKL 495

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
                A  +      KG   + + ++ +   Y + G++ E   L+  M  + +   L  Y
Sbjct: 496 EQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555

Query: 307 TSLISS 312
            S+ +S
Sbjct: 556 KSISAS 561



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 118/249 (47%), Gaps = 3/249 (1%)

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           +    ++ +I YAK  M N   ++VV+E++   G   +    T  + +  +    +    
Sbjct: 132 VSHVFSWLMIYYAKAGMIN--DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK 189

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + ++M   G+      +N+L+  C+K+   E++     +M  + + P    +N +I   C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  +       G +PN +TY+  I G+++EG ++E  +L+ E++   ++    
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHV 308

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT+LI   C+   ++EA +  ++M+S    PGV  Y S++    E G   +A  L  EM
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368

Query: 365 VSEGLKPST 373
             + ++P  
Sbjct: 369 SGKKIEPDN 377


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 180/396 (45%), Gaps = 39/396 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD-M 80
           ++ ++  +++   ++ R +L    +  +L      ++    T++  LC   +    V  +
Sbjct: 7   TIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVL 66

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI--HDTIAYSLIVYAK 138
           L R+    C P       ++ R+  + R ++ + LL+ M ++  +   D + Y+ +++  
Sbjct: 67  LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGF 126

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K   +  A  +Y EM+++GF  +   + + I A C+   ++ A  L+++M + G+ P  
Sbjct: 127 FKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNK 186

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+  +I G +   R EE+     +M  R L+P   ++N  +  LC+ G +K+A  +   
Sbjct: 187 VTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYS 246

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY--------------------------- 291
              KG  PN +TY  L+ GYA EG   +++  +                           
Sbjct: 247 MAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGM 306

Query: 292 --------YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
                    EM+ + +SP +  Y++LIS+LC+ G+L +A   F  M    + P   +Y S
Sbjct: 307 MDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHS 366

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGL-KPSTSYLCS 378
           L+      G+  KA  L  EM++ G+ +P+ ++  S
Sbjct: 367 LIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNS 402



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 163/370 (44%), Gaps = 3/370 (0%)

Query: 7   AFDVCRYL--EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           A D+ R +  E+   S  ++++NT+IH   K  +      +Y  M++    P+  T  ++
Sbjct: 98  ALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSI 157

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ALCK   +     +L ++      P  +  TS+I       R EE   + + M  + +
Sbjct: 158 INALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGL 217

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           I D ++++  + +  K    + A  ++  M  +G   N   Y   +  Y   G   +   
Sbjct: 218 IPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMS 277

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
               M+  G+      F +LI+  AK   ++E++    +M  + L P    ++ +I  LC
Sbjct: 278 FFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALC 337

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS-PTL 303
             G    A       +  G  PN + Y  LI G+   G++ +  +L YEM    I  P +
Sbjct: 338 RMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNI 397

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             + S++ S+C+ G++ +A   F ++K       + ++ +L+  +   G   KA  + + 
Sbjct: 398 AFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDA 457

Query: 364 MVSEGLKPST 373
           M+S G+ P T
Sbjct: 458 MISAGIGPDT 467



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 1/322 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A  + R +  RG    ++S+N+ +  + K  R+     I+  M      PN  T   
Sbjct: 202 WEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGI 261

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+      G     +   + + G       +V T LI    +   ++E M++L  M  + 
Sbjct: 262 LLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D   YS ++ A  +M  L  A+  + +M+  G   N+ VY + I  +C +G + +A 
Sbjct: 322 LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAK 381

Query: 184 CLMQEMENAGL-KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            L+ EM N G+ +P    FN ++    K  R+ ++    + +           FN +I  
Sbjct: 382 ELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDG 441

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C  G   +A  +L   +  G  P+  TY+ L+ GY K G I + L L+ EM  K I PT
Sbjct: 442 YCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPT 501

Query: 303 LPAYTSLISSLCQCGKLEEADK 324
              Y  ++  L + G+   A K
Sbjct: 502 TVTYNIILDGLFRAGRTVAAQK 523



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 164/364 (45%), Gaps = 1/364 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G   + + F  LI    K    D    I   M      P+  T  TLISALC+ G+
Sbjct: 282 MKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGR 341

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-S 132
           L   VD  +++ G    P  +V  SLI        + +   L+  M+   +    IA+ +
Sbjct: 342 LADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFN 401

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            IV++  K   +  A  +++ +   G  ++  ++ T I  YC  G++ +A  ++  M +A
Sbjct: 402 SIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISA 461

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G+ P   T+N L+ G  K+ RI++ L+   +M  +K+ P+   +N ++  L   G    A
Sbjct: 462 GIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAA 521

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ML   +  G + +  TY+ ++ G  +     E + ++ ++   ++   +    ++I+S
Sbjct: 522 QKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINS 581

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +    + EEA   F  +    LVP    Y  ++   L++G+  +A ++   M   G  P 
Sbjct: 582 MYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPC 641

Query: 373 TSYL 376
           +  L
Sbjct: 642 SRLL 645



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/357 (19%), Positives = 142/357 (39%), Gaps = 36/357 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +G S  + +++TLI  + +  R       +  M+     PN     +LI   C  G 
Sbjct: 317 MQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGD 376

Query: 74  LQTYVDML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           L    +++ + ++     P +    S++  I +E R+ +   +   +       D I ++
Sbjct: 377 LVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFN 436

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++     +  +  A  V + M+  G   ++F Y T +  Y + G+I++   L +EM + 
Sbjct: 437 TLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDK 496

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            +KP   T+N++++G  +A R   +     +M+      S   +N +++ LC      +A
Sbjct: 497 KIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEA 556

Query: 253 -----------------------NGMLTLAL------------DKGFSPNEITYSHLIGG 277
                                  N M T+              D G  PN  TY  +I  
Sbjct: 557 IVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRN 616

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
             KEG ++E   ++  ME    +P        I +L + G++ +A  Y   +   S+
Sbjct: 617 LLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 40/371 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++A  + R + + G   +++ +N LI  ++ S+R +  + + + M  +   P + T  +
Sbjct: 473 LDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNS 532

Query: 64  LISALCKGGQLQTYVDMLD--RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           +   LC+   +   +DM+   R+HG    P +   T L+ ++ + +R  E    L  M+R
Sbjct: 533 IFGCLCRREDVTGALDMVREMRVHGHE--PWIKHYTLLVKQLCKRKRSAEACNFLAEMVR 590

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +  + D +AYS  +   VK++ ++ AL ++ ++  RG+  +   Y T             
Sbjct: 591 EGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNT------------- 637

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
                                 LI G  K KR+ E+    ++M+++ L+PS   +N +I 
Sbjct: 638 ----------------------LINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID 675

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G+  QA   L+  + K   PN ITY+ LI G    G   + + L+ EM  K  SP
Sbjct: 676 GWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSP 735

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              ++ +LI  LC+CG  + A  YF+ M      P   +Y +L+   +   N   A  + 
Sbjct: 736 NRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFISNKNPTLAFEIL 794

Query: 362 EEMVSEGLKPS 372
           +EMV++G  P 
Sbjct: 795 KEMVAKGKFPD 805



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 179/417 (42%), Gaps = 51/417 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +E  G  L+  +F  LIH   +  R D   ++++ M ++   P+ +    LI 
Sbjct: 287 AFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIG 346

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL---------RIIQEERIE----EGM 113
            LC   +++  + +L  +      P + + + LI          R+I EER+E    E M
Sbjct: 347 GLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLI-EERLEDLDTEAM 405

Query: 114 VLL------------------------------------KRMLRKNMIH-DTIAYSLIVY 136
           +LL                                    K  + K M+  DT ++S+++ 
Sbjct: 406 LLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVID 465

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  L+ AL ++ +M++ G   N  +Y   I       ++EE   L++EM+ +G +P
Sbjct: 466 GLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRP 525

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T N +     + + +  +L    +M      P    +  ++++LC+   + +A   L
Sbjct: 526 TQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFL 585

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              + +GF P+ + YS  I G+ K   + + L+++ ++  +   P + AY +LI+  C+ 
Sbjct: 586 AEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKV 645

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++ EA      M +  LVP V  Y  L+    + G+  +A H    MV +  +P+ 
Sbjct: 646 KRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNV 702



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/422 (19%), Positives = 171/422 (40%), Gaps = 59/422 (13%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R F  A D      Q GF+ +  ++N +   ++ + +N  +  +   ++ +    +   +
Sbjct: 113 RFFNWASD------QGGFNHNCYTYNAMASCLSHARQNAPLSLLSMDIVNSRCAMSPGAL 166

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              I  L   G ++    + D++   R C P       L+  I +   I+   + LK M 
Sbjct: 167 GFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMC 226

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 D    + ++ A    R  + AL V+ E+  RG+  +  V +  +  + + G+++
Sbjct: 227 DSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGW-VDGHVLSILVLTFSKCGEVD 285

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L++ ME+ G++  ++TF +LI G  +  R++++L   ++M      P  S ++ +I
Sbjct: 286 KAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALI 345

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI---------------- 284
             LC     ++A  +L+   + G  P+    S LI   ++E +I                
Sbjct: 346 GGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAM 405

Query: 285 --------------QEVLKLYYEMEYKS-------------------ISPTLPAYTSLIS 311
                         + V K YY +   +                   + P   +++ +I 
Sbjct: 406 LLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVID 465

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH-LCEEMVSEGLK 370
            LC  GKL+ A   F+ M        V +Y +L+   L   N+ +  + L +EM   G +
Sbjct: 466 GLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLID-KLSNSNRLEECYLLLKEMKGSGFR 524

Query: 371 PS 372
           P+
Sbjct: 525 PT 526



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 2/209 (0%)

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGL-KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           FI      G +EEAN L  +++   L  P   +FN L+E  +K+  I+      ++M   
Sbjct: 169 FIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDS 228

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
              P       +++  C      +A  +      +G+    +  S L+  ++K GE+ + 
Sbjct: 229 GWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHV-LSILVLTFSKCGEVDKA 287

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            +L   ME   I      +  LI    +  ++++A + FK M+     P V +Y++L+G 
Sbjct: 288 FELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGG 347

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
              K    KALHL  EM   G+ P    L
Sbjct: 348 LCAKKEIEKALHLLSEMKELGIDPDIQIL 376



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 1/196 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++  + A ++ R +  RG+   ++++NTLI+   K  R      I   M+     P+  T
Sbjct: 610 IKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVT 669

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI   CK G +      L R+ GK   P VI  T+LI  +    R ++ + L   M 
Sbjct: 670 YNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMR 729

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    + I++  +++   K    ++AL+ + EM +R  + ++ VY   I ++       
Sbjct: 730 GKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFISNKNPT 788

Query: 181 EANCLMQEMENAGLKP 196
            A  +++EM   G  P
Sbjct: 789 LAFEILKEMVAKGKFP 804


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 170/389 (43%), Gaps = 39/389 (10%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF L  +S+ TLI+ + K+       ++ + +   +  PN     T+I +LCK   +  
Sbjct: 163 KGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIH 222

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV- 135
             D+   +  KR  P V+  T+LI   +   R++E + L  +ML KN+  D   ++++V 
Sbjct: 223 ASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVD 282

Query: 136 ------------------------------------YAKVKMRNLESALVVYEEMLKRGF 159
                                               Y  VK  N   A  V+  M +RG 
Sbjct: 283 GLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQEN--KATFVFNTMARRGV 340

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           + +   Y+  I   C+   ++EA  L +EM +  + P   T+N LI+G  K  RI ++  
Sbjct: 341 TPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWD 400

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
              +M +R        ++ ++  LC+     +A  ++T   D+G  PN  TY+ L+ G  
Sbjct: 401 LVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLC 460

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K G +++   +Y ++  K     +  Y  +++ LC+ G  +EA      M+ +  +P   
Sbjct: 461 KNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAV 520

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            YE+LV    E     KA+ L  EM+ +G
Sbjct: 521 TYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 144/313 (46%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   LI+  C  G L     +L +I      P  +  T+LI  +    ++ E +  
Sbjct: 97  PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              ++ K    D ++Y  ++    K     +AL V  ++       N  +Y T I + C+
Sbjct: 157 HDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCK 216

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              +  A+ L  EM    + P   T+  LI GC    R++E++    QM+ + + P    
Sbjct: 217 DKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYT 276

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN ++  LC+ G  K+A  +L + + +G   N +TY+ L+ GY    +  +   ++  M 
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA 336

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + ++P + +Y+ +I+ LC+   ++EA   FK M S S+ P    Y SL+   L+ G  +
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRIS 396

Query: 356 KALHLCEEMVSEG 368
            A  L  EM + G
Sbjct: 397 DAWDLVNEMHNRG 409



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 113/257 (43%)

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           K+M  K +  D   +++++     + +L  A  V  ++ K GF  ++   TT I   C  
Sbjct: 88  KQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLN 147

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           GK+ EA     ++   G      ++  LI G  K      +L    ++    + P+   +
Sbjct: 148 GKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMY 207

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I  LC+      A+ + +  + K   P+ +TY+ LI G    G ++E + L+ +M  
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K+I P +  +  L+  LC+ G++++A     +M    +   +  Y SL+  +     + K
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327

Query: 357 ALHLCEEMVSEGLKPST 373
           A  +   M   G+ P  
Sbjct: 328 ATFVFNTMARRGVTPDV 344



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 118/264 (44%), Gaps = 1/264 (0%)

Query: 107 ERIEEGMVLLKRMLR-KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           + +++ +     +L  +N +     ++ I+ + VK+ +  +A+   ++M  +    + F 
Sbjct: 42  DNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFT 101

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           +   I  +C  G +  A  ++ ++   G  P   T   LI+G     ++ E+L + + ++
Sbjct: 102 FNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVI 161

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           ++       ++  +I  LC+ G  + A  +L         PN + Y+ +I    K+  + 
Sbjct: 162 AKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVI 221

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
               L  EM  K I P +  YT+LI      G+L+EA   F  M   ++ P V  +  LV
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 346 GIHLEKGNKAKALHLCEEMVSEGL 369
               ++G   KA ++   M+ +G+
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGV 305



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 1/234 (0%)

Query: 141 MRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           + N++ A+  +  +L  R      F +   + +  +      A    ++ME   ++P   
Sbjct: 41  IDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLF 100

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           TFN+LI        +  + S   ++      P       +I+ LC  G  ++A       
Sbjct: 101 TFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDV 160

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           + KGF  ++++Y  LI G  K GE +  L++  +++   + P +  Y ++I SLC+   +
Sbjct: 161 IAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLV 220

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             A      M    + P V  Y +L+   L  G   +A+ L  +M+ + +KP  
Sbjct: 221 IHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDV 274



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 88/188 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++ + A ++ + +  +  + + +++N+LI  + K  R    W +   M    +  +  T 
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L+ ALCK  Q+   + ++ +I  +   P +   T L+  + +  R+++   + + +L 
Sbjct: 418 SSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLI 477

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K    D   Y+++V    K    + AL +  +M   G   ++  Y T + A  E  K ++
Sbjct: 478 KGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDK 537

Query: 182 ANCLMQEM 189
           A  L++EM
Sbjct: 538 AVKLLREM 545


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 161/344 (46%), Gaps = 6/344 (1%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A ++   +++ G   S+  +N ++  +   +R  +++ +Y+ M  +   PN  T  
Sbjct: 125 LAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYN 184

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+ ALCK  ++     +L  +  K C P  +  T++I         E GMV   R L +
Sbjct: 185 VLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVI-----SSMCEVGMVKEGRQLAE 239

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y+ ++    K R+ +  + +  EM+++G S N   Y+T I      G+IE A
Sbjct: 240 RFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELA 299

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFNEMIR 241
             L+ +M   G  P   T + L++GC       ++L    QM+    L P+  A+N +++
Sbjct: 300 FSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQ 359

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  GN  +A  +     + G SPN  TY  LI G+ K G ++  + ++ +M      P
Sbjct: 360 GFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCP 419

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +  YTS++ +LC+  K +EA+   +IM   +  P V  + + +
Sbjct: 420 NVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 463



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 6/356 (1%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  + ++F  +I  +    + D V  + Q M     + +E    ++IS   + G  +  V
Sbjct: 71  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 130

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           +M  RI    C P V +   ++  ++ E RI+   ++ + M R     +   Y++++ A 
Sbjct: 131 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 190

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K   ++ A  +  EM  +G   N+  YTT I + CE G ++E   L +  E     P  
Sbjct: 191 CKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PVV 245

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
             +N LI G  K +  +  +    +M+ + + P+  +++ +I  L   G  + A  +L  
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQ 305

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCG 317
            L +G  PN  T S L+ G    G   + L ++ +M     + P + AY +L+   C  G
Sbjct: 306 MLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHG 365

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +++A   F  M+     P +  Y SL+    ++G+   A+++  +M++ G  P+ 
Sbjct: 366 NIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNV 421



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/405 (21%), Positives = 171/405 (42%), Gaps = 42/405 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++ + V R +++ GF  ++ ++N L+  + K+++ D   ++   M      PN  +  T+
Sbjct: 162 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTV 221

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS++C+ G ++       R   +R  P+V V  +LI  + +E   + G+ L+  M+ K +
Sbjct: 222 ISSMCEVGMVKE-----GRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGI 276

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG---------------------FSA-- 161
             + I+YS ++        +E A  +  +MLKRG                     F A  
Sbjct: 277 SPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALD 336

Query: 162 -------------NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
                        N   Y T +  +C +G I++A  +   ME  G  P   T+  LI G 
Sbjct: 337 MWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGF 396

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K   +E ++    +M++    P+   +  M+  LC     K+A  ++ +   +  +P+ 
Sbjct: 397 TKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSV 456

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYK-SISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            T++  I G    G +    K++ +ME +    P +  Y  L+  L +  ++EEA    +
Sbjct: 457 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTR 516

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +    +      Y +L+      G    AL L  +M+  G  P 
Sbjct: 517 EIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPD 561



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 158/360 (43%), Gaps = 39/360 (10%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G S ++IS++TLI+ ++ S + +L + +   ML+   +PN  T+ +L+      G   
Sbjct: 273 EKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTF 332

Query: 76  TYVDMLDR-IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
             +DM ++ I G    P V+   +L+        I++ + +   M       +   Y  +
Sbjct: 333 DALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSL 392

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K  +LE A+ ++ +ML  G   N  VYT+ + A C + K +EA  L++ M     
Sbjct: 393 INGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENC 452

Query: 195 KPYDETFNL------------------------------------LIEGCAKAKRIEESL 218
            P   TFN                                     L++G AKA RIEE+ 
Sbjct: 453 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAY 512

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
               ++  R +  S S +N ++   C  G    A  ++   +  G SP+EIT + +I  Y
Sbjct: 513 GLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAY 572

Query: 279 AKEGEIQEVLKL--YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
            K+G+ +  +++        +   P + +YT++I  LC+    E+    F+ M S  ++P
Sbjct: 573 CKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/286 (19%), Positives = 119/286 (41%), Gaps = 6/286 (2%)

Query: 94  IVNTSLILRIIQEERIEEGMVLLKRMLRKNMI-HDTIAYSLIVYAKVKMRNLESALVVYE 152
           I  ++++ R+ QE  +   +   K +   N+  H  + + +++        ++S   + +
Sbjct: 40  IKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQ 99

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
           +M  +GF  +  ++ + I  Y + G  E A  +   ++  G  P  + +N +++      
Sbjct: 100 QMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 159

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           RI+        M      P+   +N +++ LC+      A  +L    +KG  PN ++Y+
Sbjct: 160 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYT 219

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            +I    + G ++E  +L    E     P +  Y +LI+ LC+    +   +    M   
Sbjct: 220 TVISSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGLCKERDYKGGVELMSEMVEK 274

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            + P V  Y +L+      G    A  L  +M+  G  P+   L S
Sbjct: 275 GISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSS 320


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 137/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ NL+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  +      KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGS 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG ++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPS 415



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L  EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+    +P++
Sbjct: 397 VWTGSKLLKEMQRDGYAPSV 416



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIR 343



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G++P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFS--ANSFVYTTFIGAYC 174
            MIH    + +I  AK      V  +   SA  V+  +L+   +  ++ +V++  I AY 
Sbjct: 18  TMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G + E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 175/422 (41%), Gaps = 53/422 (12%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F++AF + + +  +GF     +++ +I  + ++ + +  + ++Q M      P+  T
Sbjct: 266 MGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYT 325

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI + CK G ++      D +    CS  V+  T+L+   ++ +++ +   +  RM+
Sbjct: 326 YTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMI 385

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVY----------------------------- 151
                 +TI YS +V    K   ++ A  VY                             
Sbjct: 386 DAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVV 445

Query: 152 ----------------------EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
                                 + ML  G   N  +Y   I  +C+ GKI+ A  +   M
Sbjct: 446 TYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRM 505

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G  P   T+  LI+   K +R++ ++    QM+     P+   +  MI  LC  G  
Sbjct: 506 SKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGEC 565

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           ++A  +L++  +KG SPN +TY+ LI G  K G++   L+L+ +M  K  +P    Y  L
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVL 625

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I+  C  G L+EA      MK       +  Y S+V    +K     +L L EE+ S G 
Sbjct: 626 INHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKK--FIASLGLLEELESHGT 683

Query: 370 KP 371
            P
Sbjct: 684 VP 685



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 171/367 (46%), Gaps = 11/367 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+  G+  S  ++N L+ V+  + + D+ +R+ + M E+    ++ T+     ALCK G+
Sbjct: 31  LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + M++R   K  +   ++ T +I  +++    +E +  L RM   + I + + Y  
Sbjct: 91  WSDALVMIEREDFKLDT---VLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 147

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   +K + L     +   M+K G + N  ++ + + +YC       A  L++ M + G
Sbjct: 148 LLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCG 207

Query: 194 LKPYDETFNLLIEGCAKAKRIEES--LSYCEQMMSRKLLPSCSAFNEM-----IRRLCEC 246
             P    +N+ I      + +     L+  E++    L  SC   N++      R LC  
Sbjct: 208 CPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSC-VLNKVNTANFARCLCGM 266

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  ++ + + KGF P+  TYS +I    +  ++++   L+ EM+   ++P +  Y
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI S C+ G +E+A  +F  M+S      V  Y +L+  +L+     +A  +   M+ 
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 367 EGLKPST 373
            G  P+T
Sbjct: 387 AGCPPNT 393



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 160/373 (42%), Gaps = 22/373 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ TL+    K  +     RI   M++    PN +   +L+ + C          +L
Sbjct: 141 NVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 200

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL------KRMLRKNMIHDTIAYSLIV 135
            R+    C P  +     I  I   E +    +L       + ML  + + + +  +   
Sbjct: 201 KRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 260

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                M   + A  + + M+ +GF  ++  Y+  I   CE  K+E+A  L QEM++ G+ 
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ +LI+   KA  IE++ S+ ++M S     +   +  ++    +     QA+ +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM----------------EYKSI 299
               +D G  PN ITYS L+ G  K GEIQ+  ++Y ++                   SI
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P +  Y +LI  LC+  K+ +A +    M S+   P   IY++L+    + G    A  
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQE 500

Query: 360 LCEEMVSEGLKPS 372
           +   M   G  P+
Sbjct: 501 VFLRMSKCGYLPT 513



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 156/350 (44%), Gaps = 36/350 (10%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LI  LCK  ++    ++LD +    C P  I+  +LI    +  +I+    +
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             RM +   +     Y+ ++ A  K R L+ A+ V  +M++   + N   YT  I   C 
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ ++A  L+  ME  G  P   T+  LI+G  K+ +++ SL    QM ++   P+   
Sbjct: 562 IGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVT 621

Query: 236 FNEMIRRLCECGNAKQANGMLT--------------LALDKGFS---------------- 265
           +  +I   C  G   +A+ +L+               ++ +GFS                
Sbjct: 622 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESH 681

Query: 266 ---PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA---YTSLISSLCQCGKL 319
              P    Y  LI  ++K G ++E L+L+ EM   S S  + +   YTSLI +LC   +L
Sbjct: 682 GTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQL 741

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           E+A + +  +    +VP + ++  L+   ++     +AL LC  +  EG+
Sbjct: 742 EKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 3/144 (2%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           PS + +N +++ L   G       +     + GF  ++ T         KEG   + L +
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
               ++K +   L   T +IS L +    +EA  +   M+ +S +P V  Y +L+   L+
Sbjct: 98  IEREDFK-LDTVL--CTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154

Query: 351 KGNKAKALHLCEEMVSEGLKPSTS 374
           K        +   M+ EG  P+ S
Sbjct: 155 KKQLGWCKRIINMMMKEGCNPNPS 178


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 168/376 (44%), Gaps = 9/376 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTK----SDRNDLVWRIYQHMLENIRYPNEATIR 62
           A D    + + G     +S+NT++  + K     +  DL+  +    L     PN+ T  
Sbjct: 232 ALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLS----PNKHTYN 287

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   C+ G L+    +++ +      P V     L+     + +I+E   +   M + 
Sbjct: 288 MLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKM 347

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N++ D + Y+ ++    + R+      + EEM K+G   N+  Y   +   C+ G + EA
Sbjct: 348 NVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEA 407

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
              + +ME  GL P   T+N LI    KA ++ ++    ++M S+ L       N ++  
Sbjct: 408 TTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHC 467

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC      +A  +L  A  +G+  +E++Y  LI GY K+ +    L L+ EM+ + I P+
Sbjct: 468 LCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPS 527

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y S+I  LCQ  K+++A      M  + LVP    Y  ++     +GN  KA     
Sbjct: 528 TITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHN 587

Query: 363 EMVSEGLKPSTSYLCS 378
           EM+    KP   Y C+
Sbjct: 588 EMIENLFKPDV-YTCN 602



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 177/406 (43%), Gaps = 35/406 (8%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL + A D+   ++ +G S +  ++N L+    +        ++ + M  N   P   T 
Sbjct: 262 RLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTY 321

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L++  C  G++     + D +      P V+   +LI    Q     E   L++ M +
Sbjct: 322 NMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDK 381

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +  + + Y++I+    K  N+  A    ++M + G S +   Y T IGAYC+ GK+ +
Sbjct: 382 KGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGK 441

Query: 182 ANCLMQEMENAGLK-----------------PYDETFNLL------------------IE 206
           A  +M EM + GLK                   DE +NLL                  I 
Sbjct: 442 AFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILIL 501

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  K ++ + +L+  ++M  R+++PS   +N +I  LC+     QA   L   L+ G  P
Sbjct: 502 GYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP 561

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +E TY+ +I G+  EG +++  + + EM      P +     L+  LC+ G LE+A K F
Sbjct: 562 DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLF 621

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + S      V  Y +++    ++G    A  L  EM ++ L P 
Sbjct: 622 NTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPD 667



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 151/312 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++++G   + +++N ++  + K             M EN   P+  T  TLI A CK G+
Sbjct: 379 MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGK 438

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     M+D +  K          +++  +  E++++E   LL    ++  I D ++Y +
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI 498

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K    + AL +++EM +R    ++  Y + IG  C+  K+++A   + EM   G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P + T+N++I G      +E++  +  +M+     P     N ++R LC  G  ++A 
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    + KG   + +TY+ +I    KEG+ +    L  EME K + P    Y  +I++L
Sbjct: 619 KLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678

Query: 314 CQCGKLEEADKY 325
              G+++EA+++
Sbjct: 679 TDAGRIKEAEEF 690



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 183/377 (48%), Gaps = 15/377 (3%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR---YPNEATIR 62
           +A  +   +++  +  +L++ NTL++ + +   +  +    Q + ++I+    PN  +  
Sbjct: 158 LATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFN 217

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C   +++  +D ++++    C P  +   +++  +++   ++E   LL  M  K
Sbjct: 218 ILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSK 277

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  +   Y+++V    ++  L+ A  V E M +       + Y   +  +C  GKI+EA
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +  EME   + P   T+N LI+GC++ +   E  S  E+M  + +  +   +N +++ 
Sbjct: 338 FRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKW 397

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           +C+ GN  +A   L    + G SP+ +TY+ LIG Y K G++ +  ++  EM  K +   
Sbjct: 398 MCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKID 457

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL------EKGNKAK 356
                +++  LC   KL+EA   + ++ S S   G  + E   GI +      EKG+  +
Sbjct: 458 TWTLNTILHCLCVEKKLDEA---YNLLCSAS-KRGYILDEVSYGILILGYFKDEKGD--R 511

Query: 357 ALHLCEEMVSEGLKPST 373
           AL+L +EM    + PST
Sbjct: 512 ALNLWDEMKERQIMPST 528



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 160/350 (45%), Gaps = 3/350 (0%)

Query: 36  SDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIV 95
           SDR   + ++  H   ++  P++  + T I A  +  Q      + +++      P ++ 
Sbjct: 118 SDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLT 177

Query: 96  NTSL---ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
             +L   ++R      I     +LK  ++  ++ +T ++++++Y       ++ AL    
Sbjct: 178 CNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVN 237

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
           +M + G   ++  Y T + A  +   ++EA  L+ +M++ GL P   T+N+L+ G  +  
Sbjct: 238 KMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLG 297

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
            ++E+    E M    LLP+   +N ++   C  G   +A  +          P+ +TY+
Sbjct: 298 LLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYN 357

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            LI G ++  +  EV  L  EM+ K +      Y  ++  +C+ G + EA      M+ +
Sbjct: 358 TLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEEN 417

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
            L P    Y +L+G + + G   KA  + +EM S+GLK  T  L +   C
Sbjct: 418 GLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHC 467



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 23/297 (7%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++     +RG+ L  +S+  LI    K ++ D    ++  M E    P+  T  ++I 
Sbjct: 477 AYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIG 536

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+  ++   +D L+ +      P       +I     E  +E+       M+      
Sbjct: 537 GLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKP 596

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D    ++++    +   LE AL ++  ++ +G   +   Y T I + C+ GK E A  L+
Sbjct: 597 DVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLL 656

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS------------ 234
            EME   L P   T+ ++I     A RI+E+  +  +M+   ++   +            
Sbjct: 657 TEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTS 716

Query: 235 -----------AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
                      A+++ I  LC     K A  +      +G + N+ TY +L+ G  K
Sbjct: 717 EVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIK 773



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 25/236 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A D    + + G      ++N +IH        +  ++ +  M+EN+  P+  T 
Sbjct: 542 RKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTC 601

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  LC+ G L+  + + + +  K     V+   ++I  + +E + E    LL  M  
Sbjct: 602 NILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEA 661

Query: 122 KNMIHDTIAYSLIVYA-----------KVKMRNLESALVVYEEMLKRG------------ 158
           K +  D   Y +I+ A           +  ++ +ES  +V+++ LK G            
Sbjct: 662 KKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESG-IVHDQNLKLGKGQNVLTSEVSE 720

Query: 159 -FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
            F   S  Y+  I   C   K ++A  L  E+   G+     T+  L+EG  K ++
Sbjct: 721 HFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 166/390 (42%), Gaps = 36/390 (9%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN L+ ++ +S+  D  W I+  +   +   +  +   +I   C+ G       +L  +
Sbjct: 126 TFNNLMCLLIRSNYFDKAWWIFNELKSKVVL-DAYSFGIMIKGCCEAGYFVKGFRLLAML 184

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                SP V++ T+LI    +   +     L  +M R  ++ +   YS+++    K    
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQ 244

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                +YE M + G   N++ Y   I  YC  G +++A  +  EM   G+     T+N+L
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNIL 304

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  + K+  E++    ++    L P+   +N +I   C+ G    A  +       G 
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL 364

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS------------ 312
           SP  +TY+ LI GY+K   +   L L  EME + I+P+   YT LI +            
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACE 424

Query: 313 -----------------------LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
                                  LC  G ++EA K FK +    L P   IY +++  + 
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYC 484

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           ++G+  +AL L  EMV  G+ P+ +  CS 
Sbjct: 485 KEGSSYRALRLLNEMVHSGMVPNVASFCST 514



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 168/385 (43%), Gaps = 38/385 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLI-------------HVVTKSDRNDLV-------- 42
           F   F +   LE+ G S +++ + TLI             ++  K DR  LV        
Sbjct: 174 FVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSV 233

Query: 43  --------------WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR 88
                         +++Y++M  +   PN      LIS  C GG +     +   +  K 
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKG 293

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
            +  V+    LI  + + ++  E + L+ ++ +  +  + + Y++++     +  +++A+
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
            ++ ++   G S     Y T I  Y +   +  A  L++EME   + P   T+ +LI+  
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
           A+    E++      M    L+P    ++ +I  LC  GN K+A+ +     +    PN 
Sbjct: 414 ARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNS 473

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           + Y+ +I GY KEG     L+L  EM +  + P + ++ S I  LC+  K +EA+     
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQ 533

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGN 353
           M +  L P V +Y+    +H  KG+
Sbjct: 534 MINSGLKPSVSLYKM---VHKVKGD 555



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 36/243 (14%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN---------------------- 202
           +Y T + AY      ++A   +  M + G  P   TFN                      
Sbjct: 91  LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL 150

Query: 203 ------------LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
                       ++I+GC +A    +       +    L P+   +  +I   C+ GN  
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +       G  PN  TYS L+ G+ K+G  +E  ++Y  M+   I P   AY  LI
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGL 369
           S  C  G +++A K F  M+   +  GV  Y  L+G  L +G K  +A+ L  ++   GL
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIG-GLCRGKKFGEAVKLVHKVNKVGL 329

Query: 370 KPS 372
            P+
Sbjct: 330 SPN 332


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 169/352 (48%), Gaps = 6/352 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
            RG + + I+++ L+  + K +R ++ V  +   +      P+  T  T+I  LCK G+L
Sbjct: 212 HRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 271

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +  VD+ + +    C+P  I   SLI    +   ++E + LL +M+  N   D I Y+ +
Sbjct: 272 RDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTL 328

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           + A  KM  L+ A  ++++M+    S +   +T+ +   C  G++E+A  L++E+   G 
Sbjct: 329 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 388

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+N +++G  K+ ++ ++        SR  +P+   +N ++   C  G   QA  
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448

Query: 255 MLT-LALDKGFSPNEIT-YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            L  L  + G  P  +  Y+ ++    ++G   + ++ Y EM  +   P    + +++ +
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           LC+  + ++A +  + M  +   PG    +++V  +   G   KA  L  E+
Sbjct: 509 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 181/368 (49%), Gaps = 11/368 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG S   +  NT++  +  +        ++  M E +   N  T   LI  LCK   
Sbjct: 37  IRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAE-LGAVNHTTYYNLIHPLCKARL 95

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH--DTIAY 131
           L   + +L  +  +  +P  +++  +I  + +  R+   + + ++M   N  H  D + Y
Sbjct: 96  LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM---NDAHPPDFLTY 152

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +V+   K   L  A+ V +EM+      ++   T  + + C   ++++A  L++EM +
Sbjct: 153 TKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLH 212

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            G+     T++ L++G  K +R++E+++    ++  R   P    ++ +I  LC+ G  +
Sbjct: 213 RGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLR 272

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +     +   +P  ITY+ LIGGY + G++ E ++L  +M   + +P +  YT+L+
Sbjct: 273 DAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLM 329

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S+ C+ G+L++A + F+ M ++ L P V  + SLV     +G    AL L EE+   G  
Sbjct: 330 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 389

Query: 371 PST-SYLC 377
           P+  +Y C
Sbjct: 390 PTIYTYNC 397



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 167/356 (46%), Gaps = 6/356 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
             +++  L+H ++K+ R     ++ Q M+     P+  T+  ++ +LC G ++    +++
Sbjct: 148 DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 207

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-VLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           + +  +  +   I  ++L+  + + ER++E + +LL  + R+    D + YS ++    K
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCK 267

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              L  A+ ++EEM     +  +  Y + IG YC  G ++EA  L+ +M +    P   T
Sbjct: 268 AGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +  L+    K  R++++    +QM++ KL P    F  ++  LC  G  + A  +L    
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G  P   TY+ ++ GY K  ++++  +L  +   +   P    Y  L++  C+ G+ +
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444

Query: 321 EADKYFKIMKSHS--LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +A +Y   + S        V +Y  ++      G    A+   EEM+  G  P+ +
Sbjct: 445 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA 500



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 152/313 (48%), Gaps = 5/313 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RGF+  +++++T+I  + K+ R      I++ M      P   T  +LI   C+ G 
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGD 302

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + +L ++    C+P VI  T+L+    +  R+++   L ++M+   +  D + ++ 
Sbjct: 303 MDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V        +E AL + EE+ +RG     + Y   +  YC+  ++ +A  L+ +  + G
Sbjct: 363 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR--KLLPSCSAFNEMIRRLCECGNAKQ 251
             P   T+N+L+ GC +A R +++L Y +Q+ S       S + +  ++  LC  G    
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 482

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A       + +G+ P   T++ ++    K  + Q+  +L  EM     +P      +++S
Sbjct: 483 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 542

Query: 312 SLCQCGKLEEADK 324
           + C+ G +++AD+
Sbjct: 543 AYCRAGMIQKADE 555


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 171/372 (45%), Gaps = 35/372 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +F+ A D     ++RGF   ++S N L++ + +  + D+   IY+H+      PN+ T  
Sbjct: 172 MFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYG 231

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             I ALC+ G  +  VD+   +     +P  +  ++ I  +   +R + G   L+ +   
Sbjct: 232 IFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAA 291

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N   DT AY+ ++        L+ A  V+ +M+  G + + ++Y   I AYC+ G + +A
Sbjct: 292 NWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQA 351

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  +M + G+K                                    +C   + +++ 
Sbjct: 352 VALHNDMVSNGIK-----------------------------------TNCVIVSSILQC 376

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LCE G A +         D G   +E+ Y+ ++    K G+++E ++L  EM+ + +S  
Sbjct: 377 LCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLD 436

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT+LI+  C  GKL +A   F+ MK   + P +  Y  LVG     G K +AL L +
Sbjct: 437 VVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLD 496

Query: 363 EMVSEGLKPSTS 374
            + ++GLKP+++
Sbjct: 497 CIGTQGLKPNSA 508



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 152/334 (45%), Gaps = 19/334 (5%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           + +E     ++ ALCK G+++  V++L+ + G+R S  V+  T+LI     + ++ +   
Sbjct: 399 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN 458

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           + + M  + +  D + Y+++V    +    + AL + + +  +G   NS  +   I   C
Sbjct: 459 MFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLC 518

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             GK++EA   +  +E+  L    E ++ +++G  KA    ++     ++  + +L    
Sbjct: 519 MAGKVKEAEAFLNTLEDKCL----ENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKK 574

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           +  +++  LC  G   +A  +L   L     PN+I Y  LIG + ++G+++    ++  +
Sbjct: 575 SCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDML 634

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH------ 348
             + I+P +  YT +I+  C+   L EA   F  MK   + P V  Y  ++  H      
Sbjct: 635 VERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLK 694

Query: 349 ------LEKGN---KAKALHLCEEMVSEGLKPST 373
                   KG+   K  A     EM   G+KP  
Sbjct: 695 MARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDV 728



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 156/362 (43%), Gaps = 15/362 (4%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRI---YQHMLENIRYPNEATIR 62
           +A+     L++ GF  ++ ++  LI V+ +       WR+    Q +L  I    E+ + 
Sbjct: 79  LAWSFFTQLKESGFQHNVDTYAALIRVLCR-------WRLERKLQSLLSEIVGSKESVLG 131

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             I+AL     L+     ++  H    S +++V   L+   ++    +E +  L +  R+
Sbjct: 132 FDITALFD--VLREGGGEVEGEHS---SVLILVLDMLVKAYVRVGMFDEAIDALFQTKRR 186

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             +   ++ + ++   ++   ++ A+ +Y  + + G + N + Y  FI A C  G  EEA
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEA 246

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             + +EME AG+ P   T +  IEG    KR +        + +        A+  +IR 
Sbjct: 247 VDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRG 306

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C     K+A  +    +++G +P+   Y  LI  Y K G + + + L+ +M    I   
Sbjct: 307 FCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTN 366

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
               +S++  LC+ G   E    FK  +   +     +Y  +V    + G   +A+ L  
Sbjct: 367 CVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLN 426

Query: 363 EM 364
           EM
Sbjct: 427 EM 428



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/343 (20%), Positives = 147/343 (42%), Gaps = 57/343 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG    ++++N L+   +++        +   +      PN AT   +I  LC  G+
Sbjct: 463 MKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGK 522

Query: 74  ---------------LQTYVDMLD------------RIHGKRCSPMVIVNTSLILRIIQ- 105
                          L+ Y  M+D             +  +     ++V      +++  
Sbjct: 523 VKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSS 582

Query: 106 ---EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
              E   ++ ++LL+RML  ++  + I Y  ++ A  +  +++ A +V++ +++RG + +
Sbjct: 583 LCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPD 642

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK-RIEESLSYC 221
              YT  I  YC    + EA  +  +M+  G+KP   T+ ++++G +K   ++  SL + 
Sbjct: 643 VITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFS 702

Query: 222 EQMMSRKL--LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           +     K+   P  S   EM                       G  P+ + Y+ LI  + 
Sbjct: 703 KGSEEEKMDASPFWSEMKEM-----------------------GIKPDVVCYTVLIDSHC 739

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           K   +Q+ + LY EM  + + P +  YT+L+SS C  G ++ A
Sbjct: 740 KTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRA 782



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 106/237 (44%), Gaps = 15/237 (6%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+S+LC  G+    + +L+R+      P  I+   LI    ++  ++   ++   ++ + 
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 638

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY------- 176
           +  D I Y++++    ++  L  A  ++ +M +RG   +   YT  +  + +        
Sbjct: 639 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARS 698

Query: 177 -----GKIEE---ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
                G  EE   A+    EM+  G+KP    + +LI+   K   ++++++  ++M++R 
Sbjct: 699 LQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARG 758

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           L P    +  ++   C  G+  +A  ++     KG  P+    S L  G  K  ++Q
Sbjct: 759 LQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 84/186 (45%), Gaps = 15/186 (8%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---- 100
           ++  ++E    P+  T   +I+  C+   L+   D+ + +  +   P VI  T ++    
Sbjct: 630 VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHS 689

Query: 101 ------LRIIQ-----EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
                  R +Q     EE   +       M    +  D + Y++++ +  K  NL+ A+ 
Sbjct: 690 KVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAIN 749

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +Y+EM+ RG   +   YT  + + C  G ++ A  L+ EM   G++P     ++L  G  
Sbjct: 750 LYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGIL 809

Query: 210 KAKRIE 215
           KA++++
Sbjct: 810 KARKVQ 815


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/402 (22%), Positives = 183/402 (45%), Gaps = 37/402 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATIRTLI 65
            F V   + +RG+    I+F TLI  +    + +     +  +L + I++ ++ +  TLI
Sbjct: 113 GFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKF-DQVSYGTLI 171

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + +CK G  +  + ++ +I G+   P V +  ++I  + + + + E   L   M  K + 
Sbjct: 172 NGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS 231

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ ++Y       L+ A+ +  EM+ +  + N + Y   + A C+ GK++EA  +
Sbjct: 232 ADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNV 291

Query: 186 MQEMENA-----------------------------------GLKPYDETFNLLIEGCAK 210
           +  M  A                                   G+ P   ++ +LI G  K
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCK 351

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
            K ++E+L+  ++M  + ++P    ++ +I  LC+ G       ++    D+G   N IT
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVIT 411

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI G  K G +   + L+ +M+ + I P    +T L+  LC+ G+L++A + F+ + 
Sbjct: 412 YNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLL 471

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +      V  Y  ++  H ++G   +AL +  +M   G  P+
Sbjct: 472 TKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPN 513



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 154/314 (49%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T+  LI+  C  GQ+     +L +I  +   P  I  T+LI  +  + ++ + +  
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHF 151

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             ++L + +  D ++Y  ++    K+ +   A+ +  ++  R    N  +Y T I A C+
Sbjct: 152 HDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCK 211

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           Y  + EA  L  EM   G+     T+  LI G   A +++E++    +M+ + + P+   
Sbjct: 212 YQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYT 271

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N ++  LC+ G  K+A  +L + L     P+ ITYS L+ GY    E+++   ++  M 
Sbjct: 272 YNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMS 331

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              ++P + +YT LI+  C+   ++EA   FK M   ++VPG+  Y SL+    + G  +
Sbjct: 332 LMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391

Query: 356 KALHLCEEMVSEGL 369
               L +EM   G+
Sbjct: 392 YVWDLIDEMRDRGI 405



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 164/363 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++ R    ++  +NT+I  + K       + ++  M       +  T  TLI 
Sbjct: 183 AIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIY 242

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C   +L+  + +L+ +  K  +P V     L+  + +E +++E   +L  ML+  +  
Sbjct: 243 GFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKP 302

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I YS ++     +  L+ A  V+  M   G + +   YT  I  +C+   ++EA  L 
Sbjct: 303 DVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLF 362

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM    + P   T++ LI+G  K+ RI       ++M  R +  +   +N +I  LC+ 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKN 422

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +     D+G  P   T++ L+ G  K G +++  + + ++  K     +  Y
Sbjct: 423 GHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKY 482

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I+  C+ G LEEA      M+ +  VP    ++ ++    +K    KA  L  +M+ 
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMIC 542

Query: 367 EGL 369
            GL
Sbjct: 543 RGL 545



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 134/296 (45%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V   +R+   R +P +I    ++    + +     + L  R+  K +  D I  ++++  
Sbjct: 44  VSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINC 103

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              M  +     V  ++LKRG+  ++  +TT I   C  G++ +A     ++   G+K  
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFD 163

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++  LI G  K      ++    ++  R   P+   +N +I  LC+     +A G+ +
Sbjct: 164 QVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFS 223

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               KG S + +TY+ LI G+    +++E + L  EM  K+I+P +  Y  L+ +LC+ G
Sbjct: 224 EMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K++EA     +M    + P V  Y +L+  +       KA H+   M   G+ P  
Sbjct: 284 KVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 101/233 (43%)

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
           ++N++ A+  +  ML    +     +   + ++ +      A  L   +E  G++P   T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N+LI       +I    S   +++ R   P    F  +I+ LC  G   +A       L
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G   ++++Y  LI G  K G+ +  +KL  +++ +   P +  Y ++I +LC+   + 
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 216

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           EA   F  M +  +   V  Y +L+          +A+ L  EMV + + P+ 
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNV 269


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 161/352 (45%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF L  +++ TLI+ + K       + +   M   +  PN      ++  LCK G +  
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE 236

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+   + G+   P V   T LI       +  E   LL  M+ +N+  +   Y++++ 
Sbjct: 237 ARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILID 296

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   L  A  +   M++RG   +   + T +  YC Y  + EA  L       G+ P
Sbjct: 297 ALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITP 356

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N+LI G  K  RI+E+LS   +M  +KL P+   ++ +I  LC+ G    A  + 
Sbjct: 357 DVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELF 416

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
           +   D G SPN ITY+ ++    K   + + ++L+  M  + ++P + +Y  LI+  C+ 
Sbjct: 417 SAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKS 476

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            +++EA   F+ M   +LVP    Y  L+    + G  + A  L   M   G
Sbjct: 477 KRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 165/372 (44%), Gaps = 1/372 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + +RG+ L+ I+  T++  +  +         +  ++      +E T  TLI+
Sbjct: 132 AFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLIN 191

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G  +   ++L ++ G+   P V++   ++  + ++  + E   L   ++ + +  
Sbjct: 192 GLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDP 251

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ +++    +        +  +M+ R  + N + Y   I A C+ G + +A+ + 
Sbjct: 252 DVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMR 311

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G +P   TFN L+ G      + E+    +      + P   ++N +I   C+ 
Sbjct: 312 NLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKN 371

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +      K  +PN +TYS LI G  K G I    +L+  +     SP +  Y
Sbjct: 372 NRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITY 431

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             ++ +LC+   +++A + F +M    L P V  Y  L+  + +     +A++L EEM  
Sbjct: 432 NIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHR 491

Query: 367 EGLKP-STSYLC 377
             L P S +Y C
Sbjct: 492 RNLVPDSVTYNC 503



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 3/273 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            R  +L++ ++N LI  + K         +   M+E  + P+  T  TL+S  C    + 
Sbjct: 281 DRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVV 340

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               + D       +P V     LI+   +  RI+E + L  +M  K +  + + YS ++
Sbjct: 341 EARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLI 400

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   +  A  ++  +   G S N   Y   + A C+   +++A  L   M   GL 
Sbjct: 401 DGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLT 460

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   ++N+LI G  K+KRI+E+++  E+M  R L+P    +N +I  LC+ G    A  +
Sbjct: 461 PNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWEL 520

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             +  D G   + ITY+ L   ++K   IQ V+
Sbjct: 521 FNVMHDGGPPVDVITYNILFDAFSK---IQHVI 550



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/374 (20%), Positives = 154/374 (41%), Gaps = 37/374 (9%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M+ +  A  + + +  RG + S+++ + LI+           + +   +L+     N  T
Sbjct: 91  MKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAIT 150

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + T++  LC  G+++  ++  D +                        + +G +L     
Sbjct: 151 LTTIMKGLCINGEVRKALEFHDSV------------------------VAQGFLL----- 181

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                 D + Y  ++    K+     A  +  +M  +    N  +Y   +   C+ G + 
Sbjct: 182 ------DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           EA  L  ++   G+ P   T+  LI G C   +  E +   C+ M+ R +  +   +N +
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCD-MVDRNVNLNVYTYNIL 294

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+ G   +A+ M  L +++G  P+ +T++ L+ GY    ++ E  KL+       I
Sbjct: 295 IDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI 354

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P + +Y  LI   C+  +++EA   F  M    L P +  Y SL+    + G  + A  
Sbjct: 355 TPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWE 414

Query: 360 LCEEMVSEGLKPST 373
           L   +   G  P+ 
Sbjct: 415 LFSAIHDGGPSPNV 428



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 123/266 (46%)

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           + I++ + L  R++  + +   + +++I+ + VKM++  +A+ + ++M  RG + +    
Sbjct: 57  DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           +  I  YC  G +  A  ++  +   G +    T   +++G      + ++L + + +++
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           +  L     +  +I  LC+ G  ++A  +L     +   PN + Y+ ++ G  K+G + E
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE 236

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              LY ++  + I P +  YT LI   C  G+  E  +    M   ++   V  Y  L+ 
Sbjct: 237 ARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILID 296

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              +KG   KA  +   M+  G +P 
Sbjct: 297 ALCKKGMLGKAHDMRNLMIERGQRPD 322



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 126/283 (44%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+    ++  I++ +     + L K+M  + +    +  S+++     + ++  A  V
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
              +LKRG+  N+   TT +   C  G++ +A      +   G    + T+  LI G  K
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
                E+     +M  + + P+   +N ++  LC+ G   +A  + +  + +G  P+  T
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI G+   G+ +EV +L  +M  ++++  +  Y  LI +LC+ G L +A     +M 
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                P +  + +L+  +    +  +A  L +     G+ P  
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 1/203 (0%)

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
           +  I++A  L   +      P    FN+++    K K    ++S  +QM  R + PS   
Sbjct: 56  FDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVT 115

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
            + +I   C  G+   A  +L + L +G+  N IT + ++ G    GE+++ L+ +  + 
Sbjct: 116 LSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVV 175

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            +        Y +LI+ LC+ G   EA +    M+   + P V IY  +V    + G   
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235

Query: 356 KALHLCEEMVSEGLKPST-SYLC 377
           +A  L  ++V  G+ P   +Y C
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTC 258



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 28/138 (20%), Positives = 62/138 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +   G S ++I++N ++  + K    D    ++  M E    PN ++   LI+
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK  ++   +++ + +H +   P  +    LI  + +  RI     L   M       
Sbjct: 472 GYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPV 531

Query: 127 DTIAYSLIVYAKVKMRNL 144
           D I Y+++  A  K++++
Sbjct: 532 DVITYNILFDAFSKIQHV 549



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 44/85 (51%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++L + A ++   + +RG + ++ S+N LI+   KS R D    +++ M      P+  T
Sbjct: 441 IQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVT 500

Query: 61  IRTLISALCKGGQLQTYVDMLDRIH 85
              LI  LCK G++    ++ + +H
Sbjct: 501 YNCLIDGLCKSGRISHAWELFNVMH 525


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 166/360 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G   ++ +F   I V+ ++ + +  + I + M +    P+  T   LI ALC   +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    ++ +++   R  P  +   +L+ R      ++        M +   + D + +++
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V A  K  N   A    + M  +G   N   Y T I       ++++A  L   ME+ G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP   T+ + I+   K+     +L   E+M ++ + P+  A N  +  L + G  ++A 
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     D G  P+ +TY+ ++  Y+K GEI E +KL  EM      P +    SLI++L
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            +  +++EA K F  MK   L P V  Y +L+    + G   +A+ L E MV +G  P+T
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 149/321 (46%), Gaps = 2/321 (0%)

Query: 56   PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
            P   T   LI  L +   ++   D+  ++    C P V     L+    +  +I+E   L
Sbjct: 783  PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842

Query: 116  LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML-KRGFSANSFVYTTFIGAYC 174
             K M       +TI +++++   VK  N++ AL +Y +++  R FS  +  Y   I    
Sbjct: 843  YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902

Query: 175  EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
            + G++ EA  L + M + G +P    +N+LI G  KA   + + +  ++M+   + P   
Sbjct: 903  KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962

Query: 235  AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             ++ ++  LC  G   +         + G +P+ + Y+ +I G  K   ++E L L+ EM
Sbjct: 963  TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022

Query: 295  EY-KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
            +  + I+P L  Y SLI +L   G +EEA K +  ++   L P V  + +L+  +   G 
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082

Query: 354  KAKALHLCEEMVSEGLKPSTS 374
               A  + + MV+ G  P+T 
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTG 1103



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/390 (21%), Positives = 173/390 (44%), Gaps = 10/390 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  AFD    +  +G   +L ++NTLI  + +  R D    ++ +M      P   T   
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I    K G   + ++  +++  K  +P ++   + +  + +  R  E   +   +    
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D++ Y++++    K+  ++ A+ +  EM++ G   +  V  + I    +  +++EA 
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M+   LKP   T+N L+ G  K  +I+E++   E M+ +   P+   FN +   L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+      A  ML   +D G  P+  TY+ +I G  K G+++E +  +++M+ K + P  
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 677

Query: 304 PAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
               +L+  + +   +E+A K     + + +  P    +E L+G  L +     A+   E
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737

Query: 363 EMVSEG--------LKPSTSYLCSASTCRG 384
            +V+ G        L P   Y C  +   G
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSG 767



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 155/343 (45%), Gaps = 4/343 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ TL+   + +   D V + +  M ++   P+  T   L+ ALCK G      D LD 
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV--KM 141
           +  +   P +    +LI  +++  R+++ + L   M  +++     AY+ IV+     K 
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM--ESLGVKPTAYTYIVFIDYYGKS 446

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +  SAL  +E+M  +G + N       + +  + G+  EA  +   +++ GL P   T+
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++  +K   I+E++    +MM     P     N +I  L +     +A  M     +
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
               P  +TY+ L+ G  K G+IQE ++L+  M  K   P    + +L   LC+  ++  
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A K    M     VP V  Y +++   ++ G   +A+    +M
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 146/343 (42%), Gaps = 35/343 (10%)

Query: 3    LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
            + E+A DV   ++  G    + ++N L+    KS + D ++ +Y+ M  +    N  T  
Sbjct: 800  MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859

Query: 63   TLISALCKGGQLQTYVDML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +IS L K G +   +D+  D +  +  SP       LI  + +  R+ E   L + ML 
Sbjct: 860  IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919

Query: 122  KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                 +   Y++++    K    ++A  +++ M+K G   +   Y+  +   C  G+++E
Sbjct: 920  YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979

Query: 182  ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
                 +E++ +GL P    +NL+I G  K+ R+EE+L                 FNEM  
Sbjct: 980  GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL---------------FNEM-- 1022

Query: 242  RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                                +G +P+  TY+ LI      G ++E  K+Y E++   + P
Sbjct: 1023 -----------------KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065

Query: 302  TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
             +  + +LI      GK E A   ++ M +    P    YE L
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 91/391 (23%), Positives = 167/391 (42%), Gaps = 41/391 (10%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ-TYVDM 80
             + ++NT+I  + K+ +       + H ++ + YP+  T+ TL+  + K   ++  Y  +
Sbjct: 642  DVFTYNTIIFGLVKNGQVKEAMCFF-HQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700

Query: 81   LDRIHGKRCSPMVIVNTSLILRIIQEERIE----------------EGMVLLKRMLRKNM 124
             + ++     P  +    LI  I+ E  I+                +G  +L  ++R + 
Sbjct: 701  TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760

Query: 125  IHDTIA---------------------YSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
             H+ ++                     Y+L++   ++   +E A  V+ ++   G   + 
Sbjct: 761  KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820

Query: 164  FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS-YCE 222
              Y   + AY + GKI+E   L +EM     +    T N++I G  KA  ++++L  Y +
Sbjct: 821  ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880

Query: 223  QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
             M  R   P+   +  +I  L + G   +A  +    LD G  PN   Y+ LI G+ K G
Sbjct: 881  LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940

Query: 283  EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            E      L+  M  + + P L  Y+ L+  LC  G+++E   YFK +K   L P V  Y 
Sbjct: 941  EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000

Query: 343  SLVGIHLEKGNKAKALHLCEEM-VSEGLKPS 372
             ++    +     +AL L  EM  S G+ P 
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 157/397 (39%), Gaps = 72/397 (18%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCK 70
           R + + GF L+  S+N LIH++ KS        +Y+ M LE  R                
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR---------------- 220

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
              LQTY                   +SL++ + +   I+  M LLK M    +  +   
Sbjct: 221 -PSLQTY-------------------SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +++ +    +   +  A  + + M   G   +   YT  I A C   K++ A  + ++M+
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
               KP   T+  L++  +  + ++    +  +M     +P    F  ++  LC+ GN  
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGG--------------------------------- 277
           +A   L +  D+G  PN  TY+ LI G                                 
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440

Query: 278 --YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
             Y K G+    L+ + +M+ K I+P + A  + + SL + G+  EA + F  +K   LV
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           P    Y  ++  + + G   +A+ L  EM+  G +P 
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 1/230 (0%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
            +  R FS +  ++  LI  ++KS R     ++++ ML+    PN A    LI+   K G+
Sbjct: 882  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941

Query: 74   LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                  +  R+  +   P +   + L+  +    R++EG+   K +    +  D + Y+L
Sbjct: 942  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001

Query: 134  IVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I+    K   LE ALV++ EM   RG + + + Y + I      G +EEA  +  E++ A
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061

Query: 193  GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            GL+P   TFN LI G + + + E + +  + M++    P+   + ++  R
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 121/302 (40%), Gaps = 35/302 (11%)

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           + ++EE   +   M ++ +  DT  Y  I  +      L+ A     +M + GF  N++ 
Sbjct: 131 DGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   I    +     EA  + + M   G +P  +T++ L+ G  K + I+  +   ++M 
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG-------- 277
           +  L P+   F   IR L   G   +A  +L    D+G  P+ +TY+ LI          
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310

Query: 278 ---------------------------YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
                                      ++   ++  V + + EME     P +  +T L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            +LC+ G   EA     +M+   ++P +  Y +L+   L       AL L   M S G+K
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430

Query: 371 PS 372
           P+
Sbjct: 431 PT 432



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 106/250 (42%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N++H T   + ++ A      LE    V++ M KR    ++  Y T   +    G +++A
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA 172

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
              +++M   G      ++N LI    K++   E++    +M+     PS   ++ ++  
Sbjct: 173 PYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG 232

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L +  +     G+L      G  PN  T++  I    + G+I E  ++   M+ +   P 
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT LI +LC   KL+ A + F+ MK+    P    Y +L+    +  +         
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352

Query: 363 EMVSEGLKPS 372
           EM  +G  P 
Sbjct: 353 EMEKDGHVPD 362


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 166/355 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+   +++ N+L++     +R      +   M+E    P+  T  TLI  L    +    
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V ++DR+  + C P ++   +++  + +    +  + LL +M    +  + + YS ++ +
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R+ + AL ++ EM  +G   N   Y++ I   C YG+  +A+ L+ +M    + P 
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             TF+ LI+   K  ++ ++    E+M+ R + P+   ++ +I   C      +A  ML 
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           L + K   PN +TY+ LI G+ K   + + ++L+ EM  + +      YT+LI    Q  
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             + A   FK M S  + P +  Y  L+    + G  AKA+ + E +    ++P 
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 176/375 (46%), Gaps = 6/375 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F++       +E  G S +L ++N LI+   +  R  L   +   M++    P+  T
Sbjct: 91  MNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + +L++  C G ++   V ++D++      P  +  T+LI  +    +  E + L+ RM+
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           ++    D + Y  +V    K  + + AL +  +M      AN  +Y+T I + C+Y   +
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L  EMEN G++P   T++ LI       R  ++      M+ RK+ P+   F+ +I
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA---KEGEIQEVLKLYYEMEYK 297
               + G   +A  +    + +   PN  TYS LI G+    + GE +++L+L   M  K
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL---MIRK 387

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
              P +  Y +LI+  C+  ++++  + F+ M    LV     Y +L+    +  +   A
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447

Query: 358 LHLCEEMVSEGLKPS 372
             + ++MVS G+ P+
Sbjct: 448 QMVFKQMVSVGVHPN 462



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 144/311 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG    L+++  +++ + K    DL   +   M       N     T+I +LCK     
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +++   +  K   P VI  +SLI  +    R  +   LL  M+ + +  + + +S ++
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A VK   L  A  +YEEM+KR    N F Y++ I  +C   ++ EA  +++ M      
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI G  KAKR+++ +    +M  R L+ +   +  +I    +  +   A  +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               +  G  PN +TY+ L+ G  K G++ + + ++  ++  ++ P +  Y  +I  +C+
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510

Query: 316 CGKLEEADKYF 326
            GK +    YF
Sbjct: 511 AGKWKMGGIYF 521



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 4/318 (1%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           Y     +RT +S +    +L   + +   +   R  P +I  + L+  I +  + +  + 
Sbjct: 44  YDYREVLRTGLSDI----ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS 99

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
             ++M    + H+   Y++++    +   L  AL +  +M+K G+  +     + +  +C
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
              +I +A  L+ +M   G KP   TF  LI G     +  E+++  ++M+ R   P   
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 219

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +  ++  LC+ G+   A  +L          N + YS +I    K     + L L+ EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
           E K + P +  Y+SLIS LC  G+  +A +    M    + P +  + +L+   ++KG  
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339

Query: 355 AKALHLCEEMVSEGLKPS 372
            KA  L EEM+   + P+
Sbjct: 340 VKAEKLYEEMIKRSIDPN 357



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 119/246 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E +G   ++I++++LI  +    R     R+   M+E    PN  T   LI 
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A  K G+L     + + +  +   P +   +SLI      +R+ E   +L+ M+RK+ + 
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K + ++  + ++ EM +RG   N+  YTT I  + +    + A  + 
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M + G+ P   T+N+L++G  K  ++ +++   E +    + P    +N MI  +C+ 
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511

Query: 247 GNAKQA 252
           G  K  
Sbjct: 512 GKWKMG 517



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 35/265 (13%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A+ + ++M++ G+  ++  +TT I     + K  EA  L+  M   G +P   T+  
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++ G  K    + +L+   +M + K+  +   ++ +I  LC+  +   A  + T   +KG
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283

Query: 264 FSPNEITYSHLIG-----------------------------------GYAKEGEIQEVL 288
             PN ITYS LI                                     + K+G++ +  
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           KLY EM  +SI P +  Y+SLI+  C   +L EA +  ++M     +P V  Y +L+   
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403

Query: 349 LEKGNKAKALHLCEEMVSEGLKPST 373
            +     K + L  EM   GL  +T
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNT 428



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 35/279 (12%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           + +  +++ + L   M +       I +S ++ A  KM   +  +   E+M   G S N 
Sbjct: 54  LSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL 113

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           + Y   I  +C   ++  A  L+ +M   G +P   T N L+ G     RI ++++  +Q
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M                                   ++ G+ P+ +T++ LI G     +
Sbjct: 174 M-----------------------------------VEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
             E + L   M  +   P L  Y ++++ LC+ G  + A      M++  +   V IY +
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
           ++    +  ++  AL+L  EM ++G++P+     S  +C
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+  LE   YP       
Sbjct: 101 FRVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEESLE-CGYPASLYFFN 144

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+ + CK G+++    + D I      P V+                            
Sbjct: 145 ILMHSFCKEGEIRLAQSVFDAITKWGLRPSVV---------------------------- 176

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +++ ++   +K+ +L     + + M   G   + + Y+  I   C+  K+++ 
Sbjct: 177 -------SFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDX 229

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM + GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 230 NELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYG 289

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA  ++     KG  P++ITY+ LI G  KEG+++   +    M  ++I   
Sbjct: 290 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLD 349

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P +  Y  ++    +KG+      L +
Sbjct: 350 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMK 409

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 410 EMQRDGYVPS 419



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 129/277 (46%), Gaps = 3/277 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    +  +R+ + M  +   P+  T
Sbjct: 156 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYT 212

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 213 YSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 272

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D + Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 273 SQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 332

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A      M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 333 TAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 392

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              C+ G+    + ++      G+ P+ +TY+ L+ G
Sbjct: 393 NEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 22  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGIITAYL 81

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 82  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 140

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++   C+ G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 141 YFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKA 200

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++ ++ F  M    LVP    + +L+  H + G 
Sbjct: 201 MQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGR 260

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 261 VDLAMEIYKQMLSQSLSPD 279


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 170/371 (45%), Gaps = 40/371 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++A  + R + + G   +++ +N LI  ++ S+R +  + + + M  +   P + T  +
Sbjct: 433 LDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNS 492

Query: 64  LISALCKGGQLQTYVDMLD--RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           +   LC+   +   +DM+   R+HG    P +   T L+ ++ + +R  E    L  M+R
Sbjct: 493 IFGCLCRREDVTGALDMVREMRVHGHE--PWIKHYTLLVKQLCKRKRSAEACNFLAEMVR 550

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +  + D +AYS  +   VK++ ++ AL ++ ++  RG+  +   Y T             
Sbjct: 551 EGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNT------------- 597

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
                                 LI G  K KR+ E+    ++M+++ L+PS   +N +I 
Sbjct: 598 ----------------------LINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID 635

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G+  QA   L+  + K   PN ITY+ LI G    G   + + L+ EM  K  SP
Sbjct: 636 GWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSP 695

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              ++ +LI  LC+CG  + A  YF+ M      P   +Y +L+   +   N   A  + 
Sbjct: 696 NRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFISNKNPTLAFEIL 754

Query: 362 EEMVSEGLKPS 372
           +EMV++G  P 
Sbjct: 755 KEMVAKGKFPD 765



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/417 (21%), Positives = 178/417 (42%), Gaps = 51/417 (12%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +E  G  L+  +F  LIH   +  R D   ++++ M ++   P+ +    LI 
Sbjct: 247 AFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIG 306

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---------LRIIQEERIE----EGM 113
            LC   +++  + +L  +      P + + + LI          R+I EER+E    E M
Sbjct: 307 GLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLI-EERLEDLDTEAM 365

Query: 114 VLL------------------------------------KRMLRKNMIHD-TIAYSLIVY 136
           +LL                                    K  + K M+   T ++S+++ 
Sbjct: 366 LLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVID 425

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  L+ AL ++ +M++ G   N  +Y   I       ++EE   L++EM+ +G +P
Sbjct: 426 GLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRP 485

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T N +     + + +  +L    +M      P    +  ++++LC+   + +A   L
Sbjct: 486 TQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFL 545

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              + +GF P+ + YS  I G+ K   + + L+++ ++  +   P + AY +LI+  C+ 
Sbjct: 546 AEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKV 605

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++ EA      M +  LVP V  Y  L+    + G+  +A H    MV +  +P+ 
Sbjct: 606 KRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNV 662



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 125/288 (43%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M++ +  P   +   +I  LC  G+L   + +   +    C   V++  +LI ++    R
Sbjct: 408 MVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 467

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +EE  +LLK M           ++ I     +  ++  AL +  EM   G       YT 
Sbjct: 468 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTL 527

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +   C+  +  EA   + EM   G  P    ++  I+G  K K ++++L     + +R 
Sbjct: 528 LVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARG 587

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P   A+N +I   C+     +A+ +L   + KG  P+ +TY+ LI G+ K G+I +  
Sbjct: 588 YCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAF 647

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
                M  K   P +  YT+LI  LC  G+ ++A   +  M+     P
Sbjct: 648 HCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSP 695



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/389 (21%), Positives = 163/389 (41%), Gaps = 50/389 (12%)

Query: 33  VTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPM 92
           ++KS   DLV    + M ++   P++ T+ +++ A C   +    + + + I+G+     
Sbjct: 169 ISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDG 228

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
            +++  L+L   +   +++   L++RM    +  +   + ++++  V+   ++ AL +++
Sbjct: 229 HVLSI-LVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFK 287

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA- 211
           +M K GF+ +  VY   IG  C   +IE+A  L+ EM+  G+ P  +  + LI  C++  
Sbjct: 288 KMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEV 347

Query: 212 ---KRIEESL--------------------------------------SYCEQ------- 223
              + IEE L                                      +Y +        
Sbjct: 348 DIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFF 407

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   + P  ++F+ +I  LC  G    A  +    +  G   N + Y++LI   +    
Sbjct: 408 MVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 467

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           ++E   L  EM+     PT   + S+   LC+   +  A    + M+ H   P +  Y  
Sbjct: 468 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTL 527

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LV    ++   A+A +   EMV EG  P 
Sbjct: 528 LVKQLCKRKRSAEACNFLAEMVREGFLPD 556



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 1/196 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++  + A ++ R +  RG+   ++++NTLI+   K  R      I   M+     P+  T
Sbjct: 570 IKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVT 629

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI   CK G +      L R+ GK   P VI  T+LI  +    R ++ + L   M 
Sbjct: 630 YNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMR 689

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    + I++  +++   K    ++AL+ + EM +R  + ++ VY   I ++       
Sbjct: 690 GKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFISNKNPT 748

Query: 181 EANCLMQEMENAGLKP 196
            A  +++EM   G  P
Sbjct: 749 LAFEILKEMVAKGKFP 764



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 36/207 (17%)

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           +GA  + G I+     ++EM ++G +P   T   +++    +++ +++LS   ++  R  
Sbjct: 166 LGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGW 225

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           +      + ++    +CG   +A  ++    D G   NE T+  LI G+ ++  + + L+
Sbjct: 226 VDG-HVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQ 284

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L                                   FK M+     P V +Y++L+G   
Sbjct: 285 L-----------------------------------FKKMQKSGFAPDVSVYDALIGGLC 309

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTSYL 376
            K    KALHL  EM   G+ P    L
Sbjct: 310 AKKEIEKALHLLSEMKELGIDPDIQIL 336


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 145/301 (48%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +   + + + G+  SL  FN L+H   K     L   ++  + +    P+  +
Sbjct: 114 LKYFKLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVS 173

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI+   + G L     +   +H     P V  NT LI  + +E +++E   L   ML
Sbjct: 174 FNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEML 233

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ AL +Y++ML++G+S +   Y T I   C  G ++
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLK 293

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L+ EM   GLKP   T+  LI+G  K   +E +    ++M+   +     A+  +I
Sbjct: 294 QARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALI 353

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G A  A  ML   L  G  P   TY+ +I G+ K+G+++   KL  EM+     
Sbjct: 354 SGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHV 413

Query: 301 P 301
           P
Sbjct: 414 P 414



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 158/369 (42%), Gaps = 52/369 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 97  FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYKEILE-CGYPTSLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G+++    + D I      P V+                            
Sbjct: 141 ILMHRFCKEGEIRLAQSVFDAITKCGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +++ ++   +++ +L+    +   M   G   + +  T  I   C+  K++EA
Sbjct: 173 -------SFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM + GL P   TF  LI+G  K+ R++ +L   +QM+ +   P    +N +I  
Sbjct: 226 NELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G+ KQA  ++     KG  P++ITY+ LI G  KEG+++   +L   M  +SI   
Sbjct: 286 LCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    ++G+   A  L +
Sbjct: 346 DVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLK 405

Query: 363 EMVSEGLKP 371
           EM  +G  P
Sbjct: 406 EMQRDGHVP 414



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
            MIH    +  I+ AK      V  +  +SA  V+  +L  K    ++ +V++  I AY 
Sbjct: 18  TMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     ++    P+D T   ++E   K K  +    + ++++      S 
Sbjct: 78  ESGFLRDAIECFRLTRKHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYKEILECGYPTSL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G  + A  +       G  P+ ++++ LI GY + G++ +  +L   
Sbjct: 137 YFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +   T LI+ LC+  K++EA++ F  M    LVP    + +L+  H + G 
Sbjct: 197 MHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              AL + ++M+ +G  P 
Sbjct: 257 VDLALEIYKQMLRQGYSPD 275


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 162/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G   +++++N +IH + K ++ +     +  M      P+  T  +L++  CK G 
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+  + +L  +     +P V+   +LI    +   + E   L + M+ +    D   Y++
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+RNL  A   ++EML +G   + F Y T I A         A  L + M   G
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N++I+G  K   ++++     +M+S  L P C  +  +I   CE G  ++A 
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   +  G  P+ +TY+ L+    + G +      + +M    I P    Y  LI +L
Sbjct: 574 KLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 633

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G+   A ++F  M    L P    Y  L+  +  +GN A A+ L  EM   G+ P 
Sbjct: 634 CMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 692



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 168/358 (46%), Gaps = 7/358 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA---TIRTLISALCKGGQL 74
           GFSL+ ++FN +I  + +    +   +    +++++R   +A   T   LI+AL + G +
Sbjct: 269 GFSLNDVTFNVVISFLAREGHLENAVK----LVDSMRLSKKASSFTYNPLITALLERGFV 324

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +    +   +  +   P V+   ++I  +++ E+ E   V    M    ++ D I Y+ +
Sbjct: 325 RKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSL 384

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K  NL+ AL +  ++ + G +     Y T I  YC  G + EA  L +EM   G 
Sbjct: 385 LNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGC 444

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+ +L+ G  K + +  +  + ++M+S+ L P C A+N  I       +   A  
Sbjct: 445 FPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQ 504

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +  + + KG  P+ +TY+ +I G  K G +++  +L  +M    + P    YT LI + C
Sbjct: 505 LREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHC 564

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + G L EA K    M S  L P V  Y  LV     +GN   A     +M+  G++P+
Sbjct: 565 ERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPN 622



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 3/288 (1%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--MIHDTIAYSLIVYAKVKMRNLE 145
           R  P ++   +L+   ++E R +E  +LLK M  +      + + +++++    +  +LE
Sbjct: 232 RVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLE 291

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A+ + + M +    A+SF Y   I A  E G + +A  L  EMEN G+ P   T+N +I
Sbjct: 292 NAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAII 350

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K ++ E +     +M +  LLP    +N ++ R C+ GN K+A  +L      G +
Sbjct: 351 HGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLA 410

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P  +TY+ LI GY + G++ E  +L  EM  +   P +  YT L++   +   L  A ++
Sbjct: 411 PTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREF 470

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           F  M S  L P    Y + +   L   +   A  L E M+ +G+ P T
Sbjct: 471 FDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDT 518



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 1/314 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + G + +++++NTLI    +        R+ + M+E   +P+  T   L++   K   
Sbjct: 404 LRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRN 463

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    +  D +  K   P      + I   +          L + M+ K +  DT+ Y++
Sbjct: 464 LAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNV 523

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    K  NL+ A  +  +M+  G   +   YT  I A+CE G + EA  L+  M + G
Sbjct: 524 IIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDG 583

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P   T+ +L+  C +   +  +  +  +M+   + P+   +N +I  LC  G    A 
Sbjct: 584 LQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAF 643

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 L++G +PN+ TY+ LI G  +EG   + ++LY+EM    I P    + +L    
Sbjct: 644 RHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703

Query: 314 CQCGKLEEADKYFK 327
            + G +  A +Y +
Sbjct: 704 DE-GHMYHAIEYME 716



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 5/227 (2%)

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN--AGLKPYDETFNLLIE 206
            VY EML+         Y T + ++ + G+ +EA+ L++EME    G    D TFN++I 
Sbjct: 223 AVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVIS 282

Query: 207 GCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
             A+   +E ++   + M +S+K   S   +N +I  L E G  ++A  +     ++G  
Sbjct: 283 FLAREGHLENAVKLVDSMRLSKK--ASSFTYNPLITALLERGFVRKAEALQMEMENEGIM 340

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P  +TY+ +I G  K  + +     + EM    + P +  Y SL++  C+ G L+EA   
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              ++   L P V  Y +L+  +   G+ A+A  L EEMV +G  P 
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPD 447



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 87/202 (43%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +AF +   +  +G     +++N +I  + K+       R+   M+ +   P+  T   LI
Sbjct: 501 MAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLI 560

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A C+ G L+    +L+ +      P V+  T L+    +   +       ++ML   + 
Sbjct: 561 HAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIE 620

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            + I Y+++++A         A   + EML+RG + N + YT  I   C  G   +A  L
Sbjct: 621 PNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRL 680

Query: 186 MQEMENAGLKPYDETFNLLIEG 207
             EM   G+ P   T N L +G
Sbjct: 681 YFEMHQNGIPPDYCTHNALFKG 702



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 3/144 (2%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P     N ++R L +         +    L     P  +TY+ L+  + KEG   E   L
Sbjct: 200 PDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASML 259

Query: 291 YYEMEYKSISPTLP--AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
             EME +    +L    +  +IS L + G LE A K    M+          Y  L+   
Sbjct: 260 LKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSF-TYNPLITAL 318

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
           LE+G   KA  L  EM +EG+ P+
Sbjct: 319 LERGFVRKAEALQMEMENEGIMPT 342


>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Glycine max]
          Length = 572

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 174/373 (46%), Gaps = 2/373 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+++ AF    YL  +G    +     L++ + K ++     R+ + M+ +   P+ A+
Sbjct: 78  LRIYD-AFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAAS 136

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L++ LCK G +   + +++++ G       +   +L+  +     + + + LL R+ 
Sbjct: 137 YTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLT 196

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +K +I +   YS ++ A  K R ++ A+ + ++++ +G   N   Y   +   C+ G+ E
Sbjct: 197 KKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTE 256

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L QE+   G  P   +FN+L+       R EE+     +M      PS   +N +I
Sbjct: 257 EAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILI 316

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L   G  +QA  +L      GF  +  +Y+ +I    KEG++  VLK   +M ++   
Sbjct: 317 TSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCH 376

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y++ IS L + GK++EA    + + S    P  D Y++L+     KGN   A  +
Sbjct: 377 PNEGTYSA-ISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQM 435

Query: 361 CEEMVSEGLKPST 373
             EM   G  P +
Sbjct: 436 LYEMTKYGFTPDS 448



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 157/339 (46%), Gaps = 2/339 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L ++G   +  +++ L+    K    D   ++   ++     PN  +   L++ LCK G+
Sbjct: 195 LTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGR 254

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +  + +   +  K  SP V+    L+  +  E R EE   LL  M +++     + Y++
Sbjct: 255 TEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNI 314

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ +       E A  V +EM + GF A++  Y   I   C+ GK++     + +M +  
Sbjct: 315 LITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRR 374

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P + T++  I   ++  +++E+    + + S++  P    +  +I  LC  GN   A 
Sbjct: 375 CHPNEGTYSA-ISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAF 433

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ML      GF+P+  TYS LI G  +EG + E LK++  +E     P +  Y +LI   
Sbjct: 434 QMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGF 493

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEK 351
           C+  + + + + F +M +   VP  + Y  LV G+  E+
Sbjct: 494 CKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEE 532



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 38/309 (12%)

Query: 70  KGGQLQTYVDML--DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           KG +L+ Y   L  + + GK   P V   T L+  + +  +  + + +++ M+   +I D
Sbjct: 74  KGKELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPD 133

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
             +Y+ +V    K  N+  A+ + E+M   GF  N+  Y T +   C +G + ++  L+ 
Sbjct: 134 AASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLD 193

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            +   GL P   T++ L+E   K + ++E++   + +++                     
Sbjct: 194 RLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIA--------------------- 232

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
                         KG  PN ++Y+ L+ G  KEG  +E +KL+ E+  K  SP++ ++ 
Sbjct: 233 --------------KGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFN 278

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            L+ SLC  G+ EEA++    M      P V  Y  L+      G   +A  + +EM   
Sbjct: 279 ILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRS 338

Query: 368 GLKPS-TSY 375
           G K S TSY
Sbjct: 339 GFKASATSY 347


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 156/324 (48%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           + +Y  M+    YPN  T  +LI   C  GQL+  V +L+ +     +P V     LI  
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           + +E  +++   +L  M+++ +  + + Y+ ++     ++ +  A  V+  +  RG + N
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y+  I   C+   ++EA  L +EM    + P   T++ LI+G  K+ RI +     +
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           ++ +R    +   +N ++  LC+     +A  +LT   D+G  P+  TY+ L+ G  K G
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
            +++  ++Y ++  K     +  YT +I+ LC+ G  +EA      M+ +  +P    YE
Sbjct: 454 RLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYE 513

Query: 343 SLVGIHLEKGNKAKALHLCEEMVS 366
           +L+    +     KA+ L  EM++
Sbjct: 514 TLISALFKNNKNGKAVKLLREMIA 537



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 180/378 (47%), Gaps = 7/378 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M  F++A    + +E +G    + +FN LI+  +   + +  + +   +L+    P+  T
Sbjct: 66  MNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVT 125

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           + TL+  LC  G+++  ++  D +  KR     +   +LI  + +       + LL+++ 
Sbjct: 126 VNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIE 185

Query: 121 RKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
              ++  D I Y+ I+ +  K + +  A  +Y EM+ +    N   + + I  +C  G++
Sbjct: 186 GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQL 245

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA  L+ EM    + P   TFN+LI+G  K   ++++ S    M+ + + P+   +  +
Sbjct: 246 KEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSL 305

Query: 240 IRR---LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           +     + E   AK     ++L   +G +PN  +YS +I G  K   + E +KL+ EM  
Sbjct: 306 MDGYFLVKEVNKAKHVFNTISL---RGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHL 362

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K+++P    Y+SLI  LC+ G++ +       + +      +  Y SL+    +     K
Sbjct: 363 KNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDK 422

Query: 357 ALHLCEEMVSEGLKPSTS 374
           A+ L  +M  EG++P  S
Sbjct: 423 AIALLTKMKDEGIQPDMS 440



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/402 (19%), Positives = 178/402 (44%), Gaps = 36/402 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   + + G+    ++ NTL+  +  + +       + H++    + ++ +  TLI+
Sbjct: 107 AFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLIN 166

Query: 67  ALCKGGQLQTYVDMLDRIHG------------------------------------KRCS 90
            LCK G+ +  + +L +I G                                    K+  
Sbjct: 167 GLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIY 226

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+   SLI       +++E + LL  M   N+  +   +++++    K   ++ A  V
Sbjct: 227 PNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV 286

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
              M+K+G   N   YT+ +  Y    ++ +A  +   +   G+ P   +++++I G  K
Sbjct: 287 LSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK 346

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
            K ++E++   ++M  + + P+   ++ +I  LC+ G       ++    ++G   N IT
Sbjct: 347 NKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIIT 406

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ L+ G  K  ++ + + L  +M+ + I P +  YT+L+  LC+ G+L++A + ++ + 
Sbjct: 407 YNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLL 466

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                  + +Y  ++    ++G   +AL L  +M   G  P 
Sbjct: 467 CKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPD 508



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 144/324 (44%), Gaps = 37/324 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           A+D+   +  +    ++++FN+LI+         + V  + +  L N+  PN  T   LI
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVN-PNVYTFNILI 271

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI--------------------LR--- 102
             LCK G+++    +L  +  +   P V+  TSL+                    LR   
Sbjct: 272 DGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVT 331

Query: 103 ------------IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
                       + + + ++E + L K M  KNM  +T+ YS ++    K   +     +
Sbjct: 332 PNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDL 391

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
            +E+  RG  AN   Y + +   C+  ++++A  L+ +M++ G++P   T+  L++G  K
Sbjct: 392 IDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCK 451

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
             R++++    + ++ +    +   +  MI  LC+ G   +A  +L+   D G  P+ +T
Sbjct: 452 NGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVT 511

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEM 294
           Y  LI    K  +  + +KL  EM
Sbjct: 512 YETLISALFKNNKNGKAVKLLREM 535



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 113/213 (53%), Gaps = 2/213 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQ 75
           RG + ++ S++ +I+ + K+   D   ++++ M L+N+  PN  T  +LI  LCK G++ 
Sbjct: 328 RGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMT-PNTVTYSSLIDGLCKSGRIS 386

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
              D++D I+ +     +I   SL+  + +  ++++ + LL +M  + +  D   Y+ +V
Sbjct: 387 DVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLV 446

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   L+ A  +Y+++L +G+  N  +YT  I   C+ G  +EA  L+ +ME+ G  
Sbjct: 447 DGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCM 506

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           P   T+  LI    K  +  +++    +M++R+
Sbjct: 507 PDAVTYETLISALFKNNKNGKAVKLLREMIARE 539



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/373 (20%), Positives = 158/373 (42%), Gaps = 9/373 (2%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKS---DRNDLVWRIYQHMLE-NIRYPNEATI 61
           + F + RY     F L     N  +H+       D  D     + H+L  N   P     
Sbjct: 1   MTFTILRYATPNSFLL----LNRRLHIQPLPSFIDNLDDAVSSFNHILHMNNHTPPIFEF 56

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             ++S+L K    +  +    ++  K   P +     LI       ++     ++ ++L+
Sbjct: 57  NKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILK 116

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                DT+  + ++        ++ AL  ++ ++++ F  +   Y T I   C+ G+   
Sbjct: 117 LGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRA 176

Query: 182 ANCLMQEMENAGL-KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           A  L++++E   L +P    +  +I+   K K + ++     +M+ +K+ P+   FN +I
Sbjct: 177 ALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLI 236

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C  G  K+A G+L        +PN  T++ LI G  KEGE+++   +   M  + + 
Sbjct: 237 YGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVE 296

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  YTSL+       ++ +A   F  +    + P V  Y  ++    +     +A+ L
Sbjct: 297 PNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKL 356

Query: 361 CEEMVSEGLKPST 373
            +EM  + + P+T
Sbjct: 357 FKEMHLKNMTPNT 369


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 181/416 (43%), Gaps = 73/416 (17%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           +  + A  V   LE  G    LI++N +I    +++R D  +++   M      P+  T 
Sbjct: 106 KTIDKAIQVMHILENHGHP-DLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTY 164

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI +LC  G L + ++  +++  + C P V+  T LI   + +  I+E M LL  ML 
Sbjct: 165 NILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLE 224

Query: 122 KNMIHDTIAYSLIV-----------------------YA------KVKMRNL------ES 146
            N+  D   Y+ I+                       YA       + +R L      E+
Sbjct: 225 INLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEA 284

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP----YD---- 198
              +  +M+ RG  AN   Y+  I + C  GK+EE   L+++M+  GLKP    YD    
Sbjct: 285 GYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIA 344

Query: 199 ------------ETFNLLI-EGCA--------------KAKRIEESLSYCEQMMSRKLLP 231
                       E  +++I +GC               K KR +E+LS  E++      P
Sbjct: 345 ALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSP 404

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           + S++N M   L   G+  +A GM+   LDKG  P+ ITY+ LI    ++G + E ++L 
Sbjct: 405 NASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELL 464

Query: 292 YEMEYKS--ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +ME +S    P++ +Y  ++  LC+  ++ +A +    M      P    Y  L+
Sbjct: 465 VDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLI 520



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/361 (21%), Positives = 163/361 (45%), Gaps = 1/361 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R+L  +G    ++    LIH +  S   D   ++  H+LEN  +P+      +I+  C+ 
Sbjct: 81  RHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQV-MHILENHGHPDLIAYNAIITGFCRA 139

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            ++ +   +LDR+  K  SP ++    LI  +     ++  +    ++L++N     + Y
Sbjct: 140 NRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTY 199

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++ A +    ++ A+ + +EML+     + F Y + I   C  G ++ A  ++  + +
Sbjct: 200 TILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISS 259

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G  P   T+N+L+ G     + E        M++R    +   ++ +I  +C  G  ++
Sbjct: 260 KGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEE 319

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
             G+L     KG  P+   Y  LI    KEG +   +++   M      P +  Y ++++
Sbjct: 320 GVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILA 379

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            LC+  + +EA   F+ +      P    Y S+       G+K +AL +  EM+ +G+ P
Sbjct: 380 CLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDP 439

Query: 372 S 372
            
Sbjct: 440 D 440



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 134/286 (46%), Gaps = 2/286 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF +   +  +G++  +I++N L+  +    + +  + +   M+      N  T   LIS
Sbjct: 250 AFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLIS 309

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ++C+ G+++  V +L  +  K   P       LI  + +E R++  + +L  M+    + 
Sbjct: 310 SVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ I+    K +  + AL ++E++ + G S N+  Y +   A    G    A  ++
Sbjct: 370 DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMI 429

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE--QMMSRKLLPSCSAFNEMIRRLC 244
            EM + G+ P   T+N LI    +   ++E++      +M S +  PS  ++N ++  LC
Sbjct: 430 LEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLC 489

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           +      A  +L   +DKG  PNE TY+ LI G    G + +   L
Sbjct: 490 KVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 1/133 (0%)

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           + R C+ GN  ++   L   ++KG  P+ +  + LI G      I + +++ + +E    
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG- 122

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P L AY ++I+  C+  +++ A +    MK+    P +  Y  L+G    +G    AL 
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182

Query: 360 LCEEMVSEGLKPS 372
              +++ E  KP+
Sbjct: 183 FKNQLLKENCKPT 195



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 84/189 (44%), Gaps = 2/189 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++A +V   +   G    ++++NT++  + K  R D    I++ + E    PN ++  ++
Sbjct: 353 DLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSM 412

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
            SAL   G     + M+  +  K   P  I   SLI  + ++  ++E + LL  M  ++ 
Sbjct: 413 FSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESS 472

Query: 125 --IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                 ++Y++++    K+  +  A+ V   M+ +G   N   YT  I      G + +A
Sbjct: 473 ECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDA 532

Query: 183 NCLMQEMEN 191
             L   + N
Sbjct: 533 RDLATTLVN 541


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 140/283 (49%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
            P  +    ++ R+ + +RI++ +  ++ M  + +  D   Y+ ++    +   +E A +
Sbjct: 6   PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++E+M+K+  + N   Y T I   C+  +IE A  L +EM   G  P + ++N LI+G  
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K K +  +    ++M+    +P+   +  +I  L + G  + A  +L   + KG +PN  
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TYS LI G+ K   + E  KL  +M  + I+PT+  Y  L++SLC+  KLE+A K F+ M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 P V  Y +L+           A  L  EM+++G  P 
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPD 288



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 143/288 (49%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  RG       +N ++  + + ++ +    +++ M++    PN  T  TLI+ LCK  +
Sbjct: 35  MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 94

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++T  ++   + GK   P  +   +LI    +++ +     +  +M+R N + + + Y+ 
Sbjct: 95  IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 154

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   +++A  V + M+K+G + N   Y+  I  +C+  +++EA+ L+++M   G
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 214

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N+L+    +A ++E++      M  R+  P+   +N ++R LC       A+
Sbjct: 215 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 274

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            +    + KG  P+ ITY  L  G  + G++ E  +L  +M+    +P
Sbjct: 275 RLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 151/309 (48%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   ++  LCK  ++   +  ++ +  +   P   +   ++  + QEE++EE  +L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
            ++M+++ +  + + Y+ ++    K   +E+A  +++EM  +G+      Y T I  +C+
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              +  A  +  +M  +   P   T+  LI+G +K+ +++ +    + M+ + + P+ + 
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           ++ +I   C+     +A+ +L   + +G +P  +TY+ L+    +  ++++  KL+  M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            +   PT+  Y +L+ +LC   +L+ A + +  M +    P    Y++L       G   
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 356 KALHLCEEM 364
           +A  L E+M
Sbjct: 307 EAQELMEKM 315



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 145/307 (47%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++  ++  + K+ R D      + M      P+      ++S LC+  +++    + ++
Sbjct: 10  LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 69

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +R +P V+   +LI  + +  RIE    L K M  K  +   ++Y+ ++    K ++
Sbjct: 70  MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 129

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L +A  V+++M++     N   YTT I    + GK++ A  ++  M   G+ P   T++ 
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+G  K +R++E+    EQM+++ + P+   +N ++  LC     + A  +      + 
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P  +TY+ L+       ++    +LY EM  K   P    Y +L   L + GK+ EA 
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309

Query: 324 KYFKIMK 330
           +  + MK
Sbjct: 310 ELMEKMK 316



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 110/218 (50%)

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           + R    ++  Y   +   C+  +I++A   ++EM   G+KP    +N ++ G  + +++
Sbjct: 1   MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           EE+    E+M+ +++ P+   +N +I  LC+    + A  +      KG+ P E++Y+ L
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G+ K+ ++     ++ +M   +  P +  YT+LI  L + GK++ A +    M    +
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            P V  Y  L+    +     +A  L E+MV++G+ P+
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 218



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 4/230 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVW--RIYQHMLENIRYPNEATI 61
            E A+++ + +  +G+  + +S+NTLI    K  + DLV    ++  M+ +   PN  T 
Sbjct: 95  IETAYELFKEMAGKGYVPTEVSYNTLIDGFCK--KKDLVAAKDVFDKMVRSNCVPNVVTY 152

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI  L K G++Q   ++LD +  K  +P V   + LI    +  R++E   LL++M+ 
Sbjct: 153 TTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 212

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +    + Y++++ +  +   LE A  ++  M +R        Y T + A C + +++ 
Sbjct: 213 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDG 272

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
           A+ L  EM   G  P   T++ L  G  +A ++ E+    E+M   K  P
Sbjct: 273 AHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 10/367 (2%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVT----KSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +C  +E RGF   ++   TL  ++T    KS  N  VW  +  + +    PN     ++I
Sbjct: 267 ICEMME-RGF---VVDNATLTLIITAFCEKSLVNRAVW-FFHKVTKMGLSPNLINYSSMI 321

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           S LCK G ++   ++L+ +      P V  +TSLI  + ++   E    L  +++R +  
Sbjct: 322 SGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY 381

Query: 126 HDTI-AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              +  Y+ ++    K   L  A +++E M ++G   N+  YTT I  +C+ G   +A  
Sbjct: 382 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 441

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           LM+ M N G  P   T+N +++G  K  R EE+          ++      +  +I   C
Sbjct: 442 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 501

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  +  QA   L      GF P+   Y+ LI  + ++  +++  KL+ E+    ++PT  
Sbjct: 502 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKE 561

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YTS+I   C+  K+  A K+F+ M  H   P    Y +L+    ++    +A  L + M
Sbjct: 562 TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTM 621

Query: 365 VSEGLKP 371
           + +GL P
Sbjct: 622 IDKGLSP 628



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 1/267 (0%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           +++E + ++  M  + ++  T   + I+    +MR +E A  V++EM  RG   +S  Y 
Sbjct: 189 KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 248

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I  YC  G + EA+  + EM   G    + T  L+I    +   +  ++ +  ++   
Sbjct: 249 YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 308

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            L P+   ++ MI  LC+ G+ KQA  +L   +  G+ PN  T++ LI G  K+G  +  
Sbjct: 309 GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERA 368

Query: 288 LKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            +L+ ++    +  P +  YT++IS  C+  KL  A+  F+ MK   LVP  + Y +L+ 
Sbjct: 369 FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 428

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
            H + GN +KA  L E M +EG  P+T
Sbjct: 429 GHCKAGNFSKAYELMELMSNEGFFPNT 455



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +  +G  L+    N +I V  +    +    ++  M     YP+  T + +I 
Sbjct: 193 AVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIV 252

Query: 67  ALCKGGQL----QTYVDMLDRIHGKRCSPMVIVNTSLILRII---QEERIEEGMVLLKRM 119
             C+ G +    +   +M++R         V+ N +L L I    ++  +   +    ++
Sbjct: 253 GYCRNGNVLEADRWICEMMER-------GFVVDNATLTLIITAFCEKSLVNRAVWFFHKV 305

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            +  +  + I YS ++    K  +++ A  + EEM+K G+  N + +T+ I   C+ G  
Sbjct: 306 TKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWT 365

Query: 180 EEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           E A    ++ + +   KP   T+  +I G  K +++  +    E+M  + L+P+ + +  
Sbjct: 366 ERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTT 425

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C+ GN  +A  ++ L  ++GF PN  TY+ ++ G  K G  +E  KL        
Sbjct: 426 LIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQ 485

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I      YT LIS  C+   + +A  +   M      P + +Y +L+     +     + 
Sbjct: 486 IEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSE 545

Query: 359 HLCEEMVSEGLKPS----TSYLC 377
            L +E++  GL P+    TS +C
Sbjct: 546 KLFDEVIKLGLAPTKETYTSMIC 568



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 168/377 (44%), Gaps = 2/377 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MRL E A +V   +  RG      ++  +I    ++       R    M+E     + AT
Sbjct: 222 MRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNAT 281

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +  +I+A C+   +   V    ++     SP +I  +S+I  + +   +++   LL+ M+
Sbjct: 282 LTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV 341

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKI 179
           +     +   ++ +++   K    E A  ++ ++++   +  N   YT  I  YC+  K+
Sbjct: 342 KNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKL 401

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
             A  L + M+  GL P   T+  LI+G  KA    ++    E M +    P+   +N +
Sbjct: 402 SRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSI 461

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           +  LC+ G A++A  +L          + +TY+ LI    K  ++ + L    +M     
Sbjct: 462 VDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGF 521

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P +  YT+LI++ C+   +++++K F  +    L P  + Y S++  +  +   + A+ 
Sbjct: 522 QPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVK 581

Query: 360 LCEEMVSEGLKP-STSY 375
             ++M   G  P S SY
Sbjct: 582 FFQKMSDHGCAPDSISY 598



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 3/282 (1%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +++ M E    PN  T  TLI   CK G      ++++ +  +   P      S++  + 
Sbjct: 407 LFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLC 466

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +  R EE   LL    +  +  D + Y++++  + K  ++  ALV   +M K GF  +  
Sbjct: 467 KRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIH 526

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           +YTT I A+C    ++++  L  E+   GL P  ET+  +I G  + K++  ++ + ++M
Sbjct: 527 LYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKM 586

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                 P   ++  +I  LC+     +A  +    +DKG SP E+T   L   Y K  + 
Sbjct: 587 SDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDF 646

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
              + +   +  K    T+    +LI  LC   K+  A  +F
Sbjct: 647 ASAMVILERLNKKLWIRTV---HTLIRKLCCEKKVALAALFF 685



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 1/301 (0%)

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
           +  ++    + G+L+  VDM+  +  +       V   +IL   +   +E    +   M 
Sbjct: 177 VECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMS 236

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  D+  Y  I+    +  N+  A     EM++RGF  ++   T  I A+CE   + 
Sbjct: 237 ARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVN 296

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A     ++   GL P    ++ +I G  K   ++++    E+M+     P+      +I
Sbjct: 297 RAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLI 356

Query: 241 RRLCECGNAKQANGM-LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
             LC+ G  ++A  + L L     + PN  TY+ +I GY KE ++     L+  M+ + +
Sbjct: 357 HGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGL 416

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    YT+LI   C+ G   +A +  ++M +    P    Y S+V    ++G   +A  
Sbjct: 417 VPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFK 476

Query: 360 L 360
           L
Sbjct: 477 L 477



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 105/204 (51%), Gaps = 1/204 (0%)

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           +G + E GK++EA  ++ +M N GL       N +I   A+ + +E + +  ++M +R +
Sbjct: 181 VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGV 240

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P    +  +I   C  GN  +A+  +   +++GF  +  T + +I  + ++  +   + 
Sbjct: 241 YPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVW 300

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
            ++++    +SP L  Y+S+IS LC+ G +++A +  + M  +   P V  + SL+    
Sbjct: 301 FFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLC 360

Query: 350 EKGNKAKALHLCEEMV-SEGLKPS 372
           +KG   +A  L  +++ S+  KP+
Sbjct: 361 KKGWTERAFRLFLKLIRSDNYKPN 384



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/228 (18%), Positives = 90/228 (39%), Gaps = 35/228 (15%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A+++   +   GF  +  ++N+++  + K  R +  +++     +N    +  T   
Sbjct: 436 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 495

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LIS  CK   +                                    + +V L +M +  
Sbjct: 496 LISEQCKRADMN-----------------------------------QALVFLNKMFKVG 520

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D   Y+ ++ A  +   ++ +  +++E++K G +     YT+ I  YC   K+  A 
Sbjct: 521 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAV 580

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
              Q+M + G  P   ++  LI G  K  R++E+    + M+ + L P
Sbjct: 581 KFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 125 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 178

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 179 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGV 208

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI G  K  R++ ++ 
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAME 268

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             + M+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ TY+ LI G  
Sbjct: 269 IYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCC 328

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    K    M   +I     AYT+LIS LCQ G+  +A+K  + M S  L P + 
Sbjct: 329 KEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIG 388

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM   G  PS
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPS 421



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 147/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +I + + ++ ++    K   ++ A+ +Y+ ML +    +   Y T I   C+ G ++
Sbjct: 240 VKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 300 QAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHV 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 110/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K+R  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN +   
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y  M  +S+ P L  Y +LI  LC+ G 
Sbjct: 238 MLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+   ++
Sbjct: 298 LKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIR 349



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 24  TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K +  +    + E+++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKLWVPFD-TCRKVLEHLMKLRYFKLVWGFYEEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    L+P    + +L+  H + G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + + M+S+ L P 
Sbjct: 263 VDLAMEIYKXMLSQSLLPD 281


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 158/367 (43%), Gaps = 52/367 (14%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTL 64
           V FD CR + +    L                   LVW  Y+ +LE   YP        L
Sbjct: 99  VPFDTCRKVLEHLMKLKYFK---------------LVWGFYKEILE-CGYPASLYFFNIL 142

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +   CK G++     + D I      P V+   +L+   I+   +++G  L      KN 
Sbjct: 143 MHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKL------KNA 196

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           +H +                             G   + + Y+  I   C+  K+ EAN 
Sbjct: 197 MHAS-----------------------------GVQPDVYTYSVLINGLCKESKMNEAND 227

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM + GL P   TF  LI+G  K  +++ ++   +QM+S+  LP    +N +I  LC
Sbjct: 228 LFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLC 287

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G+ KQA  +L     KG  P++ITY+ LI G  KEG++    +L   M  +SI     
Sbjct: 288 KKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDV 347

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AYT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    +K +   A  L +EM
Sbjct: 348 AYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEM 407

Query: 365 VSEGLKP 371
             +G  P
Sbjct: 408 QRQGHVP 414



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 141/301 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +   + + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 114 LKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVS 173

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     + + +H     P V   + LI  + +E ++ E   L   ML
Sbjct: 174 FNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEML 233

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++SA+  Y++ML + F  +   Y T I   C+ G ++
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLK 293

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L+ EM   GLKP   T+  LI+G  K   ++ +    E M+   +     A+  +I
Sbjct: 294 QAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALI 353

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G A  A  ML   L  G  P+  TY+ +I  + K+ +++   KL  EM+ +   
Sbjct: 354 SGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHV 413

Query: 301 P 301
           P
Sbjct: 414 P 414



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 120/265 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +A  V   + + G   S++SFNTL++   +    D  +++   M  +   P+  T   LI
Sbjct: 154 IAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLI 213

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK  ++    D+ + +  K   P  +  T+LI    +  +++  M   K+ML +  +
Sbjct: 214 NGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFL 273

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G ++ A  L
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFEL 333

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I   C+
Sbjct: 334 RETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCK 393

Query: 246 CGNAKQANGMLTLALDKGFSPNEIT 270
             + K A  +L     +G  P  +T
Sbjct: 394 KEDVKTAAKLLKEMQRQGHVPCVVT 418



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + +++ AK      V  +  +SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLINAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + ++++      S 
Sbjct: 78  ESGFVRDAIECFRLTREHKLRVPFD-TCRKVLEHLMKLKYFKLVWGFYKEILECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G    A  +       G  P+ ++++ L+ GY + G++ +  KL   
Sbjct: 137 YFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+ EA+  F  M    LVP    + +L+  H + G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+   ++M+S+   P 
Sbjct: 257 VDSAMETYKQMLSQCFLPD 275


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 171/396 (43%), Gaps = 36/396 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E +G   +++++  +IH + +      V  +   M      PN     T+I+ALCK   
Sbjct: 142 METKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRS 201

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM--------- 124
                DML+++   R +P V+   ++I    +E  + E + LL+  +R+ +         
Sbjct: 202 ASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTP 261

Query: 125 -IH-------------------------DTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
            IH                         D I    +++  V    +  AL+V E+M +R 
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              ++ +Y   I   C+   +  A  L++EM    ++P    +  LI+G  ++ ++ ++ 
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              E  M  K  P   A+N MI+  C+ G  K+A   ++     G  P+E TY+ L+ GY
Sbjct: 382 KIFE-FMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGY 440

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
           AK+G+I   L+L  +M  +   P +  Y SLI   C  G    A+  F  M+S  L P V
Sbjct: 441 AKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNV 500

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             Y  L+G   +K    +A    E M+     P+ +
Sbjct: 501 VHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDA 536



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 135/301 (44%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +Y  ML      ++ +   ++  LC  G+++    +++   G+ C P  +    LI    
Sbjct: 68  LYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYC 127

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +   I  G++LL  M  K +I   + Y  I++   +  +L     +  EM  RG S N  
Sbjct: 128 RRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQ 187

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           +Y T I A C+     +A+ ++ +M  +   P   TFN +I G  +   + E+L    + 
Sbjct: 188 IYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREA 247

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           + R L P+  ++  +I   C  G A  A+ +L   + +G +P+ IT   LI G    G++
Sbjct: 248 IRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQV 307

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            + L +  +M  + + P    Y  LIS LC+   L  A    + M    + P   IY +L
Sbjct: 308 NDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTL 367

Query: 345 V 345
           +
Sbjct: 368 I 368



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/415 (20%), Positives = 170/415 (40%), Gaps = 49/415 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   + +  F+  +++FNT+I    +        ++ +  +     PN+ +   LI 
Sbjct: 205 ASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIH 264

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+     D+L  + G+  +P +I   +LI  ++   ++ + +++ ++M  + ++ 
Sbjct: 265 GFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMP 324

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA-------------- 172
           D   Y++++    K R L +A  + EEML++    + F+YTT I                
Sbjct: 325 DANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF 384

Query: 173 --------------------YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
                               YC++G ++EA   M  M  AG  P + T+  L++G AK  
Sbjct: 385 EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKG 444

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
            I  SL     MM R+  P+   +  +I   C  G+   A  +      +G  PN + Y+
Sbjct: 445 DISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYT 504

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC---------GKLEEAD 323
            LIG   K+ ++ +    +  M      P       L++ L  C            ++A 
Sbjct: 505 VLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAH 564

Query: 324 K------YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +       F+ + S  L P +  Y +++          KA+ L ++M ++G  P 
Sbjct: 565 EKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPD 619



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/362 (20%), Positives = 133/362 (36%), Gaps = 84/362 (23%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA D+   +  RG +  +I+   LIH +  S + +    + + M E    P+      LI
Sbjct: 274 VASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLI 333

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI---------------- 109
           S LCK   L    ++L+ +  ++  P   + T+LI   ++ +++                
Sbjct: 334 SGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACP 393

Query: 110 ------------------EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
                             +E +  +  M +   I D   Y+ +V    K  ++ ++L + 
Sbjct: 394 DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLL 453

Query: 152 EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKA 211
            +M+KR    N F Y + I  YC  G    A  L  +M++ GL P    + +LI    K 
Sbjct: 454 CDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKK 513

Query: 212 KRIEESLSYCEQMM---------------------------------------------- 225
            ++ ++ +Y E M+                                              
Sbjct: 514 DKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVF 573

Query: 226 ----SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
               S  L P  SA+N +I  LC      +A  +     +KG  P+ IT+  L+ G++  
Sbjct: 574 RGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSA 633

Query: 282 GE 283
           GE
Sbjct: 634 GE 635


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 161/351 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +  FN LI+  ++  R D  + +   +++    P+  T  +LI+ LC   +    ++  
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D +      P +    ++I    +  +    + LLK+M +     D + Y+ I+    K 
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           R +  AL ++ E+  +G   + F Y+  +   C   + EEA+ L  EM +  + P   TF
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L++   K   + E+    + M+ + + P+ + +N ++   C      +A  +    + 
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ++Y+ LI GY K   I E  +L+ EM ++ + P    Y +LIS LCQ G+  E
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A + FK M++    P +     L+    + G    AL L   M    LKP+
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPN 468



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 159/341 (46%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + AF V   + + GF    ++F++LI+ +   D+       +  M+ +   PN  T  T+
Sbjct: 136 DFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTI 195

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   CK G+    V +L ++      P +++  ++I  + ++  + E + +   +  K +
Sbjct: 196 IKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGV 255

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   YS++++        E A  ++ EM+      +   +   +   C+ G + EA  
Sbjct: 256 RPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQG 315

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +++ M   G++P   T+N L+ G     ++ E+    + M+++  +P+  ++N +I   C
Sbjct: 316 IIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYC 375

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  +      +G  PN   Y+ LI G  + G   E  +L+ +M+ +  SP L 
Sbjct: 376 KAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLV 435

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             T L+ SLC+ G L+ A + F+ M+   L P +  Y+ L+
Sbjct: 436 TCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 144/302 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  +L ++NT+I    K  +  +   + + M +    P+     T+I  LCK   +   
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+   I GK   P V   + L+  +   ++ EE   L   M+  N++ D + ++++V  
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   L  A  + + M+++G   N   Y + +  YC   K+ EA  +   M   G  P 
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N+LI G  KA+RI+E+    ++M  R L+P+   +N +I  LC+ G   +A  +  
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
               +G SP+ +T + L+    K G +   L+L+  M+   + P L  Y  LI ++ + G
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483

Query: 318 KL 319
           K+
Sbjct: 484 KI 485



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 158/362 (43%), Gaps = 35/362 (9%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           + HM+     P       L+SAL +     T + +  RI   R    V     LI    +
Sbjct: 72  FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
            +R++    +L ++++     D + +S ++           A+  ++EM+  G+  N   
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL------- 218
           Y T I  +C+ GK   A  L+++M+ AG +P    +N +I+G  K + + E+L       
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251

Query: 219 ----------------------------SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
                                       +   +MMS  ++P    FN ++ +LC+ G   
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLS 311

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A G++ + ++KG  PN  TY+ L+ GY  + ++ E   ++  M  K   P + +Y  LI
Sbjct: 312 EAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILI 371

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           +  C+  +++EA + F  M    L+P    Y +L+    + G   +A  L ++M ++G  
Sbjct: 372 NGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCS 431

Query: 371 PS 372
           P 
Sbjct: 432 PD 433



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 129/264 (48%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           IE+ +     M+ K+ +   + +  ++ A V++++  + L + + +       + F +  
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +    +++ A  ++ ++   G +P   TF+ LI G     +   ++ + ++M++  
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   +N +I+  C+ G    A G+L      G  P+ + Y+ +I G  K+  + E L
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            ++ E++ K + P +  Y+ L+  LC   + EEA   F  M S +++P V  +  LV   
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G  ++A  + + M+ +G++P+
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPN 328



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 114/246 (46%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL   A D+   ++ +G    + +++ L+H +  SD+ +    ++  M+     P+  T 
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  LCK G L     ++  +  K   P      SL+     + ++ E  ++   M+ 
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K  + + ++Y++++    K + ++ A  +++EM  RG   N+F Y T I   C+ G+  E
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L ++M+  G  P   T  +L++   K   ++ +L     M    L P+   ++ +IR
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIR 477

Query: 242 RLCECG 247
            + + G
Sbjct: 478 AMYKSG 483



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 80/200 (40%)

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           C    IE+A      M +    P    F+ L+    + K     LS  +++   ++    
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN +I           A  +L   +  GF P+ +T+S LI G   E +    ++ + E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M      P L  Y ++I   C+ GK   A    K M      P + IY +++    +   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 354 KAKALHLCEEMVSEGLKPST 373
            ++AL +  E+  +G++P  
Sbjct: 240 VSEALDIFSEIKGKGVRPDV 259


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 178/391 (45%), Gaps = 16/391 (4%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A      ++++     ++S+N LI  + K  +    W  Y+ M E    P+ AT   +
Sbjct: 521 EAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADWA-YKGMREKGIEPDIATFNIM 579

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +++  K G  +  + + D++      P +++   ++  + ++ +++E + +L +M+   +
Sbjct: 580 MNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEI 639

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   Y + +    K +  ++    +E +L  G   +  VY T I   C+ G   +A  
Sbjct: 640 HPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAM 699

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +M++ME  G  P   TFN L+ G      + ++LS    MM   + P+ + +N +IR L 
Sbjct: 700 VMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLS 759

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  K+    L+    +G  P++ TY+ LI G AK G  +E + +Y EM    + P   
Sbjct: 760 DAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTS 819

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG------IHLEKGNKAKAL 358
            Y  LIS   + GK+ +A +  K M    + P    Y +++        H E     KA+
Sbjct: 820 TYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCKLCTHPEVEWNKKAM 879

Query: 359 HLCE------EMVSE-GLKP--STSYLCSAS 380
           +L E      EM+ E G  P   T Y  SA+
Sbjct: 880 YLAEAKGLLKEMIEEKGYIPYNQTIYWISAA 910



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 167/368 (45%), Gaps = 32/368 (8%)

Query: 26  FNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +N+LIH    +   +D V  +Y  M+     P+   +  LI +LCK GQL   + +L   
Sbjct: 96  WNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLL--- 152

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV--------Y 136
             +  S   +   ++I  + +    +E    L  M++  ++ DT++++ ++        +
Sbjct: 153 RNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNF 212

Query: 137 AKVKM--------------------RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
           A+ K                      NL +    Y +M+  GF  +   +++ I   C+ 
Sbjct: 213 ARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKD 272

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           GK+ E   L++EME  G+ P   T+  L++   KAK    +L+   QM+ R +      +
Sbjct: 273 GKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVY 332

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             ++  L + G+ ++A     + L+    PN +TY+ L+ G  K G++     +  +M  
Sbjct: 333 TVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           KS+ P +  Y+S+I+   + G LEEA    + M+  ++VP    Y +++    + G +  
Sbjct: 393 KSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEV 452

Query: 357 ALHLCEEM 364
           A  + +EM
Sbjct: 453 ASEMSKEM 460



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 150/312 (48%), Gaps = 1/312 (0%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +LI    KGG  +  +   + +  K     V+    LI  +++  ++       K M  K
Sbjct: 509 SLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADWAY-KGMREK 567

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D   +++++ ++ K  + E  L ++++M   G   +  +    +G  CE GK++EA
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEA 627

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++ +M    + P   T+ + ++  +K KR +      E ++S  +  S   +N +I  
Sbjct: 628 IDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIAT 687

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G  ++A  ++     +GF P+ +T++ L+ GY     + + L  Y  M    ISP 
Sbjct: 688 LCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPN 747

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y ++I  L   G ++E +K+   MKS  + P    Y +L+    + GNK +++ +  
Sbjct: 748 VATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYC 807

Query: 363 EMVSEGLKPSTS 374
           EM+++GL P TS
Sbjct: 808 EMIADGLVPKTS 819



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 171/385 (44%), Gaps = 65/385 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  R  S+  +++NT+I  + +    D  ++    M++    P+  +  TLI   CK G 
Sbjct: 152 LRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGN 211

Query: 74  LQTYVDMLDRI-------HGKRCS---------------------PMVIVNTSLILRIIQ 105
                 ++D I       H    S                     P V+  +S+I R+ +
Sbjct: 212 FARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 271

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           + ++ EG +LL+ M    +  + + Y+ +V +  K ++   AL +Y +M+ RG   +  V
Sbjct: 272 DGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVV 331

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           YT  +    + G + EA               ++TF +L+E                   
Sbjct: 332 YTVLMAGLFKAGDLREA---------------EKTFKMLLEDNE---------------- 360

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
               +P+   +  ++  LC+ G+   A  ++T  L+K   PN +TYS +I GY K+G ++
Sbjct: 361 ----VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLE 416

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E + L  +ME +++ P    Y ++I  L + GK E A +  K M+   +     I ++LV
Sbjct: 417 EAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALV 476

Query: 346 GIHLEKGNKAKALH-LCEEMVSEGL 369
             HL++  + K +  L ++MVS+G+
Sbjct: 477 N-HLKRIGRIKEVKGLVKDMVSKGV 500



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 171/357 (47%), Gaps = 3/357 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  + L+ +  L+  + K+       + ++ +LE+   PN  T   L+  LCK G L +
Sbjct: 323 RGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSS 382

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++ ++  K   P V+  +S+I   +++  +EE + L+++M  +N++ +   Y  ++ 
Sbjct: 383 AEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVID 442

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K    E A  + +EM   G   N+++    +      G+I+E   L+++M + G+  
Sbjct: 443 GLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +  LI+   K    E +LS+ E+M  +++     ++N +I  L + G    A+   
Sbjct: 503 DHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKV-GADWAY 561

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               +KG  P+  T++ ++    K+G+ + +LKL+ +M+   I P+L     ++  LC+ 
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEK 621

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE-MVSEGLKPS 372
           GK++EA      M    + P +  Y   + +   K  +A A+    E ++S G+K S
Sbjct: 622 GKMKEAIDILDQMMFMEIHPNLTTYRIFLDMS-SKHKRADAIFKTHETLLSYGIKLS 677


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 163/361 (45%), Gaps = 2/361 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG     +++N++I    K  R D     ++ M +    P+  T   LI+  CK G+L  
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            ++    + G    P V+  ++L+    +E  +++ +     M R  ++ +   Y+ ++ 
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K+ NL  A  +  EML+ G   N   YT  I   C+  +++EA  L  +M+ AG+ P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N LI G  KAK ++ +L    ++  R + P    +   I  LC     + A  ++
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               + G   N + Y+ L+  Y K G   E L L  EM+   I  T+  +  LI  LC+ 
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590

Query: 317 GKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TS 374
             + +A  YF +I     L     I+ +++    +      A  L E+MV +GL P  T+
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650

Query: 375 Y 375
           Y
Sbjct: 651 Y 651



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/353 (24%), Positives = 152/353 (43%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S N L+H   K  + D V R ++ M+     P   T   +I  +CK G ++    + + +
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P  +   S+I    +  R+++ +   + M       D I Y+ ++    K   L
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
              L  Y EM   G   N   Y+T + A+C+ G +++A     +M   GL P + T+  L
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   K   + ++     +M+   +  +   +  +I  LC+    K+A  +       G 
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  +Y+ LI G+ K   +   L+L  E++ + I P L  Y + I  LC   K+E A  
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
               MK   +     IY +L+  + + GN  + LHL +EM    ++ +    C
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 581



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 156/343 (45%), Gaps = 7/343 (2%)

Query: 32  VVTKSDRN--DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRC 89
           V++K+D +  D++W        N+  P       L S L   G L+  +    ++   R 
Sbjct: 169 VLSKADCDVFDVLWST-----RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 223

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
            P       L+ R  +  + ++     K M+          Y++++    K  ++E+A  
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++EEM  RG   ++  Y + I  + + G++++  C  +EM++   +P   T+N LI    
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  ++   L +  +M    L P+  +++ ++   C+ G  +QA          G  PNE 
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ LI    K G + +  +L  EM    +   +  YT+LI  LC   +++EA++ F  M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  ++P +  Y +L+   ++  N  +AL L  E+   G+KP 
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 172/391 (43%), Gaps = 36/391 (9%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +  +  R ++  G   +++S++TL+    K        + Y  M      PNE T  +LI
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A CK G L     + + +        V+  T+LI  +   ER++E   L  +M    +I
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +  +Y+ +++  VK +N++ AL +  E+  RG   +  +Y TFI   C   KIE A  +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529

Query: 186 MQEMENAGLKP------------------------YDE-----------TFNLLIEGCAK 210
           M EM+  G+K                          DE           TF +LI+G  K
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSA-FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
            K + +++ Y  ++ +   L + +A F  MI  LC+    + A  +    + KG  P+  
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+ L+ G  K+G + E L L  +M    +   L AYTSL+  L  C +L++A  + + M
Sbjct: 650 AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
               + P   +  S++  H E G   +A+ L
Sbjct: 710 IGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           GF   +  +S LI      G ++E ++ + +M+   + P   +   L+    + GK ++ 
Sbjct: 191 GFGVFDALFSVLI----DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++FK M      P V  Y  ++    ++G+   A  L EEM   GL P T
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 9/350 (2%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I++  LI  +    +  L   +Y+ M++    P   T + L++ALCK G L+  +   ++
Sbjct: 126 ITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEK 185

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C+    +    + R I   R++E     + M +   I +   Y++++   VK   
Sbjct: 186 MSSIPCAATWTILIDGLFRAI---RVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGK 241

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A  V +EM     +     YT+ IG +C+ G + +A  L+++M+  G +  + T+N 
Sbjct: 242 VAEAERVLQEMPVPTLAN----YTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNT 297

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDK 262
           LI G  + + I+ +    E+M S   +P    ++ +I  LC      +A  +L TL  + 
Sbjct: 298 LIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNED 357

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
             +PN ++Y+ LI G++K   + +  +L+ EM      P +  Y++LI  LC  G+  EA
Sbjct: 358 DCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEA 417

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y + M    ++P V +Y S++      G    A  + + MV+ G +P+
Sbjct: 418 HSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPN 467



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 4/369 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++++G+    +++NTLIH   +    D  + + + M  N   P+  T   LI+
Sbjct: 276 AYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIA 335

Query: 67  ALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            LC+  +L    D+L  +  +  C+P V+   +LI    +  R+ +   L   M+     
Sbjct: 336 GLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQH 395

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + YS ++           A    EEM+ +       VY++ I   C  G+++ A+ +
Sbjct: 396 PDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTV 455

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
              M   G +P    +N LI G  K  R+ ++    ++M  R   P    +  +I  LC 
Sbjct: 456 FDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCR 515

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
                +A  +   +L++G   +E + + +I       + Q VL++         SPT   
Sbjct: 516 WSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLA---TGNSPTAFF 572

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y ++I SLC+   L EA +  + M    + P     ++LVG    +     A+   EEMV
Sbjct: 573 YATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMV 632

Query: 366 SEGLKPSTS 374
             G KPS  
Sbjct: 633 RLGSKPSVG 641



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 6/335 (1%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           RY E+        ++  LI  + ++ R D     ++ M ++   PN  T   +I+ L K 
Sbjct: 181 RYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKA 239

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+    V   +R+  +   P +   TS+I    +   + +   LL+ M RK    D + Y
Sbjct: 240 GK----VAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTY 295

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +++   +++ ++ A  + EEM    F  + F Y   I   C   ++ EA  L+  + N
Sbjct: 296 NTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRN 355

Query: 192 AG-LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
                P   ++N LI+G +KA R+ ++     +M++    P    ++ +IR LC  G A 
Sbjct: 356 EDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRAS 415

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A+  L   + K   P    YS +I G  + GE+     ++  M      P L  Y SLI
Sbjct: 416 EAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLI 475

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             LC+ G+L +A    K M      P    Y +L+
Sbjct: 476 YGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLI 510



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 166/356 (46%), Gaps = 5/356 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+NTLI   +K+ R +  ++++  M+   ++P+  T  TLI  LC  G+       L
Sbjct: 362 NVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYL 421

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + + GK+  P V V +S+I  + +   ++    +   M+      +   Y+ ++Y   K 
Sbjct: 422 EEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKT 481

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             L  A +  +EM +RG S +   Y T I   C + + +EA  L       G++  + + 
Sbjct: 482 GRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSC 541

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++I   A  + +E++      +++    P+   +  +I  LC+  N  +A  +L   + 
Sbjct: 542 NVVI---ASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIG 598

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+  T   L+G   ++ +    +    EM      P++  Y++L+++L + GK  E
Sbjct: 599 AGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSE 658

Query: 322 ADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE-GLKPSTSY 375
           A    + + SH S  P    Y  L+  +  +    +A ++ +E+ S+ G++   +Y
Sbjct: 659 AHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAY 714



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 164/352 (46%), Gaps = 5/352 (1%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           ++++I  + ++   D    ++  M+ N   PN A   +LI  LCK G+L      +  + 
Sbjct: 436 YSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMT 495

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            + CSP  +   +LI+ + +  R +E   L  R L + +     + ++++     +R LE
Sbjct: 496 ERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI---ASLRCLE 552

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  V   +L  G S  +F Y T I + C+   + EA  L+++M  AG+KP   T + L+
Sbjct: 553 QAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALV 612

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT-LALDKGF 264
               +  +   ++++ E+M+     PS   ++ ++  L + G   +A+ +L  L      
Sbjct: 613 GAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSC 672

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+E+ Y  LI  Y+ + +++E   +  E++ K    ++ AY +L+  L +   L+   +
Sbjct: 673 FPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYE 732

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
             + MK +  V     +  L+      G   +A+ +  EM  + L PS + +
Sbjct: 733 LLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM-KKVLTPSAAII 783



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 34/301 (11%)

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           +I+  + EE   L K    + +I D+I Y +++        L+ A  +YEEM+ RG    
Sbjct: 100 LIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPV 159

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
                  + A C+ G +E A   ++  E     P   T+ +LI+G  +A R++E+  Y E
Sbjct: 160 VLTCKFLLNALCKSGNLELA---LRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFE 216

Query: 223 QMMSRKL------------------------------LPSCSAFNEMIRRLCECGNAKQA 252
           +M    +                              +P+ + +  +I   C+ G+  +A
Sbjct: 217 EMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKA 276

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L     KG+  + +TY+ LI G+ +  EI    +L  EM+     P +  Y  LI+ 
Sbjct: 277 YHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAG 336

Query: 313 LCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           LC+  +L EA      +++     P V  Y +L+    +      A  L  EMV+ G  P
Sbjct: 337 LCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHP 396

Query: 372 S 372
            
Sbjct: 397 D 397



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 18/270 (6%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           R++  H    Y+    A ++    E A  +++E   +    +S  Y   I   C +GK++
Sbjct: 83  RQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLK 142

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L +EM + GL+P   T   L+    K+  +E +L Y E+M S   +P  + +  +I
Sbjct: 143 LACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTILI 199

Query: 241 RRLCECGNAKQA----NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             L       +A      M   A+     PN  TY+ +I G  K G++ E  ++  EM  
Sbjct: 200 DGLFRAIRVDEACYYFEEMKHTAI-----PNNWTYTVVINGLVKAGKVAEAERVLQEMPV 254

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
               PTL  YTS+I   C+ G + +A    + MK          Y +L+  H       +
Sbjct: 255 ----PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDR 310

Query: 357 ALHLCEEMVSEGLKPS--TSYLCSASTCRG 384
           A  L EEM S    P   T  +  A  CR 
Sbjct: 311 AYELLEEMKSNDFVPDIFTYDILIAGLCRA 340



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 2/194 (1%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL-QTYVDMLDR 83
           + + L+  + + D+  +     + M+     P+  T  TL++AL K G+  + +V +   
Sbjct: 607 TVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRL 666

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           I    C P  +    LI     ++++EE   +L+ +  K  I   +AY+ ++    + RN
Sbjct: 667 ISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRN 726

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+    +  EM +  F  N   +   I  +C  G+ + A  ++ EM+   L P       
Sbjct: 727 LQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTPSAAIIKF 785

Query: 204 LIEGCAKAKRIEES 217
           L++  A+A+R +ES
Sbjct: 786 LVDELARAEREQES 799



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A +V + L+ +    S++++NTL+  + ++    +V+ + + M  N    NEAT   L
Sbjct: 693 EEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNIL 752

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           I   C+ GQ    V +L  +  K  +P   +   L+  + + ER +E   L+KR
Sbjct: 753 IQGFCRLGQTDRAVRVLSEMK-KVLTPSAAIIKFLVDELARAEREQESKDLVKR 805


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 163/344 (47%), Gaps = 6/344 (1%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A ++   +++ G   S+  +N ++  +   +R  +++ +Y+ M  +   PN  T  
Sbjct: 126 LAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYN 185

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+ ALCK  ++     +L  +  K C P  +  T++I  + +   ++EG     R L +
Sbjct: 186 VLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-----RELAE 240

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y+ ++    K  + + A  +  EM+++G S N   Y+T I   C  G+IE A
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFNEMIR 241
              + +M   G  P   T + L++GC       ++L    QM+    L P+  A+N +++
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C  GN  +A  + +   + G SPN  TY  LI G+AK G +   + ++ +M      P
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +  YT+++ +LC+  K +EA+   +IM   +  P V  + + +
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 160/356 (44%), Gaps = 6/356 (1%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F  + ++F  +I  +    + D V  + Q M     + +E    ++IS   + G  +  V
Sbjct: 72  FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           +M  RI    C P V +   ++  ++ E RI+   ++ + M R     +   Y++++ A 
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K   ++ A  +  EM  +G   ++  YTT I + CE G ++E   L +  E     P  
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVV 246

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
             +N LI G  K    + +     +M+ + + P+  +++ +I  LC  G  + A   LT 
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCG 317
            L +G  PN  T S L+ G    G   + L L+ +M     + P + AY +L+   C  G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + +A   F  M+     P +  Y SL+    ++G+   A+++  +M++ G  P+ 
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 165/381 (43%), Gaps = 39/381 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           ++ AF++ R + ++G S ++IS++TLI+V+  S + +L +     ML+   +PN  T+ +
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321

Query: 64  LISALCKGGQLQTYVDMLDR-IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L+      G     +D+ ++ I G    P V+   +L+        I + + +   M   
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               +   Y  ++    K  +L+ A+ ++ +ML  G   N  VYT  + A C + K +EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441

Query: 183 NCLMQEMENAGLKPYDETFNL------------------------------------LIE 206
             L++ M      P   TFN                                     L++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G AKA RIEE+     ++  R +  S S +N ++   C  G    A  ++   +  G SP
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561

Query: 267 NEITYSHLIGGYAKEGEIQEVLKL--YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           +EIT + +I  Y K+G+ +   ++        +   P + +YT++I  LC+    E+   
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 621

Query: 325 YFKIMKSHSLVPGVDIYESLV 345
             + M S  +VP +  +  L+
Sbjct: 622 LLERMISAGIVPSIATWSVLI 642



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/405 (20%), Positives = 171/405 (42%), Gaps = 42/405 (10%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           ++ + V R +++ GF  ++ ++N L+  + K+++ D   ++   M      P+  +  T+
Sbjct: 163 QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS++C+ G ++   ++ +R       P+V V  +LI  + +E   +    L++ M+ K +
Sbjct: 223 ISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGI 277

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG---------------------FSA-- 161
             + I+YS ++        +E A     +MLKRG                     F A  
Sbjct: 278 SPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD 337

Query: 162 -------------NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
                        N   Y T +  +C +G I +A  +   ME  G  P   T+  LI G 
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
           AK   ++ ++    +M++    P+   +  M+  LC     K+A  ++ +   +  +P+ 
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            T++  I G    G +    K++ +ME +    P +  Y  L+  L +  ++EEA    +
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +    +      Y +L+      G    AL L  +M+ +G  P 
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/282 (19%), Positives = 118/282 (41%), Gaps = 6/282 (2%)

Query: 98  SLILRIIQEERIEEGMVLLKRMLRKNMI-HDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
            ++ R+ QE  +   +   K +   N+  H  + + +++        ++S   + ++M  
Sbjct: 45  DVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKL 104

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           +GF  +  ++ + I  Y + G  E A  +   ++  G  P  + +N +++      RI+ 
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 164

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
                  M      P+   +N +++ LC+      A  +L    +KG  P+ ++Y+ +I 
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              + G ++E  +L    E     P +  Y +LI+ LC+    + A +  + M    + P
Sbjct: 225 SMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
            V  Y +L+ +    G    A     +M+  G  P+   L S
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 10/367 (2%)

Query: 10   VCRYLEQRGFSLSLISFNTLIHVVT----KSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            +C  +E RGF   ++   TL  ++T    KS  N  VW  +  + +    PN     ++I
Sbjct: 854  ICEMME-RGF---VVDNATLTLIITAFCEKSLVNRAVW-FFHKVTKMGLSPNLINYSSMI 908

Query: 66   SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            S LCK G ++   ++L+ +      P V  +TSLI  + ++   E    L  +++R +  
Sbjct: 909  SGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY 968

Query: 126  HDTI-AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               +  Y+ ++    K   L  A +++E M ++G   N+  YTT I  +C+ G   +A  
Sbjct: 969  KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 1028

Query: 185  LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
            LM+ M N G  P   T+N +++G  K  R EE+          ++      +  +I   C
Sbjct: 1029 LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQC 1088

Query: 245  ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
            +  +  QA   L      GF P+   Y+ LI  + ++  +++  KL+ E+    ++PT  
Sbjct: 1089 KRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKE 1148

Query: 305  AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
             YTS+I   C+  K+  A K+F+ M  H   P    Y +L+    ++    +A  L + M
Sbjct: 1149 TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTM 1208

Query: 365  VSEGLKP 371
            + +GL P
Sbjct: 1209 IDKGLSP 1215



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 1/267 (0%)

Query: 108  RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
            +++E + ++  M  + ++  T   + I+    +MR +E A  V++EM  RG   +S  Y 
Sbjct: 776  KLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYK 835

Query: 168  TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
              I  YC  G + EA+  + EM   G    + T  L+I    +   +  ++ +  ++   
Sbjct: 836  YIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKM 895

Query: 228  KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             L P+   ++ MI  LC+ G+ KQA  +L   +  G+ PN  T++ LI G  K+G  +  
Sbjct: 896  GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERA 955

Query: 288  LKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             +L+ ++    +  P +  YT++IS  C+  KL  A+  F+ MK   LVP  + Y +L+ 
Sbjct: 956  FRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLID 1015

Query: 347  IHLEKGNKAKALHLCEEMVSEGLKPST 373
             H + GN +KA  L E M +EG  P+T
Sbjct: 1016 GHCKAGNFSKAYELMELMSNEGFFPNT 1042



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/383 (22%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 7    AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            A D+   +  +G  L+    N +I V  +    +    ++  M     YP+  T + +I 
Sbjct: 780  AVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIV 839

Query: 67   ALCKGGQL----QTYVDMLDRIHGKRCSPMVIVNTSLILRII---QEERIEEGMVLLKRM 119
              C+ G +    +   +M++R         V+ N +L L I    ++  +   +    ++
Sbjct: 840  GYCRNGNVLEADRWICEMMER-------GFVVDNATLTLIITAFCEKSLVNRAVWFFHKV 892

Query: 120  LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             +  +  + I YS ++    K  +++ A  + EEM+K G+  N + +T+ I   C+ G  
Sbjct: 893  TKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWT 952

Query: 180  EEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
            E A    ++ + +   KP   T+  +I G  K +++  +    E+M  + L+P+ + +  
Sbjct: 953  ERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTT 1012

Query: 239  MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            +I   C+ GN  +A  ++ L  ++GF PN  TY+ ++ G  K G  +E  KL        
Sbjct: 1013 LIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQ 1072

Query: 299  ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            I      YT LIS  C+   + +A  +   M      P + +Y +L+     +     + 
Sbjct: 1073 IEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSE 1132

Query: 359  HLCEEMVSEGLKPS----TSYLC 377
             L +E++  GL P+    TS +C
Sbjct: 1133 KLFDEVIKLGLAPTKETYTSMIC 1155



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 166/374 (44%), Gaps = 1/374 (0%)

Query: 1    MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
            MRL E A +V   +  RG      ++  +I    ++       R    M+E     + AT
Sbjct: 809  MRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNAT 868

Query: 61   IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            +  +I+A C+   +   V    ++     SP +I  +S+I  + +   +++   LL+ M+
Sbjct: 869  LTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV 928

Query: 121  RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKI 179
            +     +   ++ +++   K    E A  ++ ++++   +  N   YT  I  YC+  K+
Sbjct: 929  KNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKL 988

Query: 180  EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
              A  L + M+  GL P   T+  LI+G  KA    ++    E M +    P+   +N +
Sbjct: 989  SRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSI 1048

Query: 240  IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
            +  LC+ G A++A  +L          + +TY+ LI    K  ++ + L    +M     
Sbjct: 1049 VDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGF 1108

Query: 300  SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
             P +  YT+LI++ C+   +++++K F  +    L P  + Y S++  +  +   + A+ 
Sbjct: 1109 QPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVK 1168

Query: 360  LCEEMVSEGLKPST 373
              ++M   G  P +
Sbjct: 1169 FFQKMSDHGCAPDS 1182



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 3/282 (1%)

Query: 45   IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
            +++ M E    PN  T  TLI   CK G      ++++ +  +   P      S++  + 
Sbjct: 994  LFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLC 1053

Query: 105  QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
            +  R EE   LL    +  +  D + Y++++  + K  ++  ALV   +M K GF  +  
Sbjct: 1054 KRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIH 1113

Query: 165  VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            +YTT I A+C    ++++  L  E+   GL P  ET+  +I G  + K++  ++ + ++M
Sbjct: 1114 LYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKM 1173

Query: 225  MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                  P   ++  +I  LC+     +A  +    +DKG SP E+T   L   Y K  + 
Sbjct: 1174 SDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDF 1233

Query: 285  QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
               + +   +  K    T+    +LI  LC   K+  A  +F
Sbjct: 1234 ASAMVILERLNKKLWIRTV---HTLIRKLCCEKKVALAALFF 1272



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 1/301 (0%)

Query: 61   IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            +  ++    + G+L+  VDM+  +  +       V   +IL   +   +E    +   M 
Sbjct: 764  VECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMS 823

Query: 121  RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             + +  D+  Y  I+    +  N+  A     EM++RGF  ++   T  I A+CE   + 
Sbjct: 824  ARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVN 883

Query: 181  EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
             A     ++   GL P    ++ +I G  K   ++++    E+M+     P+      +I
Sbjct: 884  RAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLI 943

Query: 241  RRLCECGNAKQANGM-LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
              LC+ G  ++A  + L L     + PN  TY+ +I GY KE ++     L+  M+ + +
Sbjct: 944  HGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGL 1003

Query: 300  SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
             P    YT+LI   C+ G   +A +  ++M +    P    Y S+V    ++G   +A  
Sbjct: 1004 VPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFK 1063

Query: 360  L 360
            L
Sbjct: 1064 L 1064



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 105/204 (51%), Gaps = 1/204 (0%)

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           +G + E GK++EA  ++ +M N GL       N +I   A+ + +E + +  ++M +R +
Sbjct: 768 VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGV 827

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
            P    +  +I   C  GN  +A+  +   +++GF  +  T + +I  + ++  +   + 
Sbjct: 828 YPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVW 887

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
            ++++    +SP L  Y+S+IS LC+ G +++A +  + M  +   P V  + SL+    
Sbjct: 888 FFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLC 947

Query: 350 EKGNKAKALHLCEEMV-SEGLKPS 372
           +KG   +A  L  +++ S+  KP+
Sbjct: 948 KKGWTERAFRLFLKLIRSDNYKPN 971



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/228 (18%), Positives = 90/228 (39%), Gaps = 35/228 (15%)

Query: 4    FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            F  A+++   +   GF  +  ++N+++  + K  R +  +++     +N    +  T   
Sbjct: 1023 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 1082

Query: 64   LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            LIS  CK   +                                    + +V L +M +  
Sbjct: 1083 LISEQCKRADMN-----------------------------------QALVFLNKMFKVG 1107

Query: 124  MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
               D   Y+ ++ A  +   ++ +  +++E++K G +     YT+ I  YC   K+  A 
Sbjct: 1108 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAV 1167

Query: 184  CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
               Q+M + G  P   ++  LI G  K  R++E+    + M+ + L P
Sbjct: 1168 KFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 1215


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 36/361 (9%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R ++Q G   +++S++TL+    K D      + Y  M      PNE T  +L+ A CK 
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKI 286

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L     + + +        V+  T+LI  +   ER++E   L  +M+   +I +  +Y
Sbjct: 287 GNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASY 346

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +++  VK +N++ AL +  E+  RG   +  +Y TFI   C   KIE A  +M EM+ 
Sbjct: 347 NALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQE 406

Query: 192 AGLK------------------PYDE-----------------TFNLLIEGCAKAKRIEE 216
            G+K                  P +                  TF +LI+G  K K + +
Sbjct: 407 NGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSK 466

Query: 217 SLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           ++ Y  +M +   L P+ + +  MI  LC+    K A  +      +G  P+   Y+ L+
Sbjct: 467 AIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLM 526

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  K+G + E L L  +M    +   L AYTSL+    QC +L++A  + + M    ++
Sbjct: 527 DGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEIL 586

Query: 336 P 336
           P
Sbjct: 587 P 587



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 167/390 (42%), Gaps = 36/390 (9%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG     +++N++I    K  R D     ++ M      P+  T  +LI+  CK G+L  
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPK 221

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            ++    +      P V+  ++L+    +E+ +++ +     M R   + +   Y+ +V 
Sbjct: 222 GLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVD 281

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K+ NL  A  +  EML+ G   N   YT  I   C+  +++EA  L  +M  AG+ P
Sbjct: 282 ANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIP 341

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N LI G  KAK ++ +L    ++  R + P    +   I  LC     + A  ++
Sbjct: 342 NLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVM 401

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME--------------------- 295
               + G   N + Y+ L+  Y K G   E L L  EM+                     
Sbjct: 402 NEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKN 461

Query: 296 ---YKSIS------------PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
               K+I             P    YT++I  LC+  +++ A   F+ M    LVP    
Sbjct: 462 KLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTA 521

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           Y SL+  +L++GN  +AL L ++M   G+K
Sbjct: 522 YTSLMDGNLKQGNMLEALALRDKMAEIGMK 551



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 149/340 (43%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S N L+H   K  + D V R ++ M+     P   T   +I  + K G ++    + + +
Sbjct: 100 SCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEM 159

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P  +   S+I    +  R+++ +   + M   +   D I Y+ ++    K   L
Sbjct: 160 KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKL 219

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
              L  Y EM + G   N   Y+T + A+C+   +++A     +M   G  P + T+  L
Sbjct: 220 PKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSL 279

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++   K   + ++     +M+   +  +   +  +I  LC+    K+A  +    +  G 
Sbjct: 280 VDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGV 339

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  +Y+ LI G+ K   +   L+L  E++ + I P L  Y + I  LC   K+E A  
Sbjct: 340 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKV 399

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
               M+ + +     IY +L+  + + GN  + LHL EEM
Sbjct: 400 VMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 143/321 (44%)

Query: 52  NIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE 111
           N+  P       L S L   G L+       ++   R  P       L+ +  +  + + 
Sbjct: 57  NVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDG 116

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
                K M+          Y++++    K  ++E+A  ++EEM  RG   ++  Y + I 
Sbjct: 117 VKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMID 176

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
            Y + G++++     +EM++   +P   T+N LI    K+ ++ + L +  +M    L P
Sbjct: 177 GYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKP 236

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +  +++ ++   C+    +QA          G  PNE TY+ L+    K G + +  +L 
Sbjct: 237 NVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLA 296

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            EM    +   +  YT+LI  LC   +++EA+K F  M +  ++P +  Y +L+   ++ 
Sbjct: 297 NEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKA 356

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
            N  +AL L  E+   G++P 
Sbjct: 357 KNMDRALELLNELKGRGIQPD 377



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 1/177 (0%)

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL-LPSCSAFNEMIRRLCECGNAKQANGM 255
           Y +  ++L E       +EE   + E   +R + +P    F+ +   L + G  ++A   
Sbjct: 26  YYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQC 85

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            +        P   + + L+  +AK G+   V + + +M      PT+  Y  +I  + +
Sbjct: 86  FSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWK 145

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G +E A   F+ MK   L+P    Y S++  + + G     ++  EEM S   +P 
Sbjct: 146 EGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPD 202


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 166/352 (47%)

Query: 21  LSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           ++++  NT+I       +      +Y+ M      P+  T   L+  LCK G+  + V M
Sbjct: 311 VNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRM 370

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           LD +  K C+P ++  ++L+    +    ++   +L +ML K    ++  Y+ I+YA  K
Sbjct: 371 LDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK 430

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              L+ A  + +EM  +G   +   Y T I   C    +EEA  + + +   G+     T
Sbjct: 431 DGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGIT 490

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N LI    +  R +E L    +M+         ++N +I+ LC+ GN  ++  +L   +
Sbjct: 491 YNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMV 550

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG  PN  +Y+ LI    K G++++ L+L  EM  + ++P +  Y +LI+ LC+ G   
Sbjct: 551 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 610

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            A    + + + ++ P +  Y  L+  H +      A  L ++ +S G+ P+
Sbjct: 611 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPN 662



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 175/371 (47%), Gaps = 5/371 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ E A  V R + Q G   S++++  L+  + ++ + D        ML  +   N   +
Sbjct: 262 RVREAARLVDRMMTQ-GCMPSVVTYGFLLQGLCRTRQADEACA----MLGRLPEVNVVML 316

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I      G+L    ++ + +  K C P V   + L+  + +  R    + +L  M  
Sbjct: 317 NTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEE 376

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K    + + YS ++++  +    + A  + ++ML +GFS NS  Y   I A C+ GK+++
Sbjct: 377 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQ 436

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+QEM++ G KP   T+N +I        +EE+      ++   ++ +   +N +I 
Sbjct: 437 ATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIH 496

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L   G  ++   + +  L  G   + I+Y+ LI    KEG +   + L  EM  K I P
Sbjct: 497 ALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKP 556

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
              +Y  LI+ LC+ GK+ +A +  K M +  L P +  Y +L+    + G    AL+L 
Sbjct: 557 NNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 616

Query: 362 EEMVSEGLKPS 372
           E++ +E + P 
Sbjct: 617 EKLPNENVHPD 627



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 138/277 (49%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  +   +E++G + ++++++TL+H   ++   D    +   ML      N      
Sbjct: 364 FGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNG 423

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I ALCK G+L     ++  +  + C P +    ++I  +   + +EE   + + ++ + 
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + I Y+ +++A ++    +  L +  EML  G   +   Y   I A C+ G ++ + 
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSM 543

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L++EM   G+KP + ++N+LI    KA ++ ++L   ++M+++ L P    +N +I  L
Sbjct: 544 ALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 603

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
           C+ G    A  +L    ++   P+ +TY+ LI  + K
Sbjct: 604 CKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCK 640



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 152/329 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    + +++ L+H + K  R     R+   M E    PN  T  TL+ + C+ G    
Sbjct: 342 KGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDD 401

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              MLD++  K  S        +I  + ++ ++++   L++ M  +    D   Y+ ++Y
Sbjct: 402 ARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIY 461

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  +E A  ++  +++ G  AN   Y T I A    G+ +E   L  EM   G + 
Sbjct: 462 HLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQL 521

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N LI+   K   ++ S++  E+M+++ + P+  ++N +I  LC+ G  + A  + 
Sbjct: 522 DVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELS 581

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L++G +P+ +TY+ LI G  K G     L L  ++  +++ P +  Y  LIS  C+ 
Sbjct: 582 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 641

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             L++A        S  +VP    +  +V
Sbjct: 642 RLLDDAAMLLDKAISGGIVPNERTWGMMV 670



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 126/265 (47%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GFS++   +N +I+ + K  + D   R+ Q M      P+  T  T+I  LC    ++ 
Sbjct: 412 KGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEE 471

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +   +  +      I   +LI  +++  R +EG+ L   ML      D I+Y+ ++ 
Sbjct: 472 AEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIK 531

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K  N++ ++ + EEM+ +G   N+F Y   I   C+ GK+ +A  L +EM N GL P
Sbjct: 532 ALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTP 591

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI G  K      +L+  E++ +  + P    +N +I   C+      A  +L
Sbjct: 592 DIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLL 651

Query: 257 TLALDKGFSPNEITYSHLIGGYAKE 281
             A+  G  PNE T+  ++  + ++
Sbjct: 652 DKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/380 (21%), Positives = 156/380 (41%), Gaps = 31/380 (8%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S S  S+N ++  + ++D +     +Y+ ML +   P   T      ALC+ G+    + 
Sbjct: 139 SPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALA 198

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +L  +    C P  ++  ++I  ++ +  + E  +LL  ML      D   ++ +V    
Sbjct: 199 LLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLC 258

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE----------YGKIEEANCLM--- 186
            +  +  A  + + M+ +G   +   Y   +   C            G++ E N +M   
Sbjct: 259 GLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNT 318

Query: 187 ------------------QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
                             + M + G  P   T+++L+ G  K  R   ++   ++M  + 
Sbjct: 319 VIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKG 378

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   ++ ++   C  G    A  ML   L KGFS N   Y+ +I    K+G++ +  
Sbjct: 379 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQAT 438

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +L  EM+ +   P +  Y ++I  LC    +EEA+  F+ +    +V     Y +L+   
Sbjct: 439 RLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHAL 498

Query: 349 LEKGNKAKALHLCEEMVSEG 368
           L  G   + L L  EM+  G
Sbjct: 499 LRNGRWQEGLRLASEMLLHG 518



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/287 (19%), Positives = 114/287 (39%), Gaps = 32/287 (11%)

Query: 115 LLKRMLRKNMIHDTI-AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
           LL +M R+  +  +  +Y++++    +      AL++Y  ML+      +F +     A 
Sbjct: 128 LLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARAL 187

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           C  G+  +A  L++ M   G  P    +  +I        + E+    ++M+        
Sbjct: 188 CRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADV 247

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK------------- 280
           + FN+++  LC  G  ++A  ++   + +G  P+ +TY  L+ G  +             
Sbjct: 248 NTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGR 307

Query: 281 ------------------EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
                             EG++    +LY  M  K   P +  Y+ L+  LC+ G+   A
Sbjct: 308 LPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +    M+     P +  Y +L+      G    A  + ++M+++G 
Sbjct: 368 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF 414


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 169/358 (47%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           +  +  G + +L + N LI+           + ++ ++L+   +P+  T+ TLI  LC  
Sbjct: 117 KQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFC 176

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+++  +   D++  +      +   +LI  + +    +    LL+++   ++  D + Y
Sbjct: 177 GEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMY 236

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + I++   K + +  A  +Y EM+ +G S N F Y T I  +C  G ++EA  L+ EM+ 
Sbjct: 237 TTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKL 296

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   TFN+LI+   K  +I+E++S  E+M  + + P+   +  +I  LC+  + ++
Sbjct: 297 KNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLER 356

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +     ++G  P+  +Y+ L+    K G ++   + +  +  K     +  Y  +I+
Sbjct: 357 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMIN 416

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            LC+ G   +       M+    +P    +++++    EK    KA     EM++ GL
Sbjct: 417 GLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 161/329 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + +RG+    I+ NTLI  +            +  ++      ++ +  TLI+
Sbjct: 147 AFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLIN 206

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+ +    +L ++ G    P V++ T++I  + + +R+ +   L   M+ K +  
Sbjct: 207 GLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISP 266

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ ++Y    M NL+ A  +  EM  +  + + + +   I A  + GKI+EA  L 
Sbjct: 267 NVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLF 326

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM++  + P   T+  LI+G  K   +E +++ C++M  + + P   ++  ++  LC+ 
Sbjct: 327 EEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 386

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A       L KG+  N  TY+ +I G  K G   +V+ L  +ME K   P    +
Sbjct: 387 GRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITF 446

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            ++I +L +  + ++A+K+ + M +  L+
Sbjct: 447 KTIICALFEKDENDKAEKFLREMIARGLL 475



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 140/313 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P       ++S+L K     T + +  +      +P +     LI        I     +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              +L++    D I  + ++        ++ AL  +++++ +GF  +   Y T I   C+
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ +    L++++E   +KP    +  +I    K KR+ ++     +M+ + + P+   
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I   C  GN K+A  +L     K  +P+  T++ LI    KEG+I E + L+ EM+
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
           +K++ P +  YTSLI  LC+   LE A    K MK   + P V  Y  L+    + G   
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390

Query: 356 KALHLCEEMVSEG 368
            A    + ++ +G
Sbjct: 391 NAKQFFQHLLVKG 403



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 136/296 (45%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V   +R+   R  P      +++  +++ +     + L K+     +  +    ++++  
Sbjct: 78  VASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINC 137

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              + ++  A  V+  +LKRG+  ++    T I   C  G+I+ A     ++   G +  
Sbjct: 138 FCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLD 197

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++  LI G  KA   +       ++    + P    +  +I  LC+      A  + +
Sbjct: 198 QVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYS 257

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + KG SPN  TY+ LI G+   G ++E   L  EM+ K+I+P +  +  LI +L + G
Sbjct: 258 EMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEG 317

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K++EA   F+ MK  ++ P +  Y SL+    +  +  +A+ LC++M  +G++P  
Sbjct: 318 KIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 373



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 61/121 (50%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +C+ ++++G    + S+  L+  + K  R +   + +QH+L    + N  T   +
Sbjct: 355 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVM 414

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G     +D+  ++ GK C P  I   ++I  + +++  ++    L+ M+ + +
Sbjct: 415 INGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474

Query: 125 I 125
           +
Sbjct: 475 L 475


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 175/382 (45%), Gaps = 16/382 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG    ++S+N LI  + K  +    W  Y+ M E    P+ AT   ++++  K G 
Sbjct: 532 MQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGD 590

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +  + + D++      P ++    ++  + +  ++EE + +L +M+   +  +   Y +
Sbjct: 591 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 650

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +    K +  ++    +E +L  G   +  VY T I   C+ G  ++A  +M +ME  G
Sbjct: 651 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 710

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   TFN L+ G      + ++LS    MM   + P+ + +N +IR L + G  K+ +
Sbjct: 711 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 770

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             L+    +G  P++ TY+ LI G AK G ++  + +Y EM    + P    Y  LIS  
Sbjct: 771 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 830

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG------IHLEKGNKAKALHLCE----- 362
              GK+ +A +  K M    + P    Y +++        H +     KA++L E     
Sbjct: 831 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLL 890

Query: 363 -EMVSE-GLKP--STSYLCSAS 380
            EMV E G  P   T Y  SA+
Sbjct: 891 KEMVEEKGYIPCNQTIYWISAA 912



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 164/368 (44%), Gaps = 32/368 (8%)

Query: 26  FNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +N+LIH    +   +D V  IY  M+     P+   +  LI + CK G+L   + +L   
Sbjct: 98  WNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL--- 154

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +  S   +   ++I  + +    +E    L  M++  ++ DT++Y+ ++    K+ N 
Sbjct: 155 RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNF 214

Query: 145 --ESALV--------------------------VYEEMLKRGFSANSFVYTTFIGAYCEY 176
               ALV                           Y +M+  GF  +   +++ I   C+ 
Sbjct: 215 VRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKG 274

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           GK+ E   L++EME   + P   T+  L++   KA     +L+   QM+ R +      +
Sbjct: 275 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 334

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             ++  L + G+ ++A     + L+    PN +TY+ L+ G  K G++     +  +M  
Sbjct: 335 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 394

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           KS+ P +  Y+S+I+   + G LEEA    + M+  ++VP    Y +++    + G +  
Sbjct: 395 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 454

Query: 357 ALHLCEEM 364
           A+ L +EM
Sbjct: 455 AIELSKEM 462



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 168/385 (43%), Gaps = 65/385 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  R  S+  +++NT+I  + +    D  ++    M++    P+  +  TLI   CK G 
Sbjct: 154 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 213

Query: 74  LQTYVDMLDRI------------------HG----------KRCSPMVIVNTSLILRIIQ 105
                 ++D I                  H               P V+  +S+I R+ +
Sbjct: 214 FVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 273

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
             ++ EG +LL+ M   ++  + + Y+ +V +  K      AL +Y +M+ RG   +  V
Sbjct: 274 GGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVV 333

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           YT  +    + G + EA               ++TF +L+E                   
Sbjct: 334 YTVLMDGLFKAGDLREA---------------EKTFKMLLED------------------ 360

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
               +P+   +  ++  LC+ G+   A  ++T  L+K   PN +TYS +I GY K+G ++
Sbjct: 361 --NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 418

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E + L  +ME +++ P    Y ++I  L + GK E A +  K M+   +     I ++LV
Sbjct: 419 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 478

Query: 346 GIHLEKGNKAKALH-LCEEMVSEGL 369
             HL++  + K +  L ++MVS+G+
Sbjct: 479 N-HLKRIGRIKEVKGLVKDMVSKGV 502



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 172/357 (48%), Gaps = 3/357 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  + L+ +  L+  + K+       + ++ +LE+ + PN  T   L+  LCK G L +
Sbjct: 325 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 384

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++ ++  K   P V+  +S+I   +++  +EE + LL++M  +N++ +   Y  ++ 
Sbjct: 385 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 444

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K    E A+ + +EM   G   N+++    +      G+I+E   L+++M + G+  
Sbjct: 445 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 504

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +  LI+   K    E +L++ E+M  R +     ++N +I  + + G    A+   
Sbjct: 505 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAY 563

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               +KG  P+  T++ ++    K+G+ + +LKL+ +M+   I P+L +   ++  LC+ 
Sbjct: 564 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 623

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE-MVSEGLKPS 372
           GK+EEA      M    + P +  Y   +     K  +A A+    E ++S G+K S
Sbjct: 624 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS-SKHKRADAIFKTHETLLSYGIKLS 679



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 10/221 (4%)

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           ++Y +M+  G S + F     I ++C+ G++  A  L++   N  +     T+N +I G 
Sbjct: 117 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGL 173

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +    +E+  +  +M+   +LP   ++N +I   C+ GN  +A  +    +D+    N 
Sbjct: 174 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL----VDEISELNL 229

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           IT++ L+  Y     I+E    Y +M      P +  ++S+I+ LC+ GK+ E     + 
Sbjct: 230 ITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE 286

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           M+  S+ P    Y +LV    +      AL L  +MV  G+
Sbjct: 287 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 327



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 229 LLPSCSAFNEMIRRLCECGNA-KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           ++P    +N +I +    G    Q + + +  +  G SP+    + LI  + K G +   
Sbjct: 91  VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 150

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           + L   +  + IS     Y ++IS LC+ G  +EA ++   M    ++P    Y +L+  
Sbjct: 151 ISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 207

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             + GN  +A  L +E+    L   T  L S
Sbjct: 208 FCKVGNFVRAKALVDEISELNLITHTILLSS 238


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 175/382 (45%), Gaps = 16/382 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG    ++S+N LI  + K  +    W  Y+ M E    P+ AT   ++++  K G 
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGD 588

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +  + + D++      P ++    ++  + +  ++EE + +L +M+   +  +   Y +
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +    K +  ++    +E +L  G   +  VY T I   C+ G  ++A  +M +ME  G
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   TFN L+ G      + ++LS    MM   + P+ + +N +IR L + G  K+ +
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             L+    +G  P++ TY+ LI G AK G ++  + +Y EM    + P    Y  LIS  
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG------IHLEKGNKAKALHLCE----- 362
              GK+ +A +  K M    + P    Y +++        H +     KA++L E     
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLL 888

Query: 363 -EMVSE-GLKP--STSYLCSAS 380
            EMV E G  P   T Y  SA+
Sbjct: 889 KEMVEEKGYIPCNQTIYWISAA 910



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 164/368 (44%), Gaps = 32/368 (8%)

Query: 26  FNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +N+LIH    +   +D V  IY  M+     P+   +  LI + CK G+L   + +L   
Sbjct: 96  WNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL--- 152

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +  S   +   ++I  + +    +E    L  M++  ++ DT++Y+ ++    K+ N 
Sbjct: 153 RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNF 212

Query: 145 --ESALV--------------------------VYEEMLKRGFSANSFVYTTFIGAYCEY 176
               ALV                           Y +M+  GF  +   +++ I   C+ 
Sbjct: 213 VRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKG 272

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           GK+ E   L++EME   + P   T+  L++   KA     +L+   QM+ R +      +
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 332

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
             ++  L + G+ ++A     + L+    PN +TY+ L+ G  K G++     +  +M  
Sbjct: 333 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           KS+ P +  Y+S+I+   + G LEEA    + M+  ++VP    Y +++    + G +  
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452

Query: 357 ALHLCEEM 364
           A+ L +EM
Sbjct: 453 AIELSKEM 460



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 168/385 (43%), Gaps = 65/385 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L  R  S+  +++NT+I  + +    D  ++    M++    P+  +  TLI   CK G 
Sbjct: 152 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 211

Query: 74  LQTYVDMLDRI------------------HG----------KRCSPMVIVNTSLILRIIQ 105
                 ++D I                  H               P V+  +S+I R+ +
Sbjct: 212 FVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 271

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
             ++ EG +LL+ M   ++  + + Y+ +V +  K      AL +Y +M+ RG   +  V
Sbjct: 272 GGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVV 331

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           YT  +    + G + EA               ++TF +L+E                   
Sbjct: 332 YTVLMDGLFKAGDLREA---------------EKTFKMLLED------------------ 358

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
               +P+   +  ++  LC+ G+   A  ++T  L+K   PN +TYS +I GY K+G ++
Sbjct: 359 --NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E + L  +ME +++ P    Y ++I  L + GK E A +  K M+   +     I ++LV
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476

Query: 346 GIHLEKGNKAKALH-LCEEMVSEGL 369
             HL++  + K +  L ++MVS+G+
Sbjct: 477 N-HLKRIGRIKEVKGLVKDMVSKGV 500



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 172/357 (48%), Gaps = 3/357 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG  + L+ +  L+  + K+       + ++ +LE+ + PN  T   L+  LCK G L +
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              ++ ++  K   P V+  +S+I   +++  +EE + LL++M  +N++ +   Y  ++ 
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K    E A+ + +EM   G   N+++    +      G+I+E   L+++M + G+  
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
               +  LI+   K    E +L++ E+M  R +     ++N +I  + + G    A+   
Sbjct: 503 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAY 561

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               +KG  P+  T++ ++    K+G+ + +LKL+ +M+   I P+L +   ++  LC+ 
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE-MVSEGLKPS 372
           GK+EEA      M    + P +  Y   +     K  +A A+    E ++S G+K S
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS-SKHKRADAIFKTHETLLSYGIKLS 677



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 10/221 (4%)

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           ++Y +M+  G S + F     I ++C+ G++  A  L++   N  +     T+N +I G 
Sbjct: 115 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGL 171

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            +    +E+  +  +M+   +LP   ++N +I   C+ GN  +A  +    +D+    N 
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL----VDEISELNL 227

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           IT++ L+  Y     I+E    Y +M      P +  ++S+I+ LC+ GK+ E     + 
Sbjct: 228 ITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE 284

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           M+  S+ P    Y +LV    +      AL L  +MV  G+
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 4/151 (2%)

Query: 229 LLPSCSAFNEMIRRLCECGNA-KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           ++P    +N +I +    G    Q + + +  +  G SP+    + LI  + K G +   
Sbjct: 89  VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           + L   +  + IS     Y ++IS LC+ G  +EA ++   M    ++P    Y +L+  
Sbjct: 149 ISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 205

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             + GN  +A  L +E+    L   T  L S
Sbjct: 206 FCKVGNFVRAKALVDEISELNLITHTILLSS 236


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 2/367 (0%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +++ G   SL ++N L++ +  S   +   ++++ M      P+  T   +I   C
Sbjct: 207 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 266

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G+LQ  ++    +  K   P  I   +LI     E   +  + L   M  + +     
Sbjct: 267 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 326

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +YSL++    K R    A  V+E M ++G  AN  +YT  I +Y + G +EEA  L + M
Sbjct: 327 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 386

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           +N G +P   T+++L+ G  K+ R+++ +   +   ++ +  +   +  +I  L + G  
Sbjct: 387 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 446

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           + A  +     +KG + +   Y+ +I   AK G+I + L L+  ME +    T+  +T L
Sbjct: 447 EDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTIL 506

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL-VGIHLEKGNKAKALHLCEEMVSEG 368
           I  L +  K EEA K++  M    + P V  + +L +G+ L  G  A+A  + +++   G
Sbjct: 507 IDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCL-CGKVARACKILDDLAPMG 565

Query: 369 LKPSTSY 375
           + P T++
Sbjct: 566 IIPETAF 572



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 8/331 (2%)

Query: 5   EVAFDVCRYL----EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           E  FD C  L    E+RG  +   S++ +I  + K  +    + +++ M +     N A 
Sbjct: 303 ERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAI 362

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI +  K G ++  + + +R+  +   P  +  + L+  + +  R+++GM L     
Sbjct: 363 YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 422

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +  + + Y+ ++    K   +E A  ++EEM ++G + +S+ Y   I A  ++GKI+
Sbjct: 423 NKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKID 482

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L   ME  G      TF +LI+G  K  + EE++ + ++M+ + + P+ ++F  + 
Sbjct: 483 QALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALA 542

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC CG   +A  +L      G  P E  +  +I    K   I+E  KL   +  +   
Sbjct: 543 IGLCLCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRIKEACKLADGIVDRGRE 601

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
                 T LI++L + G    +D   K+M S
Sbjct: 602 IPGRIRTVLINALRKAGN---SDLVIKLMHS 629



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 153/360 (42%), Gaps = 45/360 (12%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRN-----DLVWRIYQHMLENIRYPNEATIRTLISAL 68
           L+ RG  ++  + N+LI    KS  N     +L+W +++ M EN   P+  T   L++ L
Sbjct: 176 LKDRGLLMTESAANSLI----KSFGNLGLVEELLW-VWRRMKENGIDPSLYTYNFLVNGL 230

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
                +++   + + + G +  P  +    +I    +  ++++ M   + M  KN+  D 
Sbjct: 231 VNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDK 290

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           I Y  ++ A    R+ ++ L +Y EM +RG       Y+  IG  C+  K  EA  + + 
Sbjct: 291 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 350

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G +     +  LI+  +K   +EE++   E+M                        
Sbjct: 351 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK----------------------- 387

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
                       ++GF P+ +TYS L+ G  K G + + ++L+     K ++     Y S
Sbjct: 388 ------------NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 435

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI  L + G++E+A+  F+ M           Y +++    + G   +AL L   M  EG
Sbjct: 436 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 495



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 103/225 (45%)

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           +V+ E+  RG         + I ++   G +EE   + + M+  G+ P   T+N L+ G 
Sbjct: 171 LVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGL 230

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
             +  IE +    E M   K++P    +N MI+  C+ G  ++A         K   P++
Sbjct: 231 VNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDK 290

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           ITY  LI     E +    L LY EME + +     +Y+ +I  LC+  K  EA   F+ 
Sbjct: 291 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 350

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           M        V IY +L+  + + G+  +A+ L E M +EG +P  
Sbjct: 351 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDA 395



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           D+G    E   + LI  +   G ++E+L ++  M+   I P+L  Y  L++ L     +E
Sbjct: 178 DRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIE 237

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLCSA 379
            A+K F++M    +VP    Y  ++  + + G   KA+    +M  + +KP   +Y+   
Sbjct: 238 SAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLI 297

Query: 380 STC 382
             C
Sbjct: 298 QAC 300


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 150/310 (48%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF L  +S+ TLIH + K         + Q +   +   N     T+I  +CK   +   
Sbjct: 37  GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 96

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            D+   +  K  SP V+  ++LI       ++++ + L  +++ +N+  D   ++++V  
Sbjct: 97  FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 156

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K R ++    V+  M+K+G   +   Y + +  Y    ++  A  +   M   G+ P 
Sbjct: 157 FCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPD 216

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++N+LI G  K K+++++++   +M  + ++P+   +N +I  L + G    A  ++ 
Sbjct: 217 IRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVD 276

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              D+G  PN +TY+ +I    K  ++ + + L  + + + I P++  YT LI  LC+ G
Sbjct: 277 QMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGG 336

Query: 318 KLEEADKYFK 327
           +L++A   F+
Sbjct: 337 RLKDARNIFE 346



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 155/332 (46%), Gaps = 2/332 (0%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           +PN  T+ TLI  LC  GQ+       D++         +   +LI  + +       + 
Sbjct: 4   HPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALD 63

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL+R+  K +  + + Y+ ++Y   K +++  A  +Y EM+ +G S N   Y+  I  + 
Sbjct: 64  LLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 123

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             GK+++A  L  ++    +KP   TFN+L++G  K ++++E  +    MM + ++P   
Sbjct: 124 VVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVV 183

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N ++           A  +       G +P+  +Y+ LI G+ K  ++ + + L+ EM
Sbjct: 184 TYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 243

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             K+I P +  Y SLI  L + G++  A +    M    + P +  Y S++    +    
Sbjct: 244 HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQV 303

Query: 355 AKALHLCEEMVSEGLKPS--TSYLCSASTCRG 384
            KA+ L  +   +G++PS  T  +     C+G
Sbjct: 304 DKAIALITKFKDQGIQPSMYTYTILIDGLCKG 335



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 143/288 (49%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + ++ +   L+ + +NT+I+ + K    +  + +Y  M+     PN  T   LIS
Sbjct: 61  ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G+L+  +D+ ++I  +   P       L+    ++ +++EG  +   M+++ +I 
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 180

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ +V     ++ + +A  ++  M + G + +   Y   I  +C+  K+++A  L 
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM    + P   T+N LI+G +K+ RI  +L   +QM  R + P+   +N +I  L + 
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 300

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
               +A  ++T   D+G  P+  TY+ LI G  K G +++   ++ ++
Sbjct: 301 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 178/426 (41%), Gaps = 70/426 (16%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGF  S+ + N ++  + K+ R  LVW  ++ ML +   PN ++   LIS LC  G+L+ 
Sbjct: 134 RGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKK 193

Query: 77  YVDMLDRIHGKRCSPMVIVNTSL-----------------------------------IL 101
            V++L  +      P ++   +L                                   I 
Sbjct: 194 AVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFID 253

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            + +  R  +G ++LK+M  K +  + ++Y+ ++   VK   +  A  V+ EM++   S 
Sbjct: 254 SLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSP 313

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR-------- 213
           N   Y   I  YC  G  EEA  L+  ME   ++P + T   L+ G  K+ +        
Sbjct: 314 NLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL 373

Query: 214 ---------------------------IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
                                      ++E+     +M    + P    F+ +I   C+ 
Sbjct: 374 ERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKV 433

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN  +A  +++    +GF PN + +S LI    K G + E +K Y  M     +      
Sbjct: 434 GNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTC 493

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SL++SLC+ GKL EA+++   +    LVP    ++ ++  +   G+ + A  + ++M+S
Sbjct: 494 NSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMIS 553

Query: 367 EGLKPS 372
            G  PS
Sbjct: 554 CGHHPS 559



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 175/400 (43%), Gaps = 36/400 (9%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA  V   + +   S +LI++N LI+    +   +   R+   M  N   PNE TI TL+
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLL 357

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + L K  +     ++L+R    R S   I +T +I  + +   ++E   LL  M +  + 
Sbjct: 358 NGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVY 417

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI--------------- 170
            D I +S+++    K+ NL  A  V  ++ + GF  N+ +++T I               
Sbjct: 418 PDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKF 477

Query: 171 --------------------GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
                                + CE GK+ EA   +  +   GL P   TF+ +I G A 
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
                 + S  ++M+S    PS   +  +++ LC+  N  +A  +L        + + I+
Sbjct: 538 VGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS 597

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF-KIM 329
           Y+ LI   +K G + E ++L+ EM   +I P    YT ++S L + G+L  A  +  ++M
Sbjct: 598 YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +   L     +Y   +    + G    AL+L +EM  +GL
Sbjct: 658 QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGL 697



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 156/360 (43%), Gaps = 5/360 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S+NTLI+   K  +  +  R++  M+E    PN  T   LI+  C  G  +  + +LD 
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDV 340

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P  +   +L+  + +  + +    +L+R        + I++++++    +   
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGL 400

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A  +  EM K G   +   ++  I  +C+ G + +A  +M ++   G  P +  F+ 
Sbjct: 401 LDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST 460

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI    K   + E + +   M            N ++  LCE G   +A   L      G
Sbjct: 461 LIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN +T+  +I GYA  G+      ++ +M      P+   Y SL+  LC+     EA 
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 324 KYFKIMKSHSLVPGVDI--YESLVGIHLEKGNKAKALHLCEEMVSEGLKP-STSYLCSAS 380
           K  K  K H +   VD   Y +L+    + GN  +A+ L EEM+   + P S +Y C  S
Sbjct: 581 KLLK--KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 4/318 (1%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +L +FN L+H  ++       +++Y  M  +  +PN  T  +LI  LC  G L+  + ML
Sbjct: 735  NLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKML 794

Query: 82   DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM--LRKNMIHDTIAYSLIVYAKV 139
                 +  +   +    LI +  +   +++ + L   M   R ++  DT     +    V
Sbjct: 795  KMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDT--QKAVTDVLV 852

Query: 140  KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
            +    ++  V   EMLK+GF   S  Y T +   C  G I+ A  L  +M   G+   D 
Sbjct: 853  RRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDA 912

Query: 200  TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
                ++ G A   +IEE++   ++M+  K +P+ S F  ++   C+  N K+A+ +  L 
Sbjct: 913  AECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILM 972

Query: 260  LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
                   + + Y+ LI      G++   L  Y E++ K + P +  Y  L+S++     +
Sbjct: 973  EHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYV 1032

Query: 320  EEADKYFKIMKSHSLVPG 337
               +   K +    LV G
Sbjct: 1033 SRGEIVLKDLNDRGLVSG 1050



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/370 (19%), Positives = 161/370 (43%), Gaps = 7/370 (1%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++ + G   + ++F+ +I+           + ++  M+    +P+  T  +L+  LCKG 
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQ 574

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTS---LILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
                  +L ++H   C P+ +   S   LI+ I +   + E + L + M++ N++ D+ 
Sbjct: 575 NFWEARKLLKKLH---CIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRG-FSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            Y+ I+   ++   L  A +    ++++   + NS VYT FI    + G+ + A  L +E
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKE 691

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ME  GL       N + +G ++  ++  + S   +  ++ ++P+ + FN ++       +
Sbjct: 692 MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQD 751

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
                 +  L    GF PN +TY  LI G    G ++  +K+      +S +     +  
Sbjct: 752 IMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNM 811

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI   C+   L++       M+   +    D  +++  + + +           EM+ +G
Sbjct: 812 LIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKG 871

Query: 369 LKPSTSYLCS 378
             P++   C+
Sbjct: 872 FIPTSKQYCT 881



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 98/213 (46%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           S+N  V+   I  Y   G +  A      M   G KP   T N+++    K  R      
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + +QM++ ++ P+ S+FN +I  LC  G  K+A  +LT+    G+ P  ++Y+ L+    
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+G  +  L L + ME K I   +  Y   I SLC+  +  +     K M++  + P   
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +L+   +++G    A  +  EM+   L P+
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/358 (20%), Positives = 140/358 (39%), Gaps = 39/358 (10%)

Query: 55  YP----NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE 110
           YP    N A    LI    + G +   V+    +  +   P V     ++  +++  R  
Sbjct: 98  YPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAH 157

Query: 111 EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI 170
                 K+ML   +  +  ++++++        L+ A+ +   M + G+      Y T +
Sbjct: 158 LVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLL 217

Query: 171 GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
              C+ G+ + A  L+  ME  G++    T+N+ I+   +  R  +     ++M ++ + 
Sbjct: 218 SWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMIT 277

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P+  ++N +I    + G    A  +    ++   SPN ITY+ LI GY   G  +E L+L
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRL 337

Query: 291 YYEMEYKSISP-----------------------------------TLPAYTSLISSLCQ 315
              ME   + P                                      ++T +I  LC+
Sbjct: 338 LDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCR 397

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G L+EA +    M    + P +  +  L+    + GN  KA  +  ++  EG  P+ 
Sbjct: 398 NGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNN 455


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 171/370 (46%), Gaps = 16/370 (4%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           +++++GF +++I FN ++H + K+D  +   + ++ +L++ + PN  T    +  LCK G
Sbjct: 203 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 262

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           ++     +L  +   + +P VI  +S+I    +  R+++   +  RM+    I   + + 
Sbjct: 263 KVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 322

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            +++   + +    A  V+E+M+  GF      Y   +   C    +E A  +  +M+  
Sbjct: 323 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 382

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             +P   T+  LI+   +A+R++E+  + + M +  ++P+ +  + ++  LC+ G   +A
Sbjct: 383 KRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 442

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L   ++                  K GE  E +++  +M  K + P    Y +++ S
Sbjct: 443 CSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRS 486

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC   +++ A   F+ M S    PG+  Y  L+G          A  + E MV+ G  P 
Sbjct: 487 LCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQ 546

Query: 373 TSYLCSASTC 382
              + + S+C
Sbjct: 547 AQTMRTLSSC 556



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 180/382 (47%), Gaps = 19/382 (4%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           RY    G    +IS++T+I  + K+ R D  +  ++ M      PN  T  +LI  LCK 
Sbjct: 97  RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKV 156

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            ++     +L ++ G+   P  +   +++    ++ +  E + LL  M  K    + I +
Sbjct: 157 DRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDF 216

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +++A  K    E A   +E +LK G   N   Y   +   C+ GK++EA  ++ EM  
Sbjct: 217 NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVE 276

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + + P   T++ +I+G  KA R++++     +MM  + +P    F  ++    E   +++
Sbjct: 277 SKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSRE 336

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    ++ GF P   TY+ L+        ++  L++Y++M+ K   P    Y  LI 
Sbjct: 337 AFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQ 396

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK-------------------G 352
            LC+  +++EA ++  +M++ ++VP   I  +LV +  ++                   G
Sbjct: 397 CLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAG 456

Query: 353 NKAKALHLCEEMVSEGLKPSTS 374
              +A+ + E+MV +G++P  +
Sbjct: 457 EPDEAVEVIEQMVLKGVRPDEA 478



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 152/349 (43%), Gaps = 39/349 (11%)

Query: 63  TLISALCKGGQLQTYVDMLDRIH----------------------------------GKR 88
           T+I+  CK GQ+    ++LD +                                   G+ 
Sbjct: 4   TVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE 63

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIH----DTIAYSLIVYAKVKMRN 143
           CSP VI   +++  + +  RI+EG+ L   M ++    H    D I+YS ++ A  K + 
Sbjct: 64  CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 123

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A   ++ M   G + N   Y++ I   C+  +++EA  L+ +++   + P    +N 
Sbjct: 124 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNA 183

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++ G  +  +  E L     M  +    +   FN M+  L +    ++A       L  G
Sbjct: 184 VVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN +TY+  + G  K G++ E  ++  EM    ++P +  Y+S+I   C+ G++++AD
Sbjct: 244 KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 303

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F  M  H  +P    + +L+    E     +A  + E+MV+ G  P 
Sbjct: 304 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 352



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 163/375 (43%), Gaps = 10/375 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +++RG  + ++  +TLI  + +  R D     ++ M E    PN  T  T+++
Sbjct: 18  AFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS-PNVITYNTVVN 76

Query: 67  ALCKGGQLQTYVDMLDRI-------HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
            LCK  ++   +++ D +       HG  C P VI  +++I  + + +R+++     KRM
Sbjct: 77  GLCKANRIDEGLELFDDMEKRYEASHG--CEPDVISYSTVIDALCKAQRVDKAYEYFKRM 134

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
                  + + YS ++    K+  ++ A  +  ++        +  Y   +  +   GK 
Sbjct: 135 RAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKP 194

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            E   L+  M+  G       FN ++    K    E++  + E+++     P+   +N  
Sbjct: 195 SECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVA 254

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           +  LC+ G   +A  +L   ++   +P+ ITYS +I G+ K G + +   ++  M     
Sbjct: 255 VHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 314

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    + +L+    +  K  EA +  + M +   +PG+  Y  L+       +   AL 
Sbjct: 315 IPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALE 374

Query: 360 LCEEMVSEGLKPSTS 374
           +  +M  +  +P  +
Sbjct: 375 IYHKMKRKKRQPDAN 389



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 10/250 (4%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ ++    K   ++ A  + +EM +RG   +  +++T I   C  G+I+EA   +++ +
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEA---LEQFK 58

Query: 191 NAG--LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-----KLLPSCSAFNEMIRRL 243
           + G    P   T+N ++ G  KA RI+E L   + M  R        P   +++ +I  L
Sbjct: 59  SMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A          G +PN +TYS LI G  K   + E   L  +++ + + P  
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRA 178

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y ++++   + GK  E  +    MK       +  + +++    +   + KA    E 
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 238

Query: 364 MVSEGLKPST 373
           ++  G KP+ 
Sbjct: 239 LLKSGKKPNV 248



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 12/213 (5%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           +YTT I  +C+ G++++A  L+ EM+  G+K      + LI+G  +  RI+E+L   +  
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKS- 59

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD--------KGFSPNEITYSHLIG 276
           M  +  P+   +N ++  LC+   A + +  L L  D         G  P+ I+YS +I 
Sbjct: 60  MGEECSPNVITYNTVVNGLCK---ANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVID 116

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K   + +  + +  M     +P +  Y+SLI  LC+  +++EA      +K   +VP
Sbjct: 117 ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVP 176

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
               Y ++V     +G  ++ L L   M  +G 
Sbjct: 177 RAMYYNAVVNGFKRQGKPSECLELLLHMKEKGF 209


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 139/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R+  ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGS 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++  L+    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   +  A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +L Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYVPSV 416



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   AL   + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIR 343



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R+   M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
           +MIH    + +I  AK      V  +   SA  V+ E+L  K   +++ +V++  I AY 
Sbjct: 18  SMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VVLAMEIYKQMLSQSLSPD 275


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 161/338 (47%), Gaps = 9/338 (2%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S  S N L+  +  ++R DL  R ++  L     P+  T   +IS LCK GQL+   D+ 
Sbjct: 149 SAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVA 208

Query: 82  DRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
             I     +P V+   ++I    +  +  R+     LLK M+   +  + + ++++V   
Sbjct: 209 KDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGY 268

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            K  N  +A+ V+EEM ++G +A+   Y+  +   C  GK+EE   L+ EM++ GL P  
Sbjct: 269 CKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNL 328

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI---RRLCECGNAKQANGM 255
            T N ++ G  K   + ++  + + M  + + P+   +  ++   RRL +  +A      
Sbjct: 329 ATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEA 388

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           ++    KG  PN   Y+ LI G+ + G+ + V  L  EM  K +   +  Y  LI +LC 
Sbjct: 389 MS---GKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCV 445

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
            G++ +A K    M    L P    Y +++  + EKGN
Sbjct: 446 KGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGN 483



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 133/323 (41%), Gaps = 40/323 (12%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P       L+  ++  ER++      K  LR+ +  D   +++++    K   L  A
Sbjct: 145 RHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKA 204

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCE---YGKIEEANCLMQEMENAGLKPYDETFNLL 204
             V +++   G + +   Y T I  YC+    G++   + L++EM  AG+ P + TFN+L
Sbjct: 205 GDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVL 264

Query: 205 IEG------------------------------------CAKAKRIEESLSYCEQMMSRK 228
           + G                                    C++ K +EE +   ++M    
Sbjct: 265 VNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGK-VEEGVKLVDEMKDLG 323

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           L+P+ +  N ++   C+ G    A G +     K   PN +TY+ L+ GY +  ++++ L
Sbjct: 324 LVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDAL 383

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            +   M  K + P    Y  LI+   + G           M+   +   +  Y  L+G  
Sbjct: 384 AVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGAL 443

Query: 349 LEKGNKAKALHLCEEMVSEGLKP 371
             KG   KA+ L +EM+  GL+P
Sbjct: 444 CVKGEVRKAVKLLDEMLMVGLEP 466



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 134/281 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   ++Q+G + S+++++ L+  +    + +   ++   M +    PN AT+ ++++
Sbjct: 277 AVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLN 336

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G +      +D +  K   P V+  T L+    + +++++ + + + M  K +  
Sbjct: 337 GFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRP 396

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ ++    +  +  S   + +EM  +G  A+   Y   IGA C  G++ +A  L+
Sbjct: 397 NARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLL 456

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   GL+P   T+N +I G  +   I+ +     +M   K   +   +N  I+ LC  
Sbjct: 457 DEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRM 516

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
           G  ++ N +L   L+KG  PN +TY  +  G  ++G   +V
Sbjct: 517 GKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDV 557



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 3/187 (1%)

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +P   + N L+     A+R++ +    +  + R++ P    FN +I  LC+ G  ++A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKE---GEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           +       G +P+ +TY+ +I GY K    G +  V  L  EM    ISP    +  L++
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+      A + F+ MK   +   V  Y +LV     +G   + + L +EM   GL P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 372 STSYLCS 378
           + + L S
Sbjct: 327 NLATLNS 333


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 177/383 (46%), Gaps = 20/383 (5%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +F+ A D     ++RGF   ++S N L++ + +  + D+   IY+H+      PN+ T  
Sbjct: 172 MFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYG 231

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             I ALC+ G  +  VD+   +     +P  +  ++ I  +   +R + G   L+ +   
Sbjct: 232 IFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAA 291

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N   DT AY+ ++        L+ A  V+ +M+  G + + ++Y   I AYC+ G + +A
Sbjct: 292 NWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQA 351

Query: 183 NCLMQEMENAGLKP---------------YDET-FNLLIEGCAKAKRIEESLSYCEQMMS 226
             L  +M + G+K                 DE  +N++++   K  ++EE++    +M  
Sbjct: 352 VALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKG 411

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           R++      +  +I   C  G    A  M     ++G  P+ +TY+ L+GG+++ G  +E
Sbjct: 412 RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKE 471

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            L+L   +  + + P    +  +I  LC  GK++EA+ +   ++   L    + Y ++V 
Sbjct: 472 ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL----ENYSAMVD 527

Query: 347 IHLEKGNKAKALHLCEEMVSEGL 369
            + +     KA  L   +  +G+
Sbjct: 528 GYCKANFTRKAYELFSRLSKQGI 550



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 187/425 (44%), Gaps = 57/425 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A DV R +E+ G + + ++ +T I  +    R+DL +   +  L    +P +    T
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALR-ALRAANWPIDTFAYT 301

Query: 64  -LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM--- 119
            +I   C   +L+   D+   +  +  +P   +  +LI    +   + + + L   M   
Sbjct: 302 AVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSN 361

Query: 120 -LRKNMIH------------DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
            ++ N++             D + Y+++V A  K+  +E A+ +  EM  R  S +   Y
Sbjct: 362 GIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHY 421

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
           TT I  YC  GK+ +A  + +EM+  G++P   T+N+L+ G ++    +E+L   + + +
Sbjct: 422 TTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGT 481

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK------------------------ 262
           + L P+ +  N +I  LC  G  K+A   L    DK                        
Sbjct: 482 QGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYEL 541

Query: 263 ---------------GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
                             PN+I Y  LIG + ++G+++    ++  +  + I+P +  YT
Sbjct: 542 FSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYT 601

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            +I+  C+   L EA   F  MK   + P V  Y  ++  H +  N   A++L +EM++ 
Sbjct: 602 MMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIAR 661

Query: 368 GLKPS 372
           GL+P 
Sbjct: 662 GLQPD 666



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 189/423 (44%), Gaps = 66/423 (15%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRI---YQHMLENIRYPNEATIR 62
           +A+     L++ GF  ++ ++  LI V+ +       WR+    Q +L  I    E+ + 
Sbjct: 79  LAWSFFTQLKESGFQHNVDTYAALIRVLCR-------WRLERKLQSLLSEIVGSKESVLG 131

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
             I+AL     L+     ++  H    S +++V   L+   ++    +E +  L +  R+
Sbjct: 132 FDITALFD--VLREGGGEVEGEHS---SVLILVLDMLVKAYVRVGMFDEAIDALFQTKRR 186

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             +   ++ + ++   ++   ++ A+ +Y  + + G + N + Y  FI A C  G  EEA
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEA 246

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE---ESL--------------------S 219
             + +EME AG+ P   T +  IEG    KR +   E+L                     
Sbjct: 247 VDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRG 306

Query: 220 YCEQ------------MMSRKLLPSCSAFNEMIRRLCECGNAKQA---------NGMLTL 258
           +C +            M++  + P    +  +I   C+ GN  QA         NG+ T 
Sbjct: 307 FCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTN 366

Query: 259 ALDK-------GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            +D+       G   +E+ Y+ ++    K G+++E ++L  EM+ + +S  +  YT+LI+
Sbjct: 367 LVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIA 426

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C  GKL +A   F+ MK   + P +  Y  LVG     G K +AL L + + ++GLKP
Sbjct: 427 GYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKP 486

Query: 372 STS 374
           +++
Sbjct: 487 NSA 489



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 147/299 (49%), Gaps = 12/299 (4%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           + +E     ++ ALCK G+++  V++L+ + G+R S  V+  T+LI     + ++ +   
Sbjct: 380 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN 439

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           + + M  + +  D + Y+++V    +    + AL + + +  +G   NS  +   I   C
Sbjct: 440 MFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLC 499

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL---- 230
             GK++EA   +  +E+  L    E ++ +++G  KA    ++     ++  + +L    
Sbjct: 500 MAGKVKEAEAFLNTLEDKCL----ENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLA 555

Query: 231 ----PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
               P+   + ++I   C  G+ K+A  +  + +++G +P+ ITY+ +I GY +   ++E
Sbjct: 556 LDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLRE 615

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              ++ +M+ + I P +  YT ++    +   L++A   +  M +  L P +  Y +L+
Sbjct: 616 ARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/250 (20%), Positives = 118/250 (47%), Gaps = 10/250 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG    ++++N L+   +++        +   +      PN AT   +I  LC  G+
Sbjct: 444 MKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGK 503

Query: 74  LQTYVDMLDRIHGK---RCSPMVI----VNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ++     L+ +  K     S MV      N +     +     ++G++   RML  ++  
Sbjct: 504 VKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGIL---RMLALDVEP 560

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y  ++ A  +  +++ A +V++ +++RG + +   YT  I  YC    + EA  + 
Sbjct: 561 NQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIF 620

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  G+KP   T+ ++++G +K   ++++++  ++M++R L P    +  ++   C  
Sbjct: 621 NDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNF 680

Query: 247 GNAKQANGML 256
           G+    N  L
Sbjct: 681 GSRHFDNQWL 690



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 61/133 (45%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN+     LI A C+ G ++    + D +  +  +P VI  T +I    +   + E   +
Sbjct: 560 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDI 619

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M  + +  D I Y++++    K  NL+ A+ +Y+EM+ RG   +   YT  +   C 
Sbjct: 620 FNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCN 679

Query: 176 YGKIEEANCLMQE 188
           +G     N  ++E
Sbjct: 680 FGSRHFDNQWLEE 692


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 171/359 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  GF   + +FNT ++++ + +R +    ++  M    R P+  +   +I ALC   +
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                 +  R+  K  SP      +L++ +    R++    L+  +++  +  +++ Y+ 
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +M  ++ A+ +   M + G   +   Y   +   CE G ++EA  L++ ME +G
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   ++N L++G  KA  ++ +     + M  K +    ++N +I   C+    ++  
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGY 349

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +      KG  P+ +T++ LI  + +EG    V KL  EM    + P    YT+++  L
Sbjct: 350 ELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHL 409

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ GK++ A   F+ M  + + P V  Y +L+    +      A+HL +EM S+GL P 
Sbjct: 410 CKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPD 468



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 153/343 (44%), Gaps = 2/343 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A  V R L  +G S    +   L+  +    R DL + +   +++     N      
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI   C+ G++   + +   +    C P ++    L+    +E  ++E + L++ M R  
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289

Query: 124 MIHDTIAYSLIVYAKVKMRNLESA-LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           +  D  +Y+ ++    K   ++ A L++ E M  +G   +   Y T I A+C+  +  + 
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRKG 348

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM   G++P   TFN+LI+   +           ++M   ++LP C  +  ++  
Sbjct: 349 YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDH 408

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G    A+ +    ++ G +P+ I+Y+ L+ G+ K   + + + L+ EM+ K + P 
Sbjct: 409 LCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPD 468

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              Y  ++  L +  K+  A + +  M          + E+LV
Sbjct: 469 EVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLV 511



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 7/320 (2%)

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR-ML 120
           R+ IS L K G +   + + D++    C    +     I  +++  R+       +R ++
Sbjct: 14  RSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVI 73

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYE---EMLKRGFSANSFVYTTFIGAYCEYG 177
            +        YS  + A     N  +  +++    +M   GF  + + + T++   C   
Sbjct: 74  PRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQN 133

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++E A  L   M + G  P   ++ ++I+    AKR +E+     +++ + L P   A  
Sbjct: 134 RLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACV 193

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  LC  G    A  ++   +  G   N + Y+ LI G+ + G + + +K+   M   
Sbjct: 194 ALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRT 253

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
              P L  Y  L++  C+ G ++EA +  + M+   + P +  Y  L+     K N    
Sbjct: 254 GCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLK-GFCKANMVDR 312

Query: 358 LHL--CEEMVSEGLKPSTSY 375
            HL   E M ++G+    SY
Sbjct: 313 AHLMMVERMQTKGMCDVVSY 332



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 71/156 (45%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    +++FN LI    +     +V ++   M +    P+      ++  LCK G++  
Sbjct: 358 KGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDV 417

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +   +     +P VI   +L+    +  R+ + M L   M  K +  D + Y LIV 
Sbjct: 418 AHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVG 477

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
             ++ + +  A  V+++M++RGF+ N  +  T + A
Sbjct: 478 GLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 181/391 (46%), Gaps = 24/391 (6%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
            RLFE +      + +   +  L SF+ +IHV+T + +  L   + + ++E +R  +E T
Sbjct: 92  FRLFETS-----SISRLSKTTDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLRRYSEPT 146

Query: 61  --IRTLISAL-----------------CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
                L +AL                  +  ++  + D L      RCSP      +++ 
Sbjct: 147 NISHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRCSPDSKACLAILN 206

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            +++  R +   V  + M+ + ++ D   YS++     K         + +EM   G   
Sbjct: 207 GLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKP 266

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           N ++YT +I   C   K+EEA  + + M+  G+ P   T++ +I+G  K   + ++    
Sbjct: 267 NVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLY 326

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           ++++  +LLP+   F  ++   C+      A  +    +  G  PN   Y+ LI G  K 
Sbjct: 327 KEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKS 386

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G + E + L  EME  ++SP +  YT LI+ LC   +L EA++ F+ MK+  + P    Y
Sbjct: 387 GNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTY 446

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            SL+    ++ N  KAL LC EM S G++P+
Sbjct: 447 NSLIHGFCKEYNIEKALDLCSEMTSSGVEPN 477



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 43/360 (11%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   +I   CK G L+    +   I      P V+V  +L+    +   +     L
Sbjct: 301 PNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSL 360

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M++  +  +   Y+ +++ + K  N+  A+ +  EM     S + F YT  I   C 
Sbjct: 361 FVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCT 420

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             ++ EAN L Q M+N  + P   T+N LI G  K   IE++L  C +M S  + P+   
Sbjct: 421 EERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIIT 480

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           F+ +I   C+  N K A G+      KG  P+ +TY+ LI  + KE  ++E L+LY +M 
Sbjct: 481 FSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDML 540

Query: 296 YKSISPT-------------------------------------------LPAYTSLISS 312
              I P                                               +T LI  
Sbjct: 541 EAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEG 600

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LCQ G +  A ++F  MKS  + P +  Y S++  HL +      + L  +M+  G+ P+
Sbjct: 601 LCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPN 660



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 166/372 (44%), Gaps = 3/372 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M LFE A  V R +     S + ++   +++ + +  R D VW  YQ M+     P+   
Sbjct: 179 MGLFEDALWVSREMRCSPDSKACLA---ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHI 235

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L     K G       +LD +      P V + T  I  + +E ++EE   + + M 
Sbjct: 236 YSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMK 295

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              ++ +   YS ++    K  NL  A  +Y+E+L      N  V+ T +  +C+  ++ 
Sbjct: 296 IHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELV 355

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L   M   G+ P    +N LI G  K+  + E++    +M S  L P    +  +I
Sbjct: 356 AARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILI 415

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC      +AN +     ++   P+ +TY+ LI G+ KE  I++ L L  EM    + 
Sbjct: 416 NGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVE 475

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  +++LI   C+   ++ A   +  M    +VP V  Y +L+  H ++ N  +AL L
Sbjct: 476 PNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRL 535

Query: 361 CEEMVSEGLKPS 372
             +M+  G+ P+
Sbjct: 536 YSDMLEAGIHPN 547



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/290 (20%), Positives = 119/290 (41%), Gaps = 27/290 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E    S  + ++  LI+ +   +R     R++Q M     +P+  T  +LI   CK   
Sbjct: 399 MESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYN 458

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  +D+   +      P +I  ++LI    +   I+  M L   M  K ++ D + Y+ 
Sbjct: 459 IEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTT 518

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K  N++ AL +Y +ML+ G   N   +   +  + + G++ +A     E   A 
Sbjct: 519 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQA- 577

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
                          A  K I +    C + +          F  +I  LC+ G   +A+
Sbjct: 578 ---------------ATGKSIVQ--RSCWKYV---------GFTCLIEGLCQNGYILRAS 611

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              +     G +P+  +Y  ++  + +E  I + + L+ +M    I P L
Sbjct: 612 RFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNL 661


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 166/372 (44%), Gaps = 45/372 (12%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISA 67
           D  R +E  G S ++I++NT+++   ++   D   R    M++++ + P+  T   LI A
Sbjct: 114 DAERVVEALGPSATIITYNTMVNGYCRAGNIDAARR----MIDSVPFAPDTFTYNPLIRA 169

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LC  G +   + + D +  + CSP V+                                 
Sbjct: 170 LCVRGCVLDALAVFDDMLHRGCSPSVVT-------------------------------- 197

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
              YS+++ A  K    + A+V+ +EM  +G   +   Y   I A C  G + EA  ++ 
Sbjct: 198 ---YSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLN 254

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            + + G KP   T+  +++    ++R EE+     +M S    P    FN +I  LC+ G
Sbjct: 255 SLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKG 314

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK----LYYEMEYKSISPTL 303
              +A  +L    + G +P+ ITYS ++ G  KE  + E +K    L  EM  K+  P  
Sbjct: 315 FVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQ 374

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA-KALHLCE 362
             + ++I+SLCQ G  + A K    M  H  +P +  Y  +V   L K  K  +AL L  
Sbjct: 375 VTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLN 434

Query: 363 EMVSEGLKPSTS 374
            MVS GL P T+
Sbjct: 435 LMVSNGLCPDTT 446



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 153/341 (44%), Gaps = 6/341 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            RG S S+++++ L+    K         +   M      P+  T   LI+A+C  G + 
Sbjct: 188 HRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVG 247

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +L+ +    C P  +  T ++  +   ER EE   LL +M   +   D + ++ ++
Sbjct: 248 EALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVI 307

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA----NCLMQEMEN 191
            +  +   +  A  V  +M + G + +   Y++ +   C+  +++EA      L+ EM +
Sbjct: 308 TSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVS 367

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR-LCECGNAK 250
               P   TFN +I    +    + ++   ++M     +P  + +N ++   LC+    +
Sbjct: 368 KNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTE 427

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +L L +  G  P+  TY  L  G ++E E++  + ++  ++   +SP    Y +++
Sbjct: 428 EALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAIL 487

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLE 350
             LC+  + + A  +F  M S+  +P    Y  LV GI  E
Sbjct: 488 LGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYE 528



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 5/289 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   L   G     +++  ++  +  S+R +   ++   M  N   P+E T   +I+
Sbjct: 249 ALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVIT 308

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR----MLRK 122
           +LC+ G +     +L ++    C+P +I  +S++  + +E R++E + LLK     M+ K
Sbjct: 309 SLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSK 368

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY-CEYGKIEE 181
           N I D + ++ I+ +  +    + A+ V +EM + G   +   Y   +  + C+  K EE
Sbjct: 369 NCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEE 428

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+  M + GL P   T+  L  G ++   +E ++    ++ +  L P    +N ++ 
Sbjct: 429 ALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILL 488

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
            LC+      A       +  G  P+E TY  L+ G A EG ++E  +L
Sbjct: 489 GLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKEL 537



 Score = 44.3 bits (103), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 1/167 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA-LCKGGQLQTYVDMLD 82
           ++FNT+I  + +    D   ++   M E+   P+  T   ++   LCK  + +  +D+L+
Sbjct: 375 VTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLN 434

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +      P      SL   + +E+ +E  + + +R+    +  D + Y+ I+    K  
Sbjct: 435 LMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKW 494

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
             + A+  +  M+  G   +   Y   +      G +EEA  L+  +
Sbjct: 495 RTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 162/370 (43%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 101 FWVPFDTCRKVLEHLMKLKYFK---------------LVWXFYKEILE-CGYPASLYFFN 144

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++  + + D I      P V+   +L+   I+   ++EG  L      K
Sbjct: 145 ILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL------K 198

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           + +H +                             G   + + Y+  I   C+  K+++A
Sbjct: 199 SAMHAS-----------------------------GVQPDVYTYSVLINGLCKESKMDDA 229

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM + GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 230 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYG 289

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA  ++     KG  P++I+Y+ LI G  KEG+++   +    M  ++I   
Sbjct: 290 LCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLD 349

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    +KG+      L +
Sbjct: 350 DVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLK 409

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 410 EMQRDGHVPS 419



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 149/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +   + + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 118 LKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVS 177

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +H     P V   + LI  + +E ++++   L   ML
Sbjct: 178 FNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ VY++ML +  S +   Y T I   C+ G ++
Sbjct: 238 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 297

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L+ EM   GLKP   ++  LI+GC K   +E +  + ++M+   +     A+  +I
Sbjct: 298 QAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALI 357

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++    KL  EM+     
Sbjct: 358 SGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHV 417

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 418 PSVVTYNVLMNG 429



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 22  TMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSGLITAYL 81

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + ++++      S 
Sbjct: 82  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWXFYKEILECGYPASL 140

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++++ L+ GY + G++ E  +L   
Sbjct: 141 YFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 200

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 201 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 260

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 261 VDLAMEVYKQMLSQSLSPD 279


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 167/368 (45%), Gaps = 3/368 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F +A  V   + + G+   +++ ++LI+   + +R      +   M E    P+     T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   CK G +   V++ DR+         +   SL+  +    R  +   L++ M+ ++
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + I ++ ++   VK      A+ +YEEM +R    + F Y + I   C +G+++EA 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M   G  P   T+N LI G  K+KR++E      +M  R L+     +N +I+  
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G    A  + +  +D    PN  TYS L+ G      +++ L L+  M+   I   +
Sbjct: 301 FQAGRPDAAQEIFS-RMDS--RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +I  +C+ G +E+A   F+ +    L P V  Y +++     K    K+  L  +
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 417

Query: 364 MVSEGLKP 371
           M  +GL P
Sbjct: 418 MQEDGLLP 425



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 157/343 (45%), Gaps = 3/343 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S++ F+ ++  + KS   DLV  ++ HM       +  +   +I+ LC+  +    + ++
Sbjct: 9   SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++      P V+  +SLI    Q  R+ + + L+ +M       D + Y+ I+    K+
Sbjct: 69  GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 128

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  A+ +++ M + G  A++  Y + +   C  G+  +A  LM++M    + P   TF
Sbjct: 129 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 188

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             +I+   K  +  E++   E+M  R + P    +N +I  LC  G   +A  ML L + 
Sbjct: 189 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 248

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P+ +TY+ LI G+ K   + E  KL+ EM  + +      Y ++I    Q G+ + 
Sbjct: 249 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 308

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           A + F  M S    P +  Y  L+          KAL L E M
Sbjct: 309 AQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM 348



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 164/370 (44%), Gaps = 3/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++   +  ++E  G    L S+N +I+ + +  R  +   +   M++    P+  T+ +
Sbjct: 26  YDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSS 85

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  C+G ++   +D++ ++      P V++  ++I    +   + + + L  RM R  
Sbjct: 86  LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 145

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ +V           A  +  +M+ R    N   +T  I  + + GK  EA 
Sbjct: 146 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 205

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L +EM    + P   T+N LI G     R++E+    + M+++  LP    +N +I   
Sbjct: 206 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 265

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +   +      +G   + ITY+ +I GY + G      +++  M+ +   P +
Sbjct: 266 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNI 322

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ L+  LC   ++E+A   F+ M+   +   +  Y  ++    + GN   A  L   
Sbjct: 323 RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRS 382

Query: 364 MVSEGLKPST 373
           +  +GLKP  
Sbjct: 383 LSCKGLKPDV 392



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 136/286 (47%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P ++  + ++ +I + +  +  + L   M    + HD  +Y++++    +      A
Sbjct: 5   RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 64

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L V  +M+K G+  +    ++ I  +C+  ++ +A  L+ +ME  G +P    +N +I+G
Sbjct: 65  LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 124

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K   + +++   ++M    +      +N ++  LC  G    A  ++   + +   PN
Sbjct: 125 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 184

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            IT++ +I  + KEG+  E +KLY EM  + + P +  Y SLI+ LC  G+++EA +   
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +M +   +P V  Y +L+    +     +   L  EM   GL   T
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 290


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 175/367 (47%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E RG   +++S+N ++    +    DL   ++ ++LE    PN  T   LI 
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMI 125
              +    Q  +++++ +         +V  ++I  + +  +  +   LL  M+  K + 
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              ++Y+ I+    K   ++SA+  YEEM   G S N   YT+ +   C+  ++++A  +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             EM+N G+K     +  LI+G  K   +E + +   +++   L PS   +N +I     
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            GN   A  +    L  G   +  TY+ LI G  K+G +    +LY EM+   + P    
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           YT +++ L + G+  +  K F+ MK +++ P V IY +++  H  +GN  +A  L +EM+
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821

Query: 366 SEGLKPS 372
            +G+ P 
Sbjct: 822 DKGILPD 828



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/404 (22%), Positives = 178/404 (44%), Gaps = 37/404 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A +  + +E  G + S+   +T+I    K  +++   +++    E     N     T+
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE-TGLANVFVCNTI 449

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +S LCK G+     ++L ++  +   P V+   +++L   +++ ++   ++   +L K +
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   YS+++    +  + ++AL V   M       N  VY T I   C+ G+  +A  
Sbjct: 510 KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 569

Query: 185 LMQ--------------------------EMENA----------GLKPYDETFNLLIEGC 208
           L+                           EM++A          G+ P   T+  L+ G 
Sbjct: 570 LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            K  R++++L   ++M ++ +     A+  +I   C+  N + A+ + +  L++G +P++
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
             Y+ LI G+   G +   L LY +M    +   L  YT+LI  L + G L  A + +  
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           M++  LVP   IY  +V    +KG   K + + EEM    + P+
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 36/353 (10%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMV 114
           P+       + A CK   L     +L  +  K+ C P     TS+IL  +++  +++ + 
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           L   ML   +  + +A + ++    K  +L SALV++++M K G S NS  ++  I  + 
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385

Query: 175 EYGKIEEANCLMQEMENAGLKP------------------------YDETF--------- 201
           + G++E+A    ++ME  GL P                        +DE+F         
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFV 445

Query: 202 -NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            N ++    K  + +E+     +M SR + P+  ++N ++   C   N   A  + +  L
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           +KG  PN  TYS LI G  +  + Q  L++   M   +I      Y ++I+ LC+ G+  
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565

Query: 321 EADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +A +    +++   L      Y S++    ++G    A+   EEM   G+ P+
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/395 (22%), Positives = 164/395 (41%), Gaps = 49/395 (12%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF ++  +FN L++  +K  + D    I   MLE    P    +   +SAL +   L   
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217

Query: 78  VDMLDR-----IHGKRCSPMVIVNTSLILRI-IQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            ++  R     + G        V T L++R  ++EE+  E + +L R + +    D++ Y
Sbjct: 218 KELYSRMVAIGVDGDN------VTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271

Query: 132 SL------------------------------------IVYAKVKMRNLESALVVYEEML 155
           SL                                    ++ A VK  N++ A+ + +EML
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
             G S N    T+ I  +C+   +  A  L  +ME  G  P   TF++LIE   K   +E
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           ++L + ++M    L PS    + +I+   +    ++A  +   + + G + N    + ++
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTIL 450

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
               K+G+  E  +L  +ME + I P + +Y +++   C+   ++ A   F  +    L 
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           P    Y  L+       ++  AL +   M S  ++
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 144/315 (45%), Gaps = 3/315 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLI 65
           A +V  ++      ++ + + T+I+ + K  +      +  +M+E  R   +  +  ++I
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
               K G++ + V   + + G   SP VI  TSL+  + +  R+++ + +   M  K + 
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D  AY  ++    K  N+ESA  ++ E+L+ G + +  +Y + I  +   G +  A  L
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            ++M   GL+    T+  LI+G  K   +  +     +M +  L+P    +  ++  L +
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G   +   M         +PN + Y+ +I G+ +EG + E  +L+ EM  K I P    
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831

Query: 306 YTSLISSLCQCGKLE 320
           +  L+S   Q G L+
Sbjct: 832 FDILVSG--QVGNLQ 844



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 152/352 (43%), Gaps = 35/352 (9%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           N      L++A  K  Q    VD+++++      P        +  ++Q   + E   L 
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
            RM+   +  D +   L++ A ++      AL V    ++RG   +S +Y+  + A C+ 
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281

Query: 177 GKIEEANCLMQEMENAGL-KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             +  AN L++EM+   L  P  ET+  +I    K   +++++   ++M+S  +  +  A
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
              +I   C+  +   A  +      +G SPN +T+S LI  + K GE+++ L+ Y +ME
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401

Query: 296 YKSISPTLPAYTSLI----------------------------------SSLCQCGKLEE 321
              ++P++    ++I                                  S LC+ GK +E
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDE 461

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A +    M+S  + P V  Y +++  H  + N   A  +   ++ +GLKP+ 
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 2/274 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E++   +S +S+N++I    K    D     Y+ M  N   PN  T  +L++ LCK  +
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   ++M D +  K     +    +LI    +   +E    L   +L + +      Y+ 
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     + N+ +AL +Y++MLK G   +   YTT I    + G +  A+ L  EM+  G
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P +  + +++ G +K  +  + +   E+M    + P+   +N +I      GN  +A 
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            +    LDKG  P+  T+  L+ G    G +Q V
Sbjct: 815 RLHDEMLDKGILPDGATFDILVSGQV--GNLQPV 846



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 1/248 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           A++ ++ A  K R  + A+ +  +ML+             + A  +   + EA  L   M
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
              G+   + T  LL+    + ++  E+L    + + R   P    ++  ++  C+  + 
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284

Query: 250 KQANGMLTLALDKGF-SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             AN +L    +K    P++ TY+ +I    K+G + + ++L  EM    IS  + A TS
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS 344

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI+  C+   L  A   F  M+     P    +  L+    + G   KAL   ++M   G
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404

Query: 369 LKPSTSYL 376
           L PS  ++
Sbjct: 405 LTPSVFHV 412



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 1/186 (0%)

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+   ++ G +     FN L+   +K ++ + ++    QM+   ++P     N  +  L 
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +  +  +A  + +  +  G   + +T   L+    +E +  E L++      +   P   
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSL-VPGVDIYESLVGIHLEKGNKAKALHLCEE 363
            Y+  + + C+   L  A+   + MK   L VP  + Y S++   +++GN   A+ L +E
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329

Query: 364 MVSEGL 369
           M+S+G+
Sbjct: 330 MLSDGI 335


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 169/374 (45%), Gaps = 4/374 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++RG S ++  +NT+I+ + K         +   M+ +   P+  T  TLI+A C+ G 
Sbjct: 372 MKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGD 431

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +L     +   P  +  T LI        +     LL  M+ +    D +    
Sbjct: 432 VEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGA 491

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++  V    ++ AL+V E+M +R    ++ +Y   I   C+   +  A  L+ EM    
Sbjct: 492 LIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQK 551

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P    +  LI+G  ++ ++ ++    E M  +       A+N MI+  C+ G   +A 
Sbjct: 552 VQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAV 611

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             ++     G  P+E TY+ LI GYAK+G+I+  L+   +M  +   P +  Y SLI   
Sbjct: 612 MCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGY 671

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C  G  + A+  F  M+S  L P V  Y  L+G   +K    +A    E M+     P+ 
Sbjct: 672 CNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPND 731

Query: 374 S---YLCSAST-CR 383
           +   YL +  T CR
Sbjct: 732 ATMHYLVNGLTNCR 745



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 147/317 (46%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T   +I  L +   L     +L  +  +  SP V +  ++I  + +     + + +
Sbjct: 344 PTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAV 403

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L +M+      D + ++ ++ A  +  ++E AL +  E ++R    N   YT  I  +C 
Sbjct: 404 LNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCV 463

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++  A+ L+ EM   G  P   T   LI G   + +++E+L   E+M  R+++P  + 
Sbjct: 464 RGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANI 523

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I  LC+      A  +L   L++   P++  Y+ LI G+ +  ++ +  K++  ME
Sbjct: 524 YNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFME 583

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K     + AY ++I   C+ G + EA      M+    +P    Y +L+  + +KG+  
Sbjct: 584 EKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIK 643

Query: 356 KALHLCEEMVSEGLKPS 372
            AL    +M+    KP+
Sbjct: 644 AALRFLCDMMKRRCKPN 660



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 165/404 (40%), Gaps = 50/404 (12%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           F   +++FNTLI    +    +   ++ +  +     PN+ +   LI   C  G++    
Sbjct: 412 FDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVAS 471

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
           D+L  + G+  +P V+   +LI  ++   +++E +++ ++M  + ++ D   Y++++   
Sbjct: 472 DLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGL 531

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA-------------------------- 172
            K R L +A  +  EML++    + FVYTT I                            
Sbjct: 532 CKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDI 591

Query: 173 ---------YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
                    YC+ G + EA   M  M   G  P + T+  LI+G AK   I+ +L +   
Sbjct: 592 VAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCD 651

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           MM R+  P+   +  +I   C  GN   A  +      +G  PN + Y+ LIG   K+ +
Sbjct: 652 MMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDK 711

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC---------GKLEEADK------YFKI 328
             +    +  M     SP       L++ L  C            ++A K       FK 
Sbjct: 712 AIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKG 771

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + S  L P +  Y +++          KA+ L E+M ++G  P 
Sbjct: 772 LISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPD 815



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 2/327 (0%)

Query: 44  RIYQHMLENIRYPNEATIRT--LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLIL 101
           R+Y  ML   R        T  ++  LC  G+++    +++   G+ C P  +    LI 
Sbjct: 260 RLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLID 319

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
              +   +  G++LL  M  K ++   + Y  I++   +  +L     +  EM +RG S 
Sbjct: 320 GYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSP 379

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           N  +Y T I A C+     +A  ++ +M  +   P   TFN LI    +   +EE+L   
Sbjct: 380 NVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLL 439

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
            + + R+L P+  ++  +I   C  G    A+ +L   + +G +P+ +T   LI G    
Sbjct: 440 REAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVS 499

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G++ E L +  +M  + + P    Y  LIS LC+   L  A      M    + P   +Y
Sbjct: 500 GQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVY 559

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEG 368
            +L+   +     + A  + E M  +G
Sbjct: 560 TTLIDGFIRSDKLSDARKIFEFMEEKG 586



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 125/267 (46%)

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           E R+EEG  L++    +  +   + Y++++    +  ++   L++  EM  +G       
Sbjct: 289 EGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVT 348

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   I        + +   L+ EM+  GL P  + +N +I    K +   ++L+   QM+
Sbjct: 349 YGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMV 408

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           + +  P    FN +I   C  G+ ++A  +L  A+ +   PN+++Y+ LI G+   GE+ 
Sbjct: 409 ASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVM 468

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
               L  EM  +  +P +    +LI  L   G+++EA    + M    ++P  +IY  L+
Sbjct: 469 VASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLI 528

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               +K   + A +L  EM+ + ++P 
Sbjct: 529 SGLCKKRMLSAAKNLLVEMLEQKVQPD 555



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 101/231 (43%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +E    + E     G    +  Y   I  YC  G +     L+ EME  G+ P   T+  
Sbjct: 292 VEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGA 351

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I    +   + +  S   +M  R L P+   +N +I  LC+C +A QA  +L   +   
Sbjct: 352 IIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASR 411

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           F P+ +T++ LI  + +EG+++E LKL  E   + + P   +YT LI   C  G++  A 
Sbjct: 412 FDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVAS 471

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
                M      P V    +L+   +  G   +AL + E+M    + P  +
Sbjct: 472 DLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDAN 522



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 148/355 (41%), Gaps = 15/355 (4%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA D+   +  RG +  +++   LIH +  S + D    + + M E    P+      LI
Sbjct: 469 VASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLI 528

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           S LCK   L    ++L  +  ++  P   V T+LI   I+ +++ +   + + M  K   
Sbjct: 529 SGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGY 588

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D +AY+ ++    K   +  A++    M K G   + F YTT I  Y + G I+ A   
Sbjct: 589 RDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRF 648

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + +M     KP   T+  LI G       + +      M S  L P+   +  +I  L +
Sbjct: 649 LCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFK 708

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA--KEGEIQE-------------VLKL 290
              A QA       L    SPN+ T  +L+ G    + G I               +L +
Sbjct: 709 KDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDV 768

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +  +    + P + AY ++I SLC+   L +A +  + M +   +P    + SL+
Sbjct: 769 FKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLL 823



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 15/273 (5%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           + TLI    +SD+     +I++ M E   Y +      +I   CK G +   V  +  + 
Sbjct: 559 YTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMR 618

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
              C P     T+LI    ++  I+  +  L  M+++    + + Y+ ++     + N +
Sbjct: 619 KVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTD 678

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           SA V++  M   G   N   YT  IG+  +  K  +A    + M      P D T + L+
Sbjct: 679 SAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLV 738

Query: 206 EG------------CA---KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            G            C+   +A +    L   + ++S  L P  SA+N +I  LC      
Sbjct: 739 NGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLG 798

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           +A  +     +KG  P+ +T+  L+ G++  G+
Sbjct: 799 KAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGK 831



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 2/234 (0%)

Query: 145 ESALVVYEEMLKRGFSANSFVYTT--FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           E A  +Y EML R     +  Y+T   +   C  G++EE   L++     G  P    +N
Sbjct: 256 ECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYN 315

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
           +LI+G  +   +   L    +M  + ++P+   +  +I  L    +  +   +L    ++
Sbjct: 316 VLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKER 375

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G SPN   Y+ +I    K     + L +  +M      P +  + +LI++ C+ G +EEA
Sbjct: 376 GLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            K  +      L P    Y  L+     +G    A  L  EM+  G  P    L
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTL 489



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/304 (20%), Positives = 117/304 (38%), Gaps = 28/304 (9%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++E++G    ++++N +I    KS   +        M +    P+E T  TLI    K G
Sbjct: 581 FMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG 640

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            ++  +  L  +  +RC P ++   SLI         +   VL   M  + +  + + Y+
Sbjct: 641 DIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYT 700

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY--CEYGKIEEANC------ 184
           +++ +  K      A   +E ML    S N       +     C YG I  +NC      
Sbjct: 701 VLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMIN-SNCSDTDQA 759

Query: 185 --------LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
                   + + + + GL P    +N +I    +   + +++   E+M ++  LP    F
Sbjct: 760 HKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTF 819

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEI----TYSHLIGGYAK---EGEIQEVLK 289
             ++      G +    G    AL   F  +E      Y  L+  +       E+  VL+
Sbjct: 820 LSLLYGFSSVGKS----GKWRSALPNEFQQDEFEIICKYMTLLNQHVMSPVRDEVSRVLQ 875

Query: 290 LYYE 293
           LY E
Sbjct: 876 LYAE 879


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 172/387 (44%), Gaps = 12/387 (3%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATI 61
           LF+ +  V   ++  G S S+++FN+L+ ++ K  R ++   ++  ML      P+  T 
Sbjct: 171 LFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTF 230

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   CK   +         +   +C P ++   +L+  + +  ++     ++  M++
Sbjct: 231 NILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVK 290

Query: 122 K--NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           K  N+  D + Y+ +V        ++ ALVV+EEM+ +G   N   Y T I   CE  KI
Sbjct: 291 KSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKI 350

Query: 180 EEANCLMQ-EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++   + +  +   G  P   T N L+     A  + ++L   E+MM   + P  + ++ 
Sbjct: 351 DKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSV 410

Query: 239 MIRRLCECGNAKQANGMLT-------LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +IR LC+ GN ++A  +         L  D G +P    Y  +     + G+  +  +++
Sbjct: 411 LIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVF 470

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            ++  +     L ++  LI   C+ G  E   +   +M     VP ++ Y+SL+   L+K
Sbjct: 471 RQLMKRGTQDPL-SFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQK 529

Query: 352 GNKAKALHLCEEMVSEGLKPSTSYLCS 378
           G    A    E+M+     P TS   S
Sbjct: 530 GEPLVAYQTLEKMIKSSHVPETSTFHS 556



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 174/387 (44%), Gaps = 22/387 (5%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR---- 62
           A     +  + GF+ +  S+  ++ ++ ++ RN     + ++ L +I+  +  T++    
Sbjct: 102 ALQFFNWAPELGFTHNDQSYFLMLEILGRA-RN---LNVARNFLFSIKRRSNGTVKLEDR 157

Query: 63  ---TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
              +LI +  K G  Q  V + + +     SP V+   SL+L +++  R      +   M
Sbjct: 158 FFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEM 217

Query: 120 LRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           L    +  DT  +++++    K   ++     ++EM +     +   Y T +   C  GK
Sbjct: 218 LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGK 277

Query: 179 IEEANCLMQEM--ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           +  A+ ++  M  ++  L P   T+  L+ G      I+E+L   E+M+S+ L P+   +
Sbjct: 278 VNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITY 337

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           N +I+ LCE     +   +   AL  G F P+  T + L+  +   G + + L+++ +M 
Sbjct: 338 NTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMM 397

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFK-------IMKSHSLVPGVDIYESLVGIH 348
             ++ P    Y+ LI +LCQ G  E A++ F        +++     P V  Y+S+    
Sbjct: 398 VLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFL 457

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSY 375
              G  AKA  +  +++  G +   S+
Sbjct: 458 CRNGKTAKAERVFRQLMKRGTQDPLSF 484


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 167/368 (45%), Gaps = 3/368 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F +A  V   + + G+   +++ ++LI+   + +R      +   M E    P+     T
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I   CK G +   V++ DR+         +   SL+  +    R  +   L++ M+ ++
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ + I ++ ++   VK      A+ +YEEM +R    + F Y + I   C +G+++EA 
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++  M   G  P   T+N LI G  K+KR++E      +M  R L+     +N +I+  
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G    A  + +  +D    PN  TYS L+ G      +++ L L+  M+   I   +
Sbjct: 360 FQAGRPDAAQEIFS-RMDS--RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  +I  +C+ G +E+A   F+ +    L P V  Y +++     K    K+  L  +
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476

Query: 364 MVSEGLKP 371
           M  +GL P
Sbjct: 477 MQEDGLLP 484



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 162/354 (45%), Gaps = 4/354 (1%)

Query: 11  CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCK 70
           C+ ++ R    S++ F+ ++  + KS   DLV  ++ HM       +  +   +I+ LC+
Sbjct: 58  CKMIQSRPLP-SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 116

Query: 71  GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
             +    + ++ ++      P V+  +SLI    Q  R+ + + L+ +M       D + 
Sbjct: 117 CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 176

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y+ I+    K+  +  A+ +++ M + G  A++  Y + +   C  G+  +A  LM++M 
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
              + P   TF  +I+   K  +  E++   E+M  R + P    +N +I  LC  G   
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  ML L + KG  P+ +TY+ LI G+ K   + E  KL+ EM  + +      Y ++I
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
               Q G+ + A + F  M S    P +  Y  L+          KAL L E M
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM 407



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 164/370 (44%), Gaps = 3/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +++   +  ++E  G    L S+N +I+ + +  R  +   +   M++    P+  T+ +
Sbjct: 85  YDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSS 144

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  C+G ++   +D++ ++      P V++  ++I    +   + + + L  RM R  
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ +V           A  +  +M+ R    N   +T  I  + + GK  EA 
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L +EM    + P   T+N LI G     R++E+    + M+++  LP    +N +I   
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +   +      +G   + ITY+ +I GY + G      +++  M+ +   P +
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNI 381

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ L+  LC   ++E+A   F+ M+   +   +  Y  ++    + GN   A  L   
Sbjct: 382 RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRS 441

Query: 364 MVSEGLKPST 373
           +  +GLKP  
Sbjct: 442 LSCKGLKPDV 451



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 143/301 (47%)

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
            L+  +D+  ++   R  P ++  + ++ +I + +  +  + L   M    + HD  +Y+
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++    +      AL V  +M+K G+  +    ++ I  +C+  ++ +A  L+ +ME  
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P    +N +I+G  K   + +++   ++M    +      +N ++  LC  G    A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++   + +   PN IT++ +I  + KEG+  E +KLY EM  + + P +  Y SLI+ 
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC  G+++EA +   +M +   +P V  Y +L+    +     +   L  EM   GL   
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348

Query: 373 T 373
           T
Sbjct: 349 T 349


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
               QM+S+ L P    +N +I  LC+ G+ KQA  +      KG  P++ITY+ LI G 
Sbjct: 262 EIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGS 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y +ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L  EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYVPSV 416



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIR 343



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M +  +ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++     +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFS--ANSFVYTTFIGAYC 174
            MIH    + +I  AK      V  +   SA  V+  +L+   +  ++ +V++  I AY 
Sbjct: 18  TMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   +IE   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVIEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ +  +M+S+ L P 
Sbjct: 257 VDLAMEIYXQMLSQSLSPD 275


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 1/347 (0%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           NTLIH   +        R+  HM  +    +  T   L++A C+ GQ+      ++    
Sbjct: 200 NTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARH 259

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
             C+   +    +I   I+  R+ E   L +  + K  + D   Y+L++ A  K + LE 
Sbjct: 260 DGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEE 318

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           AL +++E  + G   + F Y+  + A+ + G+  +A  +   M+ AG  P    +N+LI 
Sbjct: 319 ALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLIS 378

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
              K  +++E+L   E M  + ++P C  +N +I  L  CG  ++A     +   +  SP
Sbjct: 379 CLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSP 438

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + +TY+ L+ G  K     E   L+ EM+     P L  + +LI +L + G++E+A +  
Sbjct: 439 DVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQS 498

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +      P   IY +L+      G   K   L ++M+     P +
Sbjct: 499 ARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDS 545



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 147/323 (45%), Gaps = 1/323 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + ++N LI  + KS + +    ++Q   +     +  T   L+ A  K G+    +++ 
Sbjct: 300 DVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVF 358

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +    C P  +V   LI  + ++ +++E + LL+ M RK ++ D   Y++++      
Sbjct: 359 YNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSC 418

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E A   +  M +R  S +   Y T +    +  + +EA  L  EM+     P   TF
Sbjct: 419 GRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTF 478

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI+  AKA R+E++L    +++     P+   +N +I   C  G   +   +    ++
Sbjct: 479 GTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIE 538

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
               P+ ITY+ L+ G+++ G     ++L  EM  +  +P L  Y  LI SL   G++E+
Sbjct: 539 CSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVED 598

Query: 322 ADKYFKIMKSHSLVPGVDIYESL 344
           A   FK M +    P +  Y +L
Sbjct: 599 AYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 151/355 (42%), Gaps = 1/355 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +LS +++N +I    +  R     ++++  +     P+  T   LI ALCK  QL+  
Sbjct: 261 GCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEA 319

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +            V   + L+    +  R  + + +   M +   + DT+ Y++++  
Sbjct: 320 LTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISC 379

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ AL + E+M ++G   +   Y   I      G+ E+A      M+     P 
Sbjct: 380 LGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPD 439

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+N L+ G  K +R +E+    ++M + K +P  + F  +I  L + G  + A     
Sbjct: 440 VVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSA 499

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             +  G +PN   Y+ LI G+ + G++ +  +L+ +M   S  P    YT L+    + G
Sbjct: 500 RLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRG 559

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
               A +  + M      P +  Y  L+      G    A  L +EM+++G  P 
Sbjct: 560 HTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPD 614



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 4/320 (1%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           +E T    I A  + G L   + MLD +  G  C P  +  T+ +  + +  R+E+ M L
Sbjct: 52  SEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTL 111

Query: 116 LKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF-SANSFVYTTFIGAY 173
              M    +   D +AY+ ++    K  + + AL ++  + + G    N+  + T +   
Sbjct: 112 FDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFL 171

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           C+  +  +A  + QEM  AGLK      N LI    +   + ++      M +       
Sbjct: 172 CKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDA 231

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             +  ++   C  G   +    + LA   G + + + Y+ +I G+ + G + E  +L+  
Sbjct: 232 FTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFES 291

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
              K   P +  Y  LI+ LC+  +LEEA   F+  +   +V  V  Y  L+    + G 
Sbjct: 292 TMTKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGR 350

Query: 354 KAKALHLCEEMVSEGLKPST 373
            AKAL +   M   G  P T
Sbjct: 351 AAKALEVFYNMQKAGCMPDT 370



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/268 (21%), Positives = 116/268 (43%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V   +++ G     + +N LI  + K  + D    + + M      P+  T   +I 
Sbjct: 354 ALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVID 413

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L   G+ +        +  ++ SP V+   +L+  + +  R +E   L   M     + 
Sbjct: 414 VLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMP 473

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   +  ++    K   +E AL     ++K G + NS++Y   I  +C  G++++   L 
Sbjct: 474 DLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELF 533

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           Q+M      P   T+ +L+ G ++      ++   ++M+     P+ + +N +IR L   
Sbjct: 534 QDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMA 593

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHL 274
           G  + A  +    + KGF+P+  TYS L
Sbjct: 594 GQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 99/201 (49%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A+     +++R  S  ++++NTL++ + K  R D    ++  M  N   P+  T  T
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 480

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  L K G+++  ++   R+     +P   +  +LI    +  ++++G  L + M+  +
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D+I Y+++V    +  +   A+ + +EM++ G +     Y   I +    G++E+A 
Sbjct: 541 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAY 600

Query: 184 CLMQEMENAGLKPYDETFNLL 204
            L +EM   G  P  +T++ L
Sbjct: 601 TLFKEMIAKGFNPDMQTYSAL 621


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 138/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+E+AN L +EM + GL P   TF  LI+G  K  R+  ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGS 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++        M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++E+   L + ML   ++ + + ++ ++    K   +  A+ +Y++ML +  S + 
Sbjct: 217 CKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYVPSV 416



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 122/241 (50%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +++++++ VK   +  A  V++ + K G   +   + T +  Y + G ++E   L   M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            +G++P   T+++LI G  K  ++E++    E+M+   L+P+   F  +I   C+ G   
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVX 258

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +    L +  SP+ ITY+ LI G  K+G++++   L  EM  K + P    YT+LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+ G LE A  Y K M   ++      Y +L+    ++G    A  +  EM+S GLK
Sbjct: 319 DGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 371 P 371
           P
Sbjct: 379 P 379



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+    + AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIR 343



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  +++   ++ + +      P  +  T+LI    +  R+   M + K+ML
Sbjct: 209 YSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFS--ANSFVYTTFIGAYC 174
            MIH    + +I  AK      V  +   SA  V+  +L+   +  ++ +V++  I AY 
Sbjct: 18  TMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYVFSGLIIAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+E+A++ F+ M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VXLAMEIYKQMLSQSLSPD 275


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 167/390 (42%), Gaps = 36/390 (9%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN L+ ++ +S+  D  W I+  +L++    N  +   +I+  C+ G       +L  +
Sbjct: 126 TFNNLLCLLIRSNYFDKAWWIFN-VLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVL 184

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                SP V++ T+LI    +   +     L  +M R  ++ +   YS+++    K    
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQ 244

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                +YE M + G   N++ Y   I  YC  G +++A  +  EM   G+     T+N+L
Sbjct: 245 REGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNIL 304

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  + K+  E++    ++    L P+   +N +I   C+ G    A  +       G 
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL 364

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS------------------------ 300
           SP  +TY+ LI GY+K   +   L L  EME + I+                        
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACE 424

Query: 301 -----------PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
                      P +  Y+ LI   C  G ++EA K FK +    L P   IY +++  + 
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYC 484

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           ++G+  +AL L  EMV  G+ P+ +  CS 
Sbjct: 485 KEGSSYRALRLLNEMVHSGMVPNVASFCST 514



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 144/355 (40%), Gaps = 39/355 (10%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           I  H+L +   P     ++LI  L  G    + +  L + H   CS    +  +++   +
Sbjct: 44  ILNHLLSSGMLPQA---QSLILRLISGRIPSSLMLQLTQAHFTSCSTYTPLYDAIVNAYV 100

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
                ++ +  L  M+ +     +  ++ ++   ++    + A  ++  +LK     N++
Sbjct: 101 HSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFN-VLKSKVVLNAY 159

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK------AKRI---- 214
            +   I   CE G       L+  +E  GL P    +  LI+GC K      AK +    
Sbjct: 160 SFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM 219

Query: 215 -------------------------EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
                                     E     E M    ++P+  A+N +I   C  G  
Sbjct: 220 DRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMV 279

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +     +KG +   +TY+ LIGG  +  +  E +KL +++    +SP +  Y  L
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           I+  C  GK++ A + F  +KS  L P +  Y +L+  + +  N A AL L +EM
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 3/222 (1%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
           +Y   + AY      ++A   +  M + G  P   TFN L+    ++   +++  +   +
Sbjct: 91  LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAW-WIFNV 149

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +  K++ +  +F  MI   CE G   +   +L +  + G SPN + Y+ LI G  K G++
Sbjct: 150 LKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDV 209

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
                L+ +M+   + P    Y+ L++   + G   E  + ++ M    +VP    Y  L
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCL 269

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS--TSYLCSASTCRG 384
           +  +   G   KA  +  EM  +G+     T  +     CRG
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 175/386 (45%), Gaps = 13/386 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++ + + ++     ++++N LI+ + K  + +     +  M +    P+ AT  T+I+
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMIN 444

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G L   + +L+ +      P  I    L+ R+     IE+ M LL  ML      
Sbjct: 445 AYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHP 504

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               +  ++ A  K R  +  L ++++++  G   +   Y T I  +C  G I  A  + 
Sbjct: 505 TPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVF 564

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   G+     T+N LI G   +  ++++ +   QM++  + P+   +N ++  L   
Sbjct: 565 KDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAA 624

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+A G++    ++G  PN  TY  L+ G+ K G ++E +KLY EM  K   P    Y
Sbjct: 625 RLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTY 684

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV------------GIHLEKGNK 354
             LIS   +  K+ +A +  + M+   + P    Y+ L+               L++  +
Sbjct: 685 NVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQ 744

Query: 355 AKALHLCEEMVSEGLKPSTSYLCSAS 380
           A+A  L EEM  +G  P  + L   S
Sbjct: 745 AEAKRLFEEMNEKGFIPCENTLACIS 770



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 167/357 (46%), Gaps = 7/357 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG    ++ +  L+  + K+   +    ++Q +LE    PN  T   LI   CK G +  
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L  +  K   P VIV +S++    ++  + E M ++++M+++N++ +   Y  ++ 
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K      AL +++EM  RG   N+FV  +F+      G++EEA+ L ++M + GL P
Sbjct: 306 GYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN--- 253
               +  +++G  KA +  ++ +  ++M  +       A+N +I  L + G  +  +   
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           GM  L    G +P+  T++ +I  Y KEG +   LKL  EM+   + P       L+  L
Sbjct: 426 GMRQL----GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C  G++E+       M      P    +++++    +       LH+ +++V  G+K
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVK 538



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 174/406 (42%), Gaps = 36/406 (8%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A DV R + QR    ++  + TLI    K+D+  +   +++ M       N   I 
Sbjct: 277 LLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           + ++ L + G+++   ++   +  +   P  +  TS++    +  +  +   + + M  K
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           +   D +AY++++    K+   ES    +  M + G + +S  + T I AYC+ G +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS---------- 232
             L+ EM++ GLKP   T N+L++    A  IE+++     M+     P+          
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 233 -------------------------CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                                     S +N +I   C  G  ++A  +    + KG   +
Sbjct: 516 SSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            ITY+ LI GY     +++   ++ +M  + +SP +  Y  L+  L     ++EA     
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVN 635

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            MK   LVP    Y+ LV  H + GN  + + L  EM+++G  P T
Sbjct: 636 QMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKT 681



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 35/381 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+  FN LI    ++        + + M      P+  T  TL++  CK G L T   ++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             I      P VI  T+LI    + + +E+ + +   M  K+++ D + Y+ I+    K 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +E A  V+ EM + G   N F Y T I +  + G + EA  L   M   G+      +
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             L++G  KA     +    + ++   L+P+C  ++ +I   C+ G+  +   +L    +
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI----------- 310
           K   PN I YS ++ GY K+G + E + +  +M  ++I P +  Y +LI           
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 311 ------------------------SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
                                   ++L + G++EEAD+ FK M S  L+P    Y S++ 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 347 IHLEKGNKAKALHLCEEMVSE 367
              + G ++ A ++ +EM  +
Sbjct: 376 GFFKAGKESDAFNIAQEMTEK 396



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 154/359 (42%), Gaps = 1/359 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E++    ++I +++++   TK    +    + + M++    PN     TLI    K  Q
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               +D+   +  +       V  S +  + +  R+EE   L K M+ + ++ D + Y+ 
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K      A  + +EM ++    +   Y   I    + GK  E+      M   G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   TFN +I    K   +  +L    +M S  L P+    N +++RLC  G  ++  
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   L  GF P   T+  ++   +K      +L ++ ++    +   L  Y +LIS+ 
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G +  A   FK M    ++  +  Y +L+  +    +  KA  +  +M++EG+ P+
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 35/297 (11%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I   + LL+ M  +    D + Y+ ++    K+ +L +A  +  E+       N   YTT
Sbjct: 33  ISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTT 92

Query: 169 FIGAY-----------------------------------CEYGKIEEANCLMQEMENAG 193
            I AY                                   C+ GK+EEA  + +EME  G
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++  LI+   K   + E+     +M+ R +      +  ++  L + G A  A 
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M  + L++   PN +TYS LI G+ K G++ +   L  EME K I P +  Y+S++   
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            + G L EA    + M   +++P V +Y +L+  + +   +  AL L +EM S GL+
Sbjct: 273 TKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 110/229 (48%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A+ + E M   G + +   Y T +  +C+ G +  A  LM E+    L+P   T+  
Sbjct: 33  ISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTT 92

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+   K++ +E++L   ++M  + L+P    +  ++  LC+ G  ++A  +     + G
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN  +Y+ LI    KEG + E   L   M  + I   +  YT+L+  L + G    A+
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F+++   SLVP    Y +L+  H + G+  K   L +EM  + + P+
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 2/355 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L ++N +I ++ K+ + +    +   M +   +PN  T+  ++  LCK  +L     + 
Sbjct: 408 NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIF 467

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  K C P  +   SLI  + +  R++E   L ++ML  N I + + Y+ ++    K 
Sbjct: 468 EGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKC 527

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E    +Y EML+ G S +  +  T++    + G+IE+   L QE++N G  P   ++
Sbjct: 528 GRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSY 587

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            +LI G  KA    E+      M  +  +    A+N +I   C+ G   +A  +L     
Sbjct: 588 TILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 647

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P  +TY  +I G AK   + E   L+ E + K I   +  Y+SLI    + G+++E
Sbjct: 648 KGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDE 707

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           A    + +    L P V  +  L+   ++    ++AL   + M  + LK + +Y+
Sbjct: 708 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM--KDLKCTPNYI 760



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 181/370 (48%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ +     ++G   S++S+N ++  + +  + D   + ++ M ++   PN +T   
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNI 414

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LCK G+L+T + + D +      P VI    ++ R+ + +R+++   + + +  K 
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y  ++    +   ++ A  +YE+ML      N+ VYT+ I  + + G+ E+ +
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  EM   G  P     N  ++   KA  IE+  +  +++ +   +P   ++  +I  L
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A +A  +     ++G   +   Y+ +I G+ K G++ +  +L  EM+ K   PT+
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS  +   V IY SL+    + G   +A  + EE
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714

Query: 364 MVSEGLKPST 373
           ++ +GL P+ 
Sbjct: 715 LMQKGLTPNV 724



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 169/345 (48%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ +LI  + +  R D  +++Y+ ML+  + PN     +LI    K G+ +    + + 
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNE 539

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    CSP +++  + +  + +   IE+G  L + +     I D  +Y+++++  VK   
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              A  ++  M ++G   ++  Y T I  +C+ GK+ +A  L++EM+  G +P   T+  
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G AK  R++E+    E+  S+ +  +   ++ +I    + G   +A  ++   + KG
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +PN  T++ L+    K  EI E L  +  M+    +P    Y+ LI  LC+  K  +A 
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            +++ M+     P V  Y +++    + GN  +A  L E+   +G
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG 824



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 166/381 (43%), Gaps = 1/381 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R    AF   + + +  F  +  ++  LI  ++ S  +D +  ++Q M E     N    
Sbjct: 179 RKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLF 238

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI    + G++   + +LD +      P V++    I    +  +++        M  
Sbjct: 239 TTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKA 298

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D + Y+ ++    K   L  A+ ++E M +      ++ Y T I  Y   GK E+
Sbjct: 299 NGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFED 358

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++     G  P   ++N ++    +  +++E+L   E+M  +  +P+ S +N MI 
Sbjct: 359 AYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMID 417

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G  + A  +     D G  PN IT + ++    K   + +   ++  +++K+  P
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y SLI  L + G+++EA K ++ M   + +P   +Y SL+    + G K     + 
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 362 EEMVSEGLKPSTSYLCSASTC 382
            EM+  G  P    L +   C
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDC 558



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 139/305 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF     S+  LIH + K+      + ++  M E     +     T+I   CK G++   
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L+ +  K   P V+   S+I  + + +R++E  +L +    K +  + + YS ++  
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A ++ EE++++G + N + +   + A  +  +I EA    Q M++    P 
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI G  K ++  ++  + ++M  +   P+   +  MI  L + GN  +A+ +  
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG   +   Y+ +I G +      +  +L+ E   K  S        L+ SL +  
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAE 878

Query: 318 KLEEA 322
            +E+A
Sbjct: 879 CIEQA 883



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 1/314 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N+L+ V+ ++ + + + +I + M      P+  T   ++ +  K  +L+     +  +
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +  P     T+LI  +      +  + L ++M       +   ++ ++    +   +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           ++AL + +EM       +  +Y   I  + + GK++ A     EM+  GL   D T+  +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    KA R+ E++   E M   K +P   A+N MI      G  + A  +L     KG 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ ++Y+ ++    ++G++ E LK + EM+  +I P L  Y  +I  LC+ GKLE A  
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 325 YFKIMKSHSLVPGV 338
               MK   L P V
Sbjct: 431 VRDAMKDAGLFPNV 444



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 4/232 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++ +G   +++++ ++I  + K DR D  + +++         N     +LI 
Sbjct: 638 AYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLID 697

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +++ +  K  +P V     L+  +++ E I E +V  + M       
Sbjct: 698 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP 757

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS++++   K+R    A V ++EM K+GF  N F YTT I    + G I EA+ L 
Sbjct: 758 NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++ +  G       +N +IEG + A R  ++    E+      L  CS + +
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR----LKGCSIYTK 865



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 119/259 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   ++++G  L   ++NT+I    KS + +  +++ + M      P   T  ++I 
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  +L     + +    K     V++ +SLI    +  RI+E  ++++ +++K +  
Sbjct: 663 GLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   ++ ++ A VK   +  ALV ++ M     + N   Y+  I   C+  K  +A    
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM+  G KP   T+  +I G AKA  I E+ +  E+   +  +   + +N +I  L   
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842

Query: 247 GNAKQANGMLTLALDKGFS 265
             A  A  +   A  KG S
Sbjct: 843 NRASDAYRLFEEARLKGCS 861



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 2/256 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ ++    + R       + EEM   GF  ++      + ++ +  K+ EA   +Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
                +P    +  LI   + ++  +  L+  +QM       +   F  +IR     G  
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +L         P+ + Y+  I  + K G++    K ++EM+   +      YTS+
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+  +L EA + F+ M  +  VP    Y +++  +   G    A  L E    +G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 370 KPS-TSYLCSASTCRG 384
            PS  SY C  S C G
Sbjct: 372 IPSVVSYNCILS-CLG 386


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 2/355 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L ++N +I ++ K+ + +    +   M +   +PN  T+  ++  LCK  +L     + 
Sbjct: 408 NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIF 467

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  K C P  +   SLI  + +  R++E   L ++ML  N I + + Y+ ++    K 
Sbjct: 468 EGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKC 527

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E    +Y EML+ G S +  +  T++    + G+IE+   L QE++N G  P   ++
Sbjct: 528 GRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSY 587

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            +LI G  KA    E+      M  +  +    A+N +I   C+ G   +A  +L     
Sbjct: 588 TILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 647

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  P  +TY  +I G AK   + E   L+ E + K I   +  Y+SLI    + G+++E
Sbjct: 648 KGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDE 707

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           A    + +    L P V  +  L+   ++    ++AL   + M  + LK + +Y+
Sbjct: 708 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM--KDLKCTPNYI 760



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 181/370 (48%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A+ +     ++G   S++S+N ++  + +  + D   + ++ M ++   PN +T   
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNI 414

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I  LCK G+L+T + + D +      P VI    ++ R+ + +R+++   + + +  K 
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y  ++    +   ++ A  +YE+ML      N+ VYT+ I  + + G+ E+ +
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +  EM   G  P     N  ++   KA  IE+  +  +++ +   +P   ++  +I  L
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A +A  +     ++G   +   Y+ +I G+ K G++ +  +L  EM+ K   PT+
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS  +   V IY SL+    + G   +A  + EE
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714

Query: 364 MVSEGLKPST 373
           ++ +GL P+ 
Sbjct: 715 LMQKGLTPNV 724



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 169/345 (48%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ +LI  + +  R D  +++Y+ ML+  + PN     +LI    K G+ +    + + 
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNE 539

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    CSP +++  + +  + +   IE+G  L + +     I D  +Y+++++  VK   
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              A  ++  M ++G   ++  Y T I  +C+ GK+ +A  L++EM+  G +P   T+  
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G AK  R++E+    E+  S+ +  +   ++ +I    + G   +A  ++   + KG
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +PN  T++ L+    K  EI E L  +  M+    +P    Y+ LI  LC+  K  +A 
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            +++ M+     P V  Y +++    + GN  +A  L E+   +G
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG 824



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 166/381 (43%), Gaps = 1/381 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R    AF   + + +  F  +  ++  LI  ++ S  +D +  ++Q M E     N    
Sbjct: 179 RKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLF 238

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TLI    + G++   + +LD +      P V++    I    +  +++        M  
Sbjct: 239 TTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKA 298

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D + Y+ ++    K   L  A+ ++E M +      ++ Y T I  Y   GK E+
Sbjct: 299 NGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFED 358

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++     G  P   ++N ++    +  +++E+L   E+M  +  +P+ S +N MI 
Sbjct: 359 AYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMID 417

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G  + A  +     D G  PN IT + ++    K   + +   ++  +++K+  P
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y SLI  L + G+++EA K ++ M   + +P   +Y SL+    + G K     + 
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 362 EEMVSEGLKPSTSYLCSASTC 382
            EM+  G  P    L +   C
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDC 558



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 139/305 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF     S+  LIH + K+      + ++  M E     +     T+I   CK G++   
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +L+ +  K   P V+   S+I  + + +R++E  +L +    K +  + + YS ++  
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  ++ A ++ EE++++G + N + +   + A  +  +I EA    Q M++    P 
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+++LI G  K ++  ++  + ++M  +   P+   +  MI  L + GN  +A+ +  
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              +KG   +   Y+ +I G +      +  +L+ E   K  S        L+ SL +  
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAE 878

Query: 318 KLEEA 322
            +E+A
Sbjct: 879 CIEQA 883



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 1/314 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N+L+ V+ ++ + + + +I + M      P+  T   ++ +  K  +L+     +  +
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
              +  P     T+LI  +      +  + L ++M       +   ++ ++    +   +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           ++AL + +EM       +  +Y   I  + + GK++ A     EM+  GL   D T+  +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I    KA R+ E++   E M   K +P   A+N MI      G  + A  +L     KG 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+ ++Y+ ++    ++G++ E LK + EM+  +I P L  Y  +I  LC+ GKLE A  
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 325 YFKIMKSHSLVPGV 338
               MK   L P V
Sbjct: 431 VRDAMKDAGLFPNV 444



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 4/232 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++ +G   +++++ ++I  + K DR D  + +++         N     +LI 
Sbjct: 638 AYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLID 697

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +++ +  K  +P V     L+  +++ E I E +V  + M       
Sbjct: 698 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP 757

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS++++   K+R    A V ++EM K+GF  N F YTT I    + G I EA+ L 
Sbjct: 758 NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++ +  G       +N +IEG + A R  ++    E+      L  CS + +
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR----LKGCSIYTK 865



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 119/259 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   ++++G  L   ++NT+I    KS + +  +++ + M      P   T  ++I 
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  +L     + +    K     V++ +SLI    +  RI+E  ++++ +++K +  
Sbjct: 663 GLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 722

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   ++ ++ A VK   +  ALV ++ M     + N   Y+  I   C+  K  +A    
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           QEM+  G KP   T+  +I G AKA  I E+ +  E+   +  +   + +N +I  L   
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842

Query: 247 GNAKQANGMLTLALDKGFS 265
             A  A  +   A  KG S
Sbjct: 843 NRASDAYRLFEEARLKGCS 861



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 2/256 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ ++    + R       + EEM   GF  ++      + ++ +  K+ EA   +Q M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
                +P    +  LI   + ++  +  L+  +QM       +   F  +IR     G  
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
             A  +L         P+ + Y+  I  + K G++    K ++EM+   +      YTS+
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+  +L EA + F+ M  +  VP    Y +++  +   G    A  L E    +G 
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 370 KPS-TSYLCSASTCRG 384
            PS  SY C  S C G
Sbjct: 372 IPSVVSYNCILS-CLG 386


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 182/389 (46%), Gaps = 19/389 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G S  + ++N+LIH +        V  +   M+++   P+  +  T++ 
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G++    D++D++  +   P V+  T+L+        ++E + +   M+ K  + 
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339

Query: 127 DTIAYSLIVYAKVKMR-------------------NLESALVVYEEMLKRGFSANSFVYT 167
           + I+Y+ ++    K++                   N++ A+ V++ M+ +G   N   Y 
Sbjct: 340 NVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYN 399

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           T I  YC+  +I++A  L  EM    L P   T++ LI G    +R++++++   +M++ 
Sbjct: 400 TLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVAC 459

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             +P+   +  ++  LC+     +A  +L         P+    +  I G  + GE++  
Sbjct: 460 SQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAA 519

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
             L+  +  K + P +  Y+ +I+ LC+ G L+EA K F+ M  +       IY ++   
Sbjct: 520 RDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 579

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            L     ++A+ L +EMV+ G     S +
Sbjct: 580 FLRNNETSRAIQLLQEMVARGFSADASTM 608



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 165/371 (44%), Gaps = 19/371 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S + FN L+  + K   +  +  +   M      PN  T+  LI++ C   ++     +L
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVL 119

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            +I      P     T+LI  I  E +I E + L  +M+ +    D + Y  ++    K+
Sbjct: 120 AKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 179

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N  +A+ +   M+++    N F Y T I + C+  ++ EA  L  EM   G+ P   T+
Sbjct: 180 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 239

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI         +   +   +M+  K++P   +FN ++  LC+ G   +A+ ++   + 
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK--- 318
           +G  PN +TY+ L+ G+    E+ E +K++  M  K   P + +Y +LI+  C+  +   
Sbjct: 300 RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 359

Query: 319 ----------------LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
                           ++EA K F  M     +P V  Y +L+  + +     KA++L  
Sbjct: 360 AIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFG 419

Query: 363 EMVSEGLKPST 373
           EM  + L P T
Sbjct: 420 EMCRQELIPDT 430



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 121/264 (45%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I+  +    RMLR      T+ ++ ++ +  KM++  + L +  +M   G   N +    
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I ++C   ++  A  ++ ++   G +P   TF  LI G     +I E+L   ++M+   
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P    +  +I  LC+ GN   A  +L   + K   PN   Y+ +I    K+ ++ E  
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            L+ EM  K ISP +  Y SLI +LC   + +        M    ++P V  + ++V   
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            ++G   +A  + ++M+  G++P+
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPN 305



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/346 (20%), Positives = 146/346 (42%), Gaps = 10/346 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L    F    + FNT+   ++  +R          ML     P+      L++++ K   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNR----------MLRMQPPPSTVDFNKLLTSIAKMKH 76

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
             T + +  ++      P +     LI       R+     +L ++L+     DT  ++ 
Sbjct: 77  HSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTT 136

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        +  AL ++++M+  GF  +   Y T I   C+ G    A  L+  M    
Sbjct: 137 LIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN 196

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
            +P    +N +I+   K +++ E+ +   +M+++ + P    +N +I  LC     K   
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   +D    P+ ++++ ++    KEG++ E   +  +M  + + P +  YT+L+   
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           C   +++EA K F  M     +P V  Y +L+  + +     KA+H
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH 362



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 141/330 (42%), Gaps = 19/330 (5%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A DV   + QRG   +++++  L+         D   +++  M+     PN  +  TLI+
Sbjct: 290 AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLIN 349

Query: 67  ALCKGGQLQT-------------YVDM------LDRIHGKRCSPMVIVNTSLILRIIQEE 107
             CK  ++               Y++M       D +  K C P VI   +LI    + +
Sbjct: 350 GYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 409

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           RI++ M L   M R+ +I DT+ YS +++    +  L+ A+ ++ EM+      N   Y 
Sbjct: 410 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 469

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             +   C+   + EA  L++ +E + L P  +  N+ I+G  +A  +E +      + S+
Sbjct: 470 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 529

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            L P    ++ MI  LC  G   +A+ +     + G + N   Y+ +  G+ +  E    
Sbjct: 530 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 589

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           ++L  EM  +  S      T  +  L   G
Sbjct: 590 IQLLQEMVARGFSADASTMTLFVKMLSDDG 619



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 10/214 (4%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           F + S  + T  GA   + +       M  M+     P    FN L+   AK K     L
Sbjct: 32  FHSKSLHFNTIDGAISSFNR-------MLRMQPP---PSTVDFNKLLTSIAKMKHHSTLL 81

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S   QM S  + P+    + +I   C       A  +L   L  G  P+  T++ LI G 
Sbjct: 82  SLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGI 141

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
             EG+I E L L+ +M  +   P +  Y +LI+ LC+ G    A +    M   +  P V
Sbjct: 142 CVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 201

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y +++    +     +A +L  EMV++G+ P 
Sbjct: 202 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 235


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 169/372 (45%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E    + + +E  G   ++ +F   I V+ ++ + +  + I + M +    P+  T 
Sbjct: 239 RDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 298

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI ALC   +L    ++  ++   R  P  +   +L+ R      ++        M +
Sbjct: 299 TVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEK 358

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              + D + ++++V A  K  N   A    + M  +G   N   Y T I       ++++
Sbjct: 359 DGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 418

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +   ME+ G+KP   T+ + I+   K+     +L   E+M ++ + P+  A N  + 
Sbjct: 419 ALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 478

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L + G  ++A  +     D G  P+ +TY+ ++  Y+K GEI E +KL  EM      P
Sbjct: 479 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +    SLI++L +  +++EA K F  MK   L P V  Y +L+    + G   +A+ L 
Sbjct: 539 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598

Query: 362 EEMVSEGLKPST 373
           E MV +G  P+T
Sbjct: 599 EGMVQKGCPPNT 610



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 149/321 (46%), Gaps = 2/321 (0%)

Query: 56   PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
            P   T   LI  L +   ++   D+  ++    C P V     L+    +  +I+E   +
Sbjct: 785  PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844

Query: 116  LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML-KRGFSANSFVYTTFIGAYC 174
             K M       +TI +++++   VK  N++ AL +Y +++  R FS  +  Y   I    
Sbjct: 845  YKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 904

Query: 175  EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
            + G++ EA  L + M + G +P    +N+LI G  KA   + + +  ++M+   + P   
Sbjct: 905  KSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 964

Query: 235  AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             ++ ++  LC  G   +         + G +P+ + Y+ +I G  K   ++E L L+ EM
Sbjct: 965  TYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEM 1024

Query: 295  E-YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
            +  + I+P L  Y SLI +L   G +EEA K +  ++   L P V  + +L+  +   G 
Sbjct: 1025 KKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1084

Query: 354  KAKALHLCEEMVSEGLKPSTS 374
               A  + + MV+ G  P+T 
Sbjct: 1085 PEHAYAVYQTMVTGGFSPNTG 1105



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 2/309 (0%)

Query: 3    LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
            + E+A DV   ++  G    + ++N L+    KS + D ++ IY+ M  +   PN  T  
Sbjct: 802  MIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHN 861

Query: 63   TLISALCKGGQLQTYVDML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +IS L K G +   +D+  D +  +  SP       LI  + +  R+ E   L + M  
Sbjct: 862  IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSD 921

Query: 122  KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
                 +   Y++++    K    ++A  +++ M+K G   +   Y+  +   C  G+++E
Sbjct: 922  YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 981

Query: 182  ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMI 240
                 +E++ +GL P    +NL+I G  K  R+EE+L    +M  SR + P    +N +I
Sbjct: 982  GLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLI 1041

Query: 241  RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              L   G  ++A  +       G  PN  T++ LI GY+  G+ +    +Y  M     S
Sbjct: 1042 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1101

Query: 301  PTLPAYTSL 309
            P    Y  L
Sbjct: 1102 PNTGTYEQL 1110



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 167/367 (45%), Gaps = 2/367 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  AF     +  +G   +L ++NTLI  + +  R D    I+ +M      P   T   
Sbjct: 381 FGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIV 440

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
            I    K G   + ++  +++  K  +P ++   + +  + +  R  E   +   +    
Sbjct: 441 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 500

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D++ Y++++    K+  ++ A+ +  EM++     +  V  + I    +  +++EA 
Sbjct: 501 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAW 560

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M+   LKP   T+N L+ G  K  +I+E++   E M+ +   P+   FN +   L
Sbjct: 561 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 620

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+      A  ML   +D G  P+  TY+ +I G  K G+++E +  +++M+ K + P  
Sbjct: 621 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 679

Query: 304 PAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
               +L+  + + G +E+A K     + S +  P    +E L+G  L +     A+   E
Sbjct: 680 VTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSE 739

Query: 363 EMVSEGL 369
            +V+ G+
Sbjct: 740 RLVANGI 746



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 160/357 (44%), Gaps = 5/357 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ TL+   + +   D V + +  M ++   P+  T   L+ ALCK G        LD 
Sbjct: 331 VTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDV 390

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV--KM 141
           +  +   P +    +LI  +++  R+++ + +   M  +++     AY+ IV+     K 
Sbjct: 391 MRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNM--ESLGVKPTAYTYIVFIDYYGKS 448

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +  SAL  +E+M  +G + N       + +  + G+  EA  +   +++ GL P   T+
Sbjct: 449 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 508

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++++  +K   I+E++    +M+     P     N +I  L +     +A  M     +
Sbjct: 509 NMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 568

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
               P  +TY+ L+ G  K G+IQE ++L+  M  K   P    + +L   LC+  ++  
Sbjct: 569 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 628

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A K    M     VP V  Y +++   ++ G   +A+    +M  + + P    LC+
Sbjct: 629 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCT 684



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 163/390 (41%), Gaps = 40/390 (10%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +I  N+LI+ + K+DR D  W+++  M E    P   T  TL++ L K G++Q  +++ 
Sbjct: 539 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           + +  K C P  I   +L   + + + +   + +L +M+    + D   Y+ I++  VK 
Sbjct: 599 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDET 200
             ++ A+  + +M K+    +     T +    + G IE+A   +   + +   +P +  
Sbjct: 659 GQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLF 717

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLL-PSCSAFNEMIRRLCECGNAKQANGML-TL 258
           +  L+        I+ ++S+ E++++  +     S    +IR   +  NA  A  +    
Sbjct: 718 WEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKF 777

Query: 259 ALDKGFSPNEITYSHLIGG-----------------------------------YAKEGE 283
             D G  P   TY+ LIGG                                   Y K G+
Sbjct: 778 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGK 837

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYE 342
           I E+ ++Y EM      P    +  +IS L + G +++A D Y+ +M      P    Y 
Sbjct: 838 IDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 897

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            L+    + G   +A  L E M   G +P+
Sbjct: 898 PLIDGLSKSGRLYEAKQLFEGMSDYGCRPN 927



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 127/284 (44%), Gaps = 1/284 (0%)

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
             LI  +++     E M + +RM+          YS ++    K R++ES + + +EM  
Sbjct: 194 NGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMET 253

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G   N + +T  I      GKI EA  +++ M++ G  P   T+ +LI+    A++++ 
Sbjct: 254 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 313

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
           +     +M + +  P    +  ++ R  +  +    N   +     G  P+ +T++ L+ 
Sbjct: 314 AKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVD 373

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              K G   E       M  + I P L  Y +LI  L +  +L++A + F  M+S  + P
Sbjct: 374 ALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKP 433

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSAS 380
               Y   +  + + G+   AL   E+M ++G+ P+    C+AS
Sbjct: 434 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI-VACNAS 476



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/405 (19%), Positives = 174/405 (42%), Gaps = 39/405 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +    ++ +G + ++++ N  ++ + K+ R+    +I+  + +    P+  T   ++ 
Sbjct: 454 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 513

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++   + +L  +    C P VIV  SLI  + + +R++E   +  RM    +  
Sbjct: 514 CYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 573

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ ++    K   ++ A+ ++E M+++G   N+  + T     C+  ++  A  ++
Sbjct: 574 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 633

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR---------KLLPSC---- 233
            +M + G  P   T+N +I G  K  +++E++ +  QM             LLP      
Sbjct: 634 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAG 693

Query: 234 ---SAFNEMIRRLCECGNAKQAN----GMLTLALDKGFSPNEITYSH--LIGGYAKEGEI 284
               A+  +   L  C + + AN     ++   L +    N +++S   +  G  ++G+ 
Sbjct: 694 LIEDAYKIIANFLYSCAD-QPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDS 752

Query: 285 QEVLKLYYEMEYKSIS----------------PTLPAYTSLISSLCQCGKLEEADKYFKI 328
             V  + Y  ++ + S                P LP Y  LI  L +   +E A   F  
Sbjct: 753 ILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 812

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +K+   +P V  Y  L+  + + G   +   + +EM +   +P+T
Sbjct: 813 VKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNT 857



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 1/230 (0%)

Query: 14   LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
            +  R FS +  ++  LI  ++KS R     ++++ M +    PN A    LI+   K G+
Sbjct: 884  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943

Query: 74   LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                  +  R+  +   P +   + L+  +    R++EG+   + +    +  D + Y+L
Sbjct: 944  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNL 1003

Query: 134  IVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            I+    K   LE ALV++ EM K RG + + + Y + I      G +EEA  +  E++ A
Sbjct: 1004 IINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063

Query: 193  GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            GL+P   TFN LI G + + + E + +  + M++    P+   + ++  R
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1113



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 35/303 (11%)

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           + +IEE   +   M ++ +  DT  Y  I         L  A     +M + GF  N++ 
Sbjct: 133 DGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYS 192

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   I    +     EA  + + M   G +P  +T++ L+ G  K + IE  +   ++M 
Sbjct: 193 YNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEME 252

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG-------- 277
           +  L P+   F   IR L   G   +A  +L    D+G  P+ +TY+ LI          
Sbjct: 253 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 312

Query: 278 ---------------------------YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
                                      ++   ++  V + + EME     P +  +T L+
Sbjct: 313 CAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILV 372

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            +LC+ G   EA     +M+   ++P +  Y +L+   L       AL + + M S G+K
Sbjct: 373 DALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVK 432

Query: 371 PST 373
           P+ 
Sbjct: 433 PTA 435



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 104/251 (41%)

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           N++H T   + ++ A      +E    V++ M KR    ++  Y T        G + +A
Sbjct: 115 NLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQA 174

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
              +++M   G      ++N LI    K++   E++    +M+     PS   ++ ++  
Sbjct: 175 PFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVG 234

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L +  + +   G+L      G  PN  T++  I    + G+I E  ++   M+ +   P 
Sbjct: 235 LGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 294

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  YT LI +LC   KL+ A + F  MK+    P    Y +L+    +  +         
Sbjct: 295 VVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWS 354

Query: 363 EMVSEGLKPST 373
           EM  +G  P  
Sbjct: 355 EMEKDGHVPDV 365



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 2/184 (1%)

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-SCSAFNEMIRRLCECGNA 249
           N+ L    ET N ++E      +IEE ++Y   +M ++++    + +  + + L   G  
Sbjct: 113 NSNLVHTTETCNYMLEALRVDGKIEE-MAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGL 171

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           +QA   L    + GF  N  +Y+ LI    K     E +++Y  M      P+L  Y+SL
Sbjct: 172 RQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSL 231

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +  L +   +E      K M++  L P V  +   + +    G   +A  + + M  EG 
Sbjct: 232 MVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 291

Query: 370 KPST 373
            P  
Sbjct: 292 GPDV 295


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFK---------------LVWGFYKEILE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G+++    + D I      P V+   +L+   I++  +++G  L      K
Sbjct: 141 ILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRL------K 194

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           + +H +                             G   + + Y+  I   C+  K++EA
Sbjct: 195 SAMHAS-----------------------------GVQPDVYTYSVLINGLCKESKMDEA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM + GL P   TF  LI+G  K  +++ ++   +QM+S+ L P    +N +I  
Sbjct: 226 NELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA  ++     KG  P++ITY+ LI G  K+G+++   +    M  ++I   
Sbjct: 286 LCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    +KG+      L +
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 406 EMQRDGHVPS 415



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 38/303 (12%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD  R   + G   S++SFNTL++   +    D  +R+   M  +   P+  T
Sbjct: 152 IRLSQSVFDAIR---KWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK                                   E +++E   L   ML
Sbjct: 209 YSVLINGLCK-----------------------------------ESKMDEANELFXEML 233

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +  S +   Y T I   C+ G ++
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++M+   +     A+  +I
Sbjct: 294 QARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALI 353

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++    KL  EM+     
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHV 413

Query: 301 PTL 303
           P++
Sbjct: 414 PSV 416



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + +++ AK      V  +  +SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + ++++      S 
Sbjct: 78  ESGFLRDAIECYRLTREHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYKEILECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G  + +  +       G  P+ ++++ L+ GY ++G++ +  +L   
Sbjct: 137 YFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K++EA++ F  M    LVP    + +L+  H + G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 168/359 (46%), Gaps = 8/359 (2%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G ++ + ++  +++ + K+ +      + + +  N   P  AT   L++ LCK G+L+  
Sbjct: 254 GCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 313

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L +I    C+P V+  TSLI  + +E+R  E   L K M  + +  DT+ Y+ ++  
Sbjct: 314 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRG 373

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
            ++   +  A  VY+ M   G   +    +T I    + G+I  A  + + ME  GL P 
Sbjct: 374 LLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 433

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           +  ++ LI G  KA++++ +L    QM      P    +N +I  LC+ G+ + A     
Sbjct: 434 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 493

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L+ G  P+  TY+ LI G  K G       +  +M     S +   Y+SL+  LC+ G
Sbjct: 494 EMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSG 548

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA-KALHLCEEMVSEGLKPSTSY 375
           KLE     F  M+  S V        L+  HL K N+  +A+ L   +  EG+    +Y
Sbjct: 549 KLEGGCMLFHEME-RSGVANSQTRTRLI-FHLCKANRVDEAVSLFNAIRKEGMPHPYAY 605



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 165/353 (46%), Gaps = 6/353 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT---LISALCKGGQLQTYVDM 80
           IS + ++ +       DL W ++Q  L + R+  + ++ T   L+    +  + +   ++
Sbjct: 83  ISTDAVVKIFQCLKDADLAWELFQ-CLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNL 141

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AYSLIVYAKV 139
           L         P V     LI         EE   +++ M     +  ++  ++L+++   
Sbjct: 142 LKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLC 201

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   + +A+  +E  ++R    ++  ++  I    + G + +A+ L QE    G      
Sbjct: 202 KSGKVLAAMDHFEA-VRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIH 260

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T+  ++   AK K+I+E+++  E++ +    P+ + +N ++  LC+ G  ++A  +L   
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           +D G +P+ +TY+ LI G  KE    E  KL+ EM  + ++     YT+LI  L Q GK+
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKI 380

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +A   +K M SH  VP V    +++    + G    A+ + + M + GL P+
Sbjct: 381 PQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPN 433



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 165/376 (43%), Gaps = 8/376 (2%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   E A D+ R +   G +  ++++ +LI  + K  R+   +++++ M       +   
Sbjct: 307 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVC 366

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  L + G++     +   +    C P V+  +++I  + +  RI   + + K M 
Sbjct: 367 YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 426

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + YS +++   K R ++ AL +  +M K   + ++  Y   I   C+ G +E
Sbjct: 427 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 486

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A     EM  AG KP   T+N+LI G  KA   + +    + M S + +     ++ ++
Sbjct: 487 AARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLV 541

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G   +   ML   +++    N  T + LI    K   + E + L+  +  + + 
Sbjct: 542 DGLCKSGKL-EGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM- 599

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P   AY S+IS+L + GK+ E    ++ M +    P    Y +L+   +      +A + 
Sbjct: 600 PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYY 658

Query: 361 CEEMVSEGLKPSTSYL 376
             EM   G  P  S L
Sbjct: 659 YLEMTGRGYVPPVSIL 674



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 153/351 (43%), Gaps = 35/351 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +R   +S  +F+ LI+ + K+        + Q    N    +  T   +++ L K  ++Q
Sbjct: 217 RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQ 276

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V ++++I    C+P +    +L+  + +  R+EE + LL++++      D + Y+ ++
Sbjct: 277 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 336

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K +    A  +++EM  RG + ++  YT  I    + GKI +A+ + + M + G  
Sbjct: 337 DGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCV 396

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T + +I+G +KA RI  ++   + M +R                            
Sbjct: 397 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR---------------------------- 428

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                  G +PNE+ YS LI G  K  ++   L++  +M+    +P    Y  LI  LC+
Sbjct: 429 -------GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            G +E A  +F  M      P V  Y  L+    + GN   A  + ++M S
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS 532



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 131/255 (51%), Gaps = 10/255 (3%)

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-N 191
           L V+A+ K R+ E+  ++  E L   F  +   +   I  YC   + EEA  +++EME +
Sbjct: 126 LDVFARTK-RHREAGNLLKNE-LATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEED 183

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP-SCSAFNEMIRRLCECGNAK 250
            G+ P  +T NL++ G  K+ ++  ++ + E +  R+ +P S + F+ +I  L + G   
Sbjct: 184 FGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAV--RRSMPVSAATFSILINGLVKAGMMI 241

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           QA+ +       G + +  TY+ ++   AK  +IQE + L  ++     +PT+  Y +L+
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGL 369
           + LC+ G+LEEA    + +  +   P V  Y SL+ G+  EK    +A  L +EM S GL
Sbjct: 302 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK-RSFEAYKLFKEMASRGL 360

Query: 370 KPSTSYLCSASTCRG 384
              T  +C  +  RG
Sbjct: 361 ALDT--VCYTALIRG 373


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 175/386 (45%), Gaps = 13/386 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++ + + ++     ++++N LI+ + K  + +     +  M +    P+ AT  T+I+
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMIN 444

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G L   + +L+ +      P  I    L+ R+     IE+ M LL  ML      
Sbjct: 445 AYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHP 504

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               +  ++ A  K R  +  L ++++++  G   +   Y T I  +C  G I  A  + 
Sbjct: 505 TPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVF 564

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   G+     T+N LI G   +  ++++ +   QM++  + P+   +N ++  L   
Sbjct: 565 KDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAA 624

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+A G++    ++G  PN  TY  L+ G+ K G ++E +KLY EM  K   P    Y
Sbjct: 625 RLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTY 684

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV------------GIHLEKGNK 354
             LIS   +  K+ +A +  + M+   + P    Y+ L+               L++  +
Sbjct: 685 NVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQ 744

Query: 355 AKALHLCEEMVSEGLKPSTSYLCSAS 380
           A+A  L EEM  +G  P  + L   S
Sbjct: 745 AEAKRLFEEMNEKGFIPCENTLACIS 770



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 167/357 (46%), Gaps = 7/357 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG    ++ +  L+  + K+   +    ++Q +LE    PN  T   LI   CK G +  
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L  +  K   P VIV +S++    ++  + E M ++++M+++N++ +   Y  ++ 
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K      AL +++EM  RG   N+FV  +F+      G++EEA+ L ++M + GL P
Sbjct: 306 GYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN--- 253
               +  +++G  KA +  ++ +  ++M  +       A+N +I  L + G  +  +   
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           GM  L    G +P+  T++ +I  Y KEG +   LKL  EM+   + P       L+  L
Sbjct: 426 GMRQL----GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C  G++E+       M      P    +++++    +       LH+ +++V  G+K
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVK 538



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 174/406 (42%), Gaps = 36/406 (8%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A DV R + QR    ++  + TLI    K+D+  +   +++ M       N   I 
Sbjct: 277 LLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           + ++ L + G+++   ++   +  +   P  +  TS++    +  +  +   + + M  K
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           +   D +AY++++    K+   ES    +  M + G + +S  + T I AYC+ G +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS---------- 232
             L+ EM++ GLKP   T N+L++    A  IE+++     M+     P+          
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 233 -------------------------CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                                     S +N +I   C  G  ++A  +    + KG   +
Sbjct: 516 SSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            ITY+ LI GY     +++   ++ +M  + +SP +  Y  L+  L     ++EA     
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVN 635

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            MK   LVP    Y+ LV  H + GN  + + L  EM+++G  P T
Sbjct: 636 QMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKT 681



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 35/381 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+  FN LI    ++        + + M      P+  T  TL++  CK G L T   ++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             I      P VI  T+LI    + + +E+ + +   M  K+++ D + Y+ I+    K 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +E A  V+ EM + G   N F Y T I +  + G + EA  L   M   G+      +
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             L++G  KA     +    + ++   L+P+C  ++ +I   C+ G+  +   +L    +
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI----------- 310
           K   PN I YS ++ GY K+G + E + +  +M  ++I P +  Y +LI           
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 311 ------------------------SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
                                   ++L + G++EEAD+ FK M S  L+P    Y S++ 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 347 IHLEKGNKAKALHLCEEMVSE 367
              + G ++ A ++ +EM  +
Sbjct: 376 GFFKAGKESDAFNIAQEMTEK 396



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 154/359 (42%), Gaps = 1/359 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E++    ++I +++++   TK    +    + + M++    PN     TLI    K  Q
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               +D+   +  +       V  S +  + +  R+EE   L K M+ + ++ D + Y+ 
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K      A  + +EM ++    +   Y   I    + GK  E+      M   G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   TFN +I    K   +  +L    +M S  L P+    N +++RLC  G  ++  
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   L  GF P   T+  ++   +K      +L ++ ++    +   L  Y +LIS+ 
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C+ G +  A   FK M    ++  +  Y +L+  +    +  KA  +  +M++EG+ P+
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPN 610



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 35/297 (11%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I   + LL+ M  +    D + Y+ ++    K+ +L +A  +  E+       N   YTT
Sbjct: 33  ISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTT 92

Query: 169 FIGAY-----------------------------------CEYGKIEEANCLMQEMENAG 193
            I AY                                   C+ GK+EEA  + +EME  G
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++  LI+   K   + E+     +M+ R +      +  ++  L + G A  A 
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M  + L++   PN +TYS LI G+ K G++ +   L  EME K I P +  Y+S++   
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            + G L EA    + M   +++P V +Y +L+  + +   +  AL L +EM S GL+
Sbjct: 273 TKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 110/229 (48%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           +  A+ + E M   G + +   Y T +  +C+ G +  A  LM E+    L+P   T+  
Sbjct: 33  ISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTT 92

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI+   K++ +E++L   ++M  + L+P    +  ++  LC+ G  ++A  +     + G
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN  +Y+ LI    KEG + E   L   M  + I   +  YT+L+  L + G    A+
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             F+++   SLVP    Y +L+  H + G+  K   L +EM  + + P+
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPN 261


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 2/367 (0%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +++ G   SL ++N L++ +  S   +   ++++ M      P+  T   +I   C
Sbjct: 205 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 264

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G+LQ  ++    +  K   P  I   +LI     E   +  + L   M  + +     
Sbjct: 265 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 324

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +YSL++    K R    A  V+E M ++G  AN  +YT  I +Y + G +EEA  L + M
Sbjct: 325 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 384

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           +N G +P   T+++L+ G  K+ R+++ +   +   ++ +  +   +  +I  L + G  
Sbjct: 385 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 444

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
           + A  +     +KG + +   Y+ +I   AK G+I + L L+  ME +    T+  +T L
Sbjct: 445 EDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTIL 504

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL-VGIHLEKGNKAKALHLCEEMVSEG 368
           I  L +  K EEA K++  M    + P V  + +L +G+ L  G  A+A  + +++   G
Sbjct: 505 IDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCL-CGKVARACKILDDLAPMG 563

Query: 369 LKPSTSY 375
           + P T++
Sbjct: 564 IIPETAF 570



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 8/331 (2%)

Query: 5   EVAFDVCRYL----EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           E  FD C  L    E+RG  +   S++ +I  + K  +    + +++ M +     N A 
Sbjct: 301 ERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAI 360

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI +  K G ++  + + +R+  +   P  +  + L+  + +  R+++GM L     
Sbjct: 361 YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 420

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +  + + Y+ ++    K   +E A  ++EEM ++G + +S+ Y   I A  ++GKI+
Sbjct: 421 NKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKID 480

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A  L   ME  G      TF +LI+G  K  + EE++ + ++M+ + + P+ ++F  + 
Sbjct: 481 QALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALA 540

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC CG   +A  +L      G  P E  +  +I    K   I+E  KL   +  +   
Sbjct: 541 IGLCLCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRIKEACKLADGIVDRGRE 599

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
                 T LI++L + G    +D   K+M S
Sbjct: 600 IPGRIRTVLINALRKAGN---SDLVIKLMHS 627



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 103/225 (45%)

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
           +V+ E+  RG         + I ++   G +EE   + + M+  G+ P   T+N L+ G 
Sbjct: 169 LVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGL 228

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
             +  IE +    E M   K++P    +N MI+  C+ G  ++A         K   P++
Sbjct: 229 VNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDK 288

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           ITY  LI     E +    L LY EME + +     +Y+ +I  LC+  K  EA   F+ 
Sbjct: 289 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 348

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           M        V IY +L+  + + G+  +A+ L E M +EG +P  
Sbjct: 349 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDA 393



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 153/360 (42%), Gaps = 45/360 (12%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRN-----DLVWRIYQHMLENIRYPNEATIRTLISAL 68
           L+ RG  ++  + N+LI    KS  N     +L+W +++ M EN   P+  T   L++ L
Sbjct: 174 LKDRGLLMTESAANSLI----KSFGNLGLVEELLW-VWRRMKENGIDPSLYTYNFLVNGL 228

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
                +++   + + + G +  P  +    +I    +  ++++ M   + M  KN+  D 
Sbjct: 229 VNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDK 288

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           I Y  ++ A    R+ ++ L +Y EM +RG       Y+  IG  C+  K  EA  + + 
Sbjct: 289 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 348

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G +     +  LI+  +K   +EE++   E+M                        
Sbjct: 349 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK----------------------- 385

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
                       ++GF P+ +TYS L+ G  K G + + ++L+     K ++     Y S
Sbjct: 386 ------------NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 433

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI  L + G++E+A+  F+ M           Y +++    + G   +AL L   M  EG
Sbjct: 434 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 493



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           D+G    E   + LI  +   G ++E+L ++  M+   I P+L  Y  L++ L     +E
Sbjct: 176 DRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIE 235

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSYLCSA 379
            A+K F++M    +VP    Y  ++  + + G   KA+    +M  + +KP   +Y+   
Sbjct: 236 SAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLI 295

Query: 380 STC 382
             C
Sbjct: 296 QAC 298


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 172/369 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A ++   +   G  +S  ++N LI    K +  +    + + ML     P   T  T
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNT 317

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           ++ +LC+ G++      LD +  +   P ++   +LI    +     E ++L   +  KN
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++   + Y+ ++    +  NL+ A  + ++M+K G   +   +T  +  +C+ G +  A 
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM + GLKP    +   I G  K     ++    E+M +    P    +N +I  L
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGL 497

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ GN   AN ++     +G  P+ +TY+ +I  +   G +++  +++ +M  K I P++
Sbjct: 498 CKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV 557

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT LI S    G+L+ A KYF  M+   + P V  Y +L+    ++     A +L  E
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617

Query: 364 MVSEGLKPS 372
           M S+G+ P+
Sbjct: 618 MESKGVSPN 626



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 170/371 (45%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +FE A D+ R +  RG   +++++NT+++ + +  R     R    M+     P+  +  
Sbjct: 292 MFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYN 351

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI    + G     + +   +  K   P V+   +LI    +   ++    +   M++ 
Sbjct: 352 TLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKH 411

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + ++++V    +M NL  A  +++EML RG   +   YTT I    + G   +A
Sbjct: 412 GLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKA 471

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             + +EM+  G  P   T+N+LI G  K    +++    ++M    ++P    +  +I  
Sbjct: 472 FGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
               G  ++A  + +  L KG  P+ +TY+ LI  YA  G +    K + EM+ K +SP 
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
           +  Y +LI  LC+   ++ A   F  M+S  + P    Y  L+  +        AL L +
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYK 651

Query: 363 EMVSEGLKPST 373
           +M+   +KP +
Sbjct: 652 DMLDREIKPDS 662



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 158/381 (41%), Gaps = 38/381 (9%)

Query: 42  VWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSP-----MVIVN 96
           V  +Y  M++    P   T  T++ + CK G++   V++LD +    C P      V+VN
Sbjct: 191 VEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN 250

Query: 97  ------------------------------TSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                                           LI    ++E  EE   L + ML +  + 
Sbjct: 251 GLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP 310

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ I+Y+  ++  +  A    + M+      +   Y T I  Y   G   EA  L 
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLF 370

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            E+ +  L P   T+N LI+G  +   ++ +    + M+   L P    F  ++R  C+ 
Sbjct: 371 SELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQM 430

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN   A  +    L +G  P+ I Y+  I G  K G   +   +  EM+ +   P L  Y
Sbjct: 431 GNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITY 490

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             LI+ LC+ G  ++A++  + M+   +VP    Y S++  HL  G   KA  +  +M+ 
Sbjct: 491 NVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLK 550

Query: 367 EGLKPST---SYLCSASTCRG 384
           +G+ PS    + L  +   RG
Sbjct: 551 KGIHPSVVTYTVLIHSYAVRG 571



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 151/359 (42%), Gaps = 4/359 (1%)

Query: 9   DVCRYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  RYL+          L+S+NTLI+  ++         ++  +      P+  T  TLI
Sbjct: 330 DARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLI 389

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              C+ G L     M D +      P V+  T L+    Q   +     L   ML + + 
Sbjct: 390 DGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLK 449

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D IAY+  +  ++K+ N   A  + EEM   GF  +   Y   I   C+ G  ++AN L
Sbjct: 450 PDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANEL 509

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +Q+M   G+ P   T+  +I     +  + ++      M+ + + PS   +  +I     
Sbjct: 510 VQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAV 569

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G    A        DKG SPN ITY+ LI G  KE  +     L+ EME K +SP    
Sbjct: 570 RGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYT 629

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           YT LI+        ++A K +K M    + P    + +L+  HL K  K  A+   E +
Sbjct: 630 YTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMK-HLSKDYKLLAVLRLENL 687



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 8/208 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTK----SDRNDLVWRIYQHMLENIRYPNEATIR 62
           AF +   ++  GF   LI++N LI+ + K     D N+LV ++    LE I  P+  T  
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKM---RLEGI-VPDHVTYT 526

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           ++I A    G L+   ++   +  K   P V+  T LI       R++        M  K
Sbjct: 527 SIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDK 586

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + I Y+ ++Y   K   ++ A  ++ EM  +G S N + YT  I         ++A
Sbjct: 587 GVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDA 646

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAK 210
             L ++M +  +KP   T + L++  +K
Sbjct: 647 LKLYKDMLDREIKPDSCTHSALMKHLSK 674



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 74/173 (42%)

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
            +LLI+  AK   +E+ L    +M++  LLP     N +++ L +     +   + ++ +
Sbjct: 140 LDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMI 199

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
                P  +T++ ++    KEGE+   +++   M      P   +Y  L++ L   G+ +
Sbjct: 200 KCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFD 259

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            A +  + M    L      Y  L+    +K    +A  L  EM+  G  P+ 
Sbjct: 260 RAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTV 312



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 9/143 (6%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   S++++  LIH      R D   + +  M +    PN  T   LI  LCK   + 
Sbjct: 550 KKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMD 609

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI- 134
              ++   +  K  SP     T LI      +  ++ + L K ML + +  D+  +S + 
Sbjct: 610 VAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALM 669

Query: 135 --------VYAKVKMRNLESALV 149
                   + A +++ NL  A+V
Sbjct: 670 KHLSKDYKLLAVLRLENLPLAIV 692


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 139/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM +  L P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   K    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 122/241 (50%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +++++++ VK   +  A  V++ + K     +   + T +  Y + G ++E   L   M+
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            +G++P   T+++LI G  K  +++++    ++M+   L+P+   F  +I   C+ G   
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVD 258

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +    L +  SP+ ITY+ LI G  K+G++++   L  EM  K + P    YT+LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+ G LE A KY K M   ++      Y +L+    ++G    A  +  EM+S GLK
Sbjct: 319 DGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 371 P 371
           P
Sbjct: 379 P 379



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 111/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD    PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIR 343



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD       R    S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDAITKWSLRP---SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +          P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 170/373 (45%), Gaps = 2/373 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRND--LVWRIYQHMLENIRYPNEATI 61
            E A ++   + + GF    ++++ +I  +T+++++D  ++ +IY  +  +    +   +
Sbjct: 200 LEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLL 259

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I    K G +   +  L  + G   SP      ++I  +    R EE   + + +  
Sbjct: 260 NDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKE 319

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++  T AY+ ++   VK  +L+ A  +  EM + GFS +   Y+  I AY   G+ E 
Sbjct: 320 GGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWES 379

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +++EME +G++P    F+ ++       + ++S     +M +  + P    +N MI 
Sbjct: 380 ARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMID 439

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
              +C     A         +G  P+ +T++ LI  + K G   +  +L+  M+    SP
Sbjct: 440 TFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSP 499

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               Y  +I+S  +  + E+       M+S  L+  V  Y +LV I+ + G    A+   
Sbjct: 500 CTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECL 559

Query: 362 EEMVSEGLKPSTS 374
           E M S GLKPS++
Sbjct: 560 EVMKSVGLKPSST 572



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 4/318 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+E T   LI A    G+ ++   +L  +      P   V + ++       + ++   +
Sbjct: 359 PDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQV 418

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+ M    +  D   Y++++    K   L+ AL  ++ M   G   ++  + T I  +C+
Sbjct: 419 LREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCK 478

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G   +A  L + M+ +G  P   T+N++I    + +R E+  +   +M S+ LL +   
Sbjct: 479 SGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVT 538

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  ++    + G  K A   L +    G  P+   Y+ LI  YA+ G  ++ +  +  M 
Sbjct: 539 YTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMR 598

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGN 353
              + P++    SLI++  +  +  EA    + MK + L P V  Y +L+   I +EK +
Sbjct: 599 ADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFD 658

Query: 354 KAKALHLCEEMVSEGLKP 371
           K  A++  EEM   G  P
Sbjct: 659 KVPAVY--EEMTLSGCTP 674



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/334 (20%), Positives = 145/334 (43%), Gaps = 13/334 (3%)

Query: 48  HMLENIRYPNEATIRTLISALCKG----GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++E+ R        +L+ +LC      G   + V  L+R +   C    ++ + LI  +
Sbjct: 107 QLVESYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWLERHN--LCFSYELLYSILIHAL 164

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            + E++ E  +L +R          + Y+ ++ A  +  +LE AL +   M + GF ++ 
Sbjct: 165 GRSEKLYEAFLLSQRQTLT-----PLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDF 219

Query: 164 FVYTTFIGAYCEYGKIEEA--NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
             Y+  I +     K + +    +  E+E+  ++   +  N +I G AK+  +  ++S+ 
Sbjct: 220 VNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFL 279

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
             +    L P  +    +I  L   G  ++A  +     + G  P    Y+ L+ GY K 
Sbjct: 280 AMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKT 339

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G +++   +  EME    SP    Y+ LI +    G+ E A    K M++  + P   ++
Sbjct: 340 GSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVF 399

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
             ++  + ++G   K+  +  EM + G+ P   +
Sbjct: 400 SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHF 433



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 2/241 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIR 62
           ++ +F V R +   G S     +N +I    K +  D     +  M +E ++ P+  T  
Sbjct: 412 WQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQ-PDAVTWN 470

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI   CK G      ++ + +    CSP       +I    ++ER E+   LL +M  +
Sbjct: 471 TLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQ 530

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ + + Y+ +V    +    + A+   E M   G   +S +Y   I AY + G  E+A
Sbjct: 531 GLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQA 590

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
               + M   GLKP     N LI    + +R  E+ S  + M    L P    +  +++ 
Sbjct: 591 INAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKA 650

Query: 243 L 243
           L
Sbjct: 651 L 651


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 16/377 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ AF + + + ++GF     +++ +I  +  + + +  + ++Q M      P+  T   
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G ++    + + +    CSP V+  T+LI   ++ +++ +   +  RM+   
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS----------------FVYT 167
              + + Y  +V    K  N+  A  VY +++    SA+S                  Y 
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             +   C+  K++ A+ L+  M ++G +P    ++ LI+G  KA +I+ +     QM   
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             LPS   +  +I R+ + G    A  +L+  L    +PN +TY+ +I G  + GE ++ 
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           LKL   ME K  SP +  YT+LI  L + GK++ +   F  M      P    Y  L+  
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628

Query: 348 HLEKGNKAKALHLCEEM 364
               G   KA  L  EM
Sbjct: 629 LCAAGLLDKARLLLGEM 645



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 170/365 (46%), Gaps = 9/365 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+  G+  S +++N L+ V++ + + DL +R+ + M E+    +  T+     ALCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               +DM++R   K  +   ++ T +I  +++    +E M  L RM   + I + + Y  
Sbjct: 91  WADALDMIEREDFKLDT---VLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   +K + L     +   M+  G + N  ++ + + +YC       A  L+  M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 194 LKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM-----IRRLCECG 247
             P    +N+ I   C + K     L    + +  ++L +    N++      R LC  G
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +A  ++   + KGF P+  TYS +I       ++++   L+ EM+   ++P +  YT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            LI S C+ G +E+A   F+ M+S    P V  Y +L+  +L+     +A  +   MV  
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 368 GLKPS 372
           G +P+
Sbjct: 388 GCRPN 392



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 160/374 (42%), Gaps = 22/374 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ TL+    K  +     RI   M+     PN +   +L+ + C          +L
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL------LKRMLRKNMIHDTIAYSLIV 135
           +R+    C P  +V    I  I  +E++    +L         ML  N + + +  +   
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +   + A  + +EM+++GF  ++  Y+  I   C   K+E+A  L QEM+  G+ 
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ +LI+   KA  IE++    E+M S    P+   +  +I    +     QAN +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM----------------EYKSI 299
               +D G  PN++TY  L+ G  K G I +  ++Y ++                +  ++
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P +  Y +L+  LC+  K++ A +    M S    P   +Y++L+    + G    A  
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500

Query: 360 LCEEMVSEGLKPST 373
           +  +M   G  PS 
Sbjct: 501 VFLQMTKCGYLPSV 514



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 143/349 (40%), Gaps = 35/349 (10%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   L+  LCK  ++    ++LD +    C P  IV  +LI    +  +I+    +
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             +M +   +     Y+ ++    K   L+ A+ V  +MLK   + N   YT  I   C 
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ E+A  L+  ME  G  P   T+  LI+G  KA +I+ SL    QM  +   P+   
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 236 FNEMIRRLCECGNAKQAN---------------------------------GMLTLALDK 262
           +  +I  LC  G   +A                                  G+L      
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME--YKSISPTLPAYTSLISSLCQCGKLE 320
           G  P    Y  LI  ++K G ++  ++L+ EM     S+      Y SLI +LC   ++E
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 741

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           EA + +  M     VP + ++  L+   +E     +AL LC  +  EG+
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 10/288 (3%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+ ++ +LI  + K  R DL  ++   ML++   PN  T   +I  LC+ G+ +  
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +L  +  K CSP V+  T+LI  + +  +I+  + L  +M RK    + + Y +++  
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 L+ A ++  EM +  +      Y   I  + +      +  +++EME+ G  P 
Sbjct: 629 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPI 686

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-----SAFNEMIRRLCECGNAKQA 252
              + +LI+  +KA R+E ++   ++MM    +PS        +  +I+ LC     ++A
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEA 743

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             + +    +GF P    +  LI G  +  +  E L+L Y + ++ ++
Sbjct: 744 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 791



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 26/230 (11%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +E++G S +++++  LI  + K+ + DL   ++  M      PN  T R L
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625

Query: 65  ISALCKGGQL-----------QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           I+ LC  G L           QTY      + G RC+      + +    I EE    G 
Sbjct: 626 INHLCAAGLLDKARLLLGEMKQTYWP--KYLQGYRCAIQGFSKSFIASLGILEEMESYGT 683

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK--RGFSANSFVYTTFIG 171
           V +  +           Y +++    K   LE A+ +++EM++       ++ +Y + I 
Sbjct: 684 VPIAPV-----------YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           A C   ++EEA  L  EM   G  P    F  LI+G  + K+ +E+L  C
Sbjct: 733 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLC 782



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 24/269 (8%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y+ +V        ++    V +EM + GF  + F    F  A C+ G+  +A   +  
Sbjct: 41  VTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA---LDM 97

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           +E    K        +I G  +A   +E++S+  +M     +P+   +  ++    +   
Sbjct: 98  IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
                 ++ + + +G +PN   ++ L+  Y  E +     KL   M      P    Y  
Sbjct: 158 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217

Query: 309 LISSLCQCGKLEEADK-------YFKIMKSHSLVPGVDIYE---SLVGIHLEKGNKAKAL 358
            I S+C   KL   D        Y +++ ++ ++  V++      L G+    G   KA 
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV----GKFDKAF 273

Query: 359 HLCEEMVSEGLKPSTS-------YLCSAS 380
            L +EM+ +G  P TS       +LC A+
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHAT 302



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 3/144 (2%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           PS   +N +++ L   G       +     + GF  +  T         KEG   + L +
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
               ++K +   L   T +IS L +    +EA  +   M+ +S +P V  Y +L+   L+
Sbjct: 98  IEREDFK-LDTVL--CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 351 KGNKAKALHLCEEMVSEGLKPSTS 374
           K        +   M++EG  P+ S
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPS 178


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 166/387 (42%), Gaps = 33/387 (8%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +L++ N  I  + K  R     ++++ M +    PNE T   LI +LCK G ++  
Sbjct: 46  GIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDA 105

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + M DR+  K     V    SLI    +     +   LL  M+ K +     +YS ++  
Sbjct: 106 LCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAG 165

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +  +L SA+ ++ EM +   S N + +T  I  +C+ G ++EA  L  +M  + L P 
Sbjct: 166 LCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPN 225

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA----- 252
           + TFN++IEG  +   I ++    +QM+ R L P    +  +I  +C    A +A     
Sbjct: 226 EVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVA 285

Query: 253 ---------NGMLTLALDKGFS------------------PNEITYSHLIGGYAKEGEIQ 285
                    N     AL  GF                   PN  TY+  +   A EGE++
Sbjct: 286 DLENNCAVLNSFSLTALMHGFCKEGSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELE 345

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +   L+  M    ++ T+  + +LI   C  G+++ A    +        P    Y +++
Sbjct: 346 KAKVLHAAMLEGCLANTV-TFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTII 404

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               + G+  KA  L  EM+ +GLKP 
Sbjct: 405 NELCKVGDTNKAFELWNEMLYKGLKPD 431



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 127/261 (48%)

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           M +L+     + IH    ++  +  K    ++  +  +  +  K G  AN      +I  
Sbjct: 1   MEILEHWFVFSWIHQKHNWAWKLRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDR 60

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
             + G+  EA  L + M + GL P + T+ +LI    K   +E++L   ++M  + +  +
Sbjct: 61  LGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMT 120

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +N +I   C+  N  QA G+L   + KG +P+  +YS LI G  ++G++   ++L+ 
Sbjct: 121 VYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHR 180

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM   ++S  +  +T+LIS  C+ G ++EA + F  M   SLVP    +  ++  +   G
Sbjct: 181 EMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVG 240

Query: 353 NKAKALHLCEEMVSEGLKPST 373
           N  KA  L ++M+  GL P  
Sbjct: 241 NIRKAFQLYDQMLDRGLTPDN 261



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 164/353 (46%), Gaps = 4/353 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G  +++  +N+LI+   K +       +   M+     P+ A+   LI+ LC+ G 
Sbjct: 112 MREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGD 171

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L + +++   +     S  V   T+LI    ++  ++E   L  +M+  +++ + + +++
Sbjct: 172 LASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNV 231

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    ++ N+  A  +Y++ML RG + +++ Y + I   C      +A   + ++EN  
Sbjct: 232 MIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNC 291

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
                 +   L+ G  K    E     C++M++   LP+   +N  +  L   G  ++A 
Sbjct: 292 AVLNSFSLTALMHGFCKEGSAE---ILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAK 348

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L  A+ +G   N +T++ LI G+   G+IQ  + L  +       P   +Y+++I+ L
Sbjct: 349 -VLHAAMLEGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINEL 407

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           C+ G   +A + +  M    L P +  Y  L+      G   K L +  +MV+
Sbjct: 408 CKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDMVT 460



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 137/307 (44%), Gaps = 6/307 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + +   S ++ +F  LI    K    D   R++  M+E+   PNE T   +I 
Sbjct: 175 AMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIE 234

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G ++    + D++  +  +P      SLI  +       +    +  +     + 
Sbjct: 235 GYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVL 294

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           ++ + + +++   K     SA ++ +EML   F  NS+ Y  F+      G++E+A  L 
Sbjct: 295 NSFSLTALMHGFCKE---GSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLH 351

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G      TFN LI+G   A +I+ ++   ++       P C +++ +I  LC+ 
Sbjct: 352 AAMLE-GCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKV 410

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +    L KG  P+ + Y+ LI      GE  + L +Y +M   ++ P  P  
Sbjct: 411 GDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDM--VTVLPEYPEV 468

Query: 307 TSLISSL 313
            ++++ L
Sbjct: 469 YNIVNKL 475


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 166/390 (42%), Gaps = 36/390 (9%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +FN L+ ++ +S+  D  W I+  +   +   +  +   +I   C+ G       +L  +
Sbjct: 126 TFNNLLCLLIRSNYFDKAWWIFNELKSKVVL-DAYSFGIMIKGCCEAGYFVKGFRLLAML 184

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                SP V++ T+LI    ++  +     L  +M R  ++ +   YS+++    K    
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQ 244

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                +YE M + G   N++ Y   I  YC  G +++A  +  EM   G+     T+N+L
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNIL 304

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  + K+  E++    ++    L P+   +N +I   C+      A  +       G 
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGL 364

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS------------ 312
           SP  +TY+ LI GY+K   +   L L  EME + I+P+   YT LI +            
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACE 424

Query: 313 -----------------------LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
                                  LC  G ++EA K FK +    L P   IY +++  + 
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYC 484

Query: 350 EKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           ++G+  +AL L  EMV  G+ P+ +  CS 
Sbjct: 485 KEGSSYRALRLLNEMVQSGMVPNVASFCST 514



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 145/311 (46%), Gaps = 3/311 (0%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
           +++Y++M  +   PN      LIS  C  G +     +   +  K  +  V+    LI  
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307

Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
           + + ++  E + L+ ++ +  +  + + Y++++     +R ++SA+ ++ ++   G S  
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPT 367

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
              Y T I  Y +   +  A  L++EME   + P   T+ +LI+  A+    E++     
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHS 427

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
            M    L+P    ++ ++  LC  GN K+A+ +     +    PN + Y+ +I GY KEG
Sbjct: 428 LMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
                L+L  EM    + P + ++ S I  LC+  K +EA+     M +  L P V +Y+
Sbjct: 488 SSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547

Query: 343 SLVGIHLEKGN 353
               +H  KG+
Sbjct: 548 M---VHKVKGD 555



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 36/243 (14%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN---------------------- 202
           +Y T + AY      ++A   +  M + G  P   TFN                      
Sbjct: 91  LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL 150

Query: 203 ------------LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
                       ++I+GC +A    +       +    L P+   +  +I   C+ GN  
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +       G  PN  TYS L+ G+ K+G  +E  ++Y  M+   I P   AY  LI
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK-AKALHLCEEMVSEGL 369
           S  C  G +++A K F  M+   +  GV  Y  L+G  L +G K  +A+ L  ++   GL
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG-GLCRGKKFGEAVKLVHKVNKVGL 329

Query: 370 KPS 372
            P+
Sbjct: 330 SPN 332



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 1/240 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A  +   + + G S +++++N LI+      + D   R++  +  +   P   T  T
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNT 373

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+   K   L   +D++  +  +  +P  +  T LI    +    E+   +   M +  
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSG 433

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D   YS++++      N++ A  +++ + +     NS +Y T I  YC+ G    A 
Sbjct: 434 LVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRAL 493

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM  +G+ P   +F   I    + ++ +E+     QM++  L PS S + +M+ ++
Sbjct: 494 RLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY-KMVHKV 552



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 89/196 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  + A  +   L+  G S +L+++NTLI   +K +       + + M E    P++ T
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI A  +    +   +M   +      P V   + L+  +     ++E   L K + 
Sbjct: 406 YTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLG 465

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
             ++  +++ Y+ +++   K  +   AL +  EM++ G   N   + + IG  C   K +
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWK 525

Query: 181 EANCLMQEMENAGLKP 196
           EA  L+ +M N+GLKP
Sbjct: 526 EAELLLGQMINSGLKP 541


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 16/377 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ AF + + + ++GF     +++ +I  +  + + +  + ++Q M      P+  T   
Sbjct: 204 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 263

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G ++    + + +    CSP V+  T+LI   ++ +++ +   +  RM+   
Sbjct: 264 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 323

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS----------------FVYT 167
              + + Y  +V    K  N+  A  VY +++    SA+S                  Y 
Sbjct: 324 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 383

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             +   C+  K++ A+ L+  M ++G +P    ++ LI+G  KA +I+ +     QM   
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 443

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             LPS   +  +I R+ + G    A  +L+  L    +PN +TY+ +I G  + GE ++ 
Sbjct: 444 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 503

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           LKL   ME K  SP +  YT+LI  L + GK++ +   F  M      P    Y  L+  
Sbjct: 504 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 563

Query: 348 HLEKGNKAKALHLCEEM 364
               G   KA  L  EM
Sbjct: 564 LCAAGLLDKARLLLGEM 580



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 160/374 (42%), Gaps = 22/374 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ TL+    K  +     RI   M+     PN +   +L+ + C          +L
Sbjct: 76  NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 135

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL------LKRMLRKNMIHDTIAYSLIV 135
           +R+    C P  +V    I  I  +E++    +L         ML  N + + +  +   
Sbjct: 136 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 195

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +   + A  + +EM+++GF  ++  Y+  I   C   K+E+A  L QEM+  G+ 
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ +LI+   KA  IE++    E+M S    P+   +  +I    +     QAN +
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 315

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM----------------EYKSI 299
               +D G  PN++TY  L+ G  K G I +  ++Y ++                +  ++
Sbjct: 316 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 375

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P +  Y +L+  LC+  K++ A +    M S    P   +Y++L+    + G    A  
Sbjct: 376 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 435

Query: 360 LCEEMVSEGLKPST 373
           +  +M   G  PS 
Sbjct: 436 VFLQMTKCGYLPSV 449



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 143/349 (40%), Gaps = 35/349 (10%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   L+  LCK  ++    ++LD +    C P  IV  +LI    +  +I+    +
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             +M +   +     Y+ ++    K   L+ A+ V  +MLK   + N   YT  I   C 
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ E+A  L+  ME  G  P   T+  LI+G  KA +I+ SL    QM  +   P+   
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556

Query: 236 FNEMIRRLCECGNAKQAN---------------------------------GMLTLALDK 262
           +  +I  LC  G   +A                                  G+L      
Sbjct: 557 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 616

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME--YKSISPTLPAYTSLISSLCQCGKLE 320
           G  P    Y  LI  ++K G ++  ++L+ EM     S+      Y SLI +LC   ++E
Sbjct: 617 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 676

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           EA + +  M     VP + ++  L+   +E     +AL LC  +  EG+
Sbjct: 677 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 144/319 (45%), Gaps = 9/319 (2%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T+     ALCK G+    +DM++R   K  +   ++ T +I  +++    +E M  L RM
Sbjct: 12  TVGCFAHALCKEGRWADALDMIEREDFKLDT---VLCTHMISGLMEASYFDEAMSFLHRM 68

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
              + I + + Y  ++   +K + L     +   M+  G + N  ++ + + +YC     
Sbjct: 69  RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDY 128

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
             A  L+  M   G  P    +N+ I   C + K     L    + +  ++L +    N+
Sbjct: 129 AYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNK 188

Query: 239 M-----IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           +      R LC  G   +A  ++   + KGF P+  TYS +I       ++++   L+ E
Sbjct: 189 VNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 248

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   ++P +  YT LI S C+ G +E+A   F+ M+S    P V  Y +L+  +L+   
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 308

Query: 354 KAKALHLCEEMVSEGLKPS 372
             +A  +   MV  G +P+
Sbjct: 309 VPQANDIFHRMVDAGCRPN 327



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 10/288 (3%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+ ++ +LI  + K  R DL  ++   ML++   PN  T   +I  LC+ G+ +  
Sbjct: 444 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 503

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +L  +  K CSP V+  T+LI  + +  +I+  + L  +M RK    + + Y +++  
Sbjct: 504 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 563

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 L+ A ++  EM +  +      Y   I  + +      +  +++EME+ G  P 
Sbjct: 564 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPI 621

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-----SAFNEMIRRLCECGNAKQA 252
              + +LI+  +KA R+E ++   ++MM    +PS        +  +I+ LC     ++A
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEA 678

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             + +    +GF P    +  LI G  +  +  E L+L Y + ++ ++
Sbjct: 679 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGVN 726



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 26/230 (11%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +E++G S +++++  LI  + K+ + DL   ++  M      PN  T R L
Sbjct: 501 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 560

Query: 65  ISALCKGGQL-----------QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           I+ LC  G L           QTY      + G RC+      + +    I EE    G 
Sbjct: 561 INHLCAAGLLDKARLLLGEMKQTYWP--KYLQGYRCAIQGFSKSFIASLGILEEMESYGT 618

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK--RGFSANSFVYTTFIG 171
           V +  +           Y +++    K   LE A+ +++EM++       ++ +Y + I 
Sbjct: 619 VPIAPV-----------YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 667

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           A C   ++EEA  L  EM   G  P    F  LI+G  + K+ +E+L  C
Sbjct: 668 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLC 717



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 24/244 (9%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M + GF  + F    F  A C+ G+  +A   +  +E    K        +I G  +A  
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASY 57

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
            +E++S+  +M     +P+   +  ++    +         ++ + + +G +PN   ++ 
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK-------YF 326
           L+  Y  E +     KL   M      P    Y   I S+C   KL   D        Y 
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 327 KIMKSHSLVPGVDIYE---SLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS-------YL 376
           +++ ++ ++  V++      L G+    G   KA  L +EM+ +G  P TS       +L
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGV----GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 233

Query: 377 CSAS 380
           C A+
Sbjct: 234 CHAT 237


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 187/378 (49%), Gaps = 10/378 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-------NDLVWRIYQHMLENIRYPNEA 59
             ++ R L   G    ++S+N ++  +  + R        D + ++++ + +  ++    
Sbjct: 205 GLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTP 264

Query: 60  TIR---TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
            IR   T+I  +CK G  +   ++L R+      P V+   +++  I   +R E+   LL
Sbjct: 265 DIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELL 324

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             M +KN   D + ++++V    +   ++  + + E+ML+ G   +   YTT I  +C+ 
Sbjct: 325 TEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKE 384

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           G I+EA  L++ M + G KP   ++ ++++G    +R  ++     +M+ +  LP+   F
Sbjct: 385 GLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTF 444

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           N +I  LC+ G  +QA  +L   L  G +P+ I+YS +I G  K G+ +E L+L   M  
Sbjct: 445 NTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMIN 504

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           K I+P +  Y+S+  +L + G++++  + F  ++  ++     +Y +++    ++     
Sbjct: 505 KGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDL 564

Query: 357 ALHLCEEMVSEGLKPSTS 374
           A+     MVS G  P+ S
Sbjct: 565 AIDFLAYMVSNGCMPNES 582



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 166/362 (45%), Gaps = 35/362 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           EVA ++   +   G   +++ +NT++  +  +DR +    +   M +     ++ T   L
Sbjct: 283 EVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNIL 342

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +   C+ G +   +++L+++    C P VI  T++I    +E  I+E ++LLK M     
Sbjct: 343 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGC 402

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +TI+Y++++           A  +   M+++G   N   + T I   C+ G +E+A  
Sbjct: 403 KPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIE 462

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+++M   G  P   +++ +I+G  KA + EE+L                          
Sbjct: 463 LLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALE------------------------- 497

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                     +L + ++KG +PN ITYS +    A+EG I +V++++  ++  +I     
Sbjct: 498 ----------LLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAV 547

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y ++ISSLC+  + + A  +   M S+  +P    Y +L+     +G   +A  L  E+
Sbjct: 548 LYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607

Query: 365 VS 366
            S
Sbjct: 608 CS 609



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 136/291 (46%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A ++   + Q+   L  ++FN L+    ++   D V  + + MLE+   P+  T  T
Sbjct: 317 WEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT 376

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+  CK G +   V +L  +    C P  I  T ++  +   ER  +   L+ RM+++ 
Sbjct: 377 VINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG 436

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + + + ++ I+    K   +E A+ + ++ML  G + +   Y+T I    + GK EEA 
Sbjct: 437 CLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEAL 496

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+  M N G+ P   T++ +    A+  RI++ +   + +    +      +N +I  L
Sbjct: 497 ELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSL 556

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
           C+      A   L   +  G  PNE TY+ LI G A EG + E   L  E+
Sbjct: 557 CKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/409 (20%), Positives = 171/409 (41%), Gaps = 48/409 (11%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D  R L+  G +  ++ +N ++    +  + +   R+   +      PN  T   ++  L
Sbjct: 70  DAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVPVP---PNAYTYFPVVRGL 126

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPM-----VIV---------------------------- 95
           C  G++   + +LD +  + C P+     VI+                            
Sbjct: 127 CGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDT 186

Query: 96  -NTSLILRIIQEER-IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
            N +L++  I ++  ++EG+ +L+++       D ++Y+ ++      +       + +E
Sbjct: 187 GNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDE 246

Query: 154 MLK----------RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           M+K           G + +  +Y T I   C+ G  E AN ++  M + GLKP    +N 
Sbjct: 247 MVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNT 306

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +++G   A R E++     +M  +        FN ++   C+ G   +   +L   L+ G
Sbjct: 307 VLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 366

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ ITY+ +I G+ KEG I E + L   M      P   +YT ++  LC   +  +A+
Sbjct: 367 CMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAE 426

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +    M     +P    + +++    +KG   +A+ L ++M+  G  P 
Sbjct: 427 ELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPD 475



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 16/279 (5%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           RI + + +L  M  ++ +     Y +I+ +  +     SAL V E +  +G + ++    
Sbjct: 131 RIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCN 190

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR-------------I 214
             I A C+ G ++E   +++++   G +    ++N +++G   AKR             +
Sbjct: 191 LVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKV 250

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
            E+LS   QM      P    +  +I  +C+ G+ + AN +L+     G  PN + Y+ +
Sbjct: 251 HEALS---QMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTV 307

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           + G       ++  +L  EM  K+       +  L+   CQ G ++   +  + M  H  
Sbjct: 308 LKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 367

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +P V  Y +++    ++G   +A+ L + M S G KP+T
Sbjct: 368 MPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNT 406



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/226 (20%), Positives = 109/226 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + A  + + +   G   + IS+  ++  +  ++R      +   M++    PN  T  
Sbjct: 386 LIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFN 445

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+I+ LCK G ++  +++L ++    C+P +I  +++I  + +  + EE + LL  M+ K
Sbjct: 446 TIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINK 505

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + I YS + +A  +   ++  + +++ +      +++ +Y   I + C+  + + A
Sbjct: 506 GITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLA 565

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
              +  M + G  P + T+  LI+G A    + E+     ++ SR+
Sbjct: 566 IDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRR 611


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 177/426 (41%), Gaps = 70/426 (16%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGF  S+ + N ++  + K+ R  LVW  ++ ML +   PN ++   LIS LC  G+L+ 
Sbjct: 134 RGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKK 193

Query: 77  YVDMLDRIHGKRCSPMVIVNTSL-----------------------------------IL 101
            V++L  +      P ++   +L                                   I 
Sbjct: 194 AVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFID 253

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
            + +  R  +G ++LK+M  K +  + ++Y+ ++   VK   +  A  V+ EM++   S 
Sbjct: 254 SLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSP 313

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR-------- 213
           N   Y   I  YC  G  EEA  ++  ME   ++P + T   L+ G  K+ +        
Sbjct: 314 NLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL 373

Query: 214 ---------------------------IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
                                      ++E+     +M    + P    F+ +I   C+ 
Sbjct: 374 ERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKV 433

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN  +A  +++    +GF PN + +S LI    K G + E +K Y  M     +      
Sbjct: 434 GNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTC 493

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            SL++SLC+ GKL EA+++   +    LVP    ++ ++  +   G+ + A  + + M+S
Sbjct: 494 NSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMIS 553

Query: 367 EGLKPS 372
            G  PS
Sbjct: 554 CGHHPS 559



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 156/360 (43%), Gaps = 5/360 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +S+NTLI+   K  +  +  R++  M+E    PN  T   LI+  C  G  +  + +LD 
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDV 340

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +      P  +   +L+  + +  + +    +L+R        + I++++++    +   
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGL 400

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A  +  EM K G   +   ++  I  +C+ G I +A  +M ++   G  P +  F+ 
Sbjct: 401 LDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFST 460

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI    K   + E++ +   M            N ++  LCE G   +A   L      G
Sbjct: 461 LIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN +T+  +I GYA  G+      ++  M      P+   Y SL+  LC+     EA 
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 324 KYFKIMKSHSLVPGVDI--YESLVGIHLEKGNKAKALHLCEEMVSEGLKP-STSYLCSAS 380
           K  K  K H +   VD   Y +L+    + GN  +A+ L EEM+   + P S +Y C  S
Sbjct: 581 KLLK--KLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILS 638



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 175/400 (43%), Gaps = 36/400 (9%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA  V   + +   S +LI++N LI+    +   +   R+   M  N   PNE TI TL+
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLL 357

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + L K  +     ++L+R    R S   I +T +I  + +   ++E   LL  M +  + 
Sbjct: 358 NGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVH 417

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI--------------- 170
            D I +S+++    K+ N+  A  V  ++ + GF  N+ +++T I               
Sbjct: 418 PDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKF 477

Query: 171 --------------------GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
                                + CE GK+ EA   +  +   GL P   TF+ +I G A 
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
                 + S  ++M+S    PS   +  +++ LC+  N  +A  +L        + + I+
Sbjct: 538 VGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS 597

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF-KIM 329
           Y+ LI   +K G + E ++L+ EM   +I P    YT ++S L + G+L  A  +  ++M
Sbjct: 598 YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           +   L     +Y   +    + G    AL+L +EM  +GL
Sbjct: 658 QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGL 697



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 4/318 (1%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            +L +FN L+H  ++       +++Y  M  +  +PN  T  +LI  LC  G L+  + ML
Sbjct: 735  NLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKML 794

Query: 82   DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM--LRKNMIHDTIAYSLIVYAKV 139
                 +  +   +    LI +  +   +++ + L   M   R ++  DT     +    V
Sbjct: 795  KMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDT--QKAVTDVLV 852

Query: 140  KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
            +    ++  V   EMLK+GF   S  Y T +   C  G I+ A  L  +M   G+   D 
Sbjct: 853  RRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDA 912

Query: 200  TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
                ++ G A   +IEE++   ++M+  K +P+ S F  ++   C+  N K+A+ +  L 
Sbjct: 913  AECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILM 972

Query: 260  LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
                   + + Y+ LI      G++   L  Y E++ K + P +  Y  L+S++     +
Sbjct: 973  EHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYV 1032

Query: 320  EEADKYFKIMKSHSLVPG 337
               +   K +    LV G
Sbjct: 1033 SRGEIVLKDLNDRGLVSG 1050



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/370 (19%), Positives = 161/370 (43%), Gaps = 7/370 (1%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           ++ + G   + ++F+ +I+           + ++  M+    +P+  T  +L+  LCKG 
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQ 574

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTS---LILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
                  +L ++H   C P+ +   S   LI+ I +   + E + L + M++ N++ D+ 
Sbjct: 575 NFWEARKLLKKLH---CIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRG-FSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            Y+ I+   ++   L  A +    ++++   + NS VYT FI    + G+ + A  L +E
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKE 691

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ME  GL       N + +G ++  ++  + S   +  ++ ++P+ + FN ++       +
Sbjct: 692 MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQD 751

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
                 +  L    GF PN +TY  LI G    G ++  +K+      +S +     +  
Sbjct: 752 IMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNM 811

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI   C+   L++       M+   +    D  +++  + + +           EM+ +G
Sbjct: 812 LIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKG 871

Query: 369 LKPSTSYLCS 378
             P++   C+
Sbjct: 872 FIPTSKQYCT 881



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 99/213 (46%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           S+N  V+   I  Y   G +  A      M   G KP   T N+++    K  R     S
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + +QM++ ++ P+ S+FN +I  LC  G  K+A  +LT+    G+ P  ++Y+ L+    
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+G  +  L L + ME K I   +  Y   I SLC+  +  +     K M++  + P   
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y +L+   +++G    A  +  EM+   L P+
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPN 314



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/358 (19%), Positives = 140/358 (39%), Gaps = 39/358 (10%)

Query: 55  YP----NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIE 110
           YP    N A    LI    + G +   V+    +  +   P V     ++  +++  R  
Sbjct: 98  YPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAH 157

Query: 111 EGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFI 170
                 K+ML   +  +  ++++++        L+ A+ +   M + G+      Y T +
Sbjct: 158 LVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLL 217

Query: 171 GAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
              C+ G+ + A  L+  ME  G++    T+N+ I+   +  R  +     ++M ++ + 
Sbjct: 218 SWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMIT 277

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P+  ++N +I    + G    A  +    ++   SPN ITY+ LI GY   G  +E L++
Sbjct: 278 PNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRV 337

Query: 291 YYEMEYKSISP-----------------------------------TLPAYTSLISSLCQ 315
              ME   + P                                      ++T +I  LC+
Sbjct: 338 LDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCR 397

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            G L+EA +    M    + P +  +  L+    + GN  KA  +  ++  EG  P+ 
Sbjct: 398 NGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNN 455


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 16/377 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ AF + + + ++GF     +++ +I  +  + + +  + ++Q M      P+  T   
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G ++    + + +    CSP V+  T+LI   ++ +++ +   +  RM+   
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS----------------FVYT 167
              + + Y  +V    K  N+  A  VY +++    SA+S                  Y 
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             +   C+  K++ A+ L+  M ++G +P    ++ LI+G  KA +I+ +     QM   
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             LPS   +  +I R+ + G    A  +L+  L    +PN +TY+ +I G  + GE ++ 
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           LKL   ME K  SP +  YT+LI  L + GK++ +   F  M      P    Y  L+  
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628

Query: 348 HLEKGNKAKALHLCEEM 364
               G   KA  L  EM
Sbjct: 629 LCAAGLLDKARLLLGEM 645



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 170/365 (46%), Gaps = 9/365 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+  G+  S +++N L+ V++ + + DL +R+ + M E+    +  T+     ALCK G+
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               +DM++R   K  +   ++ T +I  +++    +E M  L RM   + I + + Y  
Sbjct: 91  WADALDMIEREDFKLDT---VLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   +K + L     +   M+  G + N  ++ + + +YC       A  L+  M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 194 LKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM-----IRRLCECG 247
             P    +N+ I   C + K     L    + +  ++L +    N++      R LC  G
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +A  ++   + KGF P+  TYS +I       ++++   L+ EM+   ++P +  YT
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
            LI S C+ G +E+A   F+ M+S    P V  Y +L+  +L+     +A  +   MV  
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 368 GLKPS 372
           G +P+
Sbjct: 388 GCRPN 392



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 160/374 (42%), Gaps = 22/374 (5%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ TL+    K  +     RI   M+     PN +   +L+ + C          +L
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL------LKRMLRKNMIHDTIAYSLIV 135
           +R+    C P  +V    I  I  +E++    +L         ML  N + + +  +   
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +   + A  + +EM+++GF  ++  Y+  I   C   K+E+A  L QEM+  G+ 
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+ +LI+   KA  IE++    E+M S    P+   +  +I    +     QAN +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM----------------EYKSI 299
               +D G  PN++TY  L+ G  K G I +  ++Y ++                +  ++
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P +  Y +L+  LC+  K++ A +    M S    P   +Y++L+    + G    A  
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500

Query: 360 LCEEMVSEGLKPST 373
           +  +M   G  PS 
Sbjct: 501 VFLQMTKCGYLPSV 514



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 139/341 (40%), Gaps = 35/341 (10%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   L+  LCK  ++    ++LD +    C P  IV  +LI    +  +I+    +
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             +M +   +     Y+ ++    K   L+ A+ V  +MLK   + N   YT  I   C 
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ E+A  L+  ME  G  P   T+  LI+G  KA +I+ SL    QM  +   P+   
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 236 FNEMIRRLCECGNAKQAN---------------------------------GMLTLALDK 262
           +  +I  LC  G   +A                                  G+L      
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME--YKSISPTLPAYTSLISSLCQCGKLE 320
           G  P    Y  LI  ++K G ++  ++L+ EM     S+      Y SLI +LC   ++E
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 741

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           EA + +  M     VP + ++  L+   +E     +AL LC
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLC 782



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 4/301 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I ++ LI    K+ + D    ++  M +    P+  T  +LI  + K G+L   + +L +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +    C+P V+  T++I  + +    E+ + LL  M  K    + + Y+ ++    K   
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ +L ++ +M ++G S N   Y   I   C  G +++A  L+ EM+      Y + +  
Sbjct: 600 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRC 659

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT--LALD 261
            I+G +K+     SL   E+M S   +P    +  +I    + G  + A  +    + + 
Sbjct: 660 AIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP 717

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
                +   Y+ LI       +++E  +LY EM  +   P L  +  LI  L +  K +E
Sbjct: 718 SSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDE 777

Query: 322 A 322
           A
Sbjct: 778 A 778



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 131/280 (46%), Gaps = 10/280 (3%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G+  S+ ++ +LI  + K  R DL  ++   ML++   PN  T   +I  LC+ G+ +  
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +L  +  K CSP V+  T+LI  + +  +I+  + L  +M RK    + + Y +++  
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
                 L+ A ++  EM +  +      Y   I  + +      +  +++EME+ G  P 
Sbjct: 629 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPI 686

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-----SAFNEMIRRLCECGNAKQA 252
              + +LI+  +KA R+E ++   ++MM    +PS        +  +I+ LC     ++A
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEA 743

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
             + +    +GF P    +  LI G  +  +  E L+L Y
Sbjct: 744 FRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 26/230 (11%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   +E++G S +++++  LI  + K+ + DL   ++  M      PN  T R L
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625

Query: 65  ISALCKGGQL-----------QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           I+ LC  G L           QTY      + G RC+      + +    I EE    G 
Sbjct: 626 INHLCAAGLLDKARLLLGEMKQTYWP--KYLQGYRCAIQGFSKSFIASLGILEEMESYGT 683

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK--RGFSANSFVYTTFIG 171
           V +  +           Y +++    K   LE A+ +++EM++       ++ +Y + I 
Sbjct: 684 VPIAPV-----------YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           A C   ++EEA  L  EM   G  P    F  LI+G  + K+ +E+L  C
Sbjct: 733 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLC 782



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 24/269 (8%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + Y+ +V        ++    V +EM + GF  + F    F  A C+ G+  +A   +  
Sbjct: 41  VTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA---LDM 97

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           +E    K        +I G  +A   +E++S+  +M     +P+   +  ++    +   
Sbjct: 98  IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
                 ++ + + +G +PN   ++ L+  Y  E +     KL   M      P    Y  
Sbjct: 158 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217

Query: 309 LISSLCQCGKLEEADK-------YFKIMKSHSLVPGVDIYE---SLVGIHLEKGNKAKAL 358
            I S+C   KL   D        Y +++ ++ ++  V++      L G+    G   KA 
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV----GKFDKAF 273

Query: 359 HLCEEMVSEGLKPSTS-------YLCSAS 380
            L +EM+ +G  P TS       +LC A+
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHAT 302



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 3/144 (2%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           PS   +N +++ L   G       +     + GF  +  T         KEG   + L +
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDM 97

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
               ++K +   L   T +IS L +    +EA  +   M+ +S +P V  Y +L+   L+
Sbjct: 98  IEREDFK-LDTVL--CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 154

Query: 351 KGNKAKALHLCEEMVSEGLKPSTS 374
           K        +   M++EG  P+ S
Sbjct: 155 KKQLGWCKRIINMMMTEGCNPNPS 178


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 168/356 (47%), Gaps = 11/356 (3%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            +F+ LI  + K+ R       Y  MLE    PN   I  L+++LC+ G++   + +   
Sbjct: 4   FTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF-- 61

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--MIHDTIAYSLIVYAKVKM 141
             G +CSP VI    LI    + + +++ + L   M  KN  ++ +   Y+ I+    KM
Sbjct: 62  -RGIQCSPSVITLNILINGFCELQLLDKALELFHEM-EKNFALVPEATTYTAIIKCYCKM 119

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDET 200
             L+ A  + EE      S++    T+    +C+  +++EA  L+ +M E    KP    
Sbjct: 120 DRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL-- 258
           +N++I G  KA R+ E+    E ++S   +P+   +  +I   C+ GN  +A  +  +  
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
           + D    PN +T++ LI G  K   ++   +L  +M+ + +      YT+L+  LC+ G+
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             E  + F+ M      P V  Y +LV  H + G+   A  +   MV++G+ P  +
Sbjct: 298 TSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 169/359 (47%), Gaps = 6/359 (1%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT-LISALCKGGQLQTYV 78
           S S+I+ N LI+   +    D    ++  M +N     EAT  T +I   CK  +L    
Sbjct: 67  SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQAR 126

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML-RKNMIHDTIAYSLIVYA 137
            +L+      CS  VI  TS+     + +R++E   LL  M+ +K+   D +A+++I++ 
Sbjct: 127 QLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHG 184

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG--LK 195
             K   +  A  + E ++  G   N+  YTT I  +C+ G + EA  L + + +     +
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN LI G  KA R+E +    +QM +R L      +  ++  LC+ G   + + +
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L +G +P+ +TY+ L+  + K G +Q+  ++   M  K I P +  YT L+  L +
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            GK+  A ++F+ +      P   +Y +LV    +     +A+    EM+   L P  +
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPA 423



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 9/321 (2%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LI+ LCK G+L   V+  +++  + C P +     L+  + Q  ++++ M +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYC 174
            + +         I  ++++    +++ L+ AL ++ EM K       +  YT  I  YC
Sbjct: 61  FRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL-PSC 233
           +  ++++A  L++E               +  G  KA+R++E+      M+ +K   P  
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVI--AITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
            A+N +I   C+ G  ++A  ML   +  G  PN +TY+ LI G+ K G + E L+L+  
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 294 MEYKS--ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
           +  +     P +  + +LIS LC+  +LE A +  K MK+  L      Y +L+    ++
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
           G  ++   + EEM+ EG  PS
Sbjct: 296 GRTSEVSRVFEEMLREGCNPS 316



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 129/271 (47%), Gaps = 2/271 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E++     ++++N +IH   K+ R    + + + ++     PN  T  TLI   CK G 
Sbjct: 166 VEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225

Query: 74  LQTYVDMLDRIHGK--RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           L   + +   +  +     P V+   +LI  + + +R+E    L+K+M  +++  DT  Y
Sbjct: 226 LSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    K         V+EEML+ G + +   YTT + A+C+ G +++A  +++ M  
Sbjct: 286 TTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVA 345

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+ +L+EG  +  ++  +  + E+++  +  P    ++ ++R  C+     +
Sbjct: 346 KGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDE 405

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           A       LD+  +P+  T   L+    K G
Sbjct: 406 AVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 3/304 (0%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYV 78
           S  +I+  ++     K+ R D  +++   M+E     P+      +I   CK G+++   
Sbjct: 136 SSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAY 195

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--MIHDTIAYSLIVY 136
           +ML+ +    C P  +  T+LI    +   + E + L K +  ++     + + ++ ++ 
Sbjct: 196 EMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALIS 255

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   LE A  + ++M  R   A++F YTT +   C+ G+  E + + +EM   G  P
Sbjct: 256 GLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNP 315

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  L+    KA  ++++      M+++ + P  + +  ++  L E G  + A    
Sbjct: 316 SVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFF 375

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L +   P  + YS L+ G  K   + E +K Y EM  + ++P       L+  LC+ 
Sbjct: 376 EKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435

Query: 317 GKLE 320
           G+ +
Sbjct: 436 GRTD 439



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 112/243 (46%), Gaps = 2/243 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEATIRTL 64
           A+++   L   G   + +++ TLI    KS       ++++ +     +  PN  T   L
Sbjct: 194 AYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNAL 253

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LCK  +L+   +++ ++  +         T+L+  + ++ R  E   + + MLR+  
Sbjct: 254 ISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGC 313

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               + Y+ +V+A  K  +L+ A  V   M+ +G   +   YT  +    E GK+  A  
Sbjct: 314 NPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATE 373

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             +++      P    ++ L+ GC KA  ++E++ Y  +M+ R+L P  +    ++  LC
Sbjct: 374 FFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLC 433

Query: 245 ECG 247
           + G
Sbjct: 434 KRG 436



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 78/177 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF++ + ++ R       ++ TL+  + K  R   V R+++ ML     P+  T  T
Sbjct: 263 LEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTT 322

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+ A CK G LQ    ++  +  K   P V   T L+  + +  ++       +++LR+ 
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                + YS +V    K   ++ A+  Y EML R  + +       +   C+ G+ +
Sbjct: 383 CPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 164/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G+  +  ++  L+ +  +  + +   ++   M +N   P   T   +++A C+ G+
Sbjct: 256 MKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGR 315

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   V + + +  K C P V    +++       ++ + M LL +M    +  D + Y+L
Sbjct: 316 MSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNL 375

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++  +    ++ESA  +   M   G +A+ + Y   I A C+ GK++EA  L   +E  G
Sbjct: 376 LIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   TFN +I G  K  + + + ++ E+M+S    P    ++  I  LC+   +++  
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +   L K   P+ + Y+ +I    KE       +++ +M     SP +  YT+ + + 
Sbjct: 496 SFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAY 555

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G+L EA+     MK   ++     Y +L+  H   G    A+ + + M      P+
Sbjct: 556 CNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN 614



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 166/365 (45%), Gaps = 7/365 (1%)

Query: 12  RYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           RYL    + G+     +FN+LI    ++ + D+   ++  M       +  +   LI   
Sbjct: 150 RYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGF 209

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G++   +++   +      P +  + +L+  +    R EEG+ +L++M        T
Sbjct: 210 CETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPAT 265

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            AY+ +V    + +  E A  +  EM   G    +   T  + AYC  G++  A  + + 
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M+  G +P   T+N +++G     ++ ++++  +QM    + P    +N +IR  C  G+
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +L L    G + ++ TY+ LI    K G++ E   L+  +EY+ I P    + +
Sbjct: 386 IESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT 445

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+ LC+ GK + A  + + M S    P    Y   +    +     + L   +EM+ + 
Sbjct: 446 VINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKD 505

Query: 369 LKPST 373
           +KPST
Sbjct: 506 VKPST 510



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 154/369 (41%), Gaps = 4/369 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            +VA D+   +  RGFS   +S+  LI    ++ R D    +++ + +    P+  T   
Sbjct: 180 LDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAA 235

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LC   + +  + ML ++      P      +L+    +E++ EE   +L  M    
Sbjct: 236 LVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG 295

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++   +  + +V A  +   +  A+ V+E M  +G   N + Y   +  +C  GK+ +A 
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ +M   G++P   T+NLLI G      IE +      M    L      +N +I  L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +      +G  PN +T++ +I G  K G+         +M     +P  
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDT 475

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+  I +LC+     E   +   M    + P    Y  ++    ++ N   A  +  +
Sbjct: 476 YTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQ 535

Query: 364 MVSEGLKPS 372
           MVS G  P 
Sbjct: 536 MVSLGCSPD 544



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 167/383 (43%), Gaps = 22/383 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF + R +E  G +    ++N LI  + K+ + D    ++  +      PN  T  T+
Sbjct: 387 ESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCKGG+       L+++    C+P     +  I  + + +   EG+  +  ML+K++
Sbjct: 447 INGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV 506

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
              T+ Y++++    K RN   A  ++ +M+  G S +   YTT + AYC  G++ EA  
Sbjct: 507 KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN 566

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++ EM+  G+      +N LI+G     + + +++  + M     +P+   F  ++R L 
Sbjct: 567 VVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLL 626

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +   A+               P + T         K  E+ +V +L+  M+  S+  +  
Sbjct: 627 QRRLAEDV-------------PLKTT------SVWKTIELADVFELFELMKKNSVPSSAR 667

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           AY +++    +  +L+E       MK   L    DIY SLV    +      A  L   M
Sbjct: 668 AYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSM 727

Query: 365 VSEGLKP---STSYLCSASTCRG 384
           +  G  P   S  YL S  T  G
Sbjct: 728 IGHGFLPNLISYQYLLSGFTAEG 750



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 146/346 (42%), Gaps = 40/346 (11%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLEN-IRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +F +L+   ++     L+ R++ HM  +    P  AT   LI ALC+   L+        
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLR-------- 146

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
            H +R                           L  M+R     D   ++ ++    + + 
Sbjct: 147 -HAQR--------------------------YLSLMVRSGWRPDAFTFNSLILGYCRTQQ 179

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A  ++++M  RGFS ++  Y   I  +CE G+++EA  L +E+E    +P   T   
Sbjct: 180 LDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAA 235

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           L++G   A+R EE L   ++M      P+  A+  ++   C    A++A  ML    D G
Sbjct: 236 LVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG 295

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P  +T + ++  Y +EG +   ++++  M+ K   P +  Y +++   C  GK+ +A 
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
                M+   + P V  Y  L+      G+   A  L   M   GL
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGL 401



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 4/176 (2%)

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T+N LI    +   +  +  Y   M+     P    FN +I   C       A  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                 +GFS + ++Y+ LI G+ + G + E L+L+ E+E     P +  + +L+  LC 
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCD 242

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             + EE     + MK     P    Y +LV +   +    +A  +  EM   GL P
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVP 298



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 74/143 (51%), Gaps = 4/143 (2%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P+ + +N +IR LC   + + A   L+L +  G+ P+  T++ LI GY +  ++     L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           + +M  +  S    +Y +LI   C+ G+++EA + F+ ++     P +  + +LV    +
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242

Query: 351 KGNKAKALHLCEEMVSEGLKPST 373
                + L++ ++M   G +P+T
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPAT 265


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 165/378 (43%), Gaps = 11/378 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R +++     +++ ++ ++  + K   +     I+  M E   +PN  T   +I 
Sbjct: 64  ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMID 123

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C  G+      +L  +  +   P V+  ++LI   ++E ++     L + MLR+N+  
Sbjct: 124 GYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFP 183

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG-----------AYCE 175
            TI YS ++    K   LE A  +++ M+ +G S +     T I             +C+
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQ 243

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G +  A  L QEM + G+ P   T N L+ G  +  ++E++L   +     K+    + 
Sbjct: 244 VGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTAT 303

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
            N +I  +C+     +A  +       G   + +TY+ LIG + KEG       +Y EM 
Sbjct: 304 CNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEML 363

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K I P+   Y S++   C+  +LEEA +    M S    P V  + +L+  + + G   
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVD 423

Query: 356 KALHLCEEMVSEGLKPST 373
             L L  EM   GL   T
Sbjct: 424 DGLELFSEMCQRGLVADT 441



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 162/362 (44%), Gaps = 24/362 (6%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R     +++F+ LI+   K  +      +Y+ ML    +P   T  ++I   CK 
Sbjct: 139 RDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKH 198

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
            +L+    M D +  K CSP +I   +LI          +G    KR L           
Sbjct: 199 SRLEDAKHMFDLMVSKGCSPDIITLNTLI----------DGCCRAKRHL----------- 237

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
              ++   ++ N+  A  +++EM+  G S +     T +   CE GK+E+A  + +  + 
Sbjct: 238 ---IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           + +     T N++I G  K  +++E+      +    +      +N +I    + GN  +
Sbjct: 295 SKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLR 354

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    L KG  P+ +TY+ ++ G+ K+  ++E  ++   M  +  SP +  +++LI 
Sbjct: 355 AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
             C+ G++++  + F  M    LV     Y +L+    + G+   A  + EEMVS G+ P
Sbjct: 415 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCP 474

Query: 372 ST 373
            T
Sbjct: 475 DT 476



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 165/371 (44%), Gaps = 46/371 (12%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M+E     N  T  TL++ LC+ G++   + ++DR+  +   P  +   +++  + +   
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
               + +L++M    +  + + YS IV    K  N   A  ++ EM ++G   N   Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  YC YGK  +A  L+++M    + P   TF+ LI    K  ++  +     +M+ R 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS-----------HLIGG 277
           + P+   ++ MI   C+    + A  M  L + KG SP+ IT +           HLI G
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL--- 334
           + + G +     L+ EM    +SP +    +L++ LC+ GKLE+A + FK+ +   +   
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 335 ----------------------------VPGVD----IYESLVGIHLEKGNKAKALHLCE 362
                                       V GV+     Y  L+G+ +++GN  +A  +  
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 363 EMVSEGLKPST 373
           EM+ +G+ PST
Sbjct: 361 EMLCKGIIPST 371



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 141/298 (47%), Gaps = 12/298 (4%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRN-----------DLVWRIYQHMLENIRYPNEATIRTLI 65
           +G S  +I+ NTLI    ++ R+           ++   ++Q M+ N   P+  T  TL+
Sbjct: 214 KGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLL 273

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LC+ G+L+  ++M       +          +I  + +  +++E   L   +    + 
Sbjct: 274 AGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVE 333

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y++++   VK  N   A  +Y EML +G   ++  Y + +  +C+  ++EEA  +
Sbjct: 334 TDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQM 393

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M + G  P   TF+ LI+G  KA R+++ L    +M  R L+     +N +I   C+
Sbjct: 394 VDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCK 453

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            G+   A  +    +  G  P+ IT+  ++ G   + E+Q+ L +  +++ KS+   L
Sbjct: 454 VGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQ-KSVDHEL 510



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/322 (20%), Positives = 139/322 (43%), Gaps = 11/322 (3%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +R    + I+++++I    K  R +    ++  M+     P+  T+ TLI   C+ 
Sbjct: 174 REMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRA 233

Query: 72  -----------GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
                      G +    D+   +     SP ++   +L+  + +  ++E+ + + K   
Sbjct: 234 KRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQ 293

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +  M  DT   ++I+    K   ++ A  ++  +   G   +   Y   IG + + G   
Sbjct: 294 KSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFL 353

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  +  EM   G+ P   T+N +++G  K  R+EE+    + M+S    P    F+ +I
Sbjct: 354 RAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLI 413

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +  C+ G       + +    +G   + ITY+ LI G+ K G++     ++ EM    + 
Sbjct: 414 KGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVC 473

Query: 301 PTLPAYTSLISSLCQCGKLEEA 322
           P    + S+++ LC   +L++ 
Sbjct: 474 PDTITFRSMLAGLCTKAELQKG 495



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 94/186 (50%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+D+   L   G    ++++N LI V  K         IY  ML     P+  T  +++ 
Sbjct: 320 AWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVD 379

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK  +L+    M+D +  + CSP V+  ++LI    +  R+++G+ L   M ++ ++ 
Sbjct: 380 GFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVA 439

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DTI Y+ +++   K+ +L  A  ++EEM+  G   ++  + + +   C   ++++   ++
Sbjct: 440 DTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499

Query: 187 QEMENA 192
           ++++ +
Sbjct: 500 EDLQKS 505



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/221 (20%), Positives = 98/221 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A ++ +  ++    L   + N +I+ + K ++ D  W ++  +  N    +  T   
Sbjct: 282 LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNI 341

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    K G      D+   +  K   P  +   S++    ++ R+EE   ++  M+ + 
Sbjct: 342 LIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + +S ++    K   ++  L ++ EM +RG  A++  Y   I  +C+ G +  A 
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            + +EM ++G+ P   TF  ++ G      +++ L+  E +
Sbjct: 462 DIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL 502



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 1/119 (0%)

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           ++ G   N +T++ L+ G  +EG + + L L   M  +   P    Y ++++ +C+ G  
Sbjct: 2   VETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDT 61

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLC 377
             A    + M    +   V IY ++V    + GN  KA ++  EM  +G+ P+  +Y C
Sbjct: 62  VSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 188/379 (49%), Gaps = 5/379 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR    AF V   + +RGF+ ++ + N L+  + ++        + + M  N   P+  +
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             T+I   C+G +L+  +++ + + G  CS  ++    LI    +  +++E M  LK M 
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  D + Y+ ++        L+    +++E+L+RG S  +  Y T I  +C+ G+++
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA+ + + M   G++P   T+  LI+G     + +E+L     M+ +   P+   +N +I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-- 298
            +LC+ G    A  ++ L   +   P+ ITY+ L+GG   +G++ E  KL Y M   S  
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES-LVGIHLEKGNKAKA 357
             P + +Y +LI  LC+  +L +A   + ++    L  G  +  + L+   L+ G+  KA
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLL-VEKLGAGDRVTTNILLNSTLKAGDVNKA 478

Query: 358 LHLCEEMV-SEGLKPSTSY 375
           + L +++  S+ ++ S +Y
Sbjct: 479 MELWKQISDSKIVRNSDTY 497



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 138/319 (43%), Gaps = 35/319 (10%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           S +     +L+ ++++    E      ++ML  +   + ++ S ++   V+MR    A  
Sbjct: 69  SSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFG 128

Query: 150 VYEEMLKRGFSAN-----------------------------------SFVYTTFIGAYC 174
           V   MLKRGF+ N                                    F Y T I  +C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           E  ++E+A  L  EM+ +G      T+ +LI+   KA +++E++ + ++M    L     
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +  +IR  C+CG   +   +    L++G SP  ITY+ LI G+ K G+++E  +++  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             + + P +  YT LI  LC  GK +EA +   +M      P    Y  ++    + G  
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368

Query: 355 AKALHLCEEMVSEGLKPST 373
           A A+ + E M     +P  
Sbjct: 369 ADAVEIVELMKKRRTRPDN 387



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 174/375 (46%), Gaps = 4/375 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++  ++ +RG   ++ ++  LI  +    +     ++   M+E    PN  T   +I+
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--M 124
            LCK G +   V++++ +  +R  P  I    L+  +  +  ++E   LL  ML+ +   
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I+Y+ +++   K   L  AL +Y+ ++++  + +       + +  + G + +A  
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++ ++ +    +T+  +I+G  K   +  +     +M   +L PS   +N ++  LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 245 ECGNAKQANGMLT-LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           + G+  QA  +   +  D  F P+ ++++ +I G  K G+I+    L   M    +SP L
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI+   + G L+EA  +F  M      P   I +S++   + +G   K   L ++
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659

Query: 364 MVSEGLKPSTSYLCS 378
           +V + +       C+
Sbjct: 660 LVDKDIVLDKELTCT 674



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/399 (22%), Positives = 164/399 (41%), Gaps = 38/399 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    L+ + +LI         D    ++  +LE    P   T  TLI   CK GQL+  
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++ + +  +   P V   T LI  +    + +E + LL  M+ K+   + + Y++I+  
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-------- 189
             K   +  A+ + E M KR    ++  Y   +G  C  G ++EA+ L+  M        
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421

Query: 190 ---------------EN---AGLKPYD-----------ETFNLLIEGCAKAKRIEESLSY 220
                          EN     L  YD            T N+L+    KA  + +++  
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            +Q+   K++ +   +  MI   C+ G    A G+L         P+   Y+ L+    K
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           EG + +  +L+ EM+  +  P + ++  +I    + G ++ A+     M    L P +  
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           Y  L+   L+ G   +A+   ++MV  G +P  +++C +
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPD-AHICDS 639


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 135/271 (49%)

Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
           R  +E  I     +   + +  +    ++Y+ ++   +++ +L+    +   M   G   
Sbjct: 151 RFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXP 210

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           + + Y+  I   C+  K++ AN L  EM   GL P   TF  LI+G  K  R++ ++   
Sbjct: 211 DVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 270

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           +QM+S+ LLP    +N +I  LC+ G+  QA+ ++     KG  P++ITY+ LI G  KE
Sbjct: 271 KQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKE 330

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P    Y
Sbjct: 331 GDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTY 390

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             ++    +KG+  K   L +EM  +G  PS
Sbjct: 391 TMIINEVCKKGDVGKGSKLLKEMQXDGHAPS 421



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 145/312 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +       + G+  SL  FN L H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +H     P V   + LI  + +E +++    L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y T I   C+ G + 
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLN 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 300 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  M+   L  G  P+  TY+ +I    K+G++ +  KL  EM+    +
Sbjct: 360 SGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHA 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 108/232 (46%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +      +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L +A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 298 LNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
            MIH    + +   AK      V  +   SA  V+  +L  K    ++ +V++  I AY 
Sbjct: 24  TMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGNQRSDIYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 84  ESGFLRDAVECYRLTREHKFWLPFD-TCRKVLEHLMKLKYFKLVWGFYEEFLECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN +  R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  KL   
Sbjct: 143 YFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K++ A++ F  M    LVP    + +L+  H + G 
Sbjct: 203 MHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 263 VDLAMEIYKQMLSQSLLPD 281


>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 567

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 163/363 (44%), Gaps = 38/363 (10%)

Query: 50  LENIRYP-NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +E+  YP N  T  TL+  LC  G L   +  LDR+  K   P     +SL+    +E  
Sbjct: 158 MEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERG 217

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           + E M LL  ++ K    + ++Y++++    K   +E A+ +++ +  +GFS N   Y  
Sbjct: 218 VNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNI 277

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            + + C  G+ EEAN L+ EM      P   T+N+LI   A   +IE++L   ++MM   
Sbjct: 278 LLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGP 337

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+ +++N +I RLC+ G  +     L   +    SPNE T+ + I     EG++QE  
Sbjct: 338 FKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTF-NAIAVLCYEGKVQEAF 396

Query: 289 K-----------------------------------LYYEMEYKSISPTLPAYTSLISSL 313
                                               L YEM     +P    Y+SLI  L
Sbjct: 397 SLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGL 456

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
           C  G L EA + FK+++     P +D + +L+    +      +L + E M+ +G  PS 
Sbjct: 457 CIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSE 516

Query: 373 TSY 375
           T+Y
Sbjct: 517 TTY 519



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 173/373 (46%), Gaps = 2/373 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR+ +  F +  ++ + G    ++    L++ + KS++     R+ + M+     P+ A+
Sbjct: 76  MRISDAFFHL-EHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAAS 134

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L++ LCK G +   + +++++         +   +L+  +     + + +  L R++
Sbjct: 135 YTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLM 194

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +K ++ +   YS ++ A  K R +  A+ + +E++ +G   N   Y   +   C+ G+IE
Sbjct: 195 QKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIE 254

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L + + + G  P   ++N+L+       R EE+     +M  R+  PS   +N +I
Sbjct: 255 EAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILI 314

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             L   G  +QA  ++   +   F P   +Y+ +I    KEG+++ V+    +M +   S
Sbjct: 315 GSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCS 374

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    + + I+ LC  GK++EA    + + +       D Y+ +V    +KGN   A  L
Sbjct: 375 PNEGTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLL 433

Query: 361 CEEMVSEGLKPST 373
             EM   G  P +
Sbjct: 434 LYEMTKYGFTPDS 446



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 138/272 (50%), Gaps = 1/272 (0%)

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           ++ RI +    L+ +++     D +  + ++Y   K   ++ A+ V E M+  G   ++ 
Sbjct: 74  RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAA 133

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            YT  +   C+ G +  A  L+++ME++G      T+N L++G      + +SL + +++
Sbjct: 134 SYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRL 193

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           M + L+P+   ++ ++    +     +A  +L   + KG  PN ++Y+ L+ G  KEG I
Sbjct: 194 MQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRI 253

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           +E ++L+  +  K  SP + +Y  L+ SLC  G+ EEA++    M      P +  Y  L
Sbjct: 254 EEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNIL 313

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
           +G     G   +AL + +EM+    KP+ TSY
Sbjct: 314 IGSLAFHGKIEQALQVIDEMMMGPFKPTATSY 345



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P V+  T L+  + +  ++++ + +++ M+   +I D  +Y+ +V    K  N+  A+ +
Sbjct: 95  PDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQL 154

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
            E+M   G+ AN+  Y T +   C +G + ++   +  +   GL P   T++ L+E   K
Sbjct: 155 VEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYK 214

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
            + + E++   ++++++   P+  ++N ++  LC+ G  ++A  +      KGFSPN ++
Sbjct: 215 ERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVS 274

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ L+     EG  +E  +L  EM  +  SP++  Y  LI SL   GK+E+A +    M 
Sbjct: 275 YNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMM 334

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV------SEGLKPSTSYLC 377
                P    Y  ++    ++G     ++  ++M+      +EG   + + LC
Sbjct: 335 MGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLC 387



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 162/358 (45%), Gaps = 9/358 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L Q+G   +  ++++L+    K    +   R+   ++     PN  +   L++ LCK G+
Sbjct: 193 LMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGR 252

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++  + +   +  K  SP V+    L+  +  E R EE   LL  M  +      + Y++
Sbjct: 253 IEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNI 312

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEMENA 192
           ++ +      +E AL V +EM+   F   +  Y   I   C+ GK+E   NCL Q M   
Sbjct: 313 LIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQ-MIFG 371

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
              P + TFN +   C + K ++E+ S  + + +++       +  ++  LC+ GN   A
Sbjct: 372 RCSPNEGTFNAIAVLCYEGK-VQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPA 430

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L      GF+P+  TYS LI G   EG + E ++++  +E     P +  + +LI  
Sbjct: 431 FLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILG 490

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG--IHLEKGNKA----KALHLCEEM 364
            C+  + + + + F++M      P    Y  LV   IH E+   A    + LHL + M
Sbjct: 491 FCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLRQVM 548



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 40/241 (16%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +E A ++   +  R  S S++++N LI  +    + +   ++   M+     P   +   
Sbjct: 288 WEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNP 347

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK- 122
           +I+ LCK G+++  V+ LD++   RCSP      ++ + +  E +++E   L++ +  K 
Sbjct: 348 IIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAV-LCYEGKVQEAFSLIQSLGNKQ 406

Query: 123 -NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
            + IHD   Y  +V    K  N   A ++  EM K GF+ +S+ Y++ I   C  G + E
Sbjct: 407 NSSIHDY--YKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYE 464

Query: 182 A-------------------NCLM----------------QEMENAGLKPYDETFNLLIE 206
           A                   N L+                + M   G  P + T+ +L+E
Sbjct: 465 AMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVE 524

Query: 207 G 207
           G
Sbjct: 525 G 525



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ + LE+  +   + +FN LI    KS R DL   +++ M+E    P+E T   L+ 
Sbjct: 465 AMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVE 524

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
            +    + +   ++L  +H ++     +++ S + R+I +  +E   V
Sbjct: 525 GIIHEEEKELAAEVLRELHLRQ-----VMSQSTVERLIMQYDLEGAPV 567


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 169/370 (45%), Gaps = 9/370 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR----IYQHMLENIRYPNEATIR 62
           A+++CR +  +G   S       + +V K   ND  W+    +++ M ++   P+  T  
Sbjct: 351 AYELCRQMTGQGLLPSTFE----LSLVLKGLLNDRRWKDAVCLFEEMADS-GLPDVFTYN 405

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   C+  +L+  +++ DR+      P +    SL++   ++  ++E + L   M  +
Sbjct: 406 NLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPME 465

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               + + Y  ++   +  ++ ++A  + +EM + G S N + Y   I   C   ++ E 
Sbjct: 466 GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEV 525

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + +++   + G  P   T+N +I G  KA  +  + +  +QM  + L P+   +   I  
Sbjct: 526 DGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDG 585

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            C  G +  A  ML     +G  P+ + Y+ LI G+ +EG +   L+L   +    ++P 
Sbjct: 586 YCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPN 645

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              Y SLI+       ++E  K+++ M    +V     Y +L+    + GN A AL L  
Sbjct: 646 TVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYS 705

Query: 363 EMVSEGLKPS 372
           EM+++G  P 
Sbjct: 706 EMMAKGYIPD 715



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 165/370 (44%), Gaps = 1/370 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +++ G   S+ ++N+L+    K    D   ++Y  M      PN  T  TL+ 
Sbjct: 420 ALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMR 479

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                        +LD +     S        LI  I   +R+ E   +LK  + +  I 
Sbjct: 480 GYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIP 539

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ I+   VK   + SA  VY++M ++G   N   YT+FI  YC  G  + A  ++
Sbjct: 540 TMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKML 599

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            ++   GL+P    +N LI G  +   +  +L     ++   L P+   +N +I      
Sbjct: 600 NDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNL 659

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+ +      +  G   +  TY+ LI G++K+G +   L+LY EM  K   P    +
Sbjct: 660 NMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTF 719

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+L   LC+ G ++ A K  + M+   + P V IY  L+  +L      +A  L +EM++
Sbjct: 720 TALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLN 779

Query: 367 EGLKP-STSY 375
            G++P  T+Y
Sbjct: 780 MGIQPDDTTY 789



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 172/402 (42%), Gaps = 36/402 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +++ GF     ++ T++ V+ K+ R +   R+   M +  +  +     TL+ 
Sbjct: 246 ALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMR 305

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C   ++   +++          P  ++   LI    Q    ++   L ++M  + ++ 
Sbjct: 306 GYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLP 365

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            T   SL++   +  R  + A+ ++EEM   G   + F Y   I  +C+  K+ EA  L 
Sbjct: 366 STFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLF 424

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP--------------- 231
             M+ AG+KP   T+N L+ G  K   ++E++    +M      P               
Sbjct: 425 DRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAK 484

Query: 232 ------------------SCS--AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
                             SC+   +N +I  +C      + +GML   + +GF P  +TY
Sbjct: 485 KDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTY 544

Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           + +I G+ K G +     +Y +M  K + P +  YTS I   C+ G  + A K    ++ 
Sbjct: 545 NSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRR 604

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             L P +  Y +L+    ++GN + AL L   ++ +GL P+T
Sbjct: 605 RGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNT 646



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 150/359 (41%), Gaps = 36/359 (10%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           Y HM+     P+  +   L+    +G   +  + +   + G+       +  +L+   ++
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           E   E+ + L   M    +  D   Y+L + A  K+ +   AL +  EM + GF    F 
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT 264

Query: 166 YTTFIGAYCEYGKIEEA-------------------------NCLMQEMENA-------- 192
           Y T +    + G++EEA                          CL QE+ NA        
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324

Query: 193 --GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G+ P    + +LI GC +    +++   C QM  + LLPS    + +++ L      K
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +     D G  P+  TY++LI  + +  +++E L L+  M+   + P++  Y SL+
Sbjct: 385 DAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
              C+ G ++EA K +  M      P V  Y +L+  ++ K +   A  L +EM   G+
Sbjct: 444 MGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 1/347 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   GF  +++++ TL+         D  + +   M +N    N+ T   LI+ +C   +
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR 521

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     ML     +   P ++   S+I   ++   +     + ++M  K +  + I Y+ 
Sbjct: 522 VCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTS 581

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            +    +    + AL +  ++ +RG   +   Y   I  +C+ G +  A  L+  +   G
Sbjct: 582 FIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG 641

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P    +N LI G      ++E   + E M+   ++   S +  +I    + GN   A 
Sbjct: 642 LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            + +  + KG+ P+  T++ L  G  + G+I    KL  EM    + P +  Y  LI+  
Sbjct: 702 ELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY 761

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH-LEKGNKAKALH 359
            +  KL+EA +    M +  + P    Y+ LV    LE  N A  L+
Sbjct: 762 LRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEADNCADVLN 808



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 117/243 (48%), Gaps = 1/243 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V + + ++G   ++I++ + I    ++  +D+  ++   +      P+      LI+
Sbjct: 560 AFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALIN 619

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G +   + +L  +     +P  +V  SLI        ++E     + M++  ++ 
Sbjct: 620 GFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVA 679

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT  Y+ ++    K  N+  AL +Y EM+ +G+  ++F +T      C  G I+ A  L+
Sbjct: 680 DTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLL 739

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI-RRLCE 245
           +EM    ++P    +N+LI G  +  +++E+    ++M++  + P  + ++ ++ ++  E
Sbjct: 740 EEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLE 799

Query: 246 CGN 248
             N
Sbjct: 800 ADN 802



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 44/335 (13%)

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
            TY  M+ R       P +   T L++R  +    ++ + L   M  +    D   +  +
Sbjct: 143 DTYAHMVAR----GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           + A +K    E A+ +++EM       +  VY   I A C+ G    A  +++EM+  G 
Sbjct: 199 MSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGF 258

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC---ECGNAKQ 251
              D T+  +++   K  R+EE+L   ++M              ++R  C   E GNA  
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALN 318

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT--------- 302
              +    L  G  P ++ Y  LI G  + G  Q+  +L  +M  + + P+         
Sbjct: 319 ---LFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLK 375

Query: 303 ----------------------LP---AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
                                 LP    Y +LI   CQ  KL EA   F  MK   + P 
Sbjct: 376 GLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++ Y SL+  + +KG   +A+ L  EM  EG KP+
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPN 470



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 95/228 (41%)

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +A   Y  M+ RG   +    T  +         ++A  L  EM   G +     F+ L+
Sbjct: 140 AATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALM 199

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
             C K    E+++   ++M   ++ P    +   I  LC+ G+  +A  ML    + GF 
Sbjct: 200 SACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFD 259

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
             + TY  ++    K G ++E L++  EM        +   T+L+   C   ++  A   
Sbjct: 260 TCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNL 319

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           FK      +VP   +Y  L+    + G   KA  LC +M  +GL PST
Sbjct: 320 FKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPST 367


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 156/359 (43%), Gaps = 35/359 (9%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + G  L+   +N+L+   T+   +D V  + + M      P   T   L+  L + G 
Sbjct: 174 LPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGD 233

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +                                 ++E    +   M RKN+  D   YS 
Sbjct: 234 IS--------------------------------KVE---AVYDEMKRKNVAGDVYFYSA 258

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  +  N+  A  V++E +  G   N   Y   I  +C+ G+IE A  L+ +M+  G
Sbjct: 259 VINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRG 318

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +      FN +I+G  +   +E++L     M    +      +N +   LC     + A 
Sbjct: 319 VGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAK 378

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L +  +KG +PN ++Y+ LI  +AKEG++ E  +L+ +ME K   P++  Y  +I   
Sbjct: 379 KLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGY 438

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + G + EA+++ K M+   LVP +  Y  LV  H   G    AL L EEM   G KP+
Sbjct: 439 IKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPN 497



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 152/333 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E RG   ++ ++  L+  ++++     V  +Y  M       +      +I+A C+GG 
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++   ++ D   G    P      +LI    +  +IE   +LL  M  + + H+ I ++ 
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +   +E AL +   M K G   + + Y T     C   ++E+A  L+  M   G
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++  LI   AK   + E+      M  +   PS   +N MI    + G+ ++A 
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                   KG  P+  TY+ L+ G+   G++   L+L+ EM+++   P + AYT+L+S L
Sbjct: 449 RFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGL 508

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            + G+ EEA + +  M +  L P   +Y  LVG
Sbjct: 509 AKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVG 541



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 122/258 (47%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PNE T   LI+  CK GQ++    +L  +  +      IV  ++I    +   +E+ + +
Sbjct: 286 PNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEI 345

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              M +  +  D   Y+ +     ++  +E A  +   M ++G + N   YTT I  + +
Sbjct: 346 KAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAK 405

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G + EA  L ++ME  G +P   T+N++I+G  K   I E+  + ++M  + L+P    
Sbjct: 406 EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYT 465

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  ++   C  G    A  +      +G  PN + Y+ L+ G AKEG  +E  +LY +M 
Sbjct: 466 YAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDML 525

Query: 296 YKSISPTLPAYTSLISSL 313
              ++P    Y+ L+ SL
Sbjct: 526 AAGLTPDDTLYSVLVGSL 543



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 35/279 (12%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           ++ S++V    K  +++ A  + +E+ + G   N+  Y + + +Y      +    L++E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           MEN G++P   T+ +L++G ++A  I +  +  ++M  + +      ++ +I   C  GN
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ----------------------- 285
            ++A+ +    +  G  PNE TY  LI G+ K G+I+                       
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 286 ------------EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
                       + L++   ME   I   +  Y +L   LC+  ++E+A K   IM    
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           + P    Y +L+ IH ++G+  +A  L  +M  +G +PS
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPS 427



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 94/203 (46%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A ++   +E+ G  L + ++NTL   + + +R +   ++   M E    PN  +  
Sbjct: 338 MVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYT 397

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLIS   K G +     +   + GK   P V+    +I   I+   I E     K M +K
Sbjct: 398 TLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKK 457

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++ D   Y+ +V+       ++ AL ++EEM  RG   N   YT  +    + G+ EEA
Sbjct: 458 GLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEA 517

Query: 183 NCLMQEMENAGLKPYDETFNLLI 205
             L  +M  AGL P D  +++L+
Sbjct: 518 FQLYDDMLAAGLTPDDTLYSVLV 540


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 165/350 (47%), Gaps = 2/350 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + +E RG   +L++ N LI+   +       + ++  +L+    PN  T  TLI  LC  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           GQ+   ++  D++         I   +LI  + +       + LL+R+  K +  + + Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S I+    K +++  A  +Y EM+ +G S N   Y+  I  +   GK+++A  L  +M +
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             +KP   TFN+L++   K+ +I  +L   ++M  R   P+   ++ ++  LC+     +
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +LT   D+G  PN  TY+ LI G    G++++   ++ ++  K    T+  Y  +  
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFY 410

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG--NKAKALH 359
             C+ G  +EA      M+ +  +P    YE +     +KG  + A+ LH
Sbjct: 411 GFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLH 460



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 154/324 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           + L   AF V   + + G++ + I+F TLI  +    +       +  ++      N+ +
Sbjct: 135 LGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQIS 194

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI  LCK G+ +  +D+L R+ GK   P V++ +++I  + +++ + +   L   M+
Sbjct: 195 YGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 254

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +  + + YS ++     +  L+ A+ ++ +M+      + + +   +  +C+ GKI 
Sbjct: 255 SKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKIS 314

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+ EM + G  P   T++ +++   K  R++++++   ++  + + P+   +  +I
Sbjct: 315 YALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILI 374

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G  + A  +    L KG+    +TY  +  G+ K+G   E   L  +ME     
Sbjct: 375 DGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCI 434

Query: 301 PTLPAYTSLISSLCQCGKLEEADK 324
           P    Y  +  SL + G+ + A+K
Sbjct: 435 PDAKTYELIKLSLFKKGENDMAEK 458



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 129/264 (48%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ + L   +LR+N     I ++ I+ + VK ++  + L + ++M  RG   N      
Sbjct: 68  VDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C+ G I  A  +  ++   G  P   TF  LI+G     +I ++L++ +++++  
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
              +  ++  +I  LC+ G  + A  +L     K   PN + YS +I G  K+  + +  
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
            LY EM  K ISP +  Y++LIS     GKL++A   F  M S ++ P V  +  LV + 
Sbjct: 248 DLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVF 307

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            + G  + AL L +EM   G  P+
Sbjct: 308 CKSGKISYALKLVDEMHDRGQPPN 331



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 143/317 (45%), Gaps = 4/317 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           I FN ++  + KS     V  + + M      PN      LI+  C+ G +     +  +
Sbjct: 88  IEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAK 147

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           I     +P  I  T+LI  +  + +I + +    +++      + I+Y  ++    K+  
Sbjct: 148 ILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGE 207

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
             +AL +   +  +    N  +Y+T I   C+   + +A  L  EM + G+ P   T++ 
Sbjct: 208 TRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 267

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G     ++++++    +M+S  + P    FN ++   C+ G    A  ++    D+G
Sbjct: 268 LISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG 327

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN +TYS ++    K   + + + L  +++ + I P +  YT LI  LC  GKLE+A 
Sbjct: 328 QPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDAR 387

Query: 324 KYFKIMKSHSLVPGVDI 340
             F+ +    LV G DI
Sbjct: 388 NIFEDL----LVKGYDI 400



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/283 (20%), Positives = 136/283 (48%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           +P  I    ++  +++ +     + L K+M  + +  + +  ++++    ++  +  A  
Sbjct: 84  TPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFS 143

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           V+ ++LK G++ N+  +TT I   C  G+I +A     ++   G +    ++  LI+G  
Sbjct: 144 VFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLC 203

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K      +L    ++  + + P+   ++ +I  +C+  +   A  + +  + KG SPN +
Sbjct: 204 KVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 263

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TYS LI G+   G++++ + L+ +M  ++I P +  +  L+   C+ GK+  A K    M
Sbjct: 264 TYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEM 323

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 P +  Y S++    +     KA+ L  ++  +G++P+
Sbjct: 324 HDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPN 366



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/344 (19%), Positives = 153/344 (44%), Gaps = 3/344 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S +T  H  + +D +D V  ++  +L     P       ++ +L K     T + +  ++
Sbjct: 57  STSTTFH--SNNDVDDAV-SLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKM 113

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P ++    LI    Q   I     +  ++L+     +TI ++ ++        +
Sbjct: 114 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQI 173

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             AL  +++++  GF  N   Y T I   C+ G+   A  L++ ++   ++P    ++ +
Sbjct: 174 HQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTI 233

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K K + ++     +M+S+ + P+   ++ +I      G  K A  +    + +  
Sbjct: 234 IDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENI 293

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P+  T++ L+  + K G+I   LKL  EM  +   P +  Y+S++ +LC+  ++++A  
Sbjct: 294 KPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVA 353

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
               +K   + P +  Y  L+      G    A ++ E+++ +G
Sbjct: 354 LLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKG 397



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 105/232 (45%)

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +++ A+ ++  +L++  +  +  +   +G+  +         L ++ME  G+KP     
Sbjct: 66  NDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNC 125

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+LI    +   I  + S   +++     P+   F  +I+ LC  G   QA       + 
Sbjct: 126 NILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA 185

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            GF  N+I+Y  LI G  K GE +  L L   ++ K + P +  Y+++I  +C+   + +
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A   +  M S  + P V  Y +L+      G    A+ L  +M+SE +KP  
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDV 297


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 171/361 (47%), Gaps = 29/361 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E RG   +L++ N LI+   +       + +   +L+    PN  T+ TLI  LC  G 
Sbjct: 88  MEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNG- 146

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                    +IH K C    IV            ++++ + L  +M+ +N+  D   +++
Sbjct: 147 ---------KIHDKHC----IVG-----------KLKDAVDLFNKMILENINPDVYTFTI 182

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +V    K   ++ A  V   M+ +G       Y + +  Y    ++ +A  +   M   G
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P  +++++LI G  K K ++E++   ++M  ++++P+   ++ +I  LC+ G    A 
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYAL 302

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            ++    D+G  PN +TYS ++    K  ++   + L  +M+ + I P +  YT LI  L
Sbjct: 303 KLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362

Query: 314 CQCGKLEEADKYFK--IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           CQ GKLE+A K F+  ++K H+L   V  Y  ++    +KG   +AL L  +M   G  P
Sbjct: 363 CQSGKLEDARKVFEDLLVKGHNL--NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIP 420

Query: 372 S 372
           +
Sbjct: 421 N 421



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 133/278 (47%), Gaps = 10/278 (3%)

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
               +++ + L  R+L++N     I ++ I+ + VK ++  + L + ++M  RG   N  
Sbjct: 39  NNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV 98

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG-CAKAK---------RI 214
                I ++C+ G I  A  ++ ++   G KP   T N LI+G C   K         ++
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           ++++    +M+   + P    F  ++   C+ G  K+A  +L + + +G  P  +TY+ L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           + GY    ++ +   ++  M    +SP + +Y+ LI+  C+   ++EA +  K M    +
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +P V  Y SL+    + G  + AL L +EM   G  P+
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPN 316



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 145/305 (47%), Gaps = 10/305 (3%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V + +R+  +  +P  I    ++  +++ +     + L ++M  + +  + +  ++++ +
Sbjct: 47  VSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINS 106

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA----- 192
             ++ ++ SA  V  ++LK G+  N+    T I   C  GKI + +C++ ++++A     
Sbjct: 107 FCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFN 166

Query: 193 -----GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
                 + P   TF +L++G  K  R++E+ +    MM + + P    +N ++       
Sbjct: 167 KMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVK 226

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
              +A  +       G SP+  +YS LI G+ K   + E ++L  EM +K I P +  Y+
Sbjct: 227 QVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYS 286

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           SLI  LC+ GK+  A K    M      P +  Y S++    +      A+ L  +M ++
Sbjct: 287 SLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ 346

Query: 368 GLKPS 372
           G++P+
Sbjct: 347 GIQPN 351



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 156/357 (43%), Gaps = 47/357 (13%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-----------NDLVWRIYQHMLENIRY 55
           AF V   + + G+  + I+ NTLI  +  + +            D V    + +LENI  
Sbjct: 116 AFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENIN- 174

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL-----ILRIIQEER-- 108
           P+  T   L+   CK G+++   ++L  +  +   P V+   SL     +++ + + +  
Sbjct: 175 PDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSI 234

Query: 109 ----------------------------IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
                                       ++E M LLK M  K +I + + YS ++    K
Sbjct: 235 FNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCK 294

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              +  AL + +EM  RG   N   Y++ + A C+  +++ A  L+ +M+N G++P   T
Sbjct: 295 SGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYT 354

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           + +LI+G  ++ ++E++    E ++ +    +   +  MI+  C+ G   +A  +L+   
Sbjct: 355 YTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKME 414

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           D G  PN  TY  +I    K+ E +   KL  EM   +    +     LI+S+   G
Sbjct: 415 DNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 114/236 (48%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + Q G S  + S++ LI+   K    D    + + M      PN  T  +LI  LCK G+
Sbjct: 238 MAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGK 297

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + ++D +H +   P ++  +S++  + +  +++  + LL +M  + +  +   Y++
Sbjct: 298 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTI 357

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    +   LE A  V+E++L +G + N + YT  I  +C+ G  +EA  L+ +ME+ G
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG 417

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
             P  +T+ ++I    K    E +     +M+        +  N++I  +   G++
Sbjct: 418 CIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSS 473


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 174/386 (45%), Gaps = 13/386 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++ + + ++     ++++N LI+ + K  + +     +  M +    P+ AT  T+I+
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFNTMIN 444

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK G L   + +L+ +      P  I    L+ R+     IE+ M LL  ML      
Sbjct: 445 AYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHP 504

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               +  ++ A  K R  +  L  +++++  G   +   Y T I  +C  G I  A  + 
Sbjct: 505 TPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVF 564

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   G+     T+N LI G   +  ++++ +   QM++  + P+   +N ++  L   
Sbjct: 565 KDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAA 624

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              K+A G++    ++G  PN  TY  L+ G+ K G ++E +KLY EM  K   P    Y
Sbjct: 625 RLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTY 684

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV------------GIHLEKGNK 354
             LIS   +  K+ +A +  + M+   + P    Y+ L+               L++  +
Sbjct: 685 NVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQ 744

Query: 355 AKALHLCEEMVSEGLKPSTSYLCSAS 380
           A+A  L EEM  +G  P  + L   S
Sbjct: 745 AEAKRLFEEMNEKGFIPCENTLACIS 770



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 174/406 (42%), Gaps = 36/406 (8%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A DV R + QR    ++  + TLI    K+D+  +   +++ M       N   I 
Sbjct: 277 LLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVID 336

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           + ++ L + G+++   ++   +  +   P  +  TS++    +  +  +   + + M  K
Sbjct: 337 SFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEK 396

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           +   D +AY++++    K+   ES    +  M + G + +S  + T I AYC+ G +  A
Sbjct: 397 SSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNA 455

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS---------- 232
             L+ EM++ GLKP   T N+L++    A  IE+++     M+     P+          
Sbjct: 456 LKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDA 515

Query: 233 -------------------------CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
                                     S +N +I   C  G  ++A  +    + KG   +
Sbjct: 516 SSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILAD 575

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            ITY+ LI GY     +++   ++ +M  + +SP +  Y  L+  L     ++EA     
Sbjct: 576 IITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVN 635

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            MK   LVP    Y+ LV  H + GN  + + L  EM+++G  P T
Sbjct: 636 QMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKT 681



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 166/357 (46%), Gaps = 7/357 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG    ++ +  L+  + K+   +    ++Q +LE    PN  T   LI   CK G +  
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L  +  K   P VIV +S++    ++  + E M ++++M+++N++ +   Y  ++ 
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K      AL +++EM  RG   N+FV  +F+      G++EEA+ L ++M + GL P
Sbjct: 306 GYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN--- 253
               +  +++G  KA +  ++ +  ++M  +       A+N +I  L + G  +  +   
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT 425

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
           GM  L    G +P+  T++ +I  Y KEG +   LKL  EM+   + P       L+  L
Sbjct: 426 GMRQL----GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           C  G++E+       M      P    +++++    +       LH  +++V  G+K
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVK 538



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 35/381 (9%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           S+  FN LI    ++        + + M      P+  T  TL++  CK G L T   ++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             I      P VI  T+LI    + + +E+ + +   M  K+++ D + Y+ I+    K 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +E A  V+ EM + G   N F Y T I +  + G + EA  L   M   G+      +
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             L++G  KA     +    + ++   L+P+C  ++ +I   C+ G+  +   +L    +
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI----------- 310
           K   PN I YS ++ GY K+G + E + +  +M  ++I P +  Y +LI           
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 311 ------------------------SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
                                   ++L + G++EEAD+ FK M S  L+P    Y S++ 
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMD 375

Query: 347 IHLEKGNKAKALHLCEEMVSE 367
              + G ++ A ++ +EM  +
Sbjct: 376 GFFKAGKESDAFNIAQEMTEK 396



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 35/297 (11%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I   + LL+ M  +    D + Y+ ++    K+ +L +A  +  E+       N   YTT
Sbjct: 33  ISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTT 92

Query: 169 FIGAY-----------------------------------CEYGKIEEANCLMQEMENAG 193
            I AY                                   C+ GK+EEA  + +EME  G
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   ++  LI+   K   + E+     +M+ R +      +  ++  L + G A  A 
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M  + L++   PN +TYS LI G+ K G++ +   L  EME K I P +  Y+S++   
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            + G L EA    + M   +++P V +Y +L+  + +   +  AL L +EM S GL+
Sbjct: 273 TKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 116/242 (47%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +++++    +   +  A+ + E M   G + +   Y T +  +C+ G +  A  LM E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
              L+P   T+  LI+   K++ +E++L   ++M  + L+P    +  ++  LC+ G  +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +A  +     + G  PN  +Y+ LI    KEG + E   L   M  + I   +  YT+L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             L + G    A+  F+++   SLVP    Y +L+  H + G+  K   L +EM  + + 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 371 PS 372
           P+
Sbjct: 260 PN 261


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 166/365 (45%), Gaps = 8/365 (2%)

Query: 15  EQRGFSLSL----ISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALC 69
           E  G S+S+    + +NTLI  + K  R      + + M       P+  T   LI   C
Sbjct: 371 ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC 430

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G+++   ++ D ++ +  +P V+   +L+  + +  R+   +       R+ M  D +
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            Y+ ++ A   + N E A+ ++ EMLK G S ++ VY T I  + + G++ +A+ ++ E+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
           +  G++P    +N LI G  +  +        ++M    L P    +N +I    + G+ 
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTS 308
           K A  ++   +  G  P   TY  +I  Y   G   E ++++ +M+  S + P    Y  
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNI 670

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSE 367
           LI+SLC+  K++ A    + MK   + P    Y ++  G+  EK +  K     + M+  
Sbjct: 671 LINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEK-DLEKVFEFMDRMIEH 729

Query: 368 GLKPS 372
              P 
Sbjct: 730 ACNPD 734



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 154/322 (47%), Gaps = 4/322 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMV 114
           P+     TLI  LCK G+ Q  + +++R+  ++ C+P  I    LI    +   IE+G  
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           L   M ++ +  + +  + +V    +   + SA+  + E  +RG   ++  YT  I A+C
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
                E+A  L  EM  +G  P    +  LI G ++A R+ ++     ++    + P   
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +I   C      +   ML    + G  P+ ITY+ LI   +K G+++   K+  +M
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP-GVDIYESLVGIHLEKGN 353
               + PT+  Y ++I++ C  G   EA + FK MK+ S VP    IY  L+   L K N
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILIN-SLCKNN 679

Query: 354 KAK-ALHLCEEMVSEGLKPSTS 374
           K K A+ L E+M   G+ P+T+
Sbjct: 680 KVKSAVSLMEDMKIWGVTPNTT 701



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 172/379 (45%), Gaps = 9/379 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
            +D+   + + G  L   + N+L+  + +    + +  + + M+E    PN  T   LI+
Sbjct: 289 GWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILIN 348

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCS--------PMVIVNTSLILRIIQEERIEEGMVLLKR 118
            +CK  ++   +++L+++ G + S        P V++  +LI  + +  R +EG+ L++R
Sbjct: 349 HMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMER 408

Query: 119 ML-RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           M  +K    DTI Y+ ++    K   +E    +++EM K G + N     T +G  C  G
Sbjct: 409 MRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTG 468

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           ++  A     E +  G+K    T+  LI         E+++    +M+     P    + 
Sbjct: 469 RVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYY 528

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +I    + G    A+ +L      G  P+ + Y+ LIGG+ +  +   V ++  EME  
Sbjct: 529 TLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEA 588

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P    Y +LI+   + G L+ A K  + M    +VP V  Y +++  +   GN  +A
Sbjct: 589 GLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEA 648

Query: 358 LHLCEEMVSEGLKPSTSYL 376
           + + ++M +    P  + +
Sbjct: 649 MEIFKDMKAASKVPPNTVI 667



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/369 (22%), Positives = 163/369 (44%), Gaps = 25/369 (6%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLE-----NIRYPNEATIRTLISALCK---GGQLQTYV 78
           N  + ++ +S R     ++   M E     N R PN+AT   L S L K     +L +  
Sbjct: 194 NVWLSILLRSGRVKDALKVIDEMFESNDDSNCR-PNDATGDILFSFLLKRERNEELLSED 252

Query: 79  DMLDRI-----HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++++ +     HG   S   +    LI R+ +  +   G  L   M++   + ++ A + 
Sbjct: 253 EIVNLVLKFGEHGVLISSFWM--GRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNS 310

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM---- 189
           ++    +  N      + E+M++     N   +   I   C++ ++++A  ++++M    
Sbjct: 311 LLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGK 370

Query: 190 ENAGL----KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK-LLPSCSAFNEMIRRLC 244
           E+ G+    +P    +N LI+G  K  R +E L   E+M S+K   P    +N +I   C
Sbjct: 371 ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC 430

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  ++   +      +G +PN +T + L+GG  + G +   +  + E + + +     
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YT+LI++ C     E+A + F  M      P   +Y +L+    + G  A A  +  E+
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 365 VSEGLKPST 373
              G++P T
Sbjct: 551 KKLGIRPDT 559



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 138/350 (39%), Gaps = 36/350 (10%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R   Q+G +   I++N LI    K+   +    ++  M +    PN  T+ TL+  +C+ 
Sbjct: 408 RMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRT 467

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++ + V+       +      +  T+LI         E+ M L   ML+     D I Y
Sbjct: 468 GRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVY 527

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
             ++    +   +  A  V  E+ K G   ++  Y T IG +C   K      +++EME 
Sbjct: 528 YTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEE 587

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           AGLKP   T+N LI   +K   ++ +     +M+   ++P+ + +  +I   C  GN  +
Sbjct: 588 AGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNE 647

Query: 252 A-----------------------------NGMLTLALD-------KGFSPNEITYSHLI 275
           A                             N  +  A+         G +PN  TY+ + 
Sbjct: 648 AMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIF 707

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            G   E ++++V +    M   + +P       L   L   G++E   K+
Sbjct: 708 KGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKF 757



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 22/268 (8%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           A S ++ A  +   +E +L+++ ++       N+++   ++      G++++A  ++ EM
Sbjct: 159 AASFLLRASGRSELVEESLILFNDLDPS--VKNTYLRNVWLSILLRSGRVKDALKVIDEM 216

Query: 190 ----ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE------QMMSRKLLPSCSAFNEM 239
               +++  +P D T ++L     K +R EE LS  E      +     +L S      +
Sbjct: 217 FESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRL 276

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I RLC      +   + T  +  G        + L+ G A+EG    + +L  +M    I
Sbjct: 277 ITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDI 336

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMK--------SHSLVPGVDIYESLVGIHLEK 351
            P +  +  LI+ +C+  ++++A +  + M         S S+ P V IY +L+    + 
Sbjct: 337 QPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKV 396

Query: 352 GNKAKALHLCEEMVSE-GLKPST-SYLC 377
           G + + L L E M S+ G  P T +Y C
Sbjct: 397 GRQQEGLGLMERMRSQKGCAPDTITYNC 424


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 168/367 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + + QRG    L+++N+++H + K+   D      + M+     PN  T   LI 
Sbjct: 241 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 300

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                GQ +  V +   +      P V+  + L+  + +  +I+E   +   M  K    
Sbjct: 301 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 360

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  +Y++++        L     +++ ML  G + + + +   I AY   G +++A  + 
Sbjct: 361 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 420

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+KP   T+  +I    +  ++++++    QM+ + + P   A+N +I+  C  
Sbjct: 421 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 480

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  +++  ++ G   + + +S +I    K G + +   ++       + P    Y
Sbjct: 481 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVY 540

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+   C  GK+E+A + F  M S  + P V  Y +LV  + + G   + L L  EM+ 
Sbjct: 541 NMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQ 600

Query: 367 EGLKPST 373
            G+KPST
Sbjct: 601 RGIKPST 607



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/369 (22%), Positives = 173/369 (46%), Gaps = 2/369 (0%)

Query: 7   AFDVCRYLEQRGF--SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           A D+ R + + G   S +++++NT+I    K    +    +++ M++    P+  T  ++
Sbjct: 204 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 263

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + ALCK   +      L ++  KR  P      +LI       + +E + + K M R ++
Sbjct: 264 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 323

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D +  S+++ +  K   ++ A  V++ M  +G + + F Y   +  Y   G + +   
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   M   G+ P   TFN+LI+  A    +++++    +M    + P    +  +I  LC
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A       +D+G +P++  Y+ LI G+   G + +  +L  E+    +   + 
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 503

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            ++S+I++LC+ G++ +A   F +  +  L P   +Y  L+  +   G   KAL + + M
Sbjct: 504 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 563

Query: 365 VSEGLKPST 373
           VS G++P+ 
Sbjct: 564 VSAGIEPNV 572



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 161/359 (44%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +    +FN LI         D    I+  M ++   P+  T RT+I+ALC+ G++   
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           ++  +++  +  +P       LI        + +   L+  ++   M  D + +S I+  
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 511

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  +  A  +++  +  G   ++ VY   +  YC  GK+E+A  +   M +AG++P 
Sbjct: 512 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 571

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +  L+ G  K  RI+E LS   +M+ R + PS   ++ +I  L E G    A     
Sbjct: 572 VVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFH 631

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + G + +  TY+ ++ G  K     E + L+ E+   ++   +    ++I  + Q  
Sbjct: 632 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 691

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++EEA   F  +    LVP V  Y  ++   +++G   +A  +   M + G +P++  L
Sbjct: 692 RVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 750



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/344 (19%), Positives = 150/344 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   G    ++++ T+I  + +  + D     +  M++    P++     LI   C  G 
Sbjct: 423 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 482

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    +++  I        ++  +S+I  + +  R+ +   +    +   +  D + Y++
Sbjct: 483 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 542

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     +  +E AL V++ M+  G   N   Y T +  YC+ G+I+E   L +EM   G
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG 602

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +KP    ++++I+G  +A R   +     +M    +      +N ++R L +     +A 
Sbjct: 603 IKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 662

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +           N IT + +I G  +   ++E   L+  +    + P++  Y+ +I++L
Sbjct: 663 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 722

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + G +EEA+  F  M++    P   +   +V   L+K    +A
Sbjct: 723 IKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 3/223 (1%)

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           R  S  S  Y   +       + E A     ++   GL+      N L+EG  +AKR +E
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167

Query: 217 SLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF--SPNEITYSH 273
           +L     +      +P   +++ +++ LC+ G + QA+ +L +  + G   SPN + Y+ 
Sbjct: 168 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           +I G+ KEG++ +   L+ EM  + I P L  Y S++ +LC+   +++A+ + + M +  
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++P    Y +L+  +   G   +A+ + +EM    + P    L
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 330



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/264 (19%), Positives = 115/264 (43%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           ++I+ LCK G++    ++ D        P  +V   L+       ++E+ + +   M+  
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  + + Y  +V    K+  ++  L ++ EML+RG   ++ +Y+  I    E G+   A
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
                EM  +G+     T+N+++ G  K +  +E++   +++ +  +  +    N MI  
Sbjct: 627 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           + +    ++A  +          P+ +TYS +I    KEG ++E   ++  M+     P 
Sbjct: 687 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746

Query: 303 LPAYTSLISSLCQCGKLEEADKYF 326
                 ++  L +  ++  A  Y 
Sbjct: 747 SRLLNHVVRELLKKNEIVRAGAYL 770


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 173/374 (46%), Gaps = 1/374 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M L E+A ++   + QRG S   +SF  ++       R     R    M+E     + AT
Sbjct: 202 MGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNAT 261

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I A C+ G +   V    ++     +P VI  T+LI  + ++  I++   LL+ M+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKI 179
           R+    +   ++ ++    K    E A  ++ ++++  G+  N   YT  I  YC+  K+
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
             A  L+  M+  GL P   T+  LI+G  K      +    + M      P+   +N +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+ G+  +A  +L      G   + +TY+ L+  + ++ +    L  + +M     
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P + +YT+LIS+ C+  +++E+++ F+   S  L+P    Y S++  +   GN + A+ 
Sbjct: 502 TPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 360 LCEEMVSEGLKPST 373
           L + M + G  P +
Sbjct: 562 LFQRMSNHGCAPDS 575



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 1/320 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ-T 76
           G + ++I+F  LI+ + K       + + + M+     PN  T  TLI  LCK G  +  
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
           +   L  +      P V   T++I    +E+++    +LL RM  + ++ +T  Y+ ++ 
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K+ N   A  + + M K GFS N + Y   I   C+ G ++EA  L+ ++   GL+ 
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQA 468

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +L+    +      SL +  +M+     P   ++  +I   C     K++  + 
Sbjct: 469 DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLF 528

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
             A+  G  P + TY+ +I GY + G     +KL+  M     +P    Y +LIS LC+ 
Sbjct: 529 EEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKE 588

Query: 317 GKLEEADKYFKIMKSHSLVP 336
            KL++A   +  M    L P
Sbjct: 589 SKLDDARNLYDAMMDKGLSP 608



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 159/357 (44%), Gaps = 1/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF +   +   +I    +    + V   +  M+E    PN      LI+ LCK G ++
Sbjct: 252 ERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIK 311

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AYSLI 134
              ++L+ +  +   P V  +T+LI  + ++   E+   L  +++R +     +  Y+ +
Sbjct: 312 QAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAM 371

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K   L  A ++   M ++G   N+  YTT I  +C+ G    A  LM  M   G 
Sbjct: 372 INGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF 431

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+N +I+G  K   ++E+     ++    L      +  ++   C   +  ++  
Sbjct: 432 SPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLV 491

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                L  GF+P+  +Y+ LI  + ++ +++E  +L+ E     + PT   YTS+I   C
Sbjct: 492 FFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYC 551

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           + G    A K F+ M +H   P    Y +L+    ++     A +L + M+ +GL P
Sbjct: 552 RYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 133/275 (48%), Gaps = 1/275 (0%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           +++   +  +++E + ++  M  + ++  T   + ++   V M  +E A  ++ EM +RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            S +   +   + A C  G++ EA   +  M   G    + T  L+I+   +   +   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            Y  +M+   L P+   F  +I  LC+ G+ KQA  +L   + +G+ PN  T++ LI G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 279 AKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            K+G  ++  +L+ ++       P +  YT++I+  C+  KL  A+     M+   LVP 
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + Y +L+  H + GN  +A  L + M  EG  P+
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 145/331 (43%), Gaps = 3/331 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T+  ++      G ++   +M   +  +  SP  +    +++      R+ E    
Sbjct: 187 PSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERW 246

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M+ +  I D    +LI+ A  +   +   +  + +M++ G + N   +T  I   C+
Sbjct: 247 LNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCK 306

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS-YCEQMMSRKLLPSCS 234
            G I++A  L++EM   G KP   T   LI+G  K    E++   + + + S    P+  
Sbjct: 307 QGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVH 366

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +  MI   C+     +A  +L+   ++G  PN  TY+ LI G+ K G      +L   M
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             +  SP +  Y ++I  LC+ G L+EA +    +  H L      Y  L+ +H  + + 
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 355 AKALHLCEEMVSEGLKPST-SYLCSAST-CR 383
            ++L    +M+  G  P   SY    ST CR
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISTFCR 517



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 144/315 (45%), Gaps = 3/315 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + +   G+  ++ ++  +I+   K D+ +    +   M E    PN  T  TLI   CK 
Sbjct: 354 KLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKV 413

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G      +++D +  +  SP +    ++I  + ++  ++E   LL ++    +  D + Y
Sbjct: 414 GNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTY 473

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++    +  +   +LV + +MLK GF+ +   YTT I  +C   +++E+  L +E  +
Sbjct: 474 TILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVS 533

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL P  +T+  +I G  +      ++   ++M +    P    +  +I  LC+      
Sbjct: 534 LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDD 593

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    +DKG SP E+T   L   Y K+ +    + +   +E +    T+    +L+ 
Sbjct: 594 ARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVR 650

Query: 312 SLCQCGKLEEADKYF 326
            LC  GKL+ A  +F
Sbjct: 651 KLCSEGKLDMAALFF 665



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 52/265 (19%), Positives = 101/265 (38%), Gaps = 40/265 (15%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   +   G     +++  L+ V  +    +     +  ML+    P+  +  TLIS
Sbjct: 454 AYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIS 513

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+  Q++                             + ER+ E  V L       +I 
Sbjct: 514 TFCRQKQMK-----------------------------ESERLFEEAVSL------GLIP 538

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ ++    +  N   A+ +++ M   G + +S  Y   I   C+  K+++A  L 
Sbjct: 539 TKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLY 598

Query: 187 QEMENAGLKPYDET-FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             M + GL P + T   L  E C K      +++  +++  R+ + +    N ++R+LC 
Sbjct: 599 DAMMDKGLSPCEVTRLTLAYEYCKKDDS-STAINVLDRLEKRQWIRT---VNTLVRKLCS 654

Query: 246 CGNAKQANGMLTLALDKGFSPNEIT 270
            G    A       LDK  + N +T
Sbjct: 655 EGKLDMAALFFHKLLDKEPNVNRVT 679


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 165/359 (45%), Gaps = 1/359 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF   +   Q G + +LI+F++LI+ + K       + + + M+     PN  T   LI 
Sbjct: 282 AFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341

Query: 67  ALCKGGQLQ-TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            LCK G  +  +   L  +      P V   T +I    +EE++    +LL RM  + ++
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLV 401

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +T  Y+ ++    K  N   A  + + M K GF+ N F Y   I   C+ G+  EA  L
Sbjct: 402 PNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKL 461

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           ++    +GL     T+ +LI    +    +++L+   +M    L P    +N +I   C 
Sbjct: 462 LRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCR 521

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
               +++  +   A+  G  P + TY+ +I GY ++G I   +K +++M      P    
Sbjct: 522 QKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSIT 581

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           Y +LIS LC   KL+EA + ++ M  + L P      +L   + ++G+ A A+ + E +
Sbjct: 582 YGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERL 640



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 165/367 (44%), Gaps = 4/367 (1%)

Query: 9   DVCRYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           DV R+L+   +RG+++   +   +I   ++    +  +  ++  ++    PN     +LI
Sbjct: 246 DVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLI 305

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNM 124
           + LCK G ++   +ML+ +  K   P V  +T+LI  + ++   E+   L  +++R  N 
Sbjct: 306 NGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNY 365

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             +   Y+ ++    K   L  A ++   M ++G   N+  YT  I  +C+ G    A  
Sbjct: 366 KPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYE 425

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           LM  M   G  P   T+N +I+G  K  R  E+     + +   L      +  +I   C
Sbjct: 426 LMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFC 485

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              + KQA  + +     G  P+  TY+ LI  + ++ +++E  KL+ E     + PT  
Sbjct: 486 RQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKE 545

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            YTS+I   C+ G +  A K+F  M+ +   P    Y +L+     +    +A  L E M
Sbjct: 546 TYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETM 605

Query: 365 VSEGLKP 371
           +  GL P
Sbjct: 606 IDNGLSP 612



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 14/268 (5%)

Query: 107 ERIEEGMVLLKRMLRKNMIHDT-IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
           E    G+VL  R+L  N + D  +A   + YA+           V++EML R    +S  
Sbjct: 183 EMQNHGLVLKARIL--NFVIDVALALGFVDYAEK----------VFDEMLDRAVVPDSTS 230

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y   +  YC  G+I + +  +++M   G    + T  L+I   ++   +  +  Y ++ +
Sbjct: 231 YKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWV 290

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              L P+   F+ +I  LC+ G+ KQA  ML   + KG+ PN  T++ LI G  K+G  +
Sbjct: 291 QMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTE 350

Query: 286 EVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           +  +L+ ++    +  P +  YT +I+  C+  KL  A+     MK   LVP  + Y  L
Sbjct: 351 KAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCL 410

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  H + GN  +A  L + M  EG  P+
Sbjct: 411 IDGHCKAGNFGRAYELMDLMGKEGFTPN 438



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 3/271 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LI   CK G      +++D +  +  +P +    ++I  + ++ R  E   L
Sbjct: 402 PNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKL 461

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L+R L+  +  D + Y++++    +  + + AL ++  M K G   +   Y   I  +C 
Sbjct: 462 LRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCR 521

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K+EE+  L +E    GL P  ET+  +I G  +   I  ++ +  +M      P    
Sbjct: 522 QKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSIT 581

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  +I  LC      +A  +    +D G SP E+T   L   Y K+G+    + +   +E
Sbjct: 582 YGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLE 641

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
            K    T+    +LI  LC   K+  A  +F
Sbjct: 642 KKLWIRTV---NTLIRKLCSEKKVGVAALFF 669



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 6/238 (2%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ +  EM   G    + +    I      G ++ A  +  EM +  + P   ++ L
Sbjct: 174 LKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKL 233

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++ G  +  RI +   + + M+ R      +    MI    E G   +A       +  G
Sbjct: 234 MVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMG 293

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +PN I +S LI G  K G I++  ++  EM  K   P +  +T+LI  LC+ G  E+A 
Sbjct: 294 LNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAF 353

Query: 324 KYF-KIMKSHSLVPGVDIYESLVGIHL--EKGNKAKALHLCEEMVSEGLKPST-SYLC 377
           + F K+++S +  P V  Y  ++  +   EK N+A+ L +   M  +GL P+T +Y C
Sbjct: 354 RLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLI--RMKEQGLVPNTNTYTC 409



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 105/210 (50%), Gaps = 2/210 (0%)

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           + ++ E GK++EA  ++ EM+N GL       N +I+       ++ +    ++M+ R +
Sbjct: 165 VRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAV 224

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           +P  +++  M+   C  G     +  L   +++G++ +  T + +I  ++++G +     
Sbjct: 225 VPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFW 284

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
            + +     ++P L  ++SLI+ LC+ G +++A +  + M      P V  + +L+    
Sbjct: 285 YFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLC 344

Query: 350 EKGNKAKALHLCEEMV-SEGLKPST-SYLC 377
           +KG   KA  L  ++V S+  KP+  +Y C
Sbjct: 345 KKGWTEKAFRLFLKLVRSDNYKPNVYTYTC 374



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/278 (20%), Positives = 116/278 (41%), Gaps = 25/278 (8%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F  A+++   + + GF+ ++ ++N +I  + K  R    +++ +  L++  + ++ T   
Sbjct: 420 FGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTI 479

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LIS  C+    +  + +  R+      P +     LI    +++++EE   L +  +   
Sbjct: 480 LISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLG 539

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++     Y+ ++    +  ++ SA+  + +M   G   +S  Y   I   C   K++EA 
Sbjct: 540 LLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEAC 599

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ-----------MMSRKLLPS 232
            L + M + GL P + T            R+  +  YC+Q            + +KL   
Sbjct: 600 QLYETMIDNGLSPCEVT------------RVTLAYEYCKQGDSATAMIILERLEKKLW-- 645

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
               N +IR+LC       A       LDK  + + IT
Sbjct: 646 IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 82/189 (43%)

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           C    + N  L    E    ++   ++  +++E+++   +M +  L+      N +I   
Sbjct: 144 CATTFLNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVA 203

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
              G    A  +    LD+   P+  +Y  ++ GY + G I +V +   +M  +  +   
Sbjct: 204 LALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDN 263

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
              T +IS+  + G +  A  YFK      L P +  + SL+    + G+  +A  + EE
Sbjct: 264 ATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEE 323

Query: 364 MVSEGLKPS 372
           MV +G KP+
Sbjct: 324 MVRKGWKPN 332


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 160/352 (45%), Gaps = 35/352 (9%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T  T+++  CK G+ +   D++DR+  K     V     LI  + +  R  +G +L
Sbjct: 8   PTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLL 67

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           LK+M ++ +  +   Y+ ++   +K R +  A  V+ EML    S N   Y   I  +C+
Sbjct: 68  LKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCD 127

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G  E+A  L+  ME  GL+P +  +  L+ G +K  + + + S  E++    ++    A
Sbjct: 128 CGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRA 187

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  MI  LC+ G   ++  +L +    G SP+ IT+S LI G+ K G+I+   ++  +M 
Sbjct: 188 YTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMF 247

Query: 296 YKSISPTLPAYTS-----------------------------------LISSLCQCGKLE 320
              ++P    Y +                                   LISSLC+ G++ 
Sbjct: 248 KAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVA 307

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA+ + + M +  L P    ++ ++  +   G+  KA  + +EM+  G  PS
Sbjct: 308 EAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPS 359



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 167/375 (44%), Gaps = 9/375 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA---- 59
           FE A  +   +E +G     +++  L+  ++K  + D    I + ++E IR         
Sbjct: 131 FEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFD----IAKSLMERIRMSGMVVGYR 186

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +I  LCK G L   + +LD +     SP +I  + LI    +  +I+    ++ +M
Sbjct: 187 AYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKM 246

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            +  +  + + Y+ ++Y   K  ++  A   Y  M + G   + F+    I + C  G++
Sbjct: 247 FKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRV 306

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            EA   M+ M    L P   TF+ +I G        ++ S  ++M+     PS   +  +
Sbjct: 307 AEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSL 366

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           ++ LC+ GN ++A  +L        + +   Y+ ++    K G++ + + L+ EM   ++
Sbjct: 367 LKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNV 426

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
            P    Y  +++ L + GK+  A  +F K +   +L P   +Y SL     + G    A 
Sbjct: 427 LPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAAS 486

Query: 359 HLCEEMVSEGLKPST 373
           ++ EEM  +G+ P T
Sbjct: 487 YIYEEMEHKGINPDT 501



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 159/364 (43%), Gaps = 4/364 (1%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + + +R  + +  ++NTLI+ + K  +     R++  ML     PN  T   LI   C  
Sbjct: 69  KKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDC 128

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G  +  + +LD +  K   P  +   +L+  + +  + +    L++R+    M+    AY
Sbjct: 129 GNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAY 188

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    K   L+ +L + + M K G S +   ++  I  +C+ GKI+ A  ++ +M  
Sbjct: 189 TAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFK 248

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           AGL P    +  LI    K   I E+      M            N +I  LC  G   +
Sbjct: 249 AGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAE 308

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A   +        +PN IT+  +I GY   G+  +   ++ EM      P+   Y SL+ 
Sbjct: 309 AEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLK 368

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVD--IYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            LC+ G L EA K   + K H +   VD  IY +++    ++G  + A+ L  EMV   +
Sbjct: 369 GLCKGGNLREAKKL--LYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNV 426

Query: 370 KPST 373
            P +
Sbjct: 427 LPDS 430



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 163/375 (43%), Gaps = 9/375 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L + +  +   + + G S  +I+F+ LI+   K+ +      +   M +    PN     
Sbjct: 200 LLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYA 259

Query: 63  TLISALCKGGQL----QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           TLI   CK G +    + Y  M    H        I N  LI  + +  R+ E    ++ 
Sbjct: 260 TLIYNSCKKGDITEAFRNYATMTRTGHD---VDYFICNV-LISSLCRAGRVAEAEDFMRH 315

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M   ++  ++I +  I+     + +   A  +++EM+K G   + F Y + +   C+ G 
Sbjct: 316 MSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGN 375

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           + EA  L+ ++ +         +N ++    K  ++ ++++   +M+   +LP    +  
Sbjct: 376 LREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAI 435

Query: 239 MIRRLCECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
           ++  L   G    A      AL +G  SPN++ Y+ L  G  K G+      +Y EME+K
Sbjct: 436 ILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHK 495

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            I+P   A  +++    + GK+E+ +K F  M+S SL P +  Y  L+  + +K +  K 
Sbjct: 496 GINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKC 555

Query: 358 LHLCEEMVSEGLKPS 372
                 M   G+ P 
Sbjct: 556 SKFYNIMTRMGISPD 570



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 157/348 (45%), Gaps = 18/348 (5%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLV--WRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++    + SL ++N L+H  +K  + DL+   + Y  M      P++ T  ++I  LCK 
Sbjct: 527 MQSGSLTPSLATYNILLHGYSK--KKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKS 584

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L     ML ++  +      +    LI    + +++ +   LL       +I D   Y
Sbjct: 585 GMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTY 644

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + I     +   L  + ++  +ML+RG +  S  Y + I   C  G I+ A  L  EME 
Sbjct: 645 NAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEA 704

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+  +D   + ++ G A+  ++EE++   + M+ ++L+P+ + F  ++  LC+     +
Sbjct: 705 IGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSE 764

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +       G   + + Y+ LI G   +G+      LY EM+ + + P    Y +LI 
Sbjct: 765 ALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLID 824

Query: 312 SLCQC-GKLEEADKYFKIMKSHSLVPGVDIYESLVGI--HLEKGNKAK 356
           ++    G++EE            L+  ++ +E LVGI  H   G K K
Sbjct: 825 AISTNEGEVEE-----------RLLVYLEQFEKLVGILKHRMVGTKLK 861



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/368 (21%), Positives = 159/368 (43%), Gaps = 41/368 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E +G +   I+ N ++   ++  + + V +++  M      P+ AT   L+    K   
Sbjct: 492 MEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKD 551

Query: 74  L---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
           L     + +++ R+     SP  +   S+IL + +   ++ G  +LK+M+ ++ + D + 
Sbjct: 552 LLKCSKFYNIMTRMG---ISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLT 608

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
            ++++                          NS          CE  K+ +A  L+    
Sbjct: 609 LNMLI-------------------------TNS----------CETDKMGKAFDLLNIKN 633

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
             G+ P   T+N +  G  +A  + ES      M+ R + P+ + +  +I  +C  G+ +
Sbjct: 634 LLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQ 693

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +       G S  ++  S ++ G A+ G+++E + +   M  K + PT+  +T+L+
Sbjct: 694 GAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLM 753

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             LC+  KL EA K    M  + +   V  Y  L+      G+   A +L EEM   GL 
Sbjct: 754 HMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLW 813

Query: 371 PSTSYLCS 378
           P+T+  C+
Sbjct: 814 PNTTTYCT 821



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 142/318 (44%), Gaps = 6/318 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEG 112
           PN+    +L   L K GQ      + + +  K  +P  I   +++    R+ + E++E+ 
Sbjct: 464 PNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEK- 522

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
             L  +M   ++      Y+++++   K ++L      Y  M + G S +     + I  
Sbjct: 523 --LFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILG 580

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+ G ++    ++++M          T N+LI    +  ++ ++           ++P 
Sbjct: 581 LCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPD 640

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
            + +N +   L      ++++ +L   L++G +P    Y  LI G  + G+IQ   +L  
Sbjct: 641 VNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKD 700

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EME   +S    A ++++  L QCGK+EEA      M    L+P V  + +L+ +  +K 
Sbjct: 701 EMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKA 760

Query: 353 NKAKALHLCEEMVSEGLK 370
             ++AL L  +M   G+K
Sbjct: 761 KLSEALKLRGKMALYGVK 778



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 8/219 (3%)

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G+      Y T +   C+ G+ + A+ L+  ME+ G++    T+N+LI+   K  R  + 
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCE----CGNAKQANGMLTLALDKGFSPNEITYSH 273
               ++M  R + P+   +N +I  L +     G  +  N ML L L    SPN +TY+ 
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNL----SPNRVTYNI 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           LI G+   G  ++ L+L   ME K + P    Y +L+S L +  K + A    + ++   
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +V G   Y +++    + G   ++L L + M  +G  P 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPD 219



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 2/219 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AFD+       G    + ++N +   + ++        +   MLE    P      +LI+
Sbjct: 625 AFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLIN 684

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +C+ G +Q    + D +     S   +  ++++  + Q  ++EE M++L  ML+K +I 
Sbjct: 685 GMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIP 744

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               ++ +++   K   L  AL +  +M   G   +   Y   I   C  G    A  L 
Sbjct: 745 TVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLY 804

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAK-RIEES-LSYCEQ 223
           +EM+  GL P   T+  LI+  +  +  +EE  L Y EQ
Sbjct: 805 EEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVYLEQ 843


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 182/370 (49%), Gaps = 1/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ A+ +    + +G   S+I++N ++  + K  R +   RI++ M  +   PN  T   
Sbjct: 106 FDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNI 164

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC+ G+L   +++ D +      P V+    +I R+ + +++EE   + + M  K 
Sbjct: 165 LIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV 224

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + +S ++    K   ++ A  +YE+ML  G    + VYT+ I ++ + G+ E+ +
Sbjct: 225 CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGH 284

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            + +EM + G  P     N  ++   KA   E+  +   ++ +   +P   +++ +I  L
Sbjct: 285 KIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGL 344

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G A +   +     ++G   +   Y+ +I G+ K G++ +  +L  EM+ K   PT+
Sbjct: 345 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 404

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y S+I  L +  +L+EA   F+  KS+ +   V +Y SL+    + G   +A  + EE
Sbjct: 405 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464

Query: 364 MVSEGLKPST 373
           ++ +GL P+ 
Sbjct: 465 LMQKGLTPNV 474



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 1/278 (0%)

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
           LCK  +L   V++ +++   R  P      ++I+      + +E   LL+R   K  I  
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
            IAY+ I+    K R +E AL ++EEM KR    N   Y   I   C  GK+  A  +  
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           +ME AGL P   T N++I+   KA+++EE+ S  E M  +   P+   F+ +I  L +CG
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               A  +    LD G  P  I Y+ LI  + K G  ++  K+Y EM +   SP L    
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + +  + + G+ E+    F+ + +H  +P    Y  L+
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 341



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 168/382 (43%), Gaps = 11/382 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLI----------HVVTKSDRNDLVWRIYQHMLE 51
           R    AFD+ + + +  F  +  ++  LI           V+ K++R D    +++ + +
Sbjct: 24  RKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQ 83

Query: 52  NIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE 111
           N + P      T+I      G+      +L+R   K   P VI    ++  + ++ R+EE
Sbjct: 84  NRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEE 143

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
            + + + M +++ + +   Y++++    +   L +AL + ++M + G   N       I 
Sbjct: 144 ALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID 202

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
             C+  K+EEA  + + M++    P   TF+ LI+G  K  R++++ S  E+M+    +P
Sbjct: 203 RLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 262

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
               +  +IR   +CG  +  + +    +  G SP+    +  +    K GE ++   L+
Sbjct: 263 GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALF 322

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            E+      P   +Y+ LI  L + G   E  + F  MK    V     Y +++    + 
Sbjct: 323 REINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKS 382

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           G   KA  L EEM  +G  P+ 
Sbjct: 383 GKVNKAYQLLEEMKVKGHPPTV 404



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 164/352 (46%), Gaps = 2/352 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++F++LI  + K  R D  + +Y+ ML+    P      +LI +  K G+ +    +   
Sbjct: 230 VTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 289

Query: 84  IHGKRCSP-MVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           +    CSP + ++NT +   + +    E+G  L + +     I D  +YS++++  VK  
Sbjct: 290 MVHTGCSPDLTLINTYMDC-VFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 348

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
                  ++  M ++G   ++  Y   I  +C+ GK+ +A  L++EM+  G  P   T+ 
Sbjct: 349 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYG 408

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +I+G AK  R++E+    E+  S  +  +   ++ +I    + G   +A  ++   + K
Sbjct: 409 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 468

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G +PN  T++ L+    K  EI E L  +  M+     P    Y+ LI+ LC+  K  +A
Sbjct: 469 GLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKA 528

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             +++ M+   L P    Y +++    + GN  +A  L     + G  P ++
Sbjct: 529 FVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSA 580



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 146/321 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N LI ++ +  + +    I   M     +PN  T+  +I  LCK  +L+    + + +
Sbjct: 161 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 220

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             K C+P  +  +SLI  + +  R+++   L ++ML    +   I Y+ ++ +  K    
Sbjct: 221 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRK 280

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E    +Y+EM+  G S +  +  T++    + G+ E+   L +E+   G  P   ++++L
Sbjct: 281 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 340

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  KA    E+      M  +  +    A+N +I   C+ G   +A  +L     KG 
Sbjct: 341 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 400

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  +TY  +I G AK   + E   L+ E +   I   +  Y+SLI    + G+++EA  
Sbjct: 401 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYL 460

Query: 325 YFKIMKSHSLVPGVDIYESLV 345
             + +    L P V  +  L+
Sbjct: 461 IMEELMQKGLTPNVYTWNCLL 481



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 143/311 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +   GF     S++ LIH + K+   +  + ++  M E     +      +I   CK 
Sbjct: 323 REINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKS 382

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G++     +L+ +  K   P V+   S+I  + + +R++E  +L +      +  + + Y
Sbjct: 383 GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVY 442

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S ++    K+  ++ A ++ EE++++G + N + +   + A  +  +I EA    Q M++
Sbjct: 443 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 502

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
               P   T+++LI G  + ++  ++  + ++M    L P+   +  MI  L + GN  +
Sbjct: 503 LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 562

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A+G+ +     G  P+  +Y+ +I G +   +  +   L+ E   K  +        L+ 
Sbjct: 563 ASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLD 622

Query: 312 SLCQCGKLEEA 322
           +L +   LE+A
Sbjct: 623 ALHKAECLEQA 633



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 140/306 (45%), Gaps = 17/306 (5%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV----------YAKV 139
            P   ++  L+   ++  ++ E   +++ M +        AY++++          +   
Sbjct: 7   GPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLC 66

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   L+ A+ ++E++ +      ++ Y T I  Y   GK +EA  L++  +  G  P   
Sbjct: 67  KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 126

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
            +N ++    K +R+EE+L   E+M  R  +P+   +N +I  LC  G   + N  L + 
Sbjct: 127 AYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREG---KLNAALEIR 182

Query: 260 LD---KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            D    G  PN +T + +I    K  +++E   ++  M+ K  +P    ++SLI  L +C
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           G++++A   ++ M     VPG  +Y SL+    + G K     + +EMV  G  P  + +
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 377 CSASTC 382
            +   C
Sbjct: 303 NTYMDC 308



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 102/217 (47%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   ++ +G   +++++ ++I  + K DR D  + +++    N    N     +LI 
Sbjct: 388 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 447

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              K G++     +++ +  K  +P V     L+  +++ E I E ++  + M       
Sbjct: 448 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 507

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS+++    ++R    A V ++EM K G   N+  YTT I    + G I EA+ L 
Sbjct: 508 NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 567

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
              +  G  P   ++N +IEG + A +  ++ +  E+
Sbjct: 568 SRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 604



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR------ 242
           M  +G  P       L+  C K++++ E+    + M   K  P+ SA+  +I +      
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 243 ----LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
               LC+     +A  +          P    Y+ +I GY   G+  E   L    + K 
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P++ AY  +++ L +  ++EEA + F+ MK  + VP V  Y  L+ +   +G    AL
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAAL 179

Query: 359 HLCEEMVSEGLKPST 373
            + ++M   GL P+ 
Sbjct: 180 EIRDDMERAGLFPNV 194



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 10/132 (7%)

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS---------- 312
           GF P+      L+    K  +++E   +   M      P   AYT LI            
Sbjct: 5   GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           LC+  +L+EA + F+ ++ +  VP    Y +++  +   G   +A  L E   ++G  PS
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 373 TSYLCSASTCRG 384
                   TC G
Sbjct: 125 VIAYNCILTCLG 136


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 180/388 (46%), Gaps = 36/388 (9%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI----RTLISALCKGGQLQTYVDMLD 82
           + L+ + + S   D    +Y  M ++   P+  ++    RTL+ +      L  + D++D
Sbjct: 91  DNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVID 150

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
              G R  P  +     +   +  + +++G  L+K M++  M     AY+L++    K+R
Sbjct: 151 --SGTR--PDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVR 206

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            ++ A  +++EM++R    N+  Y T I  YC+ G IEEA    + M+   ++    T+N
Sbjct: 207 RIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYN 266

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPS---CSAFNE--------------------- 238
            L+ G   + R++++     +M     LP       F++                     
Sbjct: 267 SLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDER 326

Query: 239 ----MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
               ++  LC  G  ++A  +L   ++ G +P++I+Y+ L+  Y +EG++++ +    +M
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
           E + + P    + ++IS  C+ G+++ A+ + + M    + P V+ Y SL+  + +KG+ 
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446

Query: 355 AKALHLCEEMVSEGLKPSTSYLCSASTC 382
            +     +EM   G+KP+     S   C
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINC 474



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 158/325 (48%), Gaps = 1/325 (0%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           +   ++EN   P++ +   L++A C+ G ++  +   +++  +   P  I   ++I +  
Sbjct: 347 VLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFC 406

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +   ++     ++RM+ K +      Y+ ++    +  +        +EM K G   N  
Sbjct: 407 ETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVI 466

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            Y + I   C+  K+ +A  ++ +M   G+ P  E +N+LIE      +++++  + ++M
Sbjct: 467 SYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEM 526

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
           +   +  +   +N +I  L   G  K+A  +      KG +P+ ITY+ LI GYAK    
Sbjct: 527 IQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNT 586

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
           Q+ L+LY +M+   I PT+  +  LI + C+   +   DK F+ M    LVP   +Y  +
Sbjct: 587 QKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEM 645

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGL 369
           +  + E GN  KA+ L ++MV +G+
Sbjct: 646 IYSYAEDGNVMKAMSLHQQMVDQGV 670



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/434 (21%), Positives = 175/434 (40%), Gaps = 63/434 (14%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++ + A D+   + + GF  S  S N L+  +  S   +    ++  ++++   P+    
Sbjct: 101 KMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAY 160

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              + A      L    +++  +      P V     ++  + +  RI++   L   M++
Sbjct: 161 GKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQ 220

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +NM+ +T+ Y+ ++    K+  +E AL   E M ++    N   Y + +   C  G++++
Sbjct: 221 RNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDD 280

Query: 182 ANCLMQEMENAGLKP-------YDE---------------------TFNLLIEGCAKAKR 213
           A  ++ EME +G  P       +D+                     T+ +L+ G  +  R
Sbjct: 281 AREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGR 340

Query: 214 IEESL-----------------------SYC------------EQMMSRKLLPSCSAFNE 238
           IE++                        +YC            EQM  R L P+   FN 
Sbjct: 341 IEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNT 400

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I + CE G    A   +   ++KG SP   TY+ LI GY ++G      +   EM+   
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I P + +Y SLI+ LC+  KL +A+     M    + P  +IY  L+           A 
Sbjct: 461 IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAF 520

Query: 359 HLCEEMVSEGLKPS 372
              +EM+  G+  +
Sbjct: 521 RFFDEMIQSGIDAT 534



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 159/356 (44%), Gaps = 1/356 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+RG   + I+FNT+I    ++   D      + M+E    P   T  +LI+   + G 
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGH 445

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                + LD +      P VI   SLI  + ++ ++ +  ++L  M+ + +  +   Y++
Sbjct: 446 FVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNM 505

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A   +  L+ A   ++EM++ G  A    Y T I      G++++A  L  +M   G
Sbjct: 506 LIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG 565

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T+N LI G AK+   ++ L   ++M    + P+   F+ +I   C        +
Sbjct: 566 CNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI-YACRKEGVVTMD 624

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            M    L     P++  Y+ +I  YA++G + + + L+ +M  + +      Y SLI + 
Sbjct: 625 KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAY 684

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
            +  ++ E       MK+  LVP VD Y  L+    +  +   A     EMV  GL
Sbjct: 685 LRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 170/387 (43%), Gaps = 28/387 (7%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QR    + +++NTLI    K    +      + M E     N  T  +L++ LC  G++ 
Sbjct: 220 QRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVD 279

Query: 76  TYVDMLDRIHGKRCSP-----MVIVNTS-----------------------LILRIIQEE 107
              ++L  + G    P      V  + S                       L+  + +  
Sbjct: 280 DAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVG 339

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           RIE+   +L +++   +    I+Y+++V A  +  +++ A++  E+M +RG   N   + 
Sbjct: 340 RIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFN 399

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           T I  +CE G+++ A   ++ M   G+ P  ET+N LI G  +         + ++M   
Sbjct: 400 TVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKA 459

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            + P+  ++  +I  LC+      A  +L   + +G SPN   Y+ LI       ++++ 
Sbjct: 460 GIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDA 519

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            + + EM    I  TL  Y +LI+ L + G++++A+  F  M      P V  Y SL+  
Sbjct: 520 FRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISG 579

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTS 374
           + +  N  K L L ++M   G+KP+  
Sbjct: 580 YAKSVNTQKCLELYDKMKILGIKPTVG 606



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 12/251 (4%)

Query: 9   DVCRYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  R+ +   Q G   +L+++NTLI+ + ++ R      ++  M      P+  T  +LI
Sbjct: 518 DAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLI 577

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV----LLKRMLR 121
           S   K    Q  +++ D++      P V     LI    +E     G+V    + + ML+
Sbjct: 578 SGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKE-----GVVTMDKMFQEMLQ 632

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
            +++ D   Y+ ++Y+  +  N+  A+ ++++M+ +G   +   Y + I AY    ++ E
Sbjct: 633 MDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSE 692

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
              L+ +M+  GL P  +T+N+LI+G    K    +  +  +M+ R LL + S   ++I 
Sbjct: 693 IKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLIS 752

Query: 242 RLCECGNAKQA 252
            L E G  ++A
Sbjct: 753 GLREEGMLREA 763


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 180/370 (48%), Gaps = 10/370 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           +F +   + + G+  + I++ TL+  +        +   +  ++      N+ +  TL++
Sbjct: 64  SFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLN 123

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+ +  + +L  I  +   P V++ +++I  + +++ + E   L   M  + +  
Sbjct: 124 GLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFP 183

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I Y+ ++ A      L  A  +  EM+ +  + + + ++  I A C+ GK   A  + 
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIF 241

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M   G+ P   ++N++I G  K KR++E+++   +M+ + ++P    +N +I  LC+ 
Sbjct: 242 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 301

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  ++     +G   + +TY+ L+    K   + +   L+ +M+ + I PT+  Y
Sbjct: 302 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 361

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPG--VDIYESLVGIH--LEKGNKAKALHLCE 362
           T+LI  LC+ G+L+ A + F+    H LV G  +D++   V I    ++G   +AL +  
Sbjct: 362 TALIDGLCKGGRLKNAQELFQ----HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417

Query: 363 EMVSEGLKPS 372
           +M   G  P+
Sbjct: 418 KMEDNGCIPN 427



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 162/353 (45%), Gaps = 2/353 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           + F  + +S+ TL++ + K+       ++ + + +    PN      +I  LCK   +  
Sbjct: 109 QAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNE 168

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+   +  +   P VI   +LI       ++     LL  M+ KN+  D   +S+++ 
Sbjct: 169 AYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILID 228

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K    ++A  ++  M++ G + N + Y   I   C+  +++EA  L++EM +  + P
Sbjct: 229 ALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP 286

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+N LI+G  K+ RI  +L+   +M  R        +  ++  LC+  N  +A  + 
Sbjct: 287 DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALF 346

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               ++G  P   TY+ LI G  K G ++   +L+  +  K     +  YT +IS LC+ 
Sbjct: 347 MKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKE 406

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           G  +EA      M+ +  +P    +E ++    EK    KA  L  EM+++GL
Sbjct: 407 GMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 148/301 (49%), Gaps = 8/301 (2%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEAT 60
           +L   A+D+   ++ R    ++I++NTLI     + +    + +   M L+NI  P+  T
Sbjct: 164 KLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNIN-PDVYT 222

Query: 61  IRTLISALCKGGQ--LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
              LI ALCK G+   Q +  M+        +P V     +I  + + +R++E M LL+ 
Sbjct: 223 FSILIDALCKEGKNAKQIFHAMVQM----GVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 278

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           ML KNM+ DT+ Y+ ++    K   + SAL +  EM  RG  A+   YT+ + A C+   
Sbjct: 279 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN 338

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +++A  L  +M+  G++P   T+  LI+G  K  R++ +    + ++ +        +  
Sbjct: 339 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 398

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           MI  LC+ G   +A  + +   D G  PN +T+  +I    ++ E  +  KL +EM  K 
Sbjct: 399 MISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458

Query: 299 I 299
           +
Sbjct: 459 L 459



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 147/348 (42%), Gaps = 39/348 (11%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL----------------- 99
           N  T+  LI+  C  GQ+     +L +I      P  I  T+L                 
Sbjct: 44  NLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFH 103

Query: 100 ---ILRIIQEERIEEGMVL--------------LKRMLR-KNMIHDTIAYSLIVYAKVKM 141
              + +  Q  ++  G +L              L RM+  ++   + + YS I+    K 
Sbjct: 104 DKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKD 163

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
           + +  A  +Y EM  R    N   Y T I A+C  G++  A  L+ EM    + P   TF
Sbjct: 164 KLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTF 223

Query: 202 NLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           ++LI+  C + K  ++      QM      P+  ++N MI  LC+C    +A  +L   L
Sbjct: 224 SILIDALCKEGKNAKQIFHAMVQMGVN---PNVYSYNIMINGLCKCKRVDEAMNLLREML 280

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            K   P+ +TY+ LI G  K G I   L L  EM ++     +  YTSL+ +LC+   L+
Sbjct: 281 HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLD 340

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +A   F  MK   + P +  Y +L+    + G    A  L + ++ +G
Sbjct: 341 KATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 153/330 (46%), Gaps = 4/330 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E R    +++ ++ +I  + K    +  + +Y  M     +PN  T  TLI 
Sbjct: 134 AIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLIC 193

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C  GQL     +L  +  K  +P V   + LI  + +E +      +   M++  +  
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNP 251

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +  +Y++++    K + ++ A+ +  EML +    ++  Y + I   C+ G+I  A  LM
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311

Query: 187 QEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            EM + G +P D  T+  L++   K + ++++ +   +M  R + P+   +  +I  LC+
Sbjct: 312 NEMHHRG-QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 370

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  K A  +    L KG   +  TY+ +I G  KEG   E L +  +ME     P    
Sbjct: 371 GGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVT 430

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
           +  +I SL +  + ++A+K    M +  L+
Sbjct: 431 FEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 117/245 (47%), Gaps = 2/245 (0%)

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           I ++ I+ + VK++   + + + ++M  +G   N    +  I  +C  G++  +  L+ +
Sbjct: 11  IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           +   G  P   T+  L++G      +++ L + ++++++    +  ++  ++  LC+ G 
Sbjct: 71  ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            + A  +L +  D+   PN + YS +I G  K+  + E   LY EM+ + I P +  Y +
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT 190

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI + C  G+L  A      M   ++ P V  +  L+    ++G  AK +     MV  G
Sbjct: 191 LICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIF--HAMVQMG 248

Query: 369 LKPST 373
           + P+ 
Sbjct: 249 VNPNV 253


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/371 (20%), Positives = 167/371 (45%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A+ +   +  +G S  ++++N++I  ++K+   D    +   M++N   PN  T 
Sbjct: 217 RQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITH 276

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L+   C  G+    + +  R+      P V    +L+  + +  R  E   +   M++
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           +    ++  Y  +++      +L     + + M++ G   + +++   IG Y ++GK+++
Sbjct: 337 RGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDD 396

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L  +M   GL P   T+ ++++      +++++++   +++S  L P    F  +I 
Sbjct: 397 AMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIH 456

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC      +A  +    + +G  PN I ++ L+    KEG +     ++  M    +  
Sbjct: 457 GLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQR 516

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI   C  GK++EA K  + M    + P    Y +++  + + G    A  L 
Sbjct: 517 DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLF 576

Query: 362 EEMVSEGLKPS 372
            +M S+G+ P 
Sbjct: 577 RQMASKGVNPG 587



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 3/357 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           G+   ++S+NT+I+ + +  R  D  + ++  ML+    P+  T  ++ISAL K   +  
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDK 256

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY-SLIV 135
              +L R+      P  I + SL+       +  + + + KRM R  +  D   Y +L+ 
Sbjct: 257 AAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMG 316

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           Y     R++E A  +++ M+KRG   NS  Y T +  Y   G + + + L+  M   G++
Sbjct: 317 YLCKNGRSME-ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQ 375

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    FN+LI    K  ++++++    +M  + L P    +  ++  LC  G    A   
Sbjct: 376 PDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               + +G +P+ + + +LI G     +  +  +L  EM  + I P    + +L++ LC+
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCK 495

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G +  A   F +M    +   V  Y +L+  +   G   +A  L E MV +G+KP+
Sbjct: 496 EGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPN 552



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 153/326 (46%), Gaps = 1/326 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V + + + G    + ++NTL+  + K+ R+    +I+  M++    PN AT  TL+ 
Sbjct: 292 AIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLH 351

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G L     +LD +      P   +   LI    +  ++++ M+L  +M R+ +  
Sbjct: 352 GYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNP 411

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           DT+ Y +++ A   +  ++ A+  +  ++  G + ++ V+   I   C   K ++A  L 
Sbjct: 412 DTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELA 471

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM   G+ P +  FN L+    K   +  + +  + M+   +      +N +I   C  
Sbjct: 472 VEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLH 531

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +L   +  G  PNE+TY+ +I GY K G I++   L+ +M  K ++P +  Y
Sbjct: 532 GKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTY 591

Query: 307 TSLISSLCQCGKLEEADK-YFKIMKS 331
           ++++  L Q  +   A + Y  ++KS
Sbjct: 592 STILQGLFQARRTAAAKELYLWMIKS 617



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 172/381 (45%), Gaps = 9/381 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIR 62
            ++AF     + + G++   I+F+ L+  +    R      I    +  +   PN  +  
Sbjct: 107 LDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYT 166

Query: 63  TLISALCKGGQLQTYVDML------DRIHGKRCSPMVIVNTSLILRIIQEER-IEEGMVL 115
            L+  LC   + Q  + +L      D   G    P V+   ++I  +++E R ++    L
Sbjct: 167 ILLKGLCDENRSQQALHLLHTMMVADDTRGGY-PPDVVSYNTVINGLLREGRQLDTAYHL 225

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             +ML + +  D + Y+ I+ A  K R ++ A VV   M+K G   N   + + +  YC 
Sbjct: 226 FDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCS 285

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK  +A  + + M   G++P   T+N L+    K  R  E+    + M+ R   P+ + 
Sbjct: 286 SGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSAT 345

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +  ++      G+  + + +L + +  G  P+   ++ LIG Y K G++ + + L+ +M 
Sbjct: 346 YGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMR 405

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            + ++P    Y  ++ +LC  GK+++A   F  + S  L P   ++ +L+     +    
Sbjct: 406 RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWD 465

Query: 356 KALHLCEEMVSEGLKPSTSYL 376
           KA  L  EM+  G+ P+  + 
Sbjct: 466 KAEELAVEMIGRGICPNNIFF 486



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 149/327 (45%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN LI   TK  + D    ++  M      P+  T   ++ ALC  G++   +    R+ 
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  +P  +V  +LI  +   ++ ++   L   M+ + +  + I ++ ++    K   + 
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVA 500

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  +++ M++     +   Y T I  YC +GK++EA  L++ M   G+KP + T+N +I
Sbjct: 501 RAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMI 560

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  RIE++ S   QM S+ + P    ++ +++ L +      A  +    +  G  
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            +  TY+ ++ G  +     + L+++  +           +  +I +L + G+ +EA   
Sbjct: 621 FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDL 680

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKG 352
           F  + +  LVP V  Y  ++   +E+G
Sbjct: 681 FASLLARGLVPNVVTYWLMMKSLIEQG 707



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/344 (20%), Positives = 145/344 (42%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G +   +++  ++  +    + D     +  ++     P+    R LI  LC   +
Sbjct: 404 MRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDK 463

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
                ++   + G+   P  I   +L+  + +E  +     +   M+R ++  D I Y+ 
Sbjct: 464 WDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT 523

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++        ++ A  + E M+  G   N   Y T I  YC+ G+IE+A  L ++M + G
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ +++G  +A+R   +      M+   +      +N ++  LC+      A 
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDAL 643

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +        F     T++ +I    K G   E   L+  +  + + P +  Y  ++ SL
Sbjct: 644 RIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 703

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + G LEE D  F  ++ +       +  +LVG  L+KG   KA
Sbjct: 704 IEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKA 747



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 13/183 (7%)

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           T++++I+ C++   ++ + +   +++          F+ +++ LC+    K+ +  + +A
Sbjct: 93  TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCD---KKRTSEAMDIA 149

Query: 260 LDK----GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS-----PTLPAYTSLI 310
           L +    G +PN  +Y+ L+ G   E   Q+ L L + M     +     P + +Y ++I
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209

Query: 311 SSLCQCGK-LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           + L + G+ L+ A   F  M    L P V  Y S++    +     KA  +   MV  G 
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGA 269

Query: 370 KPS 372
            P+
Sbjct: 270 MPN 272


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 159/370 (42%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR                +I  + K     LVW  Y+  LE   YP       
Sbjct: 97  FRVPFDTCR---------------KVIEHLMKLKYFKLVWGFYEESLE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G+++    + D I      P V+                            
Sbjct: 141 ILMHNFCKEGEIRLAQSVFDSITKWGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +++ ++   +K+ +L+    +   M   G   + + ++  I   C+  K+++A
Sbjct: 173 -------SFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM B GL P   TF  LI+G  K  R++ ++    QM+S+ LLP    +N +I  
Sbjct: 226 NELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQ   ++     KG  P++ITY+ LI G  KEG+++   +    M  ++I   
Sbjct: 286 LCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M S  L P +  Y  ++    +KG+      L +
Sbjct: 346 DXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 363 EMVSEGLKPS 372
           EM   G  P+
Sbjct: 406 EMQRXGYXPN 415



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDS---ITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + ++ML
Sbjct: 209 HSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            ++++ D I Y+ ++Y   K  +L+    + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ PN +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   +IE   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVIEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++   C+ G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  ++ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ +  +M+S+ L P 
Sbjct: 257 VDLAMEIYRQMLSQSLLPD 275


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 169/348 (48%), Gaps = 5/348 (1%)

Query: 1   MRLFEVAF--DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNE 58
           +RL E+A   +V   ++ RG   +++SFNT+I  + ++   D    +++ M E    P+ 
Sbjct: 127 VRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV 186

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            T   LI  LC+ G+++    + +++ G+   P  +V T LI    ++   E  + L + 
Sbjct: 187 YTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHRE 246

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M  + +  D + Y+ IV    + R+L+SA  +  EM   G   ++  YTT I  YC+  +
Sbjct: 247 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 306

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++ A  + Q M   G+   + T+  LI G +KA R  ++     +MM   L P  + +  
Sbjct: 307 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 366

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C  G+ K    +L    +KG  P  +TY+ ++ G+ K G+++    L   M    
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
           +SP    Y  L+   C+ GK+ + +   ++  +   VP + +Y S+VG
Sbjct: 427 VSPDDITYNILLDGHCKHGKVTDIE---ELKSAKGTVPDLGVYTSIVG 471



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 120/258 (46%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           +   M  + +    ++++ ++    +  +L+ A  ++  M + G + + + Y   I   C
Sbjct: 138 VFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLC 197

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G+IE+A  + ++M   G+KP    F +LI+   K    E  L    +M  R + P   
Sbjct: 198 RVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAV 257

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N ++  LC   + K A+G++      G  P+ +TY+ LI GY KE E+   +++   M
Sbjct: 258 TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 317

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             + +      YT+LIS L + G+  +A++    M    L P    Y  ++     KG+ 
Sbjct: 318 VAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDV 377

Query: 355 AKALHLCEEMVSEGLKPS 372
              L L +EM ++G KP 
Sbjct: 378 KTGLRLLKEMQNKGRKPG 395



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 145/327 (44%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           Y  +L+    P       L+  L + G+L +  ++ D +  +     V+   ++I  + +
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
              ++    L +RM    +  D   Y  ++    ++  +E A  V+E+M  RG   N+ V
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           +T  I A+C+ G  E    L +EM   G++P   T+N ++ G  +A+ ++ +     +M 
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           S  L P    +  +I   C+      A  +    + +G   +E+TY+ LI G +K G   
Sbjct: 284 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 343

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +  ++  EM    + P    YT +I + C+ G ++   +  K M++    PGV  Y  ++
Sbjct: 344 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 403

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               + G    A  L   M++ G+ P 
Sbjct: 404 NGFCKLGQMKNADMLLNAMINIGVSPD 430



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 9/250 (3%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +++++   V++  L SA  V++EM  RG       + T I   C  G ++ A  L + M 
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            AG+ P   T+  LI+G  +  RIE++    E+M  R + P+   F  +I   C+ G+A+
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 238

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
               +     ++G  P+ +TY+ ++ G  +  +++    +  EM    + P    YT+LI
Sbjct: 239 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 298

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDI----YESLVGIHLEKGNKAKALHLCEEMVS 366
              C   K EE D   +I K + +  GV +    Y +L+    + G  A A  +  EM+ 
Sbjct: 299 DGYC---KEEELDMAMEI-KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 354

Query: 367 EGLKP-STSY 375
            GL+P +T+Y
Sbjct: 355 AGLEPDNTTY 364



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 107/223 (47%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A   Y ++L  G    + ++   +      G++  A  +  EM++ G++    +FN +I 
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 159

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  +A  ++ + +   +M    + P    +  +I+ LC  G  + A G+      +G  P
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N + ++ LI  + K+G+ + +L+L+ EM  + + P    Y ++++ LC+   L+ A    
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 279

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             M+S  L P    Y +L+  + ++     A+ + + MV+EG+
Sbjct: 280 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGV 322



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 3/219 (1%)

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           L+RG        T+  G    +    EA     ++ +AGL P  + FN+L+    +   +
Sbjct: 76  LRRGIRLEP---TSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGEL 132

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
             + +  ++M SR +  +  +FN MI  +C  G+   A  +     + G +P+  TY  L
Sbjct: 133 ASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGAL 192

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G  + G I++   ++ +M  + + P    +T LI + C+ G  E   +  + M+   +
Sbjct: 193 IQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGV 252

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            P    Y ++V       +   A  +  EM S GL+P T
Sbjct: 253 RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDT 291


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 188/379 (49%), Gaps = 5/379 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR    AF V   + +RGF+ ++ + N L+  + ++        + + M  N   P+  +
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             T+I   C+G +L+  +++ + + G  CS  ++    LI    +  +++E M  LK M 
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  D + Y+ ++        L+    +++E+L+RG S  +  Y T I  +C+ G+++
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA+ + + M   G++P   T+  LI+G     + +E+L     M+ +   P+   +N +I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIII 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-- 298
            +LC+ G    A  ++ L   +   P+ ITY+ L+GG   +G++ E  KL Y M   S  
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES-LVGIHLEKGNKAKA 357
             P + +Y +LI  LC+  +L +A   + ++    L  G  +  + L+   L+ G+  KA
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLL-VEKLGAGDRVTTNILLNSTLKAGDVNKA 478

Query: 358 LHLCEEMV-SEGLKPSTSY 375
           + L +++  S+ ++ S +Y
Sbjct: 479 MELWKQISDSKIVRNSDTY 497



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 35/319 (10%)

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           S +    ++L+ ++++    E      ++ML  +   + ++ S ++   V+MR    A  
Sbjct: 69  SSLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFG 128

Query: 150 VYEEMLKRGFSAN-----------------------------------SFVYTTFIGAYC 174
           V   MLKRGF+ N                                    F Y T I  +C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           E  ++E+A  L  EM+ +G      T+ +LI+   KA +++E++ + ++M    L     
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +  +IR  C+CG   +   +    L++G SP  ITY+ LI G+ K G+++E  +++  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             + + P +  YT LI  LC  GK +EA +   +M      P    Y  ++    + G  
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368

Query: 355 AKALHLCEEMVSEGLKPST 373
           A A+ + E M     +P  
Sbjct: 369 ADAVEIVELMKKRRTRPDN 387



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 173/375 (46%), Gaps = 4/375 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++  ++ +RG   ++ ++  LI  +    +     +    M+E    PN  T   +I+
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIIN 360

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--M 124
            LCK G +   V++++ +  +R  P  I    L+  +  +  ++E   LL  ML+ +   
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D I+Y+ +++   K   L  AL +Y+ ++++  + +       + +  + G + +A  
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L +++ ++ +    +T+  +I+G  K   +  +     +M   +L PS   +N ++  LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 245 ECGNAKQANGMLT-LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           + G+  QA  +   +  D  F P+ ++++ +I G  K G+I+    L   M    +SP L
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+ LI+   + G L+EA  +F  M      P   I +S++   + +G   K   L ++
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659

Query: 364 MVSEGLKPSTSYLCS 378
           +V + +       C+
Sbjct: 660 LVDKDIVLDKELTCT 674



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/399 (21%), Positives = 163/399 (40%), Gaps = 38/399 (9%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G    L+ + +LI         D    ++  +LE    P   T  TLI   CK GQL+  
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
            ++ + +  +   P V   T LI  +    + +E +  L  M+ K+   + + Y++I+  
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINK 361

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-------- 189
             K   +  A+ + E M KR    ++  Y   +G  C  G ++EA+ L+  M        
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421

Query: 190 ---------------EN---AGLKPYD-----------ETFNLLIEGCAKAKRIEESLSY 220
                          EN     L  YD            T N+L+    KA  + +++  
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            +Q+   K++ +   +  MI   C+ G    A G+L         P+   Y+ L+    K
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           EG + +  +L+ EM+  +  P + ++  +I    + G ++ A+     M    L P +  
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
           Y  L+   L+ G   +A+   ++MV  G +P  +++C +
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPD-AHICDS 639


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 152/332 (45%), Gaps = 37/332 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G +             R +P+V      
Sbjct: 114 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDI-------------RVAPLVFD---- 155

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                          + K  LR +++    +Y+ ++   +++ +L+    +   M   G 
Sbjct: 156 --------------AITKWGLRPSVV----SYNTLMNGYIRLGDLDEGFRLKSAMRASGV 197

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+   +++AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 198 QPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAME 257

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ LLP    +N ++  LC+ G+  QA+G++     KG  P++ TY+ LI G  
Sbjct: 258 IYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCC 317

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 318 KEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTG 377

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            Y  ++    +KG+  K   L +EM   G  P
Sbjct: 378 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 409



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 145/312 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 109 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVS 168

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E  +++   L   ML
Sbjct: 169 YNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEML 228

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A+ +Y++ML +    +   Y T +   C+ G + 
Sbjct: 229 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLN 288

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 289 QAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALI 348

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 349 SGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHV 408

Query: 301 PTLPAYTSLISS 312
           P +  Y  L++ 
Sbjct: 409 PXVVTYNVLMNG 420



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 109/232 (46%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K+R  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 107 MKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSV 166

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 167 VSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDE 226

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  + + P J  Y +L+  LC+ G 
Sbjct: 227 MLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGD 286

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L +A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 287 LNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIR 338



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 4/242 (1%)

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYCEYGKIEEA-NCLMQEME 190
           ++   V  +   SA  V+  +L+   +  S  +V++  I AY E G + +A  C     E
Sbjct: 30  LIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTRE 89

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           +    P+D T   ++E   K +  +    + E+++      S   FN ++ R C+ G+ +
Sbjct: 90  HKLWVPFD-TCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIR 148

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +       G  P+ ++Y+ L+ GY + G++ E  +L   M    + P +  Y+ LI
Sbjct: 149 VAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLI 208

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           + LC+   +++A++ F  M    LVP    + +L+  H + G    A+ + ++M+S+ L 
Sbjct: 209 NGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLL 268

Query: 371 PS 372
           P 
Sbjct: 269 PD 270


>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           barbata]
          Length = 429

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 137/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  ++  I     +   + +  +    ++Y+ ++   +++ +L     +   ML  G
Sbjct: 146 LMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASG 205

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K  R++ ++
Sbjct: 206 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAM 265

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG   ++ITY+ LI G 
Sbjct: 266 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGC 325

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P  
Sbjct: 326 CKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDT 385

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+  K   L ++M   G  PS
Sbjct: 386 XTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPS 419



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 143/312 (45%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     +   G       FN L+H   K     +   ++  + +    P+  +
Sbjct: 118 LKYFKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVS 177

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 178 YNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +  + + ++ ++    K   ++ A+ +Y++ML +    +   Y T I   C+ G ++
Sbjct: 238 VKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 297

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLK    T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 298 QAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALI 357

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  +M+    +
Sbjct: 358 SGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHA 417

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 418 PSVVTYNVLMNG 429


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 137/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + +  +    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  +      KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGS 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG ++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVJEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L  EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYVPSV 416



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIR 343



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD    + + G   S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDA---ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFS--ANSFVYTTFIGAYC 174
            MIH    + +I  AK      V  +   SA  V+  +L+   +  ++ +V++  I AY 
Sbjct: 18  TMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   +JE   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVJEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +       G  P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNX 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 167/372 (44%), Gaps = 3/372 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M LFE A  V R ++    S + +S   +++ + +  R D VW  YQ M+     P+   
Sbjct: 145 MGLFEEALWVSREMKCSPDSKACLS---ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHI 201

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L     K G       +LD +      P V + T  IL + ++ ++EE   + + M 
Sbjct: 202 YFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK 261

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +  ++ +   YS ++    K  N+  A  +Y+E+L      N  V+ T +  +C+  ++ 
Sbjct: 262 KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELV 321

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L   M   G+ P    +N LI G  K+  + E++    +M S  L P    +  +I
Sbjct: 322 TARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC      +AN +     ++   P+  TY+ LI GY KE  +++ L L  EM    + 
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVE 441

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  +++LI   C    ++ A   +  M    +VP V  Y +L+  H ++ N  +AL L
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501

Query: 361 CEEMVSEGLKPS 372
             +M+  G+ P+
Sbjct: 502 YSDMLEAGIHPN 513



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 156/364 (42%), Gaps = 35/364 (9%)

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
           ++++ M ++   PN  T   +I   CK G ++    +   I      P V+V  +L+   
Sbjct: 255 KMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGF 314

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +   +     L   M++  +  +   Y+ +++   K  N+  A+ +  EM     S + 
Sbjct: 315 CKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
           F YT  I   C   ++ EAN L Q+M+N  + P   T+N LI G  K   +E++L  C +
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSE 434

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M +  + P+   F+ +I   C   + K A G+      KG  P+ +TY+ LI  + KE  
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494

Query: 284 IQEVLKLYYEMEYKSISPT-----------------------------------LPAYTS 308
           ++E L+LY +M    I P                                       +T 
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC 554

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI  LCQ G +  A ++F  M+S  + P +  Y S++  HL++      + L  +M+  G
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614

Query: 369 LKPS 372
           + P+
Sbjct: 615 ILPN 618



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 170/388 (43%), Gaps = 51/388 (13%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           S  L SF+ +IHV+T + +  L   + + ++E ++  +E +  +               +
Sbjct: 72  SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMS-----------HRLFN 120

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
            L+ I   + S  + V + LI+  ++    EE + + + M       D+ A   I+   V
Sbjct: 121 ALEDIQSPKFS--IGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLV 175

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           + R  +S  V Y+ M+ RG   +  +Y        + G   +   L+ EM + G+KP   
Sbjct: 176 RRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY 235

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG----- 254
            + + I    +  ++EE+    E M    +LP+   ++ MI   C+ GN +QA G     
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295

Query: 255 ------------------------------MLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                                         +    +  G  PN   Y+ LI G+ K G +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            E + L  EME  ++SP +  YT LI+ LC   ++ EA++ F+ MK+  + P    Y SL
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  + ++ N  +AL LC EM + G++P+
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPN 443



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 19/307 (6%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++ F TL+    K+        ++ HM++    PN      LI   CK G +   V +L
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
             +     SP V   T LI  +  E+++ E   L ++M  + +   +  Y+ +++   K 
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N+E AL +  EM   G   N   ++T I  YC    I+ A  L  EM   G+ P   T+
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             LI+   K   ++E+L     M+   + P+   F  ++       +     G L++A+D
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV-------DGFWKEGRLSVAID 535

Query: 262 -------KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                  +    N + ++ LI G  + G I    + + +M    I+P + +Y S++    
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK--- 592

Query: 315 QCGKLEE 321
             G L+E
Sbjct: 593 --GHLQE 597



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 128/286 (44%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   +L  +N LIH   KS        +   M      P+  T   LI+ LC   Q+   
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +  ++  +R  P      SLI    +E  +E+ + L   M    +  + I +S ++  
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              +R++++A+ +Y EM  +G   +   YT  I A+ +   ++EA  L  +M  AG+ P 
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
           D TF  L++G  K  R+  ++ + ++   ++   +   F  +I  LC+ G   +A+   +
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
                G +P+  +Y  ++ G+ +E  I + + L  +M    I P L
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL 619



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/166 (20%), Positives = 64/166 (38%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    ++++  LI    K        R+Y  MLE   +PN+ T   L+    K G+L  
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            +D     + +R     +  T LI  + Q   I         M    +  D  +Y  ++ 
Sbjct: 533 AIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
             ++ + +   +++  +M+K G   N  V       Y   G ++ A
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 180/397 (45%), Gaps = 28/397 (7%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            +AF V   + + G+    ++  TLI  +    +       +  +L      ++ +  TL
Sbjct: 115 NLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTL 174

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ +CK G+ +  + +L RI G+   P V++  ++I  + + + + E   L   M  K +
Sbjct: 175 INGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGI 234

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + YS I++    +  L  AL    EM+ +  + + ++Y T + A  + GK++EA  
Sbjct: 235 SANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKN 294

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAK---------------------------AKRIEES 217
           ++  +    LKP   T+N LI+G AK                            KR+EE+
Sbjct: 295 VLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEA 354

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           L+  ++M  + ++P+   +N +I  LC+ G    A  ++    D+G   N ITY+ LI G
Sbjct: 355 LNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLING 414

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS-LCQCGKLEEADKYFKIMKSHSLVP 336
             K G++ + + L  +M+ + I P +     L+   LC+  +L+ A   F+ +      P
Sbjct: 415 LCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHP 474

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            V  Y  ++  H ++G   +A  L  +M   G  P+ 
Sbjct: 475 NVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNA 511



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/392 (22%), Positives = 164/392 (41%), Gaps = 30/392 (7%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           +I FN ++    K      V  + + +      P+  T+  LI+  C  GQ+     +L 
Sbjct: 63  IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLS 122

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           +I      P  +  T+LI  +  + ++++ +    ++L +    D ++Y  ++    K+ 
Sbjct: 123 KILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIG 182

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
              +A+ +   +  R    N  +Y T I   C+   + EA  L  EM   G+     T++
Sbjct: 183 ETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYS 242

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +I G     ++ E+L +  +M+ + + P    +N ++  L + G  K+A  +L + +  
Sbjct: 243 AIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKT 302

Query: 263 GFSPNEITYSHLIGGYAKE---------------------------GEIQEVLKLYYEME 295
              PN ITY+ LI GYAK                              ++E L LY EM 
Sbjct: 303 CLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMH 362

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K++ P    Y SLI  LC+ G++  A      M        V  Y SL+    + G   
Sbjct: 363 QKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLD 422

Query: 356 KALHLCEEMVSEGLKP---STSYLCSASTCRG 384
           KA+ L  +M  +G++P   + + L     C+G
Sbjct: 423 KAIALINKMKDQGIQPDMYTLNILLHGLLCKG 454



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 28/346 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++ R    +++ +NT+I  + K         ++  M       N  T   +I 
Sbjct: 187 AIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIH 246

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEG----MVLLKRMLRK 122
             C  G+L   +  L+ +  K  +P V +  +L+  + +E +++E      V++K  L+ 
Sbjct: 247 GFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKP 306

Query: 123 NMI-----------------------HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           N+I                        D  +Y++++    K++ +E AL +Y+EM ++  
Sbjct: 307 NVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNM 366

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             N+  Y + I   C+ G+I  A  L+ EM + G      T+N LI G  K  +++++++
Sbjct: 367 VPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIA 426

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRL-CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +M  + + P     N ++  L C+    K A G+    LDKG+ PN  TY+ +I G+
Sbjct: 427 LINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGH 486

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            KEG + E   L  +ME    SP    +  +I +L + G+ ++A+K
Sbjct: 487 CKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEK 532



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 123/267 (46%)

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           E +++ +    RML        I ++ I+ +  KM++  + + +   +  +    + F  
Sbjct: 42  ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              I  +C  G+I  A  ++ ++   G +P   T   LI+G     +++++L + +++++
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           +       ++  +I  +C+ G  + A  +L     +   PN + Y+ +I    K   + E
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
              L+ EM  K IS  +  Y+++I   C  GKL EA  +   M   ++ P V IY +LV 
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
              ++G   +A ++   +V   LKP+ 
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNV 308



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 3/270 (1%)

Query: 79  DMLDRIHGKRC---SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           D L + H   C   +P +I    ++    + +     + L +R+  K +  D    ++++
Sbjct: 46  DALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILI 105

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +  +  A  V  ++LK G+  ++   TT I   C  G++++A     ++   G +
Sbjct: 106 NCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFR 165

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
               ++  LI G  K      ++    ++  R   P+   +N +I  LC+     +A  +
Sbjct: 166 LDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNL 225

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            +    KG S N +TYS +I G+   G++ E L    EM  K+I+P +  Y +L+ +L +
Sbjct: 226 FSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHK 285

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            GK++EA     ++    L P V  Y +L+
Sbjct: 286 EGKVKEAKNVLAVIVKTCLKPNVITYNTLI 315



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 1/191 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++ + + Q+    + +++N+LI  + KS R    W +   M +   + N  T  +L
Sbjct: 352 EEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSL 411

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSP-MVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           I+ LCK GQL   + +++++  +   P M  +N  L   + + +R++    L + +L K 
Sbjct: 412 INGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKG 471

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              +   Y++I+Y   K   L+ A  +  +M   G S N+  +   I A  E G+ ++A 
Sbjct: 472 YHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAE 531

Query: 184 CLMQEMENAGL 194
            L+ EM   GL
Sbjct: 532 KLLCEMIARGL 542


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 11/356 (3%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            +F+ LI  + K+ R       Y  MLE    PN   I  L+++LC+ G +   + +   
Sbjct: 4   FTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF-- 61

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--MIHDTIAYSLIVYAKVKM 141
             G +CSP VI    LI    + + +++ + L   M  KN  ++ +   Y+ I+    KM
Sbjct: 62  -RGIQCSPSVITLNILINGFCELQLLDKALELFHEM-EKNFALVPEATTYTAIIKCYCKM 119

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDET 200
             L+ A  + EE      S++    T+    +C+  +++EA  L+ +M E    KP    
Sbjct: 120 DRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL-- 258
           +N++I G  KA R+ E+    E ++S   +P+   +  +I   C+ GN  +A  +  +  
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
           + D    PN +T++ LI G  K   ++   +L  +M+ + +      YT+L+  LC+ G+
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGR 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             E  + F+ M      P V  Y +LV  H + G+   A  +   MV++G+ P  +
Sbjct: 298 TSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 169/359 (47%), Gaps = 6/359 (1%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT-LISALCKGGQLQTYV 78
           S S+I+ N LI+   +    D    ++  M +N     EAT  T +I   CK  +L    
Sbjct: 67  SPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQAR 126

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML-RKNMIHDTIAYSLIVYA 137
            +L+      CS  VI  TS+     + +R++E   LL  M+ +K+   D +A+++I++ 
Sbjct: 127 QLLE--ESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHG 184

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG--LK 195
             K   +  A  + E ++  G   N+  YTT I  +C+ G + EA  L + + +     +
Sbjct: 185 FCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE 244

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN LI G  KA R+E +    +QM +R L      +  ++  LC+ G   + + +
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
               L +G +P+ +TY+ L+  + K G +Q+  ++   M  K I P +  YT L+  L +
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            GK+  A ++F+ +      P   +Y +LV    +     +A+    EM+   L P  +
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPA 423



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 153/321 (47%), Gaps = 9/321 (2%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   LI+ LCK G+L   V+  +++  + C P +     L+  + Q   +++ M +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYC 174
            + +         I  ++++    +++ L+ AL ++ EM K       +  YT  I  YC
Sbjct: 61  FRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL-PSC 233
           +  ++++A  L++E               +  G  KA+R++E+      M+ +K   P  
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVI--AITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
            A+N +I   C+ G  ++A  ML   +  G  PN +TY+ LI G+ K G + E L+L+  
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 294 MEYKS--ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
           +  +     P +  + +LIS LC+  +LE A +  K MK+  L      Y +L+    ++
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
           G  ++   + EEM+ EG  PS
Sbjct: 296 GRTSEVSRVFEEMLREGCNPS 316



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 129/271 (47%), Gaps = 2/271 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E++     ++++N +IH   K+ R    + + + ++     PN  T  TLI   CK G 
Sbjct: 166 VEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225

Query: 74  LQTYVDMLDRIHGK--RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           L   + +   +  +     P V+   +LI  + + +R+E    L+K+M  +++  DT  Y
Sbjct: 226 LSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++    K         V+EEML+ G + +   YTT + A+C+ G +++A  +++ M  
Sbjct: 286 TTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVA 345

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P   T+ +L+EG  +  ++  +  + E+++  +  P    ++ ++R  C+     +
Sbjct: 346 KGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDE 405

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           A       LD+  +P+  T   L+    K G
Sbjct: 406 AVKYYVEMLDRRLAPDPATCKLLVEMLCKRG 436



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 3/304 (0%)

Query: 20  SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYV 78
           S  +I+  ++     K+ R D  +++   M+E     P+      +I   CK G+++   
Sbjct: 136 SSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAY 195

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--MIHDTIAYSLIVY 136
           +ML+ +    C P  +  T+LI    +   + E + L K +  ++     + + ++ ++ 
Sbjct: 196 EMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALIS 255

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K   LE A  + ++M  R   A++F YTT +   C+ G+  E + + +EM   G  P
Sbjct: 256 GLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNP 315

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  L+    KA  ++++      M+++ + P  + +  ++  L E G  + A    
Sbjct: 316 SVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFF 375

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              L +   P  + YS L+ G  K   + E +K Y EM  + ++P       L+  LC+ 
Sbjct: 376 EKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435

Query: 317 GKLE 320
           G+ +
Sbjct: 436 GRTD 439



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 112/243 (46%), Gaps = 2/243 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY--PNEATIRTL 64
           A+++   L   G   + +++ TLI    KS       ++++ +     +  PN  T   L
Sbjct: 194 AYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNAL 253

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           IS LCK  +L+   +++ ++  +         T+L+  + ++ R  E   + + MLR+  
Sbjct: 254 ISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGC 313

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
               + Y+ +V+A  K  +L+ A  V   M+ +G   +   YT  +    E GK+  A  
Sbjct: 314 NPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATE 373

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
             +++      P    ++ L+ GC KA  ++E++ Y  +M+ R+L P  +    ++  LC
Sbjct: 374 FFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLC 433

Query: 245 ECG 247
           + G
Sbjct: 434 KRG 436



 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 78/177 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E AF++ + ++ R       ++ TL+  + K  R   V R+++ ML     P+  T  T
Sbjct: 263 LEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTT 322

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+ A CK G LQ    ++  +  K   P V   T L+  + +  ++       +++LR+ 
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
                + YS +V    K   ++ A+  Y EML R  + +       +   C+ G+ +
Sbjct: 383 CPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 151/317 (47%), Gaps = 1/317 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   +I A+C+ G +    ++L+ +  + C P  +   +++  +   ER  +   L
Sbjct: 14  PNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEEL 73

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M+R+N   +    ++IV    +   L+      E+M K G +AN   Y   I   CE
Sbjct: 74  LDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCE 133

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G ++ A  L+  M++ G KP   T+N L++G   A + E++     +M     LP    
Sbjct: 134 QGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVT 193

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN +I  LC+ G   QA  +     +KG +PN  TYS +IGG AK G++++ L+L  EM 
Sbjct: 194 FNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMA 253

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K  + T   Y  L  SL +  K+EE  +    ++   + P   ++ +++ +    G   
Sbjct: 254 SKGYN-TDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTD 312

Query: 356 KALHLCEEMVSEGLKPS 372
            A+ +  +MVS G  P 
Sbjct: 313 YAIDVLADMVSYGCMPD 329



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 132/266 (49%), Gaps = 1/266 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           + N +++ +++      V R  + M ++    N  T   +IS +C+ G + + +++L  +
Sbjct: 88  TVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNM 147

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C P ++   +L+  +   ++ E+   L+ +M + + + D + ++ I+    +   +
Sbjct: 148 QSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLI 207

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  V+++M ++G + NS  Y+T IG   + GK+E+A  L+ EM + G    D+ + LL
Sbjct: 208 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNT-DKMYQLL 266

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
            E   K  +IEE +    ++    + P    FN ++  LC  G    A  +L   +  G 
Sbjct: 267 TESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGC 326

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKL 290
            P+E+TY  LI G + EG +QE  +L
Sbjct: 327 MPDELTYIILIEGLSYEGYLQEAREL 352



 Score = 90.9 bits (224), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 117/263 (44%)

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           M L+  M  +    + + Y++I+ A  +  +++ A  +   +  RG   N+  Y T +  
Sbjct: 1   MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C   +  +A  L+ EM      P + T N+++   ++   +++   Y E+M       +
Sbjct: 61  LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +N +I  +CE G+   A  +L+     G  P+ +TY+ L+ G     + ++  +L  
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMI 180

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +M      P    + ++IS LCQ G + +A + FK M      P    Y +++G   + G
Sbjct: 181 KMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAG 240

Query: 353 NKAKALHLCEEMVSEGLKPSTSY 375
              +AL L  EM S+G      Y
Sbjct: 241 KMEQALELLNEMASKGYNTDKMY 263



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/320 (20%), Positives = 138/320 (43%), Gaps = 9/320 (2%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   L  RG   + +++NT++  +   +R      +   M+     PNEAT+  +++
Sbjct: 35  ARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVN 94

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L + G LQ     L+++    C+  V+   ++I  + ++  ++  + LL  M       
Sbjct: 95  TLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKP 154

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ ++         E A  +  +M +     ++  + T I   C+ G I +A  + 
Sbjct: 155 DIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVF 214

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           ++M   G  P   T++ +I G AKA ++E++L    +M S+         ++M + L E 
Sbjct: 215 KQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGY-----NTDKMYQLLTES 269

Query: 247 GNAKQANGMLTLAL----DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
            N +     +   +    D G SP  + ++ ++    + G+    + +  +M      P 
Sbjct: 270 LNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPD 329

Query: 303 LPAYTSLISSLCQCGKLEEA 322
              Y  LI  L   G L+EA
Sbjct: 330 ELTYIILIEGLSYEGYLQEA 349



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 114/237 (48%), Gaps = 1/237 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A ++   ++  G    ++++NTL+  +  +D+ +    +   M +N   P+  T  T
Sbjct: 137 VDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNT 196

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +IS LC+ G +    ++  ++  K C+P     +++I  + +  ++E+ + LL  M  K 
Sbjct: 197 IISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKG 256

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y L+  +  K   +E  + V  ++   G S  + ++ T +   C  GK + A 
Sbjct: 257 YNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAI 315

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            ++ +M + G  P + T+ +LIEG +    ++E+     ++ SR +L +    NE +
Sbjct: 316 DVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKNEAL 372


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 163/361 (45%), Gaps = 2/361 (0%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG     +++N++I    K  R D     ++ M +    P+  T   LI+  CK G+L  
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            ++    + G    P V+  ++L+    +E  +++ +     M R  ++ +   Y+ ++ 
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 278

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K+ NL  A  +  EML+ G   N   YT  I   C+  +++EA  L  +M+ AG+ P
Sbjct: 279 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 338

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              ++N LI G  KAK ++ +L    ++  R + P    +   I  LC     + A  ++
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 398

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               + G   N + Y+ L+  Y K G   E L L  EM+   I  T+  +  LI  LC+ 
Sbjct: 399 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 458

Query: 317 GKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TS 374
             + +A  YF +I     L     I+ +++    +      A  L E+MV +GL P  T+
Sbjct: 459 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 518

Query: 375 Y 375
           Y
Sbjct: 519 Y 519



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 148/340 (43%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S N L+H   K  + D V R ++ M+     P   T   +I  +CK G ++    + + +
Sbjct: 97  SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 156

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P  +   S+I    +  R+++ +   + M       D I Y+ ++    K   L
Sbjct: 157 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 216

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
              L  Y EM   G   N   Y+T + A+C+ G +++A     +M   GL P + T+  L
Sbjct: 217 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 276

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+   K   + ++     +M+   +  +   +  +I  LC+    K+A  +       G 
Sbjct: 277 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 336

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN  +Y+ LI G+ K   +   L+L  E++ + I P L  Y + I  LC   K+E A  
Sbjct: 337 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 396

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
               MK   +     IY +L+  + + GN  + LHL +EM
Sbjct: 397 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 172/391 (43%), Gaps = 36/391 (9%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +  +  R ++  G   +++S++TL+    K        + Y  M      PNE T  +LI
Sbjct: 218 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 277

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A CK G L     + + +        V+  T+LI  +   ER++E   L  +M    +I
Sbjct: 278 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 337

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +  +Y+ +++  VK +N++ AL +  E+  RG   +  +Y TFI   C   KIE A  +
Sbjct: 338 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397

Query: 186 MQEMENAGLKP------------------------YDE-----------TFNLLIEGCAK 210
           M EM+  G+K                          DE           TF +LI+G  K
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 457

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSA-FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
            K + +++ Y  ++ +   L + +A F  MI  LC+    + A  +    + KG  P+  
Sbjct: 458 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 517

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
            Y+ L+ G  K+G + E L L  +M    +   L AYTSL+  L  C +L++A  + + M
Sbjct: 518 AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
               + P   +  S++  H E G   +A+ L
Sbjct: 578 IGEGIHPDEVLCISVLKKHYELGCIDEAVEL 608



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 156/343 (45%), Gaps = 7/343 (2%)

Query: 32  VVTKSDRN--DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRC 89
           V++K+D +  D++W        N+  P       L S L   G L+  +    ++   R 
Sbjct: 37  VLSKADCDVFDVLWST-----RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 91

Query: 90  SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
            P       L+ R  +  + ++     K M+          Y++++    K  ++E+A  
Sbjct: 92  FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 151

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           ++EEM  RG   ++  Y + I  + + G++++  C  +EM++   +P   T+N LI    
Sbjct: 152 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 211

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           K  ++   L +  +M    L P+  +++ ++   C+ G  +QA          G  PNE 
Sbjct: 212 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 271

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY+ LI    K G + +  +L  EM    +   +  YT+LI  LC   +++EA++ F  M
Sbjct: 272 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 331

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  ++P +  Y +L+   ++  N  +AL L  E+   G+KP 
Sbjct: 332 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 374



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           GF   +  +S LI      G ++E ++ + +M+   + P   +   L+    + GK ++ 
Sbjct: 59  GFGVFDALFSVLI----DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++FK M      P V  Y  ++    ++G+   A  L EEM   GL P T
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 165


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 4/328 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDM 80
           SL+++N LI+    +        ++Q M    R  P+  T  TLIS LC  G  +    +
Sbjct: 44  SLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKL 103

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L  +  K  +  V   +S+I  +++E + EE   +L+ M+      D  A++ ++    +
Sbjct: 104 LSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFAR 163

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE--MENAGLKPYD 198
             N+E A  VY+ M++ G+  ++  Y   I    + GK++E+  ++ E  M  AG  P  
Sbjct: 164 SNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNV 223

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            TF+ LI G  +   +E++L     M+     P+   +  +I  LC      QA  +   
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLISSLCQCG 317
                  P+ + Y+ LI GY K G + E  KLY EM   + + PT+  + +LI   C+ G
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLV 345
           KL  A++    M +  L      Y  L+
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILI 371



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 9/302 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRY-PNEATIR 62
           E A +V +++ + G+    +S++ LIH + K  + D   +I   M +    Y PN  T  
Sbjct: 168 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFS 227

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI  LC+ G+L+  +++   +    C P     T+LI  + + E++ +   L ++M + 
Sbjct: 228 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEE 181
            +  D +AY+ ++    K  +++ A  +Y EM    G       + T I  +C+ GK+  
Sbjct: 288 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 347

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL--P-SCSAFNE 238
           AN L+ EM   GL     T+ +LI G ++A +++E+L   +QM  +K L  P SC +F  
Sbjct: 348 ANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF-- 405

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
            +  LC+ GN  QA  +       G  PN  T+  L     K G +++  KL    + + 
Sbjct: 406 -VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 464

Query: 299 IS 300
           I+
Sbjct: 465 IT 466



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 153/350 (43%), Gaps = 35/350 (10%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +++ ++  + K+        +++ M      P+  T   LI++ C  G+    +D+   +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 85  -HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
              KR  P      +LI  +      E    LL  M  KN+  +   YS I+ + VK   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
            E +  V EEM+  G + + F +   +  +     +E+A  + Q M  +G KP + ++++
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G AK  +++ESL    +M  R                                   G
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRA---------------------------------AG 218

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
           + PN IT+S LI G  + GE+++ L+++  M      P    YT+LI+ LC+  K+ +A 
Sbjct: 219 YVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQAR 278

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV-SEGLKPS 372
           + F+ M    + P    Y SL+  + ++G+  +A  L  EM    GL+P+
Sbjct: 279 ELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 328



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 142/341 (41%), Gaps = 34/341 (9%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E ++ V   +   G +  + +FN ++    +S+  +    +YQHM+E+   P+  +   L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  L K G+L   + +L  +                                  M     
Sbjct: 193 IHGLAKIGKLDESLKILSEMA---------------------------------MRAAGY 219

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + + I +S +++   +   LE AL V+  ML+ G   N + YTT I   C   K+ +A  
Sbjct: 220 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARE 279

Query: 185 LMQEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           L ++M  A + P    +N LI G C +    E    Y E      L P+   FN +I   
Sbjct: 280 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +AN ++     KG + +  TY  LI G ++  ++ E L++Y +M  K      
Sbjct: 340 CKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 399

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +  S +  LC+ G +++A   F+  +    VP  + +  L
Sbjct: 400 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 440



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 116/282 (41%), Gaps = 38/282 (13%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEM----------------------------------L 155
           AY  +V +  K   L  AL V+E M                                  +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 156 KR--GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           KR      + + Y T I   C  G  E A  L+ EM +  +     T++ +I+   K  +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
            EES    E+MM+    P   AFN +++      N ++A  +    ++ G+ P+ ++Y  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSIS--PTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
           LI G AK G++ E LK+  EM  ++    P +  +++LI  LC+ G+LE+A + F  M  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 332 HSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
               P    Y +L+          +A  L E+M    + P  
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDA 293



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 1/175 (0%)

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-T 257
           + ++ +++  AKA  + ++L   E M S   +PS   +N +I   C  G   +A  +  +
Sbjct: 11  DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           +  +K   P+  TY+ LI G    G  +   KL  EM  K+I+  +  Y+S+I SL +  
Sbjct: 71  MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           K EE+ K  + M +    P V  +  ++       N  KA  + + MV  G KP 
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 1/317 (0%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           + AT   ++ A C+ G+ +    +  R+      P V+  T+ +  + +   +++   +L
Sbjct: 215 DSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVL 274

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FSANSFVYTTFIGAYCE 175
           + M+ K +  +   ++ ++    K+   E A  ++ +++K   +  N   YT  IG YC+
Sbjct: 275 EEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK 334

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK+  A  L+  M   GL P   T+  LI+G  +    + +     +M     LP+   
Sbjct: 335 EGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYT 394

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I   C+ G  +QA  +L +A  +G  P+++TY+ LI  + K+G I   L L+ +M 
Sbjct: 395 YNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMA 454

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
             S  P +  YT++I+  CQ  ++E++ + F    S  LVP    Y S++  +   G   
Sbjct: 455 ENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKST 514

Query: 356 KALHLCEEMVSEGLKPS 372
            AL + E MV  G  P 
Sbjct: 515 SALKVFERMVQHGCLPD 531



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 155/369 (42%), Gaps = 36/369 (9%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A  +   + + GFSL   +   ++    +  R   V  ++  M+E    PN      
Sbjct: 197 FEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTA 256

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI----------------LRIIQ-- 105
            +  LCK G ++    +L+ + GK   P V  +TSLI                L++++  
Sbjct: 257 WVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSS 316

Query: 106 ------------------EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
                             E ++    +LL RM+ + +  +T  Y+ ++    +  + + A
Sbjct: 317 SYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRA 376

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             +  +M   GF  N + Y   IG +C+ GKI++A  +++   + GL P   T+ +LI  
Sbjct: 377 FELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITE 436

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             K   I  +L    QM      P    +  +I   C+    +Q+  +    L  G  P 
Sbjct: 437 HCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPT 496

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
           + TY+ +I GY + G+    LK++  M      P    Y +LIS LC+  +LEEA   F+
Sbjct: 497 KQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFE 556

Query: 328 IMKSHSLVP 336
            M    +VP
Sbjct: 557 TMLDKHMVP 565



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 155/331 (46%), Gaps = 3/331 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  + R L+   C+ G+ +    +L  +  +  S      T ++    ++ R  +   L
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGL 238

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
             RM+      + + Y+  V    K   ++ A  V EEM+ +G   N + +T+ I   C+
Sbjct: 239 FGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298

Query: 176 YGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
            G  E A    ++ ++++  KP   T+ ++I G  K  ++  +     +M+ + L P+ +
Sbjct: 299 IGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +  +I   C  G+  +A  ++     +GF PN  TY+ +IGG+ K+G+IQ+  K+    
Sbjct: 359 TYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMA 418

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             + + P    YT LI+  C+ G +  A   F  M  +S  P +D Y +++ ++ ++   
Sbjct: 419 TSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQM 478

Query: 355 AKALHLCEEMVSEGLKPSTSYLCS--ASTCR 383
            ++  L ++ +S GL P+     S  A  CR
Sbjct: 479 EQSQQLFDKCLSIGLVPTKQTYTSMIAGYCR 509



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 3/201 (1%)

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           Q  +  G++P   +F  L+ GC +  R EE+ +    M         +    ++R  C  
Sbjct: 170 QAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQ 229

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  +   G+    ++ G  PN + Y+  + G  K G +++   +  EM  K + P +  +
Sbjct: 230 GRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTH 289

Query: 307 TSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           TSLI  LC+ G  E A + F K++KS S  P V  Y  ++G + ++G  A+A  L   MV
Sbjct: 290 TSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMV 349

Query: 366 SEGLKPSTSYLCS--ASTCRG 384
            +GL P+T+   +     CRG
Sbjct: 350 EQGLAPNTNTYTTLIDGHCRG 370



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 11/290 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ AF++   ++  GF  ++ ++N +I    K  +    +++ +        P++ T   
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTM 432

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  CK G +   +D+ +++    C P +   T++I    Q+ ++E+   L  + L   
Sbjct: 433 LITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++     Y+ ++    ++    SAL V+E M++ G   +   Y   I   C+  ++EEA 
Sbjct: 493 LVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEAR 552

Query: 184 CLMQEMENAGLKPYDET-FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            L + M +  + P D T   L  E C + K    ++S+ + +  R+      A + ++R+
Sbjct: 553 ALFETMLDKHMVPCDVTCVTLAYEYCRRDK-TTIAVSFLDGLDKRQ---QAHAADALVRK 608

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG------YAKEGEIQE 286
           L    N   A+  L   LDK ++ +  TY+  I        YA   EI E
Sbjct: 609 LSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISE 658



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 105/222 (47%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M+E    PN  T  TLI   C+GG      ++++++  +   P +    ++I    ++ +
Sbjct: 348 MVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGK 407

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I++   +L+    + +  D + Y++++    K  ++  AL ++ +M +     +   YTT
Sbjct: 408 IQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTT 467

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  YC+  ++E++  L  +  + GL P  +T+  +I G  +  +   +L   E+M+   
Sbjct: 468 IIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHG 527

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
            LP    +  +I  LC+    ++A  +    LDK   P ++T
Sbjct: 528 CLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVT 569


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 5/367 (1%)

Query: 8   FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           F++ R     G   SL+ +N L++ + + ++ D     ++  +      +  +   LI  
Sbjct: 188 FNIARTWVD-GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRG 246

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-MIH 126
           LC+ G++    ++ + + G  CSP VI   +LI    +   ++ G  LLK +L KN +  
Sbjct: 247 LCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSP 306

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y+ I+    K+  +E A +++  M+  G   N+F +   I  + + G +  A  + 
Sbjct: 307 DVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMY 366

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM   G  P   TF  LI+G  +  ++E SL    ++ +R L P+   F  +   LC+ 
Sbjct: 367 EEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKE 426

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A G L     +        Y+ +I G+ K G + E   +  EME K   P    Y
Sbjct: 427 NRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITY 486

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG--NKA-KALHLCEE 363
           T LI   C  G+L EA   F  M      P      SL+   L+ G  N+A + + +  E
Sbjct: 487 TILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASE 546

Query: 364 MVSEGLK 370
             + GLK
Sbjct: 547 DFNLGLK 553



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/385 (21%), Positives = 182/385 (47%), Gaps = 26/385 (6%)

Query: 6   VAFDVCRYLEQ-----RGFSLSLISFNT---------LIHVVTKSDRNDLVWRIYQHMLE 51
           +AF+V R L       + F LS ++ N          L+  +++   ++    +Y  M  
Sbjct: 106 IAFEVVRGLNNPELALKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNI 165

Query: 52  NIRYPNEATIRTLISALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           +   P+ + +  L+S+    G+    +T+VD ++          ++V   L+ ++++  +
Sbjct: 166 DGHSPDASVLGFLVSSATDAGKFNIARTWVDGVEF--------SLVVYNKLLNQLVRGNQ 217

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           ++E +   +  +  +   D+ ++++++    ++  ++ A  ++ EM   G S +   Y T
Sbjct: 218 VDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNT 277

Query: 169 FIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
            I  +C   +++  + L++E+     L P   T+  +I G  K  ++E++      M+S 
Sbjct: 278 LINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISS 337

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            + P+   FN +I    + G+   A  M    L  G  P+ IT++ LI G+ + G+++  
Sbjct: 338 GIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERS 397

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           LKL++E+  +++SP    +  L ++LC+  +L EA  + + +K   +V    +Y  ++  
Sbjct: 398 LKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDG 457

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPS 372
             + GN  +A  +  EM  +  KP 
Sbjct: 458 FCKAGNVDEANVILAEMEEKRCKPD 482


>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 4/370 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  + R + + G S + +S+NTLI  +   +  D    ++  + +    PN  T   
Sbjct: 170 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNI 229

Query: 64  LISALCKGGQL-QTYVDMLDRI--HGKRCSPMVIVNTSLIL-RIIQEERIEEGMVLLKRM 119
           ++ ALC+ G +      +L+ I    +  +P+ IV  ++++    +   + + + + K M
Sbjct: 230 IVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEM 289

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
            +KN+  D++ Y++I+       N+ +A     +M+KRG + + F Y T I A C+ GK 
Sbjct: 290 SQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKF 349

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           + A  L   M+N G+ P   ++ ++I+G      ++ +  + + M+ R LLP    +N +
Sbjct: 350 DVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVV 409

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I      G+   A  +L L L  G  PN  T + LI GY K G + +   +  EM    I
Sbjct: 410 IDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI 469

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y  L+ + C  G L  A + +  M      P +  Y  LV     KG   +A  
Sbjct: 470 HPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAES 529

Query: 360 LCEEMVSEGL 369
           L   M   G+
Sbjct: 530 LLSRMQVSGI 539



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 158/328 (48%), Gaps = 5/328 (1%)

Query: 51  ENIRYPNEATIRT-LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI 109
           +N  Y +  +I + ++  LC  G++   + + +++      P +I++  L+  + +   I
Sbjct: 111 KNFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYI 170

Query: 110 EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTF 169
           E+   L++ M       + ++Y+ ++     + N++ AL ++  + K G   N       
Sbjct: 171 EKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNII 230

Query: 170 IGAYCEYGKIEEANC-LMQEMENAGL--KPYD-ETFNLLIEGCAKAKRIEESLSYCEQMM 225
           + A C+ G I   N  L++E+ ++     P D  T  +L++ C K   + ++L   ++M 
Sbjct: 231 VHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMS 290

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
            + +      +N +IR LC  GN   A G +   + +G +P+  TY+ LI    K G+  
Sbjct: 291 QKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFD 350

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
               L+  M+   ++P   +Y  +I  LC  G ++ A+++ + M   SL+P V ++  ++
Sbjct: 351 VACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVI 410

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
             +   G+ + AL +   M+S G+KP+ 
Sbjct: 411 DGYGRYGDTSCALSVLNLMLSYGVKPNV 438



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 123/285 (43%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +V + + Q+      + +N +I  +  S      +     M++    P+  T  TLIS
Sbjct: 282 ALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 341

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G+     D+   +     +P  I    +I  +  +  ++     L+ ML+++++ 
Sbjct: 342 ALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLP 401

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + +++++    +  +   AL V   ML  G   N +     I  Y + G++ +A  + 
Sbjct: 402 EVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVK 461

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM +  + P   T+NLL+        +  +    ++M+ R   P    + E++R LC  
Sbjct: 462 NEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWK 521

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           G  K+A  +L+     G + + + +  L+  Y +     E   +Y
Sbjct: 522 GRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLVY 566



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 3/235 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+VA D+   ++  G +   IS+  +I  +      D      Q ML+    P       
Sbjct: 349 FDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNV 408

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I    + G     + +L+ +      P V  N +LI   ++  R+ +    +K  +R  
Sbjct: 409 VIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAW-WVKNEMRST 467

Query: 124 MIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            IH DT  Y+L+V A   + +L  A  +Y+EMLKRG   +   YT  +   C  G+++EA
Sbjct: 468 KIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEA 527

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES-LSYCEQMMSRKLLPSCSAF 236
             L+  M+ +G+      F +L++   + +R +E+ L Y + +++R    SC + 
Sbjct: 528 ESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLVYKKWLVTRNGGVSCPSI 582


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 149/319 (46%), Gaps = 2/319 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN  T   L  A C+ G +     ++ R+  +  +P VI   ++I  + +  R+   +  
Sbjct: 238 PNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEF 297

Query: 116 L--KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
              KR +      + + YS +  A +   N++ A+ ++ EM   G   ++ +Y T I   
Sbjct: 298 FREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGL 357

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
            + G++ +A      M+ AG K   + +N+LI G  + K++ E+    E+M    L P  
Sbjct: 358 TQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDV 417

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             +N ++  LC+ G+    + +L   +D G  P+ +T+  L+ GY K G+  E L+++  
Sbjct: 418 YTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRS 477

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   I P    Y +LI  LC+  +++ A K F  M+  ++   V  Y +L+    +K  
Sbjct: 478 MDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKM 537

Query: 354 KAKALHLCEEMVSEGLKPS 372
             KA  L + M  E   P+
Sbjct: 538 AEKAFELMDRMREERCTPN 556



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/356 (20%), Positives = 150/356 (42%), Gaps = 10/356 (2%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN+L+  + ++     +  ++  M +    P+  T   L++ LCK G +   + +LDR+ 
Sbjct: 134 FNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMS 193

Query: 86  --GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH----DTIAYSLIVYAKV 139
             G    P + +  +++  + +  R+++ ++ +   +R   +H    + + Y+ +  A  
Sbjct: 194 SPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH--VHGCAPNAVTYNCLADAFC 251

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           ++ ++  A  +   M K G + N     T IG  C  G++  A    +E      +    
Sbjct: 252 RVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGN 311

Query: 200 --TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ L         ++ ++    +M      P    +  MI  L + G    A     
Sbjct: 312 AVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAA 371

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
                GF  +   Y+ LIGG+ ++ ++ E  +L  EM+   + P +  Y +L+S LC+ G
Sbjct: 372 SMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAG 431

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                D+    M      P V  + +LV  + + G   +AL +   M    ++P+T
Sbjct: 432 DFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNT 487



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 10/313 (3%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP----NEATIRTLISALC 69
           +E+ G + ++I+ NT+I  + +  R       ++   +   +P    N  T  TL SA  
Sbjct: 266 MEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLASAFL 323

Query: 70  KGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
               +   +++   +  HG R  P  ++  ++I  + Q  R+ +       M +     D
Sbjct: 324 HCNNVDMAMELFHEMADHGHR--PDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLD 381

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQ 187
             AY++++    + + L  A  + EEM   G   + + Y T +   C+ G     + L+ 
Sbjct: 382 AKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLG 441

Query: 188 EMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
            M + G +P   TF  L+ G  KA + +E+L     M   ++ P+   +N +I  LC+  
Sbjct: 442 HMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSR 501

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
               A  +     +K    N  TY+ L+ G   +   ++  +L   M  +  +P      
Sbjct: 502 EVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVD 561

Query: 308 SLISSLCQCGKLE 320
            L+  L + G+ E
Sbjct: 562 VLMEWLPEIGETE 574



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/275 (18%), Positives = 122/275 (44%), Gaps = 3/275 (1%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           + E RG   + ++++TL       +  D+   ++  M ++   P+     T+IS L + G
Sbjct: 305 WPEARG---NAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAG 361

Query: 73  QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +L         +              LI    +++++ E   LL+ M    +  D   Y+
Sbjct: 362 RLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYN 421

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            ++    K  +  +   +   M+  G   +   + T +  YC+ GK +EA  + + M+ A
Sbjct: 422 TLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEA 481

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            ++P    +N LI+   K++ ++ ++   ++M  + +  + + +N +++ L +   A++A
Sbjct: 482 RIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKA 541

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
             ++    ++  +PN +T   L+    + GE + +
Sbjct: 542 FELMDRMREERCTPNYVTVDVLMEWLPEIGETERL 576



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 4/155 (2%)

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           + + S    P  S FN ++  L   GN +    + T   D    P+ +TY  L+ G  K 
Sbjct: 120 DSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKS 179

Query: 282 GEIQEVLKLYYEMEY--KSISPTLPAYTSLISSLCQCGKLEEADKYF--KIMKSHSLVPG 337
           G + + LK+   M      + P +    +++  LC+ G+L++A  +   ++   H   P 
Sbjct: 180 GHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPN 239

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              Y  L       G+   A  +   M  EG+ P+
Sbjct: 240 AVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPN 274



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/185 (18%), Positives = 78/185 (42%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   ++  G    + ++NTL+  + K+     V  +  HM+++   P+  T  TL+ 
Sbjct: 401 AYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVH 460

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+    + +   +   R  P  ++  +LI  + +   ++  + L   M  KN+  
Sbjct: 461 GYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPA 520

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y+ ++      +  E A  + + M +   + N       +    E G+ E   C M
Sbjct: 521 NVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFM 580

Query: 187 QEMEN 191
           Q+ + 
Sbjct: 581 QQRDQ 585



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 2/117 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F    ++  ++   G   S+++F TL+H   K+ + D   RI++ M E    PN     T
Sbjct: 433 FSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNT 492

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI-EEGMVLLKRM 119
           LI  LCK  ++   + + D +  K   P  +   + +L+ +Q++++ E+   L+ RM
Sbjct: 493 LIDFLCKSREVDVAIKLFDEMREKNV-PANVTTYNALLKGLQDKKMAEKAFELMDRM 548


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 176/390 (45%), Gaps = 42/390 (10%)

Query: 22  SLISFNTLIHVVTK---SDRNDLVWRIYQHMLENIR---YPNEATIRTLISALCKGGQLQ 75
           S+ +FN L+ VV++   S  ++ V  ++  M         PN  T   LI   C+ G+L+
Sbjct: 48  SVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLE 107

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-VLLKRMLRKNMIHDTIAYSLI 134
                   I        VIV + L+  +   +R++E   +LL RM       D +AY+ +
Sbjct: 108 HGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTV 167

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    +   +E A  ++ EM+ +G   N   YTT I   C+   ++ A  + Q+M + G+
Sbjct: 168 INGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGV 227

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA-- 252
           KP + T+N LI G     + +E +   E+M +  L P C  +  ++  LC+ G  ++A  
Sbjct: 228 KPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARL 287

Query: 253 ---------------------------------NGMLTLALDKGFSPNEITYSHLIGGYA 279
                                            +  L L +  G SPN   ++ +   YA
Sbjct: 288 FFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYA 347

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K+  I+E + ++ +M  + +SP + ++ +LI +LC+ G++++A   F  M +  + P + 
Sbjct: 348 KKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIF 407

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           ++ SLV      G   KA  L  E++ +G+
Sbjct: 408 VFSSLVYGLCTVGKWEKAEELFFEVLDQGI 437



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 165/367 (44%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A+++   +  +G   +++++ T+I  + K+   D    ++Q M++    P+  T   L
Sbjct: 178 EKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCL 237

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I      G+ +  V ML+ +      P  I    L+  + +  R  E  +    M RK +
Sbjct: 238 IHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGI 297

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D   Y+++++       L       + M+  G S N  ++     AY +   IEEA  
Sbjct: 298 KPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMH 357

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +  +M   GL P   +F  LI+   K  R+++++    QM++  + P+   F+ ++  LC
Sbjct: 358 IFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLC 417

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G  ++A  +    LD+G   + + ++ L+     EG + E  +L   M    + P + 
Sbjct: 418 TVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVI 477

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +Y +L++  C  G+++EA K   +M S+ L P    Y  L+  + +      A  L  EM
Sbjct: 478 SYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM 537

Query: 365 VSEGLKP 371
           + +G+ P
Sbjct: 538 LMKGVTP 544



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 163/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G    ++++NT+I+   +  + +  + ++  M++    PN  T  T+I  LCK   
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +  ++  +   P       LI   +   + +E + +L+ M    +  D I Y+L
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K      A + ++ M ++G   +  +Y   +  Y   G + E +  +  M   G
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P    FN++    AK   IEE++    +M  + L P   +F  +I  LC+ G    A 
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 +++G +PN   +S L+ G    G+ ++  +L++E+  + I      + +L+ +L
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNL 451

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G++ EA +   +M    + P V  Y +LV  H   G   +A  L + MVS GLKP+
Sbjct: 452 CNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 149/329 (45%), Gaps = 4/329 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +   G     I++  L+  + K+ R       +  M      P+ A    L+      G 
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L      LD + G   SP   +   +     ++  IEE M +  +M ++ +  D +++  
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K+  ++ A++ + +M+  G + N FV+++ +   C  GK E+A  L  E+ + G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +      FN L+       R+ E+    + M+   + P+  ++N ++   C  G   +A 
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L + +  G  PNE TY+ L+ GY K   + +   L+ EM  K ++P +  Y +++  L
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGL 556

Query: 314 CQCGKLEEADK-YFKIMKSHSLVPGVDIY 341
            Q G+  EA++ Y  ++ S +     DIY
Sbjct: 557 FQTGRFSEANELYLNMINSRT---KCDIY 582



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 158/359 (44%), Gaps = 8/359 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           + E A  +   + Q+G S  ++SF  LI  + K  R D     +  M+     PN     
Sbjct: 351 MIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFS 410

Query: 63  TLISALCKGGQLQT----YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
           +L+  LC  G+ +     + ++LD+     C   V  NT L+  +  E R+ E   L+  
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLDQ---GICVDAVFFNT-LMCNLCNEGRVMEAQRLIDL 466

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M+R  +  + I+Y+ +V        ++ A  + + M+  G   N F YT  +  YC+  +
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           +++A  L +EM   G+ P   T+N ++ G  +  R  E+      M++ +       +N 
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           ++  LC+     +A  M      K    + +T++ +IG   K G  ++ + L+  +    
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYG 646

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
           + P +  Y  +  +L + G L E D  F  M+     P   +  +LV   L +G+ ++A
Sbjct: 647 LVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 162/351 (46%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN +     K    +    I+  M +    P+  +   LI ALCK G++   V   +++ 
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +  +P + V +SL+  +    + E+   L   +L + +  D + ++ ++        + 
Sbjct: 399 NEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVM 458

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  + + M++ G   N   Y T +  +C  G+I+EA  L+  M + GLKP + T+ +L+
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILL 518

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  KA+R++++ S   +M+ + + P  + +N ++  L + G   +AN +    ++    
Sbjct: 519 RGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTK 578

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            +  TY+ ++ G  K   + E  K++  +  K        +  +I +L + G+ E+A   
Sbjct: 579 CDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDL 638

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           F  + ++ LVP V  Y  +    +E+G+  +   L   M   G  P++  L
Sbjct: 639 FATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHML 689



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 150/327 (45%), Gaps = 4/327 (1%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M+ N   PN      +  A  K   ++  + + +++  +  SP V+   +LI  + +  R
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           +++ ++   +M+ + +  +   +S +VY    +   E A  ++ E+L +G   ++  + T
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            +   C  G++ EA  L+  M   G++P   ++N L+ G     RI+E+    + M+S  
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
           L P+   +  ++R  C+      A  +    L KG +P   TY+ ++ G  + G   E  
Sbjct: 507 LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEAN 566

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD--IYESLVG 346
           +LY  M        +  Y  +++ LC+   ++EA K F+ + S    P +D   +  ++G
Sbjct: 567 ELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKD--PQLDSVTFNIMIG 624

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
             L+ G K  A+ L   + + GL P  
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDV 651



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 1/216 (0%)

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           + N+  Y+  IG +C  G++E        +   G +      + L++G   AKR++E+  
Sbjct: 87  APNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATD 146

Query: 220 YCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
                MS     P   A+N +I      G  ++A  +    +D+G  PN +TY+ +I G 
Sbjct: 147 ILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL 206

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            K   +     ++ +M  + + P    Y  LI      GK +E  +  + M +H L P  
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             Y  L+    + G   +A    + M  +G+KP  +
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVA 302



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 1/268 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++IS+NTL+     + R D   ++   M+ N   PNE T   L+   CK  ++   
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDA 530

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +   +  K  +P+V    +++  + Q  R  E   L   M+      D   Y++I+  
Sbjct: 531 YSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNG 590

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A  ++  +  +    +S  +   IGA  + G+ E+A  L   +   GL P 
Sbjct: 591 LCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPD 650

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+ L+ E   +   + E       M      P+    N ++RRL   G+  +A   L 
Sbjct: 651 VVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLY 710

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQ 285
              +K FS    T S LI  Y++ GE Q
Sbjct: 711 KLDEKNFSLEASTTSMLISLYSR-GEYQ 737



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/307 (20%), Positives = 127/307 (41%), Gaps = 4/307 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+ F+V   L+Q G  +  + FNTL+  +    R     R+   M+     PN  +  TL
Sbjct: 427 ELFFEV---LDQ-GICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTL 482

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++  C  G++     +LD +      P     T L+    +  R+++   L + ML K +
Sbjct: 483 VAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGV 542

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
                 Y+ I++   +      A  +Y  M+      + + Y   +   C+   ++EA  
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFK 602

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + + + +   +    TFN++I    K  R E+++     + +  L+P    +  +   L 
Sbjct: 603 MFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLI 662

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E G+  + +G+ +     G +PN    + L+      G+I       Y+++ K+ S    
Sbjct: 663 EEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEAS 722

Query: 305 AYTSLIS 311
             + LIS
Sbjct: 723 TTSMLIS 729



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 38/204 (18%), Positives = 86/204 (42%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A+ + R +  +G +  + ++NT++H + ++ R      +Y +M+ +    +  T 
Sbjct: 525 RRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTY 584

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +++ LCK   +     M  R+  K      +    +I  +++  R E+ M L   +  
Sbjct: 585 NIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISA 644

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ D + Y LI    ++  +L     ++  M K G + NS +    +      G I  
Sbjct: 645 YGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISR 704

Query: 182 ANCLMQEMENAGLKPYDETFNLLI 205
           A   + +++         T ++LI
Sbjct: 705 AGVYLYKLDEKNFSLEASTTSMLI 728


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 152/306 (49%), Gaps = 3/306 (0%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           FS +LIS+  +I  + KS + D    +++ M++   YP+  T   LI  L K  +++   
Sbjct: 201 FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAY 260

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYA 137
           D+ +    K C P V+   ++I  + +  RIE  + L   M+R+ ++  D   YS ++  
Sbjct: 261 DLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING 320

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL-KP 196
                  E A  +YEEML  G S +   Y T +   C+ G  ++A  + ++M    +  P
Sbjct: 321 LNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDP 380

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +LI+   K  R+ +++   ++M  R LLP    F  +I++LC+     +A+ + 
Sbjct: 381 NVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF 440

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
             ++ K   P+ + ++ ++ GY K   I +  KL+  M     +PTL  YT+L++  C+ 
Sbjct: 441 E-SIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRT 499

Query: 317 GKLEEA 322
           G+  +A
Sbjct: 500 GRYSDA 505



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 186/406 (45%), Gaps = 43/406 (10%)

Query: 6   VAFDVCRYL-EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
            A++V ++  +Q  F+ +  + N L+ V  K+ R +     +Q  ++N+  P+E +  TL
Sbjct: 84  TAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTL 143

Query: 65  ISA----------------------------------LCKGGQLQTYVDMLDRIHGKRCS 90
           ++                                   LC GG++    ++   + G   S
Sbjct: 144 MNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FS 202

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P +I  T +I  + +  ++++ + L K+M+ K +  D + Y  ++    K R ++ A  +
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCA 209
           +EE   +G       Y T I   C+ G+IE A  L  +M     LKP   T++ LI G  
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNE 268
            + R E++    E+M+     P    +N ++  LC+ G   +A  +   + +     PN 
Sbjct: 323 LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNV 382

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           ITY+ LI  + K   + + +KL  EME +S+ P    +T++I  LC+  +++EA + F+ 
Sbjct: 383 ITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFES 442

Query: 329 MKSHSLVPGVDIYESLVGIH--LEKGNKAKALHLCEEMVSEGLKPS 372
           +   +  P   ++ +++  +  + + + AK LH  + M+  G  P+
Sbjct: 443 I-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLH--DRMLDSGCAPT 485



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 50/313 (15%)

Query: 107 ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL-----------ESALVVYEEML 155
           ER+ E  ++L++++      + I  SL +Y  + + +L            +A  V++   
Sbjct: 36  ERLAE--IILRQVVDSKRAGEGIEKSLGLYGDILVPDLVGKVIHRIPDPNTAWEVFQWAG 93

Query: 156 KRG-FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           K+  F+ N F     +  Y +  ++E+A+   Q       +P + ++N L+ G  KA  +
Sbjct: 94  KQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDV 153

Query: 215 EESLSYCEQM---------------------------------MSRKLLPSCSAFNEMIR 241
           +++L+   +M                                 MS    P+  ++  MI 
Sbjct: 154 KKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMID 213

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+     +A  +    +DK   P+ +TY  LI G  K+  ++E   L+ E   K   P
Sbjct: 214 GLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 273

Query: 302 TLPAYTSLISSLCQCGKLEEA-DKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALH 359
           T+  Y ++I  LC+CG++E A   Y  +++   L P +  Y +L+ G++L    + KA  
Sbjct: 274 TVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGE-KAYE 332

Query: 360 LCEEMVSEGLKPS 372
           L EEM+  G  P 
Sbjct: 333 LYEEMLDTGCSPD 345



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 124/267 (46%), Gaps = 3/267 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEAT 60
           R  + A+D+      +G   +++++NT+I  + K  R +    +Y  M+ E    P+  T
Sbjct: 254 RRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFT 313

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ L    + +   ++ + +    CSP V+   +L+  + +    ++ M + ++M 
Sbjct: 314 YSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMG 373

Query: 121 RKNMIH-DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
             N+   + I Y++++    K+  L  A+ + +EM  R    ++  +TT I   C+  +I
Sbjct: 374 VGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRI 433

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA+ L + +     KP    FN ++ G  K  RI+++    ++M+     P+ + +  +
Sbjct: 434 DEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTAL 492

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSP 266
           +   C  G    A  M    ++ GF P
Sbjct: 493 VTGFCRTGRYSDALIMYHEMIEMGFPP 519


>gi|222641578|gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
          Length = 577

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 150/301 (49%), Gaps = 6/301 (1%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L + N ++  + K+     VW ++  ML     P+  T  TLI+A    G +    ++ 
Sbjct: 137 ALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVW 196

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           D++  +R  P V+  T++I  + +E+ I +   L   M    M  +   Y+ ++ +  K 
Sbjct: 197 DQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKR 256

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            N++ ALV Y ++LK G   N  ++TT I   C+  +I EA  +  +M    + P    +
Sbjct: 257 DNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVY 316

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI G  ++   +E+L++ ++++ + L P     + ++R LC+      A    T   +
Sbjct: 317 NSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCD------ALVTCTRMSE 370

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G  P+ +TYS LI G++K GE++  + +Y EM  K + P +  YT+LI    + G ++ 
Sbjct: 371 VGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDA 430

Query: 322 A 322
           A
Sbjct: 431 A 431



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 1/194 (0%)

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM   G+ P   T+N LI  C     + ++    +QM++R++ P+   +  MI  LC
Sbjct: 160 LFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALC 219

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E      A G+     + G  PN  TY+ L+  + K   I+  L  YY++    + P   
Sbjct: 220 EEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDV 279

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            +T+LI  LCQ  ++ EA   F  M  + + P V +Y SL+      G   +AL   +E+
Sbjct: 280 IFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 365 VSEGLKPSTSYLCS 378
           + +GL+P   + CS
Sbjct: 340 IRKGLRPD-EFTCS 352



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 64/288 (22%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           L   ML + M+   + Y+ ++ A     ++  A  V+++M+ R    N   YTT I A C
Sbjct: 160 LFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALC 219

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
           E   I +A  L  EM+ AG++P   T+N L+    K   I+ +L +   ++         
Sbjct: 220 EEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL--------- 270

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
                     +CG                  PN++ ++ LI G  +   I E   ++ +M
Sbjct: 271 ----------KCG----------------LVPNDVIFTTLIDGLCQANRITEAKNIFLDM 304

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFK--------------------------- 327
               ++PT+P Y SLI    + G  +EA  +F+                           
Sbjct: 305 PRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDALVT 364

Query: 328 --IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              M    + P V  Y SL+  H + G    A+ +  EMV++G++P+ 
Sbjct: 365 CTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNV 412



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 37/325 (11%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   +L ++N L+    K D        Y  +L+    PN+    TLI  LC+  +
Sbjct: 234 MKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANR 293

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD------ 127
           +    ++   +     +P V V  SLI    +    +E +   + ++RK +  D      
Sbjct: 294 ITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSI 353

Query: 128 -----------------------TIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
                                   + YS ++    K   +E A+ +Y EM+ +G   N  
Sbjct: 354 VVRGLCDALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVV 413

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES----LSY 220
            YT  I  + + G ++ A  L +EME  G+     T ++L++G  +  R++++    + Y
Sbjct: 414 TYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEY 473

Query: 221 CEQMMSRKLLPSCS---AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
             Q  S K  PS +    +  +I  L   G   +A    +   D G  P+  TY+ +I G
Sbjct: 474 SGQKKSEK-NPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRG 532

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPT 302
               G +   + LY +M    + PT
Sbjct: 533 LCMLGYVLNAMMLYADMVKVGVKPT 557



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
              +L+   ++    +E+LS   ++     LP+C   N ++  L +     +   +    
Sbjct: 108 ALGVLVIALSQMALPDEALSVFGRLRELPALPAC---NAILDGLVKAHMLARVWELFDEM 164

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           L +G  P+ +TY+ LI     +G++ +  +++ +M  + I P +  YT++I +LC+   +
Sbjct: 165 LGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCI 224

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            +A+  F  MK   + P +  Y +L+  H ++ N   AL    +++  GL P+
Sbjct: 225 GDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPN 277



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 77/196 (39%), Gaps = 6/196 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A   C  + + G    ++++++LI   +K+   ++   IY  M+     PN  T   LI 
Sbjct: 361 ALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIH 420

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL------KRML 120
              K G +     +   +  K      I  + L+  + +E R+++ +  +      K+  
Sbjct: 421 GHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSE 480

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +   I +++ Y  ++Y          A   +  M   G   + F YT  I   C  G + 
Sbjct: 481 KNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 540

Query: 181 EANCLMQEMENAGLKP 196
            A  L  +M   G+KP
Sbjct: 541 NAMMLYADMVKVGVKP 556



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 73/160 (45%), Gaps = 6/160 (3%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+A  +   +  +G   +++++  LIH   K+   D  + + + M E   Y N  T+  L
Sbjct: 394 EIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVL 453

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCS---PMV---IVNTSLILRIIQEERIEEGMVLLKR 118
           +  LC+  ++Q  V  +    G++ S   P +   +   +LI  +  + +  E       
Sbjct: 454 VDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSC 513

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           M    M+ D   Y+L++     +  + +A+++Y +M+K G
Sbjct: 514 MRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVG 553


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 176/368 (47%), Gaps = 1/368 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +++ G   +L   NT IH++   +      R  + M+     PN  T   LI 
Sbjct: 300 AMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIK 359

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKNMI 125
             C   Q+   ++++D++  K CSP  +   +++  + +++R+ E   L+K+M     ++
Sbjct: 360 GYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLL 419

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ ++    K  + + AL + +E  K  F  +   Y+  + AYC+ GKI++A  L
Sbjct: 420 PDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKEL 479

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           + EM + G  P   T+  +++G  +  +++++    +QM      P+   +   +  LC 
Sbjct: 480 VSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCR 539

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G + +A  M+ ++ ++ ++PN ITYS ++ G  +EG++ E   +  EM  K   P    
Sbjct: 540 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 599

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
              L+ SLC+ GK  EA++  K   +      V  + +++    +K +   AL L ++M 
Sbjct: 600 INLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 659

Query: 366 SEGLKPST 373
                P T
Sbjct: 660 LCNKHPDT 667



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 164/347 (47%), Gaps = 1/347 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLI 65
           A ++   +  +G S   +S+ T++ ++ +  R + +  + + M  + +  P+  T  +LI
Sbjct: 370 AMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLI 429

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             L K G     +++L      R     +  ++++    +E +I++   L+  M  K   
Sbjct: 430 QMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCD 489

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ ++    ++  L+ A  + ++M K     N+  YTTF+   C  GK  EA  +
Sbjct: 490 PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKM 549

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           M   E     P   T+++++ G  +  ++ E+     +M+ +   P+    N ++  LC 
Sbjct: 550 MNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCR 609

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  ++AN +L   ++KG + N + ++ +I G+ ++ +++  L L  +M   +  P    
Sbjct: 610 DGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVT 669

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           YT+LI +L +  ++EEA +    M    LVP    Y S++  +  KG
Sbjct: 670 YTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKG 716



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 141/317 (44%), Gaps = 2/317 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ +  E+  F +  + ++ ++H   K  +      +   M      P+  T  +++ 
Sbjct: 441 ALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLD 500

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+ G+L     M+ +++   C P  +  T+ +  + +  +  E   ++     +    
Sbjct: 501 GFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTP 560

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I YS++V+   +   L  A  V  EM+ +GF  N       + + C  GK  EAN L+
Sbjct: 561 NAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLL 620

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +E  N G       F  +I G  +   +E +LS  + M      P    +  +I  L + 
Sbjct: 621 KECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKT 680

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A  +    L +G  P+ +TY  +I  Y ++G ++++LKL  +M  KS   T  AY
Sbjct: 681 DRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQT--AY 738

Query: 307 TSLISSLCQCGKLEEAD 323
             +I  LC+ G LEEA+
Sbjct: 739 NLVIEKLCKFGYLEEAN 755



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 147/341 (43%), Gaps = 33/341 (9%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G    ++++ +++    +  + D   ++ Q M ++   PN  T  T ++ LC+ G+   
Sbjct: 486 KGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLE 545

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              M++    +  +P  I  + ++  + +E ++ E   +++ M+ K    + +  +L+V+
Sbjct: 546 ARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVH 605

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           +  +      A  + +E + +G + N   +TT I  +C+   +E A  L+ +M      P
Sbjct: 606 SLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHP 665

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS-----------C------------ 233
              T+  LI+  AK  RIEE+     +M+ + L+PS           C            
Sbjct: 666 DTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLL 725

Query: 234 ----------SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
                     +A+N +I +LC+ G  ++AN +L   L      +  T   L+  Y   G 
Sbjct: 726 KKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGI 785

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
                K+   M  +++ P L     +   L   GKLEEAD+
Sbjct: 786 PMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADR 826



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 124/286 (43%), Gaps = 41/286 (14%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIH---DTIAYSLIVYAKVKMRNLESALVVYEEML 155
           ++L I+ + ++ +G   + R++ +  I    +   + ++ Y++     L  A+ V   M 
Sbjct: 251 VMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAG--RLRDAMKVLTLMQ 308

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           K G   N  +  T I       ++++A    + M   G+ P   T+N LI+G     +++
Sbjct: 309 KAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVD 368

Query: 216 ESLSYCEQMMSR------------------------------------KLLPSCSAFNEM 239
           +++   +QM S+                                    KLLP    +N +
Sbjct: 369 QAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSL 428

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I+ L + G+  +A  +L  A    F  +++ YS ++  Y KEG+IQ+  +L  EM  K  
Sbjct: 429 IQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGC 488

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            P +  YTS++   C+ GKL++A K  + M  H   P    Y + +
Sbjct: 489 DPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFL 534



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 17/257 (6%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           HD+  Y +++    K +  + A  +   M +R        +   + +Y   G++ +A  +
Sbjct: 244 HDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKV 303

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M+ AG++P     N  I        ++++L + E+M+   + P+   +N +I+  C 
Sbjct: 304 LTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCN 363

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLP 304
                QA  ++     KG SP++++Y  ++G   ++  + E+ +L  +M+  S + P   
Sbjct: 364 VHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHV 423

Query: 305 AYTSLISSLCQCGK-------LEEADKY-FKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
            Y SLI  L + G        L+EA+K  FK+ K          Y ++V  + ++G   K
Sbjct: 424 TYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVE--------YSAIVHAYCKEGKIQK 475

Query: 357 ALHLCEEMVSEGLKPST 373
           A  L  EM S+G  P  
Sbjct: 476 AKELVSEMFSKGCDPDV 492



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/282 (19%), Positives = 123/282 (43%), Gaps = 33/282 (11%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           E+  ++ + I+++ ++H + +  + +    + + M+    +PN   I  L+ +LC+ G+ 
Sbjct: 554 EEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKP 613

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           +    +L     K C+  V+  T++I    Q++ +E  + LL  M   N   DT+ Y+ +
Sbjct: 614 REANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTAL 673

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC-------------------- 174
           + A  K   +E A  +  +ML++G   +   Y + I  YC                    
Sbjct: 674 IDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSR 733

Query: 175 -------------EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
                        ++G +EEAN L+ E+     +   +T ++L+E          +    
Sbjct: 734 FQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVA 793

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
            +M +R L+P      ++ +RL   G  ++A+ ++   +++G
Sbjct: 794 CRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERG 835


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 149/305 (48%), Gaps = 3/305 (0%)

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK G+ +  +D+L+  +    SP + V  S I ++  +  + +   + + M    +I D 
Sbjct: 302 CKVGKSEEAMDVLEVFN---LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDC 358

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            +Y+ ++    K++++ +AL    +MLKRG   +   YT  I + C+ G +E A  L Q 
Sbjct: 359 FSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQR 418

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   GL P   ++N L+ G  K   ++++      M S  + P    +N +I  L + G 
Sbjct: 419 MITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGL 478

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +L     +GFSP+ +T++++IGG++ +G  +E   L++ M    + P +   ++
Sbjct: 479 VNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSA 538

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L++  C+   + EA+  F  M    L   V +Y SL+      GN   A HL   M+  G
Sbjct: 539 LLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHG 598

Query: 369 LKPST 373
           + P+ 
Sbjct: 599 IMPNN 603



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 3/315 (0%)

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
           E     L++   K    Q  + ++ ++      P++ V  SL+  +++ E++      LK
Sbjct: 151 ETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLK 210

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M  + +  +    SL +       N+++   +  EM   G   +   YT  I + C+  
Sbjct: 211 EMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMS 270

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
            ++EA  ++ +M   G+     + + +++G  K  + EE++   E      L P+   FN
Sbjct: 271 LLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFN 327

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
             I +LC  GN  +A  +     + G  P+  +Y+ ++ GY K  +I   LK   +M  +
Sbjct: 328 SFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKR 387

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            I P++  YT LI S C+ G +E A+  F+ M +  LVP V  Y +L+  + +KG+  KA
Sbjct: 388 GIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKA 447

Query: 358 LHLCEEMVSEGLKPS 372
             L   M S G+ P 
Sbjct: 448 FELLSMMRSAGVSPD 462



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 150/357 (42%), Gaps = 33/357 (9%)

Query: 55  YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           +P      +L+ AL +  QL    D L  +  +       + +  I     +  I+ G  
Sbjct: 183 FPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWK 242

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           LL  M    +  D +AY++++ +  KM  L+ A  +  +M + G   +S   ++ +  YC
Sbjct: 243 LLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYC 302

Query: 175 EYGKIEEA---------------------------NCL-----MQEMENAGLKPYDETFN 202
           + GK EEA                           N L      Q+M   GL P   ++ 
Sbjct: 303 KVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYT 362

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++ G  K K I  +L Y  +M+ R + PS + +  +I   C+ GN + A  +    + +
Sbjct: 363 TMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITE 422

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G  P+ ++Y+ L+ GY K+G +Q+  +L   M    +SP L  Y  LI  L + G + EA
Sbjct: 423 GLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEA 482

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
                 +      P V  + +++G    KGN  +A  L   M    L+P     CSA
Sbjct: 483 KDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDV-VTCSA 538



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 128/290 (44%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           PN     + IS LC  G +     +   +      P     T+++    + + I   +  
Sbjct: 321 PNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKY 380

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L +ML++ +      Y+L++ +  K  N+E A  +++ M+  G   +   Y T +  Y +
Sbjct: 381 LGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGK 440

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G +++A  L+  M +AG+ P   T+N+LI G  K   + E+    +++  R   P    
Sbjct: 441 KGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVT 500

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           F  +I      GN ++A  +     +    P+ +T S L+ GY +   + E   L+++M 
Sbjct: 501 FTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKML 560

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              +   +  Y SLI   C  G +++A     +M  H ++P    + +LV
Sbjct: 561 DAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALV 610



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 107/226 (47%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+ AT   LI + CK G ++    +  R+  +   P V+   +L+    ++  +++   L
Sbjct: 391 PSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFEL 450

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           L  M    +  D + Y+++++  +K   +  A  + +E+ +RGFS +   +T  IG +  
Sbjct: 451 LSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSN 510

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G  EEA  L   M    L+P   T + L+ G  + + + E+     +M+   L      
Sbjct: 511 KGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVIL 570

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
           +N +I   C  GN   A  ++++ ++ G  PN IT+  L+ GY K+
Sbjct: 571 YNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKK 616



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 115/271 (42%), Gaps = 38/271 (14%)

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           ++E   +  + L+ +M   N+       + ++ A ++   L  A    +EM  +G   N+
Sbjct: 162 VKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNA 221

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
            + + FI  YC  G I+    L+ EM+  G+KP                           
Sbjct: 222 SIISLFISGYCSQGNIDTGWKLLMEMKYLGIKP--------------------------- 254

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
                      A+  +I  LC+    K+A  +L      G   + ++ S ++ GY K G+
Sbjct: 255 --------DVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGK 306

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
            +E + +   +E  ++SP +  + S IS LC  G + +A K F+ M    L+P    Y +
Sbjct: 307 SEEAMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTT 363

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           ++  + +  + + AL    +M+  G++PS +
Sbjct: 364 MMAGYCKVKDISNALKYLGKMLKRGIRPSVA 394


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 18/343 (5%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A +    ++Q G + +++++  LIH   K+ +      I++ ML N   PN  T  
Sbjct: 172 LIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYT 231

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            LI   CK G+ +    +  R+   +     I +  +  RI+  E  E  +V        
Sbjct: 232 ALIDGHCKAGETEKACQIYARMKNDKVD---IPDVDIYFRIVDSELKEPNVV-------- 280

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                   Y  +V    K   ++ A  + E M   G   N  +Y   I  +C+ GK++EA
Sbjct: 281 -------TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEA 333

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             +  +M   G  P   T++ LI+   K KR++ +L    +M+     P+   + EM+  
Sbjct: 334 QEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDG 393

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G   +A  ++ +  +KG  PN +TY+ +I G+ K G +   L+L   M  K  +P 
Sbjct: 394 LCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPN 453

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              Y  LI+  C  G L++A K  + MK       + +Y  ++
Sbjct: 454 FITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVI 496



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 166/386 (43%), Gaps = 52/386 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FE A++V R +  +GF     +++ +I  +  + + +  ++++Q M  N   P+  T  T
Sbjct: 103 FEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTT 162

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   CK G ++   +  D +    C+P V+                             
Sbjct: 163 LLDRFCKVGLIEQARNWFDEMQQDGCAPNVV----------------------------- 193

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                  Y+ +++A +K R L  A  ++E ML  G   N   YT  I  +C+ G+ E+A 
Sbjct: 194 ------TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKAC 247

Query: 184 CLMQEMENAGL-----------------KPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
            +   M+N  +                 +P   T+  L++G  KA +++E+    E M  
Sbjct: 248 QIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSL 307

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
               P+   ++ +I   C+ G   +A  + T  L  G SPN  TYS LI    K+  +  
Sbjct: 308 EGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDL 367

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
            LK+  +M   S +P +  YT ++  LC+ GK +EA +   +M+     P V  Y +++ 
Sbjct: 368 ALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMID 427

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
              + G   + L L + M S+G  P+
Sbjct: 428 GFGKAGRVDRCLELLQLMTSKGCAPN 453



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 160/375 (42%), Gaps = 23/375 (6%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT--YVD 79
           S + FN+L+H   +S      +++ + M+     P       LI  +C    L +   + 
Sbjct: 10  SPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIG 69

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQ----EERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           + +R + +     V++N   +    +      + E+   +++ M+ K  I D+  YS ++
Sbjct: 70  LAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVI 129

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                   +E A  +++EM + G + + + YTT +  +C+ G IE+A     EM+  G  
Sbjct: 130 GYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCA 189

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA--- 252
           P   T+  LI    K +++  +    E M+S   +P+   +  +I   C+ G  ++A   
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249

Query: 253 -----NGMLTLA-LDKGF--------SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
                N  + +  +D  F         PN +TY  L+ G  K  +++E   L   M  + 
Sbjct: 250 YARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG 309

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
             P    Y +LI   C+ GKL+EA + F  M  H   P V  Y SL+    +      AL
Sbjct: 310 CEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLAL 369

Query: 359 HLCEEMVSEGLKPST 373
            +  +M+     P+ 
Sbjct: 370 KVLTKMLENSCAPNV 384



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 36/370 (9%)

Query: 30  IHVVTKSDRNDLV-WRIYQHMLEN-IRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
           I+   K+D+ D+    IY  ++++ ++ PN  T   L+  LCK  +++   D+L+ +  +
Sbjct: 249 IYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLE 308

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
            C P  I+  +LI    +  +++E   +  +ML      +   YS ++    K + L+ A
Sbjct: 309 GCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLA 368

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
           L V  +ML+   + N  +YT  +   C+ GK +EA  LM  ME  G  P   T+  +I+G
Sbjct: 369 LKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDG 428

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN-------------- 253
             KA R++  L   + M S+   P+   +  +I   C  G    A+              
Sbjct: 429 FGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKH 488

Query: 254 -------------------GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
                              G+L    + G  P    Y  LI  + K G ++  L+L+ E+
Sbjct: 489 IGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL 548

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
              S +     Y SLI SL    K+++A K +  M     VP + +   L+   L  G  
Sbjct: 549 SSFS-AAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKW 607

Query: 355 AKALHLCEEM 364
            +AL L + +
Sbjct: 608 EEALQLSDSI 617



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 7/272 (2%)

Query: 89  CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
           C P  ++  SL+    +         LLK+M+        + Y++++       +L S  
Sbjct: 7   CYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSME 66

Query: 149 VV------YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
           V+      Y EML+ G   N      F    C  GK E+A  +++EM + G  P   T++
Sbjct: 67  VIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYS 126

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +I     A ++E++    ++M    + P    +  ++ R C+ G  +QA          
Sbjct: 127 KVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQD 186

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G +PN +TY+ LI  Y K  ++    +++  M      P +  YT+LI   C+ G+ E+A
Sbjct: 187 GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKA 246

Query: 323 DKYFKIMKSHSL-VPGVDIYESLVGIHLEKGN 353
            + +  MK+  + +P VDIY  +V   L++ N
Sbjct: 247 CQIYARMKNDKVDIPDVDIYFRIVDSELKEPN 278



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 8/226 (3%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           M+  G   +  ++ + + AYC  G    A  L+++M   G +P    +N+LI G    + 
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 214 IEE-------SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           +           +Y E +    +L   +  N   R LC  G  ++A  ++   + KGF P
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCN-FTRCLCCIGKFEKAYNVIREMMSKGFIP 120

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           +  TYS +IG      ++++  +L+ EM+   I+P +  YT+L+   C+ G +E+A  +F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             M+     P V  Y +L+  +L+    ++A  + E M+S G  P+
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPN 226



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 132/316 (41%), Gaps = 3/316 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   +   G   + I ++ LI    K  + D    ++  ML +   PN  T  +LI 
Sbjct: 298 ARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLID 357

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            L K  +L   + +L ++    C+P V++ T ++  + +  + +E   L+  M  K    
Sbjct: 358 KLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y+ ++    K   ++  L + + M  +G + N   Y   I   C  G +++A+ L+
Sbjct: 418 NVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLL 477

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +EM+      +   +  +IEG   +     SL    ++     +P    +  +I    + 
Sbjct: 478 EEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKA 535

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A   L   L    +  + TY  LI       ++ +  KLY +M  +   P L   
Sbjct: 536 GRLEMALE-LHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSML 594

Query: 307 TSLISSLCQCGKLEEA 322
             LI  L + GK EEA
Sbjct: 595 VCLIKGLLRVGKWEEA 610


>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 161/348 (46%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L + N ++  + K+ R D VW+++  ML     P+  T  TL++A    G +    ++ 
Sbjct: 124 ALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVW 183

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           +++  +R  P V+  +++I  + +E  + E   L   M    +  +   Y+ ++ +  K 
Sbjct: 184 NQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKR 243

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +   L +Y+E+LK G   N+ + TT IG +    +I +      EM   G+ P    +
Sbjct: 244 DGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVY 303

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G  ++   +E+L+  + M    L P     + ++R LC  G  + A   L L   
Sbjct: 304 NSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQ 363

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G + N   Y+ LI  + K+G + E L     M    I P +  Y+SLI    +  K+E 
Sbjct: 364 SGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEI 423

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           A   +  M +  + P V  Y +++  H + G+   A  L +EM  +G+
Sbjct: 424 AMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGI 471



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 163/376 (43%), Gaps = 18/376 (4%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G   +L ++N L+    K D  +    +YQ +L++   PN   I TLI       +
Sbjct: 221 MKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANR 280

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +    +    +H    +P V V  SLI    +    +E + + + M R  +  D    S+
Sbjct: 281 ISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSI 340

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           IV        ++ A    E M + G + N+  Y   I  +C+ G + EA      M   G
Sbjct: 341 IVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVG 400

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   T++ LI+G +K +++E ++    +M+++ + P+   +  MI    + G+   A 
Sbjct: 401 IEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAF 460

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE----VLKLYYEMEYKSISPTLPAYT-- 307
            +     +KG S N IT S L+ G  +E  +Q+    ++K   + +   I+     YT  
Sbjct: 461 RLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTE 520

Query: 308 ------------SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
                       +LI  L   G+  EA K+F  M+   +VP    Y  L+      G   
Sbjct: 521 EDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVL 580

Query: 356 KALHLCEEMVSEGLKP 371
            A+ L  +MV  G+KP
Sbjct: 581 NAMMLYADMVKIGVKP 596



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 124/283 (43%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P +    +++  +++  R +    L   ML + M+   + Y+ +V A     ++  A  V
Sbjct: 123 PALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEV 182

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
           + +M+ R    N   Y+T I   CE G + EA  L   M+  G++P   T+N L+    K
Sbjct: 183 WNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCK 242

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              +  +L+  ++++   L+P+      +I                      G +P    
Sbjct: 243 RDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPV 302

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           Y+ LI G  + G  QE L +Y +M    + P     + ++  LC  G+++ A ++ ++M+
Sbjct: 303 YNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQ 362

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
              +      Y +L+  H + GN A+AL  C  M   G++P+ 
Sbjct: 363 QSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNV 405



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 1/194 (0%)

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L  EM + G+ P   T+N L+  C     + ++     QM++R++ P+   ++ MI  LC
Sbjct: 147 LFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLC 206

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           E G   +A  +  +  + G  PN  TY+ L+  + K   +   L LY E+    + P   
Sbjct: 207 EEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAV 266

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
             T+LI       ++ +    F  M  + + P V +Y SL+      G   +AL + ++M
Sbjct: 267 IITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDM 326

Query: 365 VSEGLKPSTSYLCS 378
              GL P   + CS
Sbjct: 327 TRVGLCPD-EFTCS 339



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 75/144 (52%)

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           LP+  A N ++  L +     +   +    L +G  P+ +TY+ L+     EG++ +  +
Sbjct: 122 LPALPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWE 181

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           ++ +M  + I P +  Y+++I  LC+ G + EA++ F +MK   + P +  Y +L+  H 
Sbjct: 182 VWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHC 241

Query: 350 EKGNKAKALHLCEEMVSEGLKPST 373
           ++    + L L +E++  GL P+ 
Sbjct: 242 KRDGVNRTLTLYQELLKSGLVPNA 265



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 18/175 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E+A  +   +  +G   +++++  +IH   K    D  +R+++ M E     N  T+
Sbjct: 419 RKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITV 478

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKR--------CSPMV------IVNT----SLILRI 103
             L+  LC+  ++Q  V  + +  G++        CS         I+N+    +LI  +
Sbjct: 479 SVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGL 538

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
             + +  E       M   +M+ D+  YSL++  +  +  + +A+++Y +M+K G
Sbjct: 539 YIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIG 593



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 18/208 (8%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A   C  + + G   +++++++LI   +K  + ++   IY  M+     PN  T   +I 
Sbjct: 389 ALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIH 448

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEG-MVLLKRMLRKN-- 123
              K G L     +   +  K  S   I  + L+  + +E R+++  M ++K   +K   
Sbjct: 449 GHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKPG 508

Query: 124 ---------------MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
                           I +++ Y  ++Y          A   +  M +     +SF Y+ 
Sbjct: 509 DINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSL 568

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKP 196
            I   C  G +  A  L  +M   G+KP
Sbjct: 569 LIRGQCMLGYVLNAMMLYADMVKIGVKP 596


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 159/371 (42%), Gaps = 52/371 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 84  FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEEILE-CGYPASLYFFN 127

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 128 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV---------------------------- 159

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   ML  G   + + Y+  I   C+  K+++A
Sbjct: 160 -------SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 212

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 213 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 272

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA+ ++     K   P++ITY+ LI G  KEG++    +    M  ++I   
Sbjct: 273 LCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLD 332

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS LCQ G+  +A+K  + M +  L P    Y  ++    +KG+  K   L +
Sbjct: 333 EVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLK 392

Query: 363 EMVSEGLKPST 373
           EM  +G  PS 
Sbjct: 393 EMQRDGHVPSV 403



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 3/277 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ +  FD    + + G   S++S+NTL++   +    D  +R+   ML +   P+  T
Sbjct: 139 IRVAQSVFDA---ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYT 195

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 196 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +    +   YTT I   C+ G ++
Sbjct: 256 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLD 315

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  +  +  LI G  +  R  ++     +M++  L P    +  +I
Sbjct: 316 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMII 375

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              C+ G+  + + +L      G  P+ +TY+ L+ G
Sbjct: 376 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 2/213 (0%)

Query: 161 ANSFVYTTFIGAYCEYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           ++ +V++  I AY E G + +A  C     E+    P+D T   ++E   K K  +    
Sbjct: 51  SDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWG 109

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + E+++      S   FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY 
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           + G++ E  +L   M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP   
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + +L+  H + G    A+ + ++M+S+ L P 
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPD 262


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 157/323 (48%), Gaps = 2/323 (0%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGG 72
           +++   +S    SFN +I  V +         + + M E    P+  T   L+  LC+  
Sbjct: 208 WIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAK 267

Query: 73  QLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           Q+    D+L R+     C P V+  TS+I    +  R+E+ + +   ML      +T+ Y
Sbjct: 268 QVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTY 327

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++    K  ++ESA+ +Y +++ R    +   +++ I  YC  G++++A  + +EM  
Sbjct: 328 NVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQ 387

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRLCECGNAK 250
             ++P   TF+++I    K  R  E+L +  ++ M   + P    +N +I  LC+ G  +
Sbjct: 388 HHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVE 447

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
           +AN ++T   +KG  P++ TY+ LI G+  +G I E + L+++M      P      S I
Sbjct: 448 EANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFI 507

Query: 311 SSLCQCGKLEEADKYFKIMKSHS 333
           S + + G   E D+   I   H+
Sbjct: 508 SCVLKAGMPNEVDQIMLIASGHA 530



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 163/382 (42%), Gaps = 36/382 (9%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATI 61
           L + A  +     Q G  +   ++N L++++    R      +++  +++  Y P+  + 
Sbjct: 162 LLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSF 221

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             +I  +C+ G  Q  +++++R+    CSP  I +  L+  + + +++  G  LL+R+ R
Sbjct: 222 NVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQR 281

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +                                     N   YT+ I  YC+ G++E+
Sbjct: 282 DGVC----------------------------------MPNVVTYTSVISGYCKAGRMED 307

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  +  +M  +G +P   T+N+LI G  KA  +E ++    Q++ R+  P    F+ +I 
Sbjct: 308 ALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLID 367

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-IS 300
             C CG    A  +          PN  T+S +I    K+    E L    E+  ++ I+
Sbjct: 368 GYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIA 427

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y  +I  LC+ G++EEA+     M+     P    Y  L+  H  KG   +A+ L
Sbjct: 428 PQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITL 487

Query: 361 CEEMVSEGLKPSTSYLCSASTC 382
             +MV  G +P    + S  +C
Sbjct: 488 FHKMVETGCRPDKITVNSFISC 509



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/312 (20%), Positives = 149/312 (47%), Gaps = 3/312 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCS-PMVIVNTSLILRIIQEERIEEGMV 114
           P+E +   +I+ LC+ G+ +  + + D++  +    P  +  + +         ++  + 
Sbjct: 109 PSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVT 168

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FSANSFVYTTFIGAY 173
           LL +  +     +  AY+ ++   +     + A+ ++E  ++ G +S + + +   I   
Sbjct: 169 LLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGV 228

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL-LPS 232
           C  G  ++A  L++ M   G  P   T N+L++G  +AK++        ++    + +P+
Sbjct: 229 CRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPN 288

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +  +I   C+ G  + A  +    L+ G  PN +TY+ LI GY K  +++  +++Y 
Sbjct: 289 VVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 348

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           ++  +   P +  ++SLI   C+CG+L++A + +K M  H + P V  +  ++    ++ 
Sbjct: 349 QLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQN 408

Query: 353 NKAKALHLCEEM 364
             A+AL    E+
Sbjct: 409 RSAEALGFLREL 420



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 126/253 (49%), Gaps = 2/253 (0%)

Query: 9   DVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           D+ R L++ G  + +++++ ++I    K+ R +    +Y  MLE+   PN  T   LI+ 
Sbjct: 274 DLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLING 333

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
             K   +++ V M  ++  +RC P V+  +SLI    +  ++++ M + K M + ++  +
Sbjct: 334 YGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPN 393

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              +S+I+++  K      AL    E+ ++   +  +F+Y   I   C+ G++EEAN ++
Sbjct: 394 VYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIV 453

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +ME  G  P   T+ +LI G     RI E+++   +M+     P     N  I  + + 
Sbjct: 454 TDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKA 513

Query: 247 GNAKQANGMLTLA 259
           G   + + ++ +A
Sbjct: 514 GMPNEVDQIMLIA 526



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/280 (20%), Positives = 120/280 (42%), Gaps = 3/280 (1%)

Query: 97  TSLILRIIQEERIEEGMVLLKRML-RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
           + +I  + +  R  + + L  +M  +   + D + +S +  +      L++A+ +  +  
Sbjct: 115 SHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTKAS 174

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL-KPYDETFNLLIEGCAKAKRI 214
           + G     + Y   +      G+ ++A  L +     GL  P   +FN++I+G  +    
Sbjct: 175 QFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNF 234

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT-LALDKGFSPNEITYSH 273
           +++L   E+M      P     N ++  LC      + + +L  L  D    PN +TY+ 
Sbjct: 235 QKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTS 294

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           +I GY K G +++ L +Y +M      P    Y  LI+   +   +E A + ++ +    
Sbjct: 295 VISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRR 354

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
             P V  + SL+  +   G    A+ + +EM    ++P+ 
Sbjct: 355 CPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNV 394



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 6/147 (4%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDK-GFSPNEITYSHLIGGYAKEGEIQEVLK 289
           PS  +++ +I  LC  G  + A  +     D+ G+ P+ + +S + G     G +   + 
Sbjct: 109 PSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVT 168

Query: 290 LYYEMEY--KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIYESLVG 346
           L  +     + I P   AY +L++ L   G+ ++A   F+      L  P    +  ++ 
Sbjct: 169 LLTKASQFGRRIEPY--AYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIK 226

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
                GN  KAL L E M   G  P T
Sbjct: 227 GVCRVGNFQKALELVERMTEFGCSPDT 253


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 168/363 (46%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   + + G+  S+++F +L+H     +R    + +   M+++   PN     TLI 
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L   +++L+ +  K     V+   +L+  +    R  +   +L+ M+++++  
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + ++ ++   VK  NL+ A  +Y+EM++     N+  Y + I   C +G++ +A    
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M + G  P   T+N LI G  K + ++E +   ++M           +N +I   C+ 
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  + A  +    + +  +P+ IT+  L+ G    GEI+  L  + +M        + AY
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I  LC+  K+E+A + F  +    + P    Y  ++    + G + +A  L   M  
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484

Query: 367 EGL 369
           EG+
Sbjct: 485 EGI 487



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 130/280 (46%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
           P ++  T L+       R E  +   ++M    + HD  +++++++   +   L  AL V
Sbjct: 69  PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             +M+K G+  +   + + +  +C   +I +A  L+  M  +G +P    +N LI+G  K
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              +  +L    +M  + L      +N ++  LC  G    A  ML   + +  +P+ +T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           ++ LI  + K+G + E  +LY EM   S+ P    Y S+I+ LC  G+L +A K F +M 
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           S    P V  Y +L+    +     + + L + M  EG  
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 2/318 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           S++ F  L+       R + V    Q M L  I + +  +   LI   C+  +L   + +
Sbjct: 70  SIVDFTRLLTATANLRRYETVIYFSQKMELYGISH-DLYSFTILIHCFCRCSRLSFALSV 128

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L ++      P ++   SL+       RI +   L+  M++     + + Y+ ++    K
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              L  AL +  EM K+G  A+   Y T +   C  G+  +A  ++++M    + P   T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           F  LI+   K   ++E+    ++M+   + P+   +N +I  LC  G    A     L  
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            KG  PN +TY+ LI G+ K   + E +KL+  M  +  +  +  Y +LI   CQ GKL 
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368

Query: 321 EADKYFKIMKSHSLVPGV 338
            A   F  M S  + P +
Sbjct: 369 VALDIFCWMVSRRVTPDI 386



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 115/270 (42%)

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           R+   + +L +M++       + +  +++    +  +  A  +   M+K G+  N  VY 
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           T I   C+ G++  A  L+ EME  GL     T+N L+ G   + R  ++      MM R
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
            + P    F  +I    + GN  +A  +    +     PN +TY+ +I G    G + + 
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
            K +  M  K   P +  Y +LIS  C+   ++E  K F+ M        +  Y +L+  
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           + + G    AL +   MVS  + P     C
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHC 390



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 128/296 (43%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
             +A ++   +E++G    ++++NTL+  +  S R     R+ + M++    P+  T   
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    K G L    ++   +      P  +   S+I  +    R+ +       M  K 
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y+ ++    K R ++  + +++ M   GF+A+ F Y T I  YC+ GK+  A 
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M +  + P   T  +L+ G      IE +L   + M   +      A+N MI  L
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           C+    ++A  +      +G  P+  TY+ +I G  K G  +E  +L   M+ + I
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 137/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  +E  I     +   + +  +    ++Y+ ++   +++ +L+    +   M   G
Sbjct: 148 LMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASG 207

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K   ++ ++
Sbjct: 208 VHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAM 267

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ LLP    +N +I  LC+ G+ KQA+ ++      G  P++ITY+ LI G 
Sbjct: 268 EIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGC 327

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P  
Sbjct: 328 CKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDT 387

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+  K   L +EM  +G  PS
Sbjct: 388 RTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 421



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 148/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +H     P V   + LI  + +E ++++   L   ML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ +++ ++ ++    K   ++ A+ +Y++ML +    +   Y   I   C+ G ++
Sbjct: 240 EKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + + M+   +     A+  +I
Sbjct: 300 QAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+     
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L+KG  PN +T++ LI G+ K G +   +++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 238 MLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 298 LKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIR 349



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 10/258 (3%)

Query: 124 MIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYCE 175
           MIH   ++ +   AK      V  +   SA  V+  +L+   +  S  +V++  I AY E
Sbjct: 25  MIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLE 84

Query: 176 YGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
            G + +A +C     E+    P+D T   ++E   K K  +    + E+++      S  
Sbjct: 85  LGFLRDAIDCYRLTREHKFCVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLY 143

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   M
Sbjct: 144 FFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
               + P +  Y+ LI+ LC+  K+++A+K F  M    LVP    + +L+  H + G  
Sbjct: 204 HASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWV 263

Query: 355 AKALHLCEEMVSEGLKPS 372
             A+ + ++M+S+ L P 
Sbjct: 264 DLAMEIYKQMLSQSLLPD 281


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 149/333 (44%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+   +L
Sbjct: 125 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTL 183

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +   I+   ++EG                               L+S       ML  G 
Sbjct: 184 MNGYIRLGDLDEGF-----------------------------RLKSV------MLASGV 208

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN    EM   GL P   TF  LI+G  K  R++ +  
Sbjct: 209 QPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKE 268

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ITY+ LI G  
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCC 328

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I      YT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 329 KEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTG 388

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM  +G  PS
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPS 421



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 145/312 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++       ML
Sbjct: 180 XNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEML 239

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ A  +Y++ML +    +   Y T I   C+ G ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ +M   GLKP   T+  LI+GC K   ++ +  + ++M+   +      +  +I
Sbjct: 300 QAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALI 359

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L     P+  TY+ +I  + K+G++ +  KL  EM+    +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHA 419

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 420 PSVVTYNVLMNG 431



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 109/232 (46%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 177

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            + N L+ G  +   ++E       M++  + P    ++ +I  LC+      AN     
Sbjct: 178 VSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDE 237

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +    ++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 298 LKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIR 349



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + +   AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 24  TMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAILETKGTQRSDIYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKLWVPFD-TCRKVLEYLMKLKYFKLVWGFYEEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++ + L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSV 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A  + ++M+S+ L P 
Sbjct: 263 VDLAKEIYKQMLSQSLLPD 281


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 167/387 (43%), Gaps = 12/387 (3%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATI 61
           LF  A  +   ++  G S S+I+FN+L+ ++ K  R ++   ++  M       P+  T 
Sbjct: 112 LFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTF 171

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI   CK   +         +    C P V+   +L+  + +  ++     ++K M++
Sbjct: 172 NILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVK 231

Query: 122 K--NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           K  ++  D + Y+ +V      + ++ ALVV+EEM+ RG   N   Y T I   CE  K 
Sbjct: 232 KMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKF 291

Query: 180 EE-ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++    L   +   G  P   T+N L+     A   +E+L   ++M   K+ P  + ++ 
Sbjct: 292 DKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSV 351

Query: 239 MIRRLCECGNAKQANGMLT-------LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +IR LC+ G+ ++A  +         L  D G +P    Y+ +     K G+  +  +++
Sbjct: 352 LIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVF 411

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            ++  K      P+Y +LI   C+ G  E   K    M     VP  + Y  L+   L+K
Sbjct: 412 RQLMKKGTQDP-PSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQK 470

Query: 352 GNKAKALHLCEEMVSEGLKPSTSYLCS 378
           G    A    E M+     P TS   S
Sbjct: 471 GEPILAYKTLERMLKSSYLPKTSVFHS 497



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/387 (21%), Positives = 169/387 (43%), Gaps = 22/387 (5%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR---- 62
           AF+   +  + GF+    S+  ++ ++ ++        I ++ L +I   +  +++    
Sbjct: 43  AFEFFNWASRNGFAHDSRSYFMMLDILGRNGN----LNIARNFLFSIERRSNGSVKIEDR 98

Query: 63  ---TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
              TL+ +    G     + +   +     SP VI   SL+L +++  R      +   M
Sbjct: 99  FCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEM 158

Query: 120 LRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
                +  DT  +++++    K   ++     ++EM +     +   Y T +   C  GK
Sbjct: 159 CGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGK 218

Query: 179 IEEANCLMQEM--ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
           +  A+ +++ M  +   L P   T+  L+ G    + I+E+L   E+M+SR L P+   +
Sbjct: 219 VRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITY 278

Query: 237 NEMIRRLCECGNAKQANGMLTLALD-KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           N +I+ LCE     +   +L  A+  +GF P+  TY+ L+      G   E LK++ +M+
Sbjct: 279 NTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMK 338

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFK-------IMKSHSLVPGVDIYESLVGIH 348
              + P    Y+ LI +LCQ G  E A++ F        +++     P V  Y  +    
Sbjct: 339 ELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFL 398

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSY 375
            + G   KA  +  +++ +G +   SY
Sbjct: 399 CKNGKTHKAERVFRQLMKKGTQDPPSY 425



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/345 (20%), Positives = 135/345 (39%), Gaps = 40/345 (11%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RGF     ++NTL++    +   D   ++++ M E    P+ AT   LI  LC+ G  + 
Sbjct: 305 RGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFER 364

Query: 77  YVDMLDRIHGKR-------CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
              + D++  +        C+P+V     +   + +  +  +   + +++++K    D  
Sbjct: 365 AEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG-TQDPP 423

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +Y  ++    K    E+   +   ML+R +  +   Y   I  + + G+   A   ++ M
Sbjct: 424 SYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERM 483

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS--------------- 234
             +   P    F+ ++    K     ES S+   M+ RK+  + +               
Sbjct: 484 LKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLR 543

Query: 235 --AFN---------------EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
             AF                E+I  +C+ G    A  ML+  L+KG + +    + +I G
Sbjct: 544 IKAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEG 603

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
             K     E   LYY +  KS    L     L ++L   G+ EEA
Sbjct: 604 LCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGRSEEA 648



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 1/149 (0%)

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-E 295
           N ++R     G   +A  + +L    G SP+ IT++ L+    K G       ++ EM  
Sbjct: 101 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 160

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              ++P    +  LI   C+   ++E  ++FK M   +  P V  Y +LV      G   
Sbjct: 161 TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 220

Query: 356 KALHLCEEMVSEGLKPSTSYLCSASTCRG 384
            A ++ + MV +    S   +   +  RG
Sbjct: 221 IAHNVVKGMVKKMKDLSPDVVTYTTLVRG 249


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 161/352 (45%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            + S N+L++V+ K  + ++  ++Y  M++     +  T+  ++  LCK G+++    ++
Sbjct: 136 DVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLI 195

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
           ++  G+ C P ++   +LI    ++   E   VL K +  K  +     Y  I+    K 
Sbjct: 196 EKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKK 255

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
              E    +  EM +RG   +  +Y   I A  ++G   EA   +  M  +G  P   T+
Sbjct: 256 GKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATY 315

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+LI G      + ++    EQ + R LLP+  ++  +I   C+ G   +A  +L    +
Sbjct: 316 NILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSE 375

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  P+ +TY+ LI G    GE+   L +  +M  K + P    Y  L+S LC+ G+L  
Sbjct: 376 RGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPA 435

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A      M   ++ P   I  +LV   +  G+  +A  L E  + +G+ P  
Sbjct: 436 AKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGV 487



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 165/369 (44%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           FEV   +   + +RG  +S+  +N +I    K             M+++   P+ AT   
Sbjct: 258 FEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNI 317

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI+  C  G++     +L++   +   P  +  T LI    ++      + LL +M  + 
Sbjct: 318 LITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERG 377

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              D + Y+ +++  +    ++ AL V  +M+++G   ++ +Y   +   C+ G++  A 
Sbjct: 378 HKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAK 437

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ EM +  + P       L++G  +    EE+    E  + + + P    +N MI+  
Sbjct: 438 VLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGY 497

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  K A       +    SP+E TYS +I GY K  ++   L+++  M   +  P +
Sbjct: 498 CKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNV 557

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT LI+  C  G +  A+K FK M S  L P V  Y  L+G   +  N  KA    E+
Sbjct: 558 VTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQ 617

Query: 364 MVSEGLKPS 372
           M+ E   P+
Sbjct: 618 MLMEKCLPN 626



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 157/357 (43%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           RG   +++ +NTLI    K    +    +++ +      P   T   +I+  CK G+ + 
Sbjct: 201 RGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEV 260

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              +L  +  +     + +  ++I    +     E    +  M++     D   Y++++ 
Sbjct: 261 VDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILIT 320

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
                  +  A  + E+ +KRG   N   YT  I  YC+ G+   A  L+ +M   G KP
Sbjct: 321 GSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKP 380

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  LI G   A  ++ +L+   +M+ + +LP  + +N ++  LC+ G    A  +L
Sbjct: 381 DLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLL 440

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
              LD+  +P+    + L+ G+ + G+ +E  KL+     K I P +  Y ++I   C+ 
Sbjct: 441 AEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKF 500

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           G +++A   FK M      P    Y +++  +++  +   AL +   MV    KP+ 
Sbjct: 501 GMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNV 557



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 131/326 (40%), Gaps = 37/326 (11%)

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
           +IH   C P V    SL+  +++  ++E    +   M+ +N   D     ++V    K  
Sbjct: 129 KIH--HCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEG 186

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            +E    + E+   RG   N   Y T I  YC+ G  E AN L +E++  G  P  +T+ 
Sbjct: 187 KVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYG 246

Query: 203 LLIEGCAKAKRIE-----------------------------------ESLSYCEQMMSR 227
            +I G  K  + E                                   E+      M+  
Sbjct: 247 AIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKS 306

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
              P  + +N +I   C CG   +A  +L  A+ +G  PN+++Y+ LI  Y K+GE    
Sbjct: 307 GCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRA 366

Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
           L L  +M  +   P L  Y +LI  L   G+++ A      M    ++P  +IY  L+  
Sbjct: 367 LDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSG 426

Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
             +KG    A  L  EM+ + + P  
Sbjct: 427 LCKKGRLPAAKVLLAEMLDQNVAPDA 452



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 151/339 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D   ++ + G    + ++N LI             ++ +  ++    PN+ +   LI 
Sbjct: 296 AADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIH 355

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+    +D+L ++  +   P ++   +LI  +I    ++  + +  +M+ K ++ 
Sbjct: 356 NYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLP 415

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y++++    K   L +A V+  EML +  + ++F+  T +  +  +G  EEA  L 
Sbjct: 416 DANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLF 475

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +     G+ P    +N +I+G  K   ++++L   ++M+     P    ++ +I    + 
Sbjct: 476 ELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKM 535

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
            +   A  M  L +     PN +TY+ LI G+   G+I    K + +M    + P +  Y
Sbjct: 536 NDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTY 595

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           T LI   C+   L +A  +F+ M     +P    Y  L+
Sbjct: 596 TILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLM 634



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 153/357 (42%), Gaps = 13/357 (3%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+   + +RG    L+++  LIH +  +   D+   +   M+E    P+      L+S
Sbjct: 366 ALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMS 425

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L     +L  +  +  +P   +  +L+   I+    EE   L +  + K +  
Sbjct: 426 GLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDP 485

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + Y+ ++    K   ++ AL+ ++ M++   S + F Y+T I  Y +   +  A  + 
Sbjct: 486 GVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMF 545

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M     KP   T+ LLI G   +  I  +    +QM+S +L P+   +  +I   C+ 
Sbjct: 546 GLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKG 605

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGY------------AKEGEIQEVLKLYYEM 294
            N  +A       L +   PN++TY++L+ G             +++ E   VL+ +  M
Sbjct: 606 VNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMM 665

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG-VDIYESLVGIHLE 350
                     +Y S++  LCQ   ++ A      M S   +P  V +   L G+ LE
Sbjct: 666 ISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLE 722



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 3/260 (1%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAY 173
           LLK M  K+++    A+SL++        ++ AL  Y   +K      + F   + +   
Sbjct: 88  LLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVL 147

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
            ++GK+E A  +  EM +   +  + T  ++++G  K  ++E+     E+   R  +P+ 
Sbjct: 148 VKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNI 207

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             +N +I   C+ G+ ++AN +      KGF P   TY  +I G+ K+G+ + V KL  E
Sbjct: 208 VFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVE 267

Query: 294 MEYKSISPTLPAYTSLISSLCQCG-KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           M  + +  ++  Y ++I +  + G ++E AD    ++KS    P +  Y  L+      G
Sbjct: 268 MSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKS-GCDPDMATYNILITGSCSCG 326

Query: 353 NKAKALHLCEEMVSEGLKPS 372
              KA  L E+ +  GL P+
Sbjct: 327 EVHKAEQLLEQAIKRGLLPN 346



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY----------------CEQM 224
           E   L++ M++  L P  E F+L+I   A    ++ +L +                C  +
Sbjct: 84  EVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSL 143

Query: 225 MS-----RKLLPSCSAFNEMIRR---------------LCECGNAKQANGMLTLALDKGF 264
           ++      K+  +C  ++EM+ R               LC+ G  +    ++     +G 
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGC 203

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            PN + Y+ LI GY K+G+ +    L+ E++ K   PT+  Y ++I+  C+ GK E  DK
Sbjct: 204 MPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
               M    L   + IY +++    + G + +A      M+  G  P  +
Sbjct: 264 LLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMA 313



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/297 (19%), Positives = 116/297 (39%), Gaps = 19/297 (6%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           +LFE+         ++G    ++ +N +I    K          ++ M++ +  P+E T 
Sbjct: 473 KLFELTI-------EKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTY 525

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            T+I    K   L   + M   +    C P V+  T LI        I       K+ML 
Sbjct: 526 STIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLS 585

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             +  + + Y++++    K  NL  A   +E+ML      N   Y   +           
Sbjct: 586 LRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVI 645

Query: 182 ANCLMQEMENA------------GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           +N   ++ EN+            G      ++N ++    + K ++ +L   ++MMS+  
Sbjct: 646 SNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGF 705

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           LP   +   ++  LC  G ++  N +++  L++      + YS  +  +  +G+  E
Sbjct: 706 LPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSE 762



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK-IMKSHSLVPGVDIY 341
           E++ +LK+   M+ K + PT  A++ +IS    CG ++ A ++++  +K H  VP V   
Sbjct: 84  EVESLLKI---MKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSC 140

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
            SL+ + ++ G    A  + +EMV    +     +C
Sbjct: 141 NSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVC 176


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 39/397 (9%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           ++R F     ++  LIH + ++     +W+  Q M+ +      A +  ++  L K   +
Sbjct: 116 KRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMV 175

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSL 133
              + +  +I G++C P      S+IL ++QE   E+   L   M  + + + DT+ YS 
Sbjct: 176 NKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSA 235

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K+   +SA+ +++EM + G    + +YTT +G Y + G++E+A  L+QEM+  G
Sbjct: 236 LIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295

Query: 194 L---------------------KPYDETFNLLIEGC--------------AKAKRIEESL 218
                                 + Y    N+L EGC               KA R+ +++
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAI 355

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCEC-GNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              E+M S +  P+   +N +I+ L E    A +A        + G  P+  TYS LI G
Sbjct: 356 KLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDG 415

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           + K   +++ L L  EM+ K  +P   AY SLI++L +  + E A++ F+ ++ +     
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSS 475

Query: 338 VDIYESLVGIHLEK-GNKAKALHLCEEMVSEGLKPST 373
             +Y  ++  HL K G  ++A+ L  EM   G  P  
Sbjct: 476 ARVYAVMIK-HLGKCGRLSEAVDLFNEMKKLGCNPDV 511



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 172/343 (50%), Gaps = 3/343 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + + ++++G +L++ ++  LI  V K+ + +  + I+ +ML+    P+   I  L
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE-RIEEGMVLLKRMLRKN 123
           I+ L K G+L   + + + +   +C+P V+   ++I  + + + R  E  +  ++M    
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++  +  YS+++    K   +E AL++ EEM ++GF+     Y + I A  +  + E AN
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461

Query: 184 CLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            L QE+ EN G       + ++I+   K  R+ E++    +M      P   A+N ++  
Sbjct: 462 ELFQELRENCGYSSA-RVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSG 520

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           +   G   +A+ +L    + G +P+  +++ ++ G+A+ G  +  ++++  M+   I P 
Sbjct: 521 MVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPD 580

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + +Y +++  L + G  EEA K  K M S      +  Y S++
Sbjct: 581 VVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 163/352 (46%), Gaps = 3/352 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++++ LI    K  R+D    ++  M EN  +P      T++    K G+++  + ++  
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C+  V   T LI  + +  ++EE   +   ML++    D +  + ++    K   
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEY-GKIEEANCLMQEMENAGLKPYDETFN 202
           L  A+ ++EEM     + N   Y T I A  E   +  EA    ++M+  G+ P   T++
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT-LALD 261
           +LI+G  K  R+E++L   E+M  +   P  +A+  +I  L +    + AN +   L  +
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELREN 470

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G+S   + Y+ +I    K G + E + L+ EM+    +P + AY +L+S + + G  +E
Sbjct: 471 CGYSSARV-YAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDE 529

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A    + M+ +   P ++ +  ++      G    A+ +   M +  +KP  
Sbjct: 530 AHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDV 581



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 3/261 (1%)

Query: 22  SLISFNTLIHVVTKSD-RNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           +++++NT+I  + +S  R    +  Y+ M EN   P+  T   LI   CK  +++  + +
Sbjct: 369 NVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLL 428

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AYSLIVYAKV 139
           L+ +  K  +P      SLI  + + +R E    L +  LR+N  + +   Y++++    
Sbjct: 429 LEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE-LRENCGYSSARVYAVMIKHLG 487

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   L  A+ ++ EM K G + + + Y   +      G  +EA+ L++ ME  G  P   
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           + N+++ G A+    + ++    +M + K+ P   ++N ++  L   G  ++A  ++   
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607

Query: 260 LDKGFSPNEITYSHLIGGYAK 280
             KGF  + ITYS ++    K
Sbjct: 608 NSKGFEYDLITYSSILEAVGK 628


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 176/400 (44%), Gaps = 38/400 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +   G+  S++++ TLI  + KS   D    + Q M +    PN  T   LI 
Sbjct: 29  ALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALID 88

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEE-GMVLLKRMLRKNMI 125
            LCK  +    +  + R+    C P ++   SLI  +    R+++ G+VL + M+    I
Sbjct: 89  GLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRI 148

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+  +    K   L+  L + EEM + G S +   + + I   C+  +I++A  +
Sbjct: 149 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQV 208

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIE------------------------------ 215
            + M   G  P   T++++++  ++A R++                              
Sbjct: 209 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIR 268

Query: 216 ----ESLSYC-EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
               ES S+  EQ M    +      N  I  LC  G    A  +L   ++ G  PN ++
Sbjct: 269 AGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLS 328

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           Y+ +I G  K G + +  KL  +M +     P +  + +LIS  C+ G+L +A +  K M
Sbjct: 329 YNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEM 388

Query: 330 KSHSL-VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           K+ ++ VP V  Y +++    + G+  +A  L EEM + G
Sbjct: 389 KAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 158/365 (43%), Gaps = 2/365 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  R F L    +NTLI  + K+ +      +   M  N    +  T  TLI  LCK G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L     +L ++    C+P V+  T+LI  + +  R  + +  +KRMLR     D + Y+ 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 134 IVYAKVKMRNLESA-LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
           +++       ++ A LV+ E M++ G   +   Y TFI   C+ GK+++   +++EM+  
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G+ P   TF  +I G  KA RI+++    + M+ R  +P    ++ M+  L         
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +L   +  G      TY+ LI    + G+I+     Y +         +  + + I +
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGA 300

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG-LKP 371
           LC+ GK   A      M     +P +  Y  ++    + GN   A  L  +M+  G  KP
Sbjct: 301 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 360

Query: 372 STSYL 376
              + 
Sbjct: 361 DVIFF 365



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 1/179 (0%)

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N LI G  KA++   +L     M +     S   +  +I  LC+ G+   A  +L    
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
           D G +PN +TY+ LI G  K     + ++    M      P L  Y SLI  LC   +++
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 321 EADKYFK-IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           +A    + +M     +P V  Y + +    + G   K L + EEM   G+ P     CS
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLEN-IRYPNEATIR 62
           F +A ++   + + G   +L+S+N +I  + KS   D  W++ + ML++    P+     
Sbjct: 307 FPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 366

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           TLIS  CK G+L     +L  +  K  C P V+   ++I    +   +++  +LL+ M
Sbjct: 367 TLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/370 (22%), Positives = 177/370 (47%), Gaps = 3/370 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIY-QHMLENIRYPNEATIR 62
            ++ F    ++ ++GF +  I FN L+  +    R D    I  + M E    PN  +  
Sbjct: 106 LDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHT 165

Query: 63  TLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
            ++  LC   + Q  +++L  +   G  C P V+  +++I  +++    ++     + ML
Sbjct: 166 IILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREML 225

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + ++ + + YS I+ A  K + ++ A+ V++ M+K G + N F YT+ +  +C  G++ 
Sbjct: 226 DRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLT 285

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA   +++M + G++P   T++  ++   K  R  E+    + M+ R L P  + ++ ++
Sbjct: 286 EAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLL 345

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
                 G   + +G+  L +     P+   ++ LI   AK+G++ E + ++ +M  + + 
Sbjct: 346 HGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLK 405

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P    Y++LI+  C+  ++E A   F+ M S+ + P    Y  ++      G  A A   
Sbjct: 406 PNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAKEF 465

Query: 361 CEEMVSEGLK 370
             +++  G K
Sbjct: 466 YVQIIKSGKK 475



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 163/351 (46%), Gaps = 3/351 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR- 83
           ++  LI     + R DL +    H+++            L+  LC   +    +D++ R 
Sbjct: 92  TYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRG 151

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN--MIHDTIAYSLIVYAKVKM 141
           +    C P V  +T ++  +  E R +E + LL  M       + + ++YS ++   +K 
Sbjct: 152 MTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKG 211

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            + + A   Y EML R    N  +Y++ I A C+   +++A  +   M   G+ P   T+
Sbjct: 212 GDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTY 271

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
             L+ G   + ++ E++ + E+M S  + P+   ++  +  LC+ G   +A  +    + 
Sbjct: 272 TSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVK 331

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  P+  TYS L+ GYA EG + E+  L+  M    + P    + +LI +  + GK++E
Sbjct: 332 RGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDE 391

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A   F  M+   L P    Y +L+  + +      AL L +EMVS G+ P+
Sbjct: 392 AMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPN 442



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 47/293 (16%)

Query: 137 AKVKMRNLESALVVYEEMLKRGFSA----------------------------------- 161
           A+V     E AL V++E+L+RG  A                                   
Sbjct: 27  ARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMV 86

Query: 162 --NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
                 Y   IG  C  G+++     +  +   G +     FN L++G    KR ++++ 
Sbjct: 87  TPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMD 146

Query: 220 YCEQMMSR-KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS--PNEITYSHLIG 276
              + M+    +P+  +   +++ LC    +++A  +L +  D G    PN ++YS +I 
Sbjct: 147 IVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVID 206

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           G  K G+  +    Y EM  + I P +  Y+S+I++LC+   +++A +    M  + + P
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTP 266

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-------SYLCSASTC 382
               Y SLV      G   +A+   E+M S G++P+         YLC    C
Sbjct: 267 NCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRC 319


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 173/393 (44%), Gaps = 36/393 (9%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--YPNEATIRTLISALCKGGQ 73
           Q G   S++++NTL+   +K  R D +  + + M        PN+ T   +I+ L + G 
Sbjct: 224 QLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGY 283

Query: 74  L------------------------------QTYVDMLDRIH----GKRCSPMVIVNTSL 99
           L                              + +V  +D +      +   P V+   ++
Sbjct: 284 LEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAM 343

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           I  ++Q  +IE        M    ++ D I Y+ ++    K  N + AL+++ ++ + G 
Sbjct: 344 IHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGL 403

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
           +     Y   I  YC  G +EEA  L +EM   G  P   T+ +L++G      +  +  
Sbjct: 404 APTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTRE 463

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
           + ++M+S+ L P C A+N  I      G+  ++  +  + + +G S + +TY+ LI G  
Sbjct: 464 FFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLC 523

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K G +++  +L  +M    + P    YT LI + C+ G L EA K+F  M S  L P   
Sbjct: 524 KTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAV 583

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++  +  +GN   A     +M+ EG++P+
Sbjct: 584 TYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPN 616



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 150/332 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E  G   +++++N +IH + +S + +     +  M      P+  T  +L++  CK G 
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGN 387

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +  + +   +     +P V+    LI    +   +EE   L + M+ +  + D   Y++
Sbjct: 388 QKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTI 447

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     + +L      ++EML +G   + F Y T I A    G I ++  L + +   G
Sbjct: 448 LMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEG 507

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           +     T+N+LI+G  K   ++++     QM+S  L P C  +  +I   CE G  ++A 
Sbjct: 508 ISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREAR 567

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
                 +  G  P+ +TY+ +I  Y + G +      + +M  + + P    Y  LI +L
Sbjct: 568 KFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 627

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           C+ G+ + A ++F  M    LVP    Y  L+
Sbjct: 628 CRMGRTQLAYRHFYEMLERGLVPNKYTYTLLI 659



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 3/285 (1%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRK--NMIHDTIAYSLIVYAKVKMRNLESAL 148
           P ++   +L+    +E R ++  +LLK M  +  + + + + Y++++ A +  +      
Sbjct: 229 PSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVI-AGLARKGYLEEA 287

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
               E ++    A+SF Y   I      G +++ + L  EMEN G+ P   T+N +I G 
Sbjct: 288 AELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGL 347

Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
            ++ +IE + +   +M +  LLP    +N ++   C+ GN K+A  +       G +P  
Sbjct: 348 LQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTV 407

Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
           +TY+ LI GY + G+++E  +L  EM  +   P +  YT L+        L    ++F  
Sbjct: 408 LTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDE 467

Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           M S  L P    Y + +   +  G+ +K+  L E ++ EG+   T
Sbjct: 468 MLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDT 512



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 36/260 (13%)

Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK--PYDETFNLLIE 206
            V+ EML+ G   +   Y T + ++ + G+ ++ + L++EME  G    P D T+N++I 
Sbjct: 217 AVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIA 276

Query: 207 GCAKA---------------KRIEESLSYCE-------------------QMMSRKLLPS 232
           G A+                 +   S +Y                     +M +  ++P+
Sbjct: 277 GLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPT 336

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +N MI  L + G  + A          G  P+ ITY+ L+ GY K G  +E L L+ 
Sbjct: 337 VVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFG 396

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           ++    ++PT+  Y  LI   C+ G LEEA +  + M     +P V  Y  L+       
Sbjct: 397 DLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVC 456

Query: 353 NKAKALHLCEEMVSEGLKPS 372
           + A      +EM+S+GL+P 
Sbjct: 457 SLAMTREFFDEMLSKGLRPD 476



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 115/264 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + G + +++++N LI    +    +   R+ + M+E    P+  T   L+        
Sbjct: 398 LRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCS 457

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L    +  D +  K   P      + I   I    I +   L + ++ + +  DT+ Y++
Sbjct: 458 LAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNI 517

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K  NL+ A  +  +M+  G   +   YT  I A+CE G + EA     +M + G
Sbjct: 518 LIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDG 577

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+ ++I    +   +  +  +  +M+   + P+   +N +I  LC  G  + A 
Sbjct: 578 LPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAY 637

Query: 254 GMLTLALDKGFSPNEITYSHLIGG 277
                 L++G  PN+ TY+ LI G
Sbjct: 638 RHFYEMLERGLVPNKYTYTLLIDG 661



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 3/157 (1%)

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           LS   +M S  + P     N+++R L +       + +    L  G  P+ +TY+ L+  
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 278 YAKEGEIQEVLKLYYEMEYKSIS--PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
           ++KEG   ++  L  EME +  S  P    Y  +I+ L + G LEEA +  + M+     
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKA 300

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                Y  L+   L +G   K   L  EM +EG+ P+
Sbjct: 301 SSF-TYNPLITGLLARGFVKKVDDLQLEMENEGIMPT 336


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 139/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  +E  I+    +   + +  +    ++++ ++   +++ +L+    +   M   G
Sbjct: 142 LMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K++ AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P+++TY+ LI G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGS 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPS 415



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 139/320 (43%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P   +  TL++   + G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E +++    L   ML   ++ + + ++ ++    K   ++ A+ +Y++ML +  S + 
Sbjct: 217 CKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLMKEMQRDGYVPSV 416



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 113/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YE+ L+ G+ A+ + +   +  +C+ G+I+ A  +   +   GL+P  
Sbjct: 112 MKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTA 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  +   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIR 343



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++L +  FD    + + G   + +SFNTL++   +    D  +R+   M  +   P+  T
Sbjct: 152 IKLAQSVFDA---ITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ + +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + ++      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E  +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G  K A  +       G  P  ++++ L+ GY + G++ E  +L   
Sbjct: 137 YFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K++ A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 257 VDLAMEIYKQMLSQSLSPD 275


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 149/333 (44%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 122 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 175

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 176 ------------------------------SYNTLMNGYIRLGHLDEGFRLKSAMLASGV 205

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 206 LPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAME 265

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             ++M+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ TY+ LI G  
Sbjct: 266 IYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 325

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++    +    M  ++I     AY +LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 326 KEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 385

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +KG+  K   L +EM   G  PS
Sbjct: 386 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPS 418



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 148/312 (47%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +     + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 117 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 176

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +      P V   + LI  + +E ++++   L   ML
Sbjct: 177 YNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEML 236

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K +I + + ++ ++    K   ++ A+ +Y+ ML +    +   Y T I   C+ G ++
Sbjct: 237 VKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 296

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 297 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALI 356

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  EM+    +
Sbjct: 357 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHA 416

Query: 301 PTLPAYTSLISS 312
           P++  Y  L++ 
Sbjct: 417 PSVVTYNVLMNG 428



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 112/232 (48%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 115 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 174

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++  +LP    ++ +I  LC+      AN +   
Sbjct: 175 VSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDE 234

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y  M  +S+ P L  Y +LI  LC+ G 
Sbjct: 235 MLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 294

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 295 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 346



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 21  TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 80

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 81  ETGFLRDAIECYRLTREHKLWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 139

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G + E  +L   
Sbjct: 140 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSA 199

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    L+P    + +L+  H + G 
Sbjct: 200 MLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGR 259

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + + M+S+ L P 
Sbjct: 260 VDFAMEIYKRMLSQSLLPD 278


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 175/369 (47%), Gaps = 3/369 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           +     + +  E  G +  L + + LI+         L + ++ ++L+   +P+  T+ T
Sbjct: 74  YPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNT 133

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G+++  +   D++  +      +   +LI  + +    +    LL+++   +
Sbjct: 134 LIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHS 193

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ I+ +  K + L  A  VY EM+ +G S +   YTT I  +C  GK++EA 
Sbjct: 194 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAF 253

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAK---AKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            L+ EM+   + P   TF++LI+   K    K ++E++S  E+M  + ++P    +N +I
Sbjct: 254 SLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLI 313

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+  + ++A  +L    + G  P+  +Y+ L+ G  K G ++   + +  +  K   
Sbjct: 314 DGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCH 373

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
             +  Y  +I+ LC+ G   EA      M+    +P    + +++    EK    KA  +
Sbjct: 374 LNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKI 433

Query: 361 CEEMVSEGL 369
             EM++ GL
Sbjct: 434 LREMIARGL 442



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 156/333 (46%), Gaps = 3/333 (0%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           +AF V   + +RGF    I+ NTLI  +            +  ++      ++ +  TLI
Sbjct: 111 LAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLI 170

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK G+ +    +L ++ G    P V++  ++I  + + + + +   +   M+ K + 
Sbjct: 171 NGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGIS 230

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK---IEEA 182
            D + Y+ +++    M  ++ A  +  EM  +  + + + ++  I A  + GK   ++EA
Sbjct: 231 PDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEA 290

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L +EM++  + P   T+N LI+G  K   +E +++  ++M    + P   ++  ++  
Sbjct: 291 MSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDG 350

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G  + A       L KG   N   Y+ +I G  K G   E + L  +ME K   P 
Sbjct: 351 LCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPN 410

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
              + ++I +L +  + ++A+K  + M +  L+
Sbjct: 411 AITFRTIICALSEKDENDKAEKILREMIARGLL 443



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 131/293 (44%), Gaps = 3/293 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P       ++S+L K  +  T + +  +      +P +   + LI     +  I     +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
              +L++    D I  + ++        ++  L  +++++ +GF  +   Y T I   C+
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G+ +    L++++E   +KP    +N +I    K K + ++     +M+ + + P    
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE---IQEVLKLYY 292
           +  +I   C  G  K+A  +L     K  +P+  T+S LI    KEG+   + E + L+ 
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           EM++K++ P +  Y SLI  LC+   LE A    K MK H + P V  Y  L+
Sbjct: 296 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILL 348



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 136/289 (47%), Gaps = 3/289 (1%)

Query: 88  RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
           R  P   +  +++  +++ +R    + L K+     +  D    S+++       ++  A
Sbjct: 53  RPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLA 112

Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
             V+  +LKRGF  ++    T I   C  G+I++      ++   G +    ++  LI G
Sbjct: 113 FSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLING 172

Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
             KA   +       ++    + P    +N +I  LC+      A  + +  + KG SP+
Sbjct: 173 LCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD 232

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK---LEEADK 324
            +TY+ LI G+   G+++E   L  EM+ K+I+P +  ++ LI +L + GK   ++EA  
Sbjct: 233 VVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMS 292

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            F+ MK  +++P +  Y SL+    +  +  +A+ L +EM   G++P  
Sbjct: 293 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDV 341



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 155/355 (43%), Gaps = 11/355 (3%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN ++  + K+ R   V  +++    N   P+  T+  LI+  C    +     +   I 
Sbjct: 61  FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 120

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +   P  I   +LI  +     I++ +    +++ +    D ++Y  ++    K    +
Sbjct: 121 KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETK 180

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +   +  ++       +  +Y T I + C+   + +A  +  EM   G+ P   T+  LI
Sbjct: 181 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 240

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---K 262
            G     +++E+ S   +M  + + P    F+ +I  L + G  K  +  ++L  +   K
Sbjct: 241 HGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHK 300

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              P+ +TY+ LI G  K   ++  + L  EM+   I P + +YT L+  LC+ G+LE A
Sbjct: 301 NMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIA 360

Query: 323 DKYFKIMKSHSLVPGVDI----YESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++F+    H LV G  +    Y  ++    + G   +A+ L  +M  +G  P+ 
Sbjct: 361 KEFFQ----HLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNA 411



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 59/122 (48%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  + + +++ G    + S+  L+  + K  R ++    +QH+L    + N      
Sbjct: 322 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNV 381

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LCK G     +D+  ++ GK C P  I   ++I  + +++  ++   +L+ M+ + 
Sbjct: 382 MINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARG 441

Query: 124 MI 125
           ++
Sbjct: 442 LL 443



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/158 (20%), Positives = 69/158 (43%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           ++ + A  +   ++ +     ++++N+LI  + K+   +    + + M E+   P+  + 
Sbjct: 285 KMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSY 344

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             L+  LCKGG+L+   +    +  K C   V     +I  + +     E M L  +M  
Sbjct: 345 TILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEG 404

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           K  + + I +  I+ A  +    + A  +  EM+ RG 
Sbjct: 405 KGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 158/370 (42%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 103 FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEEILE-CGYPASLYFFN 146

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 147 ILMHRFCKDGDIRIAQSVFDAITKWGLRPSVV---------------------------- 178

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   ML  G   + + Y+  I   C+  KI++A
Sbjct: 179 -------SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDA 231

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 232 NELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA+ ++     KG  P++ITY+ LI G  K+G++    +    M  ++    
Sbjct: 292 LCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLD 351

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YT+LIS LC+ G+  +A+K  + M S  L P    Y  ++    +KG+  K   L +
Sbjct: 352 DVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 411

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 412 EMQRDGHVPS 421



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 3/277 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ +  FD    + + G   S++S+NTL++   +    D  +R+   ML +   P+  T
Sbjct: 158 IRIAQSVFDA---ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYT 214

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 215 YSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G ++
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLD 334

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M     +  D  +  LI G  +  +  ++     +M+S  L P    +  +I
Sbjct: 335 TAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              C+ G+  + + +L      G  P+ +TY+ L+ G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  + +   +  S  +V++  I AY 
Sbjct: 24  TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGLITAYL 83

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 84  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 142

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 143 YFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGR 262

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 263 VDLAMEIYKQMLSQSLSPD 281


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 191/403 (47%), Gaps = 37/403 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V   +++ G   +L+  NT I V  +++R +   R  + M      PN  T   +I 
Sbjct: 264 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 323

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-MI 125
             C   +++  +++LD +  K C P  +   +++  + +E+RI E   L+K+M +++ ++
Sbjct: 324 GYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV 383

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D + Y+ +++   K  + + AL   ++  ++GF  +   Y+  + A C+ G++ EA  L
Sbjct: 384 RDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDL 443

Query: 186 MQEMENAGLKPYD-ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           + EM + G  P D  T+  ++ G  +   ++++    + M +    P+  ++  ++  LC
Sbjct: 444 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLC 503

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G + +A  M+ ++ ++ +SPN ITYS L+ G  KEG++ E   +  EM  K   P   
Sbjct: 504 RTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPV 563

Query: 305 AYTSLISSLCQCGKLEEADKYFK----------IMKSHSLVPG----------------- 337
               L+ SLC+ G+  EA K+ +          ++   +++ G                 
Sbjct: 564 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 623

Query: 338 --------VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                   V  Y +LV    +KG  A+A  L ++M+ +G+ P+
Sbjct: 624 YLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPT 666



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 153/321 (47%), Gaps = 4/321 (1%)

Query: 54  RYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
           R P EA +R ++S   + GQL+  + +L  +      P +++  + I   ++  R+E+ +
Sbjct: 243 RTP-EAFLRVMVS-YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKAL 300

Query: 114 VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY 173
             L+RM    ++ + + Y+ ++     +  +E A+ + ++M  +G   +   Y T +G  
Sbjct: 301 RFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYL 360

Query: 174 CEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           C+  +I E   LM++M +  GL     T+N LI    K    +E+L + +    +     
Sbjct: 361 CKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRID 420

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGF-SPNEITYSHLIGGYAKEGEIQEVLKLY 291
              ++ ++  LC+ G   +A  ++   L KG   P+ +TY+ ++ G+ + GE+ +  KL 
Sbjct: 421 KVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL 480

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
             M      P   +YT+L++ LC+ GK  EA +   + +     P    Y  L+    ++
Sbjct: 481 QIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKE 540

Query: 352 GNKAKALHLCEEMVSEGLKPS 372
           G  ++A  +  EMV +G  P 
Sbjct: 541 GKLSEACDVVREMVLKGFFPG 561



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/346 (21%), Positives = 148/346 (42%), Gaps = 38/346 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRND-LVWRIYQHMLENIRYPNEAT 60
           R+ EV   + +  ++ G     +++NTLIH++TK D  D  +W +     +  R  ++  
Sbjct: 365 RIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRI-DKVG 423

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
              ++ ALCK G++    D+++ +  K  C P                            
Sbjct: 424 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPP---------------------------- 455

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
                  D + Y+ +V    ++  ++ A  + + M   G+  N+  YT  +   C  GK 
Sbjct: 456 -------DVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKS 508

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            EA  +M   E     P   T+++L+ G  K  ++ E+     +M+ +   P     N +
Sbjct: 509 LEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLL 568

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           ++ LC  G   +A   +   L+KG + N + ++ +I G+ +  E+   L +  +M   + 
Sbjct: 569 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 628

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
              +  YT+L+ +L + G++ EA +  K M    + P    Y +++
Sbjct: 629 HADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 674



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 132/305 (43%), Gaps = 47/305 (15%)

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEG----MVLLKRMLRKNMIHDTIAYSLIVYA 137
           DR    R  PMV  +   +L ++ + ++ +G    +VL+KR   + +     A+  ++ +
Sbjct: 201 DRQWRYRHDPMVYYS---MLEVLSKTKMCQGARRVLVLMKR---RGIYRTPEAFLRVMVS 254

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +   L  AL V   M + G   N  +  T I  +    ++E+A   ++ M+  G+ P 
Sbjct: 255 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 314

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS-----------CS------------ 234
             T+N +I G     R+EE++   + M S+  LP            C             
Sbjct: 315 VVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 374

Query: 235 -------------AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
                         +N +I  L +  +A +A   L  A +KGF  +++ YS ++    KE
Sbjct: 375 KMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKE 434

Query: 282 GEIQEVLKLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           G + E   L  EM  K    P +  YT++++  C+ G++++A K  +IM +H   P    
Sbjct: 435 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVS 494

Query: 341 YESLV 345
           Y +L+
Sbjct: 495 YTALL 499



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 140/285 (49%), Gaps = 8/285 (2%)

Query: 2   RLFEV--AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNE 58
           RL EV  A  + + +   G+  + +S+  L++ + ++ ++ L  R   +M E   + PN 
Sbjct: 469 RLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKS-LEAREMMNMSEEQWWSPNS 527

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            T   L+  L K G+L    D++  +  K   P  +    L+  + ++ R  E    ++ 
Sbjct: 528 ITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 587

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
            L K    + + ++ +++   +   L++AL V ++M      A+ F YTT + A  + G+
Sbjct: 588 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGR 647

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-SAFN 237
           I EA  LM++M + G+ P   T+  +I    + +++++ ++  E+M+ R+    C + +N
Sbjct: 648 IAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQ---KCKTIYN 704

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           ++I +LC  G  ++A+ +L   L      +  T   L+ GY K G
Sbjct: 705 QVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIG 749



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 3/248 (1%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           HD + Y  ++    K +  + A  V   M +RG       +   + +Y   G++ +A  +
Sbjct: 208 HDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKV 267

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M+ AG++P     N  I+   +A R+E++L + E+M    ++P+   +N MIR  C+
Sbjct: 268 LTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCD 327

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM--EYKSISPTL 303
               ++A  +L     KG  P++++Y  ++G   KE  I EV  L  +M  E+  +   +
Sbjct: 328 LHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQV 387

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y +LI  L +    +EA  + K  +          Y ++V    ++G  ++A  L  E
Sbjct: 388 -TYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINE 446

Query: 364 MVSEGLKP 371
           M+S+G  P
Sbjct: 447 MLSKGHCP 454


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 183/446 (41%), Gaps = 80/446 (17%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR----IYQHMLENIRYPNEAT 60
           E A+++CR +   G   S   FN +I    K   ND +W+    +++ M ++   P+  T
Sbjct: 334 EKAYELCRQMRDHGLLPSTNEFNMVI----KGLLNDKLWKDAVSLFKEMADS-GIPDAFT 388

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  LC+  +++  +++ ++++     P ++   SL+L       ++E + L   M 
Sbjct: 389 YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMP 448

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    + + Y+ ++   +     + A  +  EM + G S N + Y T I   C  G++ 
Sbjct: 449 GKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVC 508

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP--------- 231
           E   +++  E  G  P   T+N +I G  KA  +  + +  +QM ++ + P         
Sbjct: 509 EVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568

Query: 232 ------SC--------------------SAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
                 SC                    +A+N +I   C+ GN   A  +L L L  G  
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLL 628

Query: 266 PN-----------------------------------EITYSHLIGGYAKEGEIQEVLKL 290
           PN                                     TY+ LI G++K+G +   LKL
Sbjct: 629 PNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKL 688

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           Y EM  K   P    +T+L   LC+ G +++A K    M    + P V +Y  L+  +L 
Sbjct: 689 YSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLR 748

Query: 351 KGNKAKALHLCEEMVSEGLKP-STSY 375
            G   +A  L +EM+   + P  T+Y
Sbjct: 749 NGKLQEAFRLHDEMLERKIMPDDTTY 774



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 172/408 (42%), Gaps = 46/408 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R ++  GF     +FN+++ V+ K  R +    I   +L   +  +     TL+ 
Sbjct: 231 ALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMH 290

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C   +++  +D+ +        P  +  T LI    +E   E+   L ++M    ++ 
Sbjct: 291 GYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            T  +++++   +  +  + A+ +++EM   G   ++F Y   I   C+  KI EA  L 
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLW 409

Query: 187 QEMENAGLKPYDETFNLL-----IEGCAKAKRIEESLSYCEQMMSRKLLP---------- 231
           ++M   G+KPY  T++ L     + GC     ++E++    +M  +   P          
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGC-----MDEAVKLYTEMPGKGFTPNVVTYTTLMK 464

Query: 232 -----------------------SCS--AFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
                                  SC+   +N +I  LC  G   +   ML     +GF P
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVP 524

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
             +TY+ +I G+ K G +     +Y +M  K I P +  YTS I   C+    + A K  
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKML 584

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             ++   L P +  Y SL+    ++GN + AL +   M+ +GL P+ S
Sbjct: 585 NDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNIS 632



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 173/411 (42%), Gaps = 43/411 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G  L    F+ ++    K    D   R++  M  +   P++      I++LCK   
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +L ++      P      S++  +++  R+EE + +   +L        +  + 
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++     R +  AL ++EE L+ G       YT  I    E G  E+A  L ++M + G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA- 252
           L P    FN++I+G    K  ++++S  ++M     +P    +N +I  LC+    ++A 
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREAL 406

Query: 253 ---------------------------NGMLTLALD-------KGFSPNEITYSHLIGGY 278
                                      NG +  A+        KGF+PN +TY+ L+ G+
Sbjct: 407 NLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
             +    +   L  EM+   +S     Y +LI+ LC  G++ E  +  K  ++   VP  
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS----TSYL---CSASTC 382
             Y S++   ++ G    A  + ++M ++G+ P+    TS++   C  S C
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCC 577



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 133/310 (42%), Gaps = 36/310 (11%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ EV  ++ +  E  GF  + +++N++I+   K+      + +YQ M      PN  T 
Sbjct: 506 RVCEVG-EMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTY 564

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            + I   CK       + ML+ +  K   P +    SLI    QE  +   + +L  ML+
Sbjct: 565 TSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLK 624

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ +   Y+  +     ++ +E AL  YE+M+K G   ++  YTT I  + + G +  
Sbjct: 625 DGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTF 684

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L  EM   G  P   TF  L  G  +   I++         +RKLL      +EM R
Sbjct: 685 ALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD---------ARKLL------DEMNR 729

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                             LD    PN + Y+ LI GY + G++QE  +L+ EM  + I P
Sbjct: 730 ------------------LD--IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMP 769

Query: 302 TLPAYTSLIS 311
               Y  L+ 
Sbjct: 770 DDTTYDILVG 779



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 2/222 (0%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE-TFNLLIEGCAKAK 212
           M  RG + ++   T  +          +A  L+ EM   G  P D   F++++  C K  
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKG-HPLDAWMFDVVMRACFKEG 191

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
             ++++   ++M + ++ P     +  I  LC+  +A +A  +L    D GF P + T++
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            ++    K G ++E L +  E+       ++   T+L+   C   ++ +A   F+     
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            LVP    Y  L+    E+G   KA  LC +M   GL PST+
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 59/138 (42%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +++ E A      + + G  L   ++ TLI   +K        ++Y  M+     P+  T
Sbjct: 644 LKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L   LC+ G +     +LD ++     P V++   LI   ++  +++E   L   ML
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763

Query: 121 RKNMIHDTIAYSLIVYAK 138
            + ++ D   Y ++V  K
Sbjct: 764 ERKIMPDDTTYDILVGMK 781


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 159/353 (45%), Gaps = 35/353 (9%)

Query: 22   SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            SL ++N+LI  + K+   ++ W ++  M      P+  T    + AL K G+++   D+ 
Sbjct: 787  SLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLY 846

Query: 82   DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            + +  + C P                                   +TI ++++++  VK 
Sbjct: 847  EEMLFRGCKP-----------------------------------NTITHNIVIFGLVKS 871

Query: 142  RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +L+ A+ +Y +++   FS   + Y   I    + G++EEA    +EM + G  P    +
Sbjct: 872  NSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLY 931

Query: 202  NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            N+L+ G  K   +E +     +M+   + P   +++ M+  LC  G    A         
Sbjct: 932  NILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991

Query: 262  KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
             G  P+ + Y+ +I G  +   ++E L L+ EM  + I+P L  Y +LI +L   G +EE
Sbjct: 992  SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051

Query: 322  ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            A K ++ ++   L P V  Y +L+  H   GN  +A  + ++M+  G +P+T 
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTG 1104



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 170/372 (45%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  E    + + +E  G   ++ +F   I ++ ++ + D  + I + M +    P+  T 
Sbjct: 241 RDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTY 300

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
             LI ALC  G+L    ++  ++      P  +   +L+ +      ++        M  
Sbjct: 301 TVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEA 360

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
              + D + +++++ A  K+  ++ A    + M K+G + N   Y T I       +++E
Sbjct: 361 DGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDE 420

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L   ME+ GL+    T+ L I+   K+    +++   E+M +  ++P+  A N  + 
Sbjct: 421 ALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLY 480

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            L E G  ++A          G +P+ ITY+ L+  Y K G + + +KL  EME     P
Sbjct: 481 SLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDP 540

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +    SLI +L +  +++EA K F+ MK   L P V  Y +L+    ++G   +A  L 
Sbjct: 541 EVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALF 600

Query: 362 EEMVSEGLKPST 373
           + M+++   P+T
Sbjct: 601 KGMIADDCPPNT 612



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 157/358 (43%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + GF L+  S+  LIH++ KS       ++Y+ M+     P+  T   L+ AL K   
Sbjct: 183 MRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRD 242

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++T + +L  +      P +   T  I  + +  +I+E   +LKRM       D + Y++
Sbjct: 243 IETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTV 302

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A      L +A  ++ +M       +   Y T +  + ++G ++       EME  G
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   TF +LI+   K  +++E+    + M  + + P+   +N +I  L       +A 
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +       G      TY   I  Y K GE  + +K + +M+   I P + A  + + SL
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSL 482

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            + G+LEEA ++F  +K   L P    Y  L+  + + G    A+ L  EM   G  P
Sbjct: 483 AEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDP 540



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 144/308 (46%)

Query: 2    RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
            RL E+A+ +   ++  G +  + ++N  +  + KS +   ++ +Y+ ML     PN  T 
Sbjct: 802  RLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITH 861

Query: 62   RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
              +I  L K   L   +D+   +     SP       LI  +++  R+EE     + ML 
Sbjct: 862  NIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLD 921

Query: 122  KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
               + +   Y++++    K  ++E+A  ++  M+K G   +   Y+  +   C  GK+++
Sbjct: 922  YGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDD 981

Query: 182  ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
            A    +E++ +GL P    +NL+I G  +++R+EE+LS  ++M +R + P    +N +I 
Sbjct: 982  ALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALIL 1041

Query: 242  RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             L   G  ++A  M      KG  PN  TY+ LI G++  G       +Y +M      P
Sbjct: 1042 NLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRP 1101

Query: 302  TLPAYTSL 309
                +  L
Sbjct: 1102 NTGTFAQL 1109



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 173/431 (40%), Gaps = 73/431 (16%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G    ++  N+LI  + K+DR D  W+++Q M E    P   T  TL++ L K G+
Sbjct: 533 MEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGR 592

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +Q    +   +    C P  I   +L+  + +   ++  + +L RM   N   D + Y+ 
Sbjct: 593 VQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNT 652

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++Y  +K   +  A  ++ +M K+    +     T +    + G+IE+A  + +E  +  
Sbjct: 653 VIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHV 711

Query: 194 LKPYDETF------NLLIEG-------------------------------CAKAKRIEE 216
               D +F       +LIE                                C   K ++ 
Sbjct: 712 GDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDA 771

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
              + +   S  + PS  A+N +I  L +    + A G+     + G +P+  TY+  + 
Sbjct: 772 YNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLD 831

Query: 277 GYAKEGEIQEVLKLYYEMEYK-----------------------------------SISP 301
              K G+I+E+  LY EM ++                                     SP
Sbjct: 832 ALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSP 891

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
           T   Y  LI  L + G+LEEA ++F+ M  +  +P   +Y  L+    ++G+   A  L 
Sbjct: 892 TPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELF 951

Query: 362 EEMVSEGLKPS 372
             MV EG++P 
Sbjct: 952 RRMVKEGIRPD 962



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 161/357 (45%), Gaps = 5/357 (1%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +++ TL+   +     D +   +  M  +   P+  T   LI ALCK G++      LD 
Sbjct: 333 VTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDV 392

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  +  +P +    +LI  +++  R++E + L   M  +++  +T AY+ I++     ++
Sbjct: 393 MKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSM--ESLGLETTAYTYILFIDYYGKS 450

Query: 144 LES--ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            ES  A+  +E+M   G   N       + +  E G++EEA      ++  GL P   T+
Sbjct: 451 GESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITY 510

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+L+    KA R+++++    +M      P     N +I  L +     +A  M     +
Sbjct: 511 NILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
              +P  +TY+ L+ G  KEG +QE   L+  M      P   ++ +L+  LC+ G+++ 
Sbjct: 571 MKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDL 630

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
           A K    M   +  P V  Y +++   +++     A  L  +M  + + P    LC+
Sbjct: 631 ALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCT 686



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 1/267 (0%)

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           + E  V L++M +   + +  +Y  +++  +K      AL VY  M+  G   +   Y+ 
Sbjct: 173 LREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSA 232

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            + A  +   IE    L+QEME+ GL+P   TF + I    +A +I+E+    ++M    
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAG 292

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P    +  +I  LC  G    A  +          P+ +TY  L+  ++  G++  + 
Sbjct: 293 CGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK 352

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           + + EME     P +  +T LI +LC+ GK++EA     +MK   + P +  Y +L+   
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGL 412

Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSY 375
           L      +AL L   M S GL+ +T+Y
Sbjct: 413 LRLNRLDEALELFNSMESLGLE-TTAY 438



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/404 (17%), Positives = 149/404 (36%), Gaps = 38/404 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++   +E  G   +  ++   I    KS  +    + ++ M  N   PN       + 
Sbjct: 421 ALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLY 480

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +L + G+L+   +  + +     +P  I    L+    +  R+++ + LL  M       
Sbjct: 481 SLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDP 540

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + +  + ++    K   ++ A  +++ M +   +     Y T +    + G+++EA  L 
Sbjct: 541 EVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALF 600

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + M      P   +FN L++   K   ++ +L    +M      P    +N +I  L + 
Sbjct: 601 KGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKE 660

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY---------- 296
                A  +    + K   P+ +T   L+ G  K+G I++  ++  E  +          
Sbjct: 661 NRVNYAFWLFH-QMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSF 719

Query: 297 --------------------------KSISPTLPAYTSLISSLCQCGKLEEA-DKYFKIM 329
                                      +I         L+  LC+ GK  +A + + K+ 
Sbjct: 720 WEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLT 779

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           KS  + P ++ Y SL+   L+      A  L  +M + G  P  
Sbjct: 780 KSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 163/371 (43%), Gaps = 16/371 (4%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G  L+ ++ +     +  + + D  + I   M+     P+++T   +I  LC   +++  
Sbjct: 413 GVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKA 472

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             + + +      P V   T LI    +   I++       MLR N   + + Y+ +++A
Sbjct: 473 FLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHA 532

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-------- 189
            +K R +  A  ++E ML  G   N   YT  I  +C+ G+I++A  +   M        
Sbjct: 533 YLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSD 592

Query: 190 --------ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
                   +N    P   T+  L++G  KA R+EE+    + M      P+   ++ +I 
Sbjct: 593 IDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALID 652

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G  + A  +     ++G+ PN  TYS LI    KE  +  VLK+  +M   S +P
Sbjct: 653 GFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTP 712

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  YT +I  LC+ GK EEA +    M+     P V  Y +++    + G   + L L 
Sbjct: 713 NVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELY 772

Query: 362 EEMVSEGLKPS 372
            +M S+G  P+
Sbjct: 773 RDMCSKGCAPN 783



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 160/378 (42%), Gaps = 51/378 (13%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ AF++   +  +GF     +++ +I  +  + + +  + +++ M +N   P+  T   
Sbjct: 434 FDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTI 493

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G +Q   +  D +    C+P V+  TSLI   ++  ++ +   L + ML + 
Sbjct: 494 LIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEG 553

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVY-------------------------------- 151
              + + Y+ ++    K   ++ A  +Y                                
Sbjct: 554 SKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYG 613

Query: 152 -------------------EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
                              + M   G   N  VY   I  +C+ GK+E A  +  +M   
Sbjct: 614 ALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSER 673

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G  P   T++ LI    K KR++  L    +M+     P+   + +MI  LC+ G  ++A
Sbjct: 674 GYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEA 733

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             ++    + G  PN ITY+ +I G+ K G+I++ L+LY +M  K  +P    Y  LI+ 
Sbjct: 734 YRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINH 793

Query: 313 LCQCGKLEEADKYFKIMK 330
            C  G L+EA +    MK
Sbjct: 794 CCSTGLLDEAHRLLDEMK 811



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 171/377 (45%), Gaps = 9/377 (2%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           ++ VA +    L+  G+  S  ++N LI V  ++D+ D  + +++ M  +    +  T+ 
Sbjct: 185 MWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLG 244

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
               +LCK G+    + +L++   +   P  +    ++  + +    +E M +L RM   
Sbjct: 245 CFAYSLCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSI 301

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           + I + + Y +++   +    L     +   M+  G   N  ++ + + AYC+      A
Sbjct: 302 SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYA 361

Query: 183 NCLMQEMENAGLKPYDETFNLLI------EGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
             L ++M   G +P    +N+ I      E    +  +E +     +M+   ++ +    
Sbjct: 362 YKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNV 421

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           +   R LC  G   +A  ++   + KGF P++ TYS +IG      ++++   L+ EM+ 
Sbjct: 422 SNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKK 481

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
             I P++  YT LI S C+ G +++A  +F  M   +  P V  Y SL+  +L+      
Sbjct: 482 NGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFD 541

Query: 357 ALHLCEEMVSEGLKPST 373
           A  L E M+ EG KP+ 
Sbjct: 542 ANKLFEMMLLEGSKPNV 558



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 171/415 (41%), Gaps = 60/415 (14%)

Query: 7   AFDVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR--------- 54
            FD  +  E     G   +++++  LI    K+ + D   +IY  M  +I          
Sbjct: 539 VFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFK 598

Query: 55  -------YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE 107
                   PN  T   L+  LCK  +++   ++LD +    C P  IV  +LI    +  
Sbjct: 599 LDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTG 658

Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
           ++E    +  +M  +    +   YS ++ +  K + L+  L V  +ML+   + N  +YT
Sbjct: 659 KLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYT 718

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
             I   C+ GK EEA  LM +ME  G  P   T+  +I+G  K  +IE+ L     M S+
Sbjct: 719 DMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSK 778

Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLT--------------LALDKGFS-------- 265
              P+   +  +I   C  G   +A+ +L                 + +GF+        
Sbjct: 779 GCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIG 838

Query: 266 -----------PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA-----YTSL 309
                      P E  Y  LI  + K G ++  L L  E+   S SP+L       YTSL
Sbjct: 839 LLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEI---SSSPSLAVANKYLYTSL 895

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           I SL    K+++A + +  M + ++VP +  +  L+      G   +AL L + +
Sbjct: 896 IESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 111/285 (38%), Gaps = 70/285 (24%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A +V   + +RG+  +L ++++LI+ + K  R DLV ++   MLEN   PN      
Sbjct: 660 LENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTD 719

Query: 64  LISALCKGGQLQ-------------------TYVDMLD----------------RIHGKR 88
           +I  LCK G+ +                   TY  M+D                 +  K 
Sbjct: 720 MIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG 779

Query: 89  CSPMVIVNTSLI------------LRIIQE-------------ERIEEG--------MVL 115
           C+P  I    LI             R++ E              +I EG        + L
Sbjct: 780 CAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGL 839

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG--FSANSFVYTTFIGAY 173
           L  +     +     Y +++   +K   LE AL + EE+        AN ++YT+ I + 
Sbjct: 840 LDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESL 899

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
               K+++A  L   M N  + P   TF  LI+G  +  + +E+L
Sbjct: 900 SHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEAL 944


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 139/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              + M+S+ L P    +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y+ ML +  S + 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 111/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y  M  +S+SP L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD       R    S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDAITKWSLRP---SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +          P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + + M+S+ L P 
Sbjct: 257 VDLAMEIYKLMLSQSLSPD 275


>gi|326513918|dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 459

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 131/282 (46%), Gaps = 1/282 (0%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMV-LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
           P+     S ++      R+ E  V +  R+        T  Y+ ++ A     N   A  
Sbjct: 144 PLSPATFSAVISSYGHSRLAEQAVEVFNRLPHFGCPQTTEVYNALLDALCANGNFAGAYK 203

Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
           +   M ++G + +   ++T + A+C  GK+ EA   + +M   G +P     +LL++G  
Sbjct: 204 LLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMATRGFRPPVRGRDLLVDGLV 263

Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
           +A R+EE+ ++  ++    +LP  + FN + + LC+ G+ + A G+L  A  +G  P+  
Sbjct: 264 RAGRLEEAKAFALRITKEGVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRGMCPDIS 323

Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
           TY  ++   AK G I+E  +L+Y        P    Y +++ +LC+ G+  +A  +F  M
Sbjct: 324 TYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADAFAFFGDM 383

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           KS    P   +Y  LV + +  G    A +   EM   G  P
Sbjct: 384 KSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLLEMSEAGFAP 425



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/323 (20%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL E A +V   L   G   +   +N L+  +  +      +++ + M      P+ AT 
Sbjct: 161 RLAEQAVEVFNRLPHFGCPQTTEVYNALLDALCANGNFAGAYKLLRRMARKGVAPDRATF 220

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL+ A C  G+L+     LD +  +   P V     L+  +++  R+EE      R+ +
Sbjct: 221 STLVDAWCASGKLREAQAFLDDMATRGFRPPVRGRDLLVDGLVRAGRLEEAKAFALRITK 280

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + ++ D                                      + +   A C+ G +E 
Sbjct: 281 EGVLPDVA-----------------------------------TFNSLAQALCDAGDVEF 305

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L+ +  + G+ P   T+ +++   AKA RIEE+       +     P  S +  +++
Sbjct: 306 AVGLLADASSRGMCPDISTYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAAIVK 365

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+ G    A         KG  PN   Y  L+    + G   +      EM     +P
Sbjct: 366 ALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLLEMSEAGFAP 425

Query: 302 TLPAYTSLISSLCQCGKLEEADK 324
             P +  ++  L   GK + A +
Sbjct: 426 RAPTFNVVVDGLRHLGKHDLARR 448



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 81/188 (43%)

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   GL     TF+ +I     ++  E+++    ++       +   +N ++  LC  
Sbjct: 136 SDMRALGLPLSPATFSAVISSYGHSRLAEQAVEVFNRLPHFGCPQTTEVYNALLDALCAN 195

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           GN   A  +L     KG +P+  T+S L+  +   G+++E      +M  +   P +   
Sbjct: 196 GNFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMATRGFRPPVRGR 255

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+  L + G+LEEA  +   +    ++P V  + SL     + G+   A+ L  +  S
Sbjct: 256 DLLVDGLVRAGRLEEAKAFALRITKEGVLPDVATFNSLAQALCDAGDVEFAVGLLADASS 315

Query: 367 EGLKPSTS 374
            G+ P  S
Sbjct: 316 RGMCPDIS 323


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 39/397 (9%)

Query: 15  EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL 74
           ++R F     ++  LIH + ++     +W+  Q M+ +      A +  ++  L K   +
Sbjct: 116 KRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMV 175

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSL 133
              + +  +I G++C P      S+IL ++QE   E+   L   M  + + + DT+ YS 
Sbjct: 176 NKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSA 235

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  K+   +SA+ +++EM + G    + +YTT +G Y + G++E+A  L+QEM+  G
Sbjct: 236 LIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295

Query: 194 L---------------------KPYDETFNLLIEGC--------------AKAKRIEESL 218
                                 + Y    N+L EGC               KA R+ +++
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAI 355

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCEC-GNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              E+M S +  P+   +N +I+ L E    A +A        + G  P+  TYS LI G
Sbjct: 356 KLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDG 415

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
           + K   +++ L L  EM+ K  +P   AY SLI++L +  + E A++ F+ ++ +     
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSS 475

Query: 338 VDIYESLVGIHLEK-GNKAKALHLCEEMVSEGLKPST 373
             +Y  ++  HL K G  ++A+ L  EM   G  P  
Sbjct: 476 ARVYAVMIK-HLGKCGRLSEAVDLFNEMKKLGCNPDV 511



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 172/343 (50%), Gaps = 3/343 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  + + ++++G +L++ ++  LI  V K+ + +  + I+ +ML+    P+   I  L
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEE-RIEEGMVLLKRMLRKN 123
           I+ L K G+L   + + + +   +C+P V+   ++I  + + + R  E  +  ++M    
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++  +  YS+++    K   +E AL++ EEM ++GF+     Y + I A  +  + E AN
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461

Query: 184 CLMQEM-ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
            L QE+ EN G       + ++I+   K  R+ E++    +M      P   A+N ++  
Sbjct: 462 ELFQELRENCGYSSA-RVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSG 520

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           +   G   +A+ +L    + G +P+  +++ ++ G+A+ G  +  ++++  M+   I P 
Sbjct: 521 MVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPD 580

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + +Y +++  L + G  EEA K  K M S      +  Y S++
Sbjct: 581 VVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 163/352 (46%), Gaps = 3/352 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++++ LI    K  R+D    ++  M EN  +P      T++    K G+++  + ++  
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C+  V   T LI  + +  ++EE   +   ML++    D +  + ++    K   
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEY-GKIEEANCLMQEMENAGLKPYDETFN 202
           L  A+ ++EEM     + N   Y T I A  E   +  EA    ++M+  G+ P   T++
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT-LALD 261
           +LI+G  K  R+E++L   E+M  +   P  +A+  +I  L +    + AN +   L  +
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELREN 470

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G+S   + Y+ +I    K G + E + L+ EM+    +P + AY +L+S + + G  +E
Sbjct: 471 CGYSSARV-YAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDE 529

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A    + M+ +   P ++ +  ++      G    A+ +   M +  +KP  
Sbjct: 530 AHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDV 581



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 125/261 (47%), Gaps = 3/261 (1%)

Query: 22  SLISFNTLIHVVTKSD-RNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           +++++NT+I  + +S  R    +  Y+ M EN   P+  T   LI   CK  +++  + +
Sbjct: 369 NVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLL 428

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AYSLIVYAKV 139
           L+ +  K  +P      SLI  + + +R E    L +  LR+N  + +   Y++++    
Sbjct: 429 LEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE-LRENCGYSSARVYAVMIKHLG 487

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K   L  A+ ++ EM K G + + + Y   +      G  +EA+ L++ ME  G  P   
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
           + N+++ G A+    + ++    +M + K+ P   ++N ++  L   G  ++A  ++   
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607

Query: 260 LDKGFSPNEITYSHLIGGYAK 280
             KGF  + ITYS ++    K
Sbjct: 608 NSKGFEYDLITYSSILEAVGK 628


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 159/321 (49%), Gaps = 1/321 (0%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +   G   + +++N LIH  + S       R+++ M  ++  P+     + ++ALC
Sbjct: 210 VLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALC 269

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G+++   D+ D +  K   P VI   +L+        I     L   M+ + ++ D  
Sbjct: 270 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 329

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            ++ ++ A  ++  ++ +L+++E+M K+G + +   ++T I A+C  G++++A      M
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-SAFNEMIRRLCECGN 248
            + G+ P    ++ LI+G    + + ++      M+S+ + P C   F  +I  LC+ G 
Sbjct: 390 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 449

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +   ++ L +  G  PN IT++ L+ GY   G ++E + L   ME   + P +  Y +
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 509

Query: 309 LISSLCQCGKLEEADKYFKIM 329
           L+   C+ G++++A   F+ M
Sbjct: 510 LVDGYCKHGRIDDALTLFRDM 530



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 151/326 (46%), Gaps = 35/326 (10%)

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           +DR      +P +     LI    +  R + G+ +  R+LR  +  D  +Y+ ++    K
Sbjct: 106 MDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSK 165

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              ++ A  ++ +M ++G   N   Y++ I   C+  ++++A  ++++M  AG++P + T
Sbjct: 166 EGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMT 225

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N LI G + +   +ES+   ++M S  L+P     N  +  LC+ G  K+A  +    +
Sbjct: 226 YNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMV 285

Query: 261 DKGFSPNEITYSHLIGGYAKEGEI-----------------------------------Q 285
            KG  P+ I+Y  L+ GYA  G I                                    
Sbjct: 286 LKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMD 345

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + L ++ +M  + ++P +  ++++IS+ C+ G+L++A + F  M    + P   +Y  L+
Sbjct: 346 KSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLI 405

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKP 371
                + +  KA  L  +M+S+G+ P
Sbjct: 406 QGQCNRRDLVKAKELISDMLSKGIPP 431



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 167/362 (46%), Gaps = 1/362 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G +  +I+F+T+I    +  R D     + HM++    P+ A    LI   C    
Sbjct: 354 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 413

Query: 74  LQTYVDMLDRIHGKRCSPMVI-VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           L    +++  +  K   P  I   TS+I  + +E R+ EG  ++  ++      + I ++
Sbjct: 414 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 473

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            +V     + N++ A+ + + M   G   + + Y T +  YC++G+I++A  L ++M + 
Sbjct: 474 SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 533

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            +     ++N+++ G  +A+R   +     +M+   +  S   +  ++  LC      +A
Sbjct: 534 RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 593

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           N +L          + +T++ +I    K G  QE  +L+  +    + PT+  Y  +I++
Sbjct: 594 NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITN 653

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L +    E+AD  F  M+  S  P   I   ++ + L KG  AKA +   ++  +G+ P 
Sbjct: 654 LIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 713

Query: 373 TS 374
            +
Sbjct: 714 AT 715



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 137/304 (45%), Gaps = 3/304 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F ++I+ + K  R      +   ++   + PN  T  +L+   C  G ++  V +LD + 
Sbjct: 437 FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 496

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                P +    +L+    +  RI++ + L + ML K +   +++Y++I++   + R   
Sbjct: 497 SVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 556

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  ++ EM++ G + +   Y T +G  C     +EAN L++++ +  +K    TFN++I
Sbjct: 557 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVI 616

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
               K  R +E+      + +  L+P+   +  MI  L +  + + A+ + +       +
Sbjct: 617 RAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCT 676

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+    + +I     +GE+ +      +++ K I P     + LI      GK  E   Y
Sbjct: 677 PDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYRE---Y 733

Query: 326 FKIM 329
            K++
Sbjct: 734 IKLL 737



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/287 (18%), Positives = 107/287 (37%), Gaps = 70/287 (24%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +  +  +L+ +S+N ++H + ++ R  +   ++  M+E+    +  T  T++ 
Sbjct: 523 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 582

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+                  C+                   +E  +LL+++   N+  
Sbjct: 583 GLCR----------------NNCT-------------------DEANMLLEKLFSMNVKF 607

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + +++++ A  K+                                   G+ +EA  L 
Sbjct: 608 DILTFNIVIRAMFKV-----------------------------------GRRQEAKELF 632

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             +   GL P   T+ ++I    K +  E++ +    M      P     NE+IR L   
Sbjct: 633 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 692

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           G   +A   L+    KG  P   T S LI  ++  G+ +E +KL  E
Sbjct: 693 GEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 169/348 (48%), Gaps = 5/348 (1%)

Query: 1   MRLFEVAF--DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNE 58
           +RL E+A   +V   ++ RG   +++SFNT+I  + ++   D    +++ M E    P+ 
Sbjct: 251 VRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV 310

Query: 59  ATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
            T   LI  LC+ G+++    + +++ G+   P  +V T LI    ++   E  + L + 
Sbjct: 311 YTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHRE 370

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           M  + +  D + Y+ IV    + R+L+SA  +  EM   G   ++  YTT I  YC+  +
Sbjct: 371 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 430

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           ++ A  + Q M   G+   + T+  LI G +KA R  ++     +MM   L P  + +  
Sbjct: 431 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 490

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I   C  G+ K    +L    +KG  P  +TY+ ++ G+ K G+++    L   M    
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
           +SP    Y  L+   C+ GK+ + +   ++  +   VP + +Y S+VG
Sbjct: 551 VSPDDITYNILLDGHCKHGKVTDIE---ELKSAKGTVPDLGVYTSIVG 595



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 120/258 (46%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           +   M  + +    ++++ ++    +  +L+ A  ++  M + G + + + Y   I   C
Sbjct: 262 VFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLC 321

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G+IE+A  + ++M   G+KP    F +LI+   K    E  L    +M  R + P   
Sbjct: 322 RVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAV 381

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N ++  LC   + K A+G++      G  P+ +TY+ LI GY KE E+   +++   M
Sbjct: 382 TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 441

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             + +      YT+LIS L + G+  +A++    M    L P    Y  ++     KG+ 
Sbjct: 442 VAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDV 501

Query: 355 AKALHLCEEMVSEGLKPS 372
              L L +EM ++G KP 
Sbjct: 502 KTGLRLLKEMQNKGRKPG 519



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 145/327 (44%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           Y  +L+    P       L+  L + G+L +  ++ D +  +     V+   ++I  + +
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
              ++    L +RM    +  D   Y  ++    ++  +E A  V+E+M  RG   N+ V
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 347

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           +T  I A+C+ G  E    L +EM   G++P   T+N ++ G  +A+ ++ +     +M 
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           S  L P    +  +I   C+      A  +    + +G   +E+TY+ LI G +K G   
Sbjct: 408 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 467

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           +  ++  EM    + P    YT +I + C+ G ++   +  K M++    PGV  Y  ++
Sbjct: 468 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 527

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPS 372
               + G    A  L   M++ G+ P 
Sbjct: 528 NGFCKLGQMKNADMLLNAMINIGVSPD 554



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 9/250 (3%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           +++++   V++  L SA  V++EM  RG       + T I   C  G ++ A  L + M 
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            AG+ P   T+  LI+G  +  RIE++    E+M  R + P+   F  +I   C+ G+A+
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
               +     ++G  P+ +TY+ ++ G  +  +++    +  EM    + P    YT+LI
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 422

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDI----YESLVGIHLEKGNKAKALHLCEEMVS 366
              C   K EE D   +I K + +  GV +    Y +L+    + G  A A  +  EM+ 
Sbjct: 423 DGYC---KEEELDMAMEI-KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 478

Query: 367 EGLKP-STSY 375
            GL+P +T+Y
Sbjct: 479 AGLEPDNTTY 488



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 107/223 (47%)

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
           A   Y ++L  G    + ++   +      G++  A  +  EM++ G++    +FN +I 
Sbjct: 224 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 283

Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
           G  +A  ++ + +   +M    + P    +  +I+ LC  G  + A G+      +G  P
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           N + ++ LI  + K+G+ + +L+L+ EM  + + P    Y ++++ LC+   L+ A    
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             M+S  L P    Y +L+  + ++     A+ + + MV+EG+
Sbjct: 404 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGV 446



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 3/219 (1%)

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           L+RG        T+  G    +    EA     ++ +AGL P  + FN+L+    +   +
Sbjct: 200 LRRGIRLEP---TSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGEL 256

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
             + +  ++M SR +  +  +FN MI  +C  G+   A  +     + G +P+  TY  L
Sbjct: 257 ASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGAL 316

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G  + G I++   ++ +M  + + P    +T LI + C+ G  E   +  + M+   +
Sbjct: 317 IQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGV 376

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            P    Y ++V       +   A  +  EM S GL+P T
Sbjct: 377 RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDT 415


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 171/377 (45%), Gaps = 3/377 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRT 63
           E+A      L + G  + +I  N L+    ++ R D    I  H    +   P+  +   
Sbjct: 132 ELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSI 191

Query: 64  LISALCKGGQLQTYVDMLDRIH--GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
           L+ +LC  G+     D+L  +   G  CSP V+  T++I    +E  + +   L K M++
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQ 251

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  D + YS +V+A  K R +  A     +M+ +G   +++ Y   I  Y   G+ +E
Sbjct: 252 RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 311

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  + +EM    + P   T N+L+    K  +I+E+    + M  +   P   ++  M+ 
Sbjct: 312 AVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLN 371

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                G       +  L L  G +P+  T+S LI  YA  G + + + ++ EM    + P
Sbjct: 372 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKP 431

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  YT++I++LC+ GK+++A + F  M    + P    Y  L+      G+  KA  L 
Sbjct: 432 DVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 491

Query: 362 EEMVSEGLKPSTSYLCS 378
            E+++ G++    +  S
Sbjct: 492 LEIMNNGMRLDIVFFSS 508



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 163/358 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R +  +G      ++N LI+  + + +     R+++ M  +   P+  T+  L+ +LCK 
Sbjct: 282 RQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKY 341

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+++   D+ D +  K  +P V     ++     +  + +   L   ML   +  D   +
Sbjct: 342 GKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 401

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S+++ A      L+ A++++ EM   G   +   YTT I A C  GK+++A     +M +
Sbjct: 402 SVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMID 461

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G+ P    ++ LI+G      + ++     ++M+  +      F+ +I  LC+ G    
Sbjct: 462 QGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMD 521

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +  L ++ G  P+ + YS L+ GY   G++++ L+++  M    I P +  Y +L++
Sbjct: 522 AQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVN 581

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             C+ G+++E    F+ M    + P   +Y  ++      G    A     EM   G+
Sbjct: 582 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGI 639



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/367 (22%), Positives = 167/367 (45%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A D+ + + QRG    L+++++++H + K+          + M+     P+  T   LI 
Sbjct: 242 ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIY 301

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                GQ +  V +   +      P V+    L+  + +  +I+E   +   M  K    
Sbjct: 302 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 361

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D  +Y +++        L     +++ ML  G + + + ++  I AY   G +++A  + 
Sbjct: 362 DVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIF 421

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM + G+KP   T+  +I    +  ++++++    QM+ + + P   A++ +I+  C  
Sbjct: 422 NEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 481

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G+  +A  ++   ++ G   + + +S +I    K G I +   ++         P    Y
Sbjct: 482 GSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVY 541

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           + L+   C  GK+E+A + F  M S  + P V +Y +LV  + + G   + L L  EM+ 
Sbjct: 542 SMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQ 601

Query: 367 EGLKPST 373
           +G+KPST
Sbjct: 602 KGIKPST 608



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 168/369 (45%), Gaps = 2/369 (0%)

Query: 7   AFDVCRYLEQRGF--SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           A D+ R + + G   S  ++++ T+I    K    +    +++ M++    P+  T  ++
Sbjct: 205 ADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 264

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           + ALCK   +      L ++  K   P      +LI       + +E + + K M R ++
Sbjct: 265 VHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 324

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D +  ++++ +  K   ++ A  V++ M  +G + + F Y   +  Y   G + +   
Sbjct: 325 LPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTD 384

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L   M   G+ P   TF++LI+  A    +++++    +M    + P    +  +I  LC
Sbjct: 385 LFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALC 444

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
             G    A       +D+G +P++  Y  LI G+   G + +  +L  E+    +   + 
Sbjct: 445 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIV 504

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            ++S+I++LC+ G++ +A   F +  +    P   +Y  L+  +   G   KAL + + M
Sbjct: 505 FFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 564

Query: 365 VSEGLKPST 373
           VS G++P+ 
Sbjct: 565 VSAGIEPNV 573



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 146/321 (45%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +  + +F+ LI         D    I+  M ++   P+  T  T+I+ALC+ G++   
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           ++  +++  +  +P       LI        + +   L+  ++   M  D + +S I+  
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINN 512

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  +  A  +++  +  G   ++ VY+  +  YC  GK+E+A  +   M +AG++P 
Sbjct: 513 LCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
              +  L+ G  K  RI+E LS   +M+ + + PS   +N +I  L   G    A     
Sbjct: 573 VVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFH 632

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + G + N+ TY+ ++ G+ K     E + L+ E+   ++   +    ++I+ + Q  
Sbjct: 633 EMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTR 692

Query: 318 KLEEADKYFKIMKSHSLVPGV 338
           ++EEA   F  +    LVP V
Sbjct: 693 RVEEAKDLFASISRSGLVPCV 713



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 38/280 (13%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEM 189
           Y++++    +    E AL  + ++L+ G   +  +    +  +CE  + +EA + L+   
Sbjct: 118 YAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRT 177

Query: 190 ENAGLKP--------------------YDETFNLLIEGCA-----------------KAK 212
              G  P                     D+   ++ EG A                 K  
Sbjct: 178 PELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEG 237

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
            + ++    ++M+ R + P    ++ ++  LC+     +A   L   ++KG  P+  TY+
Sbjct: 238 DVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYN 297

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
           +LI GY+  G+ +E ++++ EM   SI P +     L+ SLC+ GK++EA   F  M   
Sbjct: 298 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMK 357

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              P V  Y+ ++  +  KG       L + M+ +G+ P 
Sbjct: 358 GQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 397



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 107/223 (47%), Gaps = 3/223 (1%)

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
           R  S  S  Y   +       + E A     ++   GL+      N L++G  +AKR +E
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 217 SLS-YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF--SPNEITYSH 273
           +L     +      +P   +++ +++ LC+ G + QA+ +L +  + G   SP+ + Y+ 
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           +I  + KEG++ +   L+ EM  + I P L  Y+S++ +LC+   + +A+ + + M +  
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           ++P    Y +L+  +   G   +A+ + +EM    + P    L
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 331



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/366 (18%), Positives = 154/366 (42%), Gaps = 2/366 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIH-VVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           A DV   +  +G +  + S+  +++   TK    D+   ++  ML +   P+  T   LI
Sbjct: 347 ARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMT-DLFDLMLGDGIAPDIYTFSVLI 405

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
            A    G L   + + + +      P V+  T++I  + +  ++++ M    +M+ + + 
Sbjct: 406 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 465

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D  AY  ++       +L  A  +  E++  G   +   +++ I   C+ G+I +A  +
Sbjct: 466 PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNI 525

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
                N G  P    +++L++G     ++E++L   + M+S  + P+   +  ++   C+
Sbjct: 526 FDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCK 585

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G   +   +    L KG  P+ I Y+ +I G    G        ++EM    I+     
Sbjct: 586 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCT 645

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  ++    +    +EA   FK +++ ++   +    +++    +     +A  L   + 
Sbjct: 646 YNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 705

Query: 366 SEGLKP 371
             GL P
Sbjct: 706 RSGLVP 711


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 176/406 (43%), Gaps = 35/406 (8%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           +FE    V  Y+ ++G S+   S    +    K  R DL    ++ M+++       ++ 
Sbjct: 150 MFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLT 209

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            ++  LC+ G+++    ++    GK   P      ++I   ++         +LK M + 
Sbjct: 210 IVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKD 269

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            ++++ + Y+L++   VK   +     +++EM +RG  ++  VYT+ I   C  G I+ A
Sbjct: 270 GVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRA 329

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L  E+   GL P   T+  LI+G  K   +  +     +M S+ +  +   FN +I  
Sbjct: 330 FLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLING 389

Query: 243 LCECGNAKQANGMLTLALDKGFSPN----------------------------------- 267
            C  G   +A+ +  +   KGF  +                                   
Sbjct: 390 YCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLS 449

Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            ++Y++LI  Y KEG ++E  +L+ EM  K + P    Y  +I + C+ GK++EA K + 
Sbjct: 450 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWA 509

Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            MK++ + P    Y SL+       N  +A+ L  EM  +GL  ++
Sbjct: 510 NMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNS 555



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 157/352 (44%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G      ++NT+I+   K      V +I + M ++    N+ T   LI    K G++  
Sbjct: 234 KGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMND 293

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
              + D +  +     + V TSLI    ++  I+   +L   +  K ++  +  Y  ++ 
Sbjct: 294 VEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALID 353

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K+  + +A ++  EM  +G +    V+ T I  YC  G I+EA+ +   ME  G + 
Sbjct: 354 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQA 413

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T N +     + KR +E+  +  +MM   +  S  ++  +I   C+ GN ++A  + 
Sbjct: 414 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLF 473

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
                K   PN ITY+ +I  Y K+G+++E  KL+  M+   + P    YTSLI   C  
Sbjct: 474 VEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIA 533

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             ++EA + F  M    L      Y  ++    + G   +A  L +E+  +G
Sbjct: 534 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKG 585



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 153/345 (44%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R F     + + +++ G   + +++  LI +  K+ + + V +++  M E     +    
Sbjct: 254 RDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVY 313

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +LIS  C+ G ++    + D +  K   P      +LI  + +   +    +L+  M  
Sbjct: 314 TSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQS 373

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           K +    + ++ ++    +   ++ A ++Y+ M K+GF A+ F   T    +    + +E
Sbjct: 374 KGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDE 433

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A   +  M   G++    ++  LI+   K   +EE+     +M S+++ P+   +N MI 
Sbjct: 434 AKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIY 493

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
             C+ G  K+A  +       G  P+  TY+ LI G      + E ++L+ EM  K +  
Sbjct: 494 AYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQ 553

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
               YT +IS L + GK +EA   +  +K         +Y +L+G
Sbjct: 554 NSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIG 598



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 137/313 (43%), Gaps = 3/313 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M   E  FD  R   +RG    +  + +LI    +       + ++  + E    P+  T
Sbjct: 291 MNDVEKLFDEMR---ERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHT 347

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  +CK G++     +++ +  K  +   +V  +LI    ++  I+E  ++   M 
Sbjct: 348 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVME 407

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
           +K    D    + I     +++  + A      M++ G   ++  YT  I  YC+ G +E
Sbjct: 408 KKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVE 467

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L  EM +  ++P   T+N++I    K  +++E+      M +  + P    +  +I
Sbjct: 468 EAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLI 527

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C   N  +A  + +    KG   N +TY+ +I G +K G+  E   LY E++ K  +
Sbjct: 528 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYT 587

Query: 301 PTLPAYTSLISSL 313
                YT+LI S+
Sbjct: 588 IDNKVYTALIGSM 600



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 109/239 (45%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           + L+    V     E  L V++ M+K+G S +      F+ A  +  +I+      + M 
Sbjct: 138 FDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMV 197

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           ++G+K    +  +++EG  +   +E+S    ++   + + P    +N +I    +  +  
Sbjct: 198 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFS 257

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
               +L +    G   N++TY+ LI    K G++ +V KL+ EM  + I   +  YTSLI
Sbjct: 258 GVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLI 317

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           S  C+ G ++ A   F  +    L+P    Y +L+    + G    A  L  EM S+G+
Sbjct: 318 SWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGV 376



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 90/202 (44%)

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
            Y + G  EE   +   M   GL   + +  + +    K +RI+  L +  +M+   +  
Sbjct: 144 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKI 203

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
           +  +   ++  LC  G  +++  ++     KG  P   TY+ +I  Y K  +   V K+ 
Sbjct: 204 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKIL 263

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
             M+   +      YT LI    + GK+ + +K F  M+   +   + +Y SL+  +  K
Sbjct: 264 KVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRK 323

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           GN  +A  L +E+  +GL PS+
Sbjct: 324 GNIKRAFLLFDELTEKGLLPSS 345



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/286 (19%), Positives = 122/286 (42%), Gaps = 1/286 (0%)

Query: 98  SLILRI-IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
            L+ R+ +     EEG+ +   M++K +  D  +  + + A  K R ++  L  +  M+ 
Sbjct: 139 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVD 198

Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
            G     +  T  +   C  G++E++  L++E    G+KP   T+N +I    K +    
Sbjct: 199 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSG 258

Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
                + M    ++ +   +  +I    + G       +     ++G   +   Y+ LI 
Sbjct: 259 VEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLIS 318

Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              ++G I+    L+ E+  K + P+   Y +LI  +C+ G++  A+     M+S  +  
Sbjct: 319 WNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 378

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
              ++ +L+  +  KG   +A  + + M  +G +       + ++C
Sbjct: 379 TQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASC 424


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 168/367 (45%), Gaps = 10/367 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L+  G+  S  ++N LI V  ++D+ D  + + + ML      +  T+     +LCKGG+
Sbjct: 202 LKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGK 261

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +   D++D    +   P  +    ++  + +    EE M +L RM   + I + + Y +
Sbjct: 262 CREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRI 319

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++   ++   L     +   M+  G   N  ++ + I AYC+      A  L ++M   G
Sbjct: 320 LLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG 379

Query: 194 LKPYDETFNLLIEG-CAKAKRIEESL------SYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +P    +N+ I   C+  ++    +      +Y E +    +L   +  N   R LC  
Sbjct: 380 CQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSN-FARCLCGA 438

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   QA  ++   + KGF P++ TYS +IG      ++++   L+ EM+   I P++  Y
Sbjct: 439 GKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY 498

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T LI S C+ G +++A K+F  M      P V  Y +L+  +L+      A  L E M+ 
Sbjct: 499 TILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLL 558

Query: 367 EGLKPST 373
           EG KP+ 
Sbjct: 559 EGCKPNV 565



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 170/369 (46%), Gaps = 19/369 (5%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ AF +   +  +GF     +++ +I  +  + + +  + +++ M  N   P+  T   
Sbjct: 441 FDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI + CK G +Q      D +  K C+P V+  T+LI   ++ +++     L + ML + 
Sbjct: 501 LIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEG 560

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + + Y+ ++    K   +E A  +Y  M  RG   +S +         +Y K++  N
Sbjct: 561 CKPNVVTYTALIDGHCKAGQIEKACQIYARM--RGDIESSDMD--------KYFKLDHNN 610

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           C           P   T+  L++G  KA R++E+    + M++    P+   ++ +I   
Sbjct: 611 C---------EGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGF 661

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  + A  + T   ++G+SPN  TYS  I    K+  +  VLK+  +M   S +P +
Sbjct: 662 CKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNV 721

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT ++  LC+ GK +EA K    M+     P V  Y +++    + G   + L L  +
Sbjct: 722 VIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRD 781

Query: 364 MVSEGLKPS 372
           M S+G  P+
Sbjct: 782 MCSKGCAPN 790



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 16/342 (4%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF +   +++ G   S+ ++  LI    K+       + +  ML     PN  T   L
Sbjct: 477 EKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM----- 119
           I A  K  Q+    ++ + +  + C P V+  T+LI    +  +IE+   +  RM     
Sbjct: 537 IHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIE 596

Query: 120 ---------LRKNMIH--DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
                    L  N     + I Y  +V    K   ++ A  + + ML  G   N  VY  
Sbjct: 597 SSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDA 656

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  +C+ GK+++A  +  +M   G  P   T++  I+   K  R++  L    +M+   
Sbjct: 657 VIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENS 716

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
             P+   + EM+  LC+ G   +A  ++    +KG +PN +TY+ +I G+ K G+I++ L
Sbjct: 717 CTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCL 776

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           +L+ +M  K  +P    Y  LI+  C  G L+EA K    MK
Sbjct: 777 ELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK 818



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/392 (21%), Positives = 165/392 (42%), Gaps = 22/392 (5%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           LFE A D+   +       +++++  L+    +  +     RI   M+    YPN     
Sbjct: 294 LFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFN 353

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL------L 116
           +LI A CK         +  ++    C P  +V    I  +   E      +L       
Sbjct: 354 SLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAY 413

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
             ML   ++ + +  S            + A  +  EM+ +GF  +   Y+  IG  C+ 
Sbjct: 414 SEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDA 473

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
            K+E+A  L +EM+  G+ P   T+ +LI+   KA  I+++  + ++M+ +   P+   +
Sbjct: 474 SKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTY 533

Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-- 294
             +I    +      A+ +  + L +G  PN +TY+ LI G+ K G+I++  ++Y  M  
Sbjct: 534 TALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRG 593

Query: 295 --------EYKSIS------PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
                   +Y  +       P +  Y +L+  LC+  +++EA +    M +H   P   +
Sbjct: 594 DIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIV 653

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           Y++++    + G    A  +  +M   G  P+
Sbjct: 654 YDAVIDGFCKIGKLQDAQEVFTKMSERGYSPN 685



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 171/415 (41%), Gaps = 57/415 (13%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
            +G + +++++  LIH   K+ +  +   +++ ML     PN  T   LI   CK GQ++
Sbjct: 523 HKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIE 582

Query: 76  TYVDMLDRIHG---------------KRC-SPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
               +  R+ G                 C  P VI   +L+  + +  R++E   LL  M
Sbjct: 583 KACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTM 642

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG-------- 171
           L      + I Y  ++    K+  L+ A  V+ +M +RG+S N + Y++FI         
Sbjct: 643 LAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRL 702

Query: 172 ---------------------------AYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
                                        C+ GK +EA  LM +ME  G  P   T+  +
Sbjct: 703 DLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAM 762

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I+G  K+ +IE+ L     M S+   P+   +  +I   C  G   +A  +L   + + +
Sbjct: 763 IDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLD-EMKQTY 821

Query: 265 SPNEI-TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA- 322
            P  I ++  +I G+++  E    + L  E+      P    Y  LI +  + G+LE A 
Sbjct: 822 WPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVAL 879

Query: 323 DKYFKIMKSHS-LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
           D   +I  S S  V    +Y SL+          KAL L   M+S+ + P  S L
Sbjct: 880 DLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSIL 934



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 125/283 (44%), Gaps = 10/283 (3%)

Query: 45  IYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRII 104
           ++  M E    PN  T  + I  L K  +L   + +L ++    C+P V++ T ++  + 
Sbjct: 673 VFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC 732

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
           +  + +E   L+ +M  K    + + Y+ ++    K   +E  L ++ +M  +G + N  
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFI 792

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            Y   I   C  G ++EA  L+ EM+      +  +   +IEG   ++    S+   +++
Sbjct: 793 TYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDEL 850

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP-----NEITYSHLIGGYA 279
              + +P  S +  +I    + G  + A   L L  +   SP     N+  Y+ LI   +
Sbjct: 851 SENESVPVDSLYRILIDNYIKAGRLEVA---LDLLEEISSSPSHAVSNKYLYASLIENLS 907

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
              ++ + L+LY  M  K++ P L     LI  L +  K +EA
Sbjct: 908 HASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEA 950


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 159/321 (49%), Gaps = 1/321 (0%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +   G   + +++N LIH  + S       R+++ M  ++  P+     + ++ALC
Sbjct: 281 VLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALC 340

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G+++   D+ D +  K   P VI   +L+        I     L   M+ + ++ D  
Sbjct: 341 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 400

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            ++ ++ A  ++  ++ +L+++E+M K+G + +   ++T I A+C  G++++A      M
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC-SAFNEMIRRLCECGN 248
            + G+ P    ++ LI+G    + + ++      M+S+ + P C   F  +I  LC+ G 
Sbjct: 461 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 520

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +   ++ L +  G  PN IT++ L+ GY   G ++E + L   ME   + P +  Y +
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 580

Query: 309 LISSLCQCGKLEEADKYFKIM 329
           L+   C+ G++++A   F+ M
Sbjct: 581 LVDGYCKHGRIDDALTLFRDM 601



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 151/326 (46%), Gaps = 35/326 (10%)

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           +DR      +P +     LI    +  R + G+ +  R+LR  +  D  +Y+ ++    K
Sbjct: 177 MDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSK 236

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              ++ A  ++ +M ++G   N   Y++ I   C+  ++++A  ++++M  AG++P + T
Sbjct: 237 EGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMT 296

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +N LI G + +   +ES+   ++M S  L+P     N  +  LC+ G  K+A  +    +
Sbjct: 297 YNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMV 356

Query: 261 DKGFSPNEITYSHLIGGYAKEGEI-----------------------------------Q 285
            KG  P+ I+Y  L+ GYA  G I                                    
Sbjct: 357 LKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMD 416

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           + L ++ +M  + ++P +  ++++IS+ C+ G+L++A + F  M    + P   +Y  L+
Sbjct: 417 KSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLI 476

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKP 371
                + +  KA  L  +M+S+G+ P
Sbjct: 477 QGQCNRRDLVKAKELISDMLSKGIPP 502



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 167/362 (46%), Gaps = 1/362 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G +  +I+F+T+I    +  R D     + HM++    P+ A    LI   C    
Sbjct: 425 MTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRD 484

Query: 74  LQTYVDMLDRIHGKRCSPMVI-VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           L    +++  +  K   P  I   TS+I  + +E R+ EG  ++  ++      + I ++
Sbjct: 485 LVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFN 544

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
            +V     + N++ A+ + + M   G   + + Y T +  YC++G+I++A  L ++M + 
Sbjct: 545 SLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHK 604

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
            +     ++N+++ G  +A+R   +     +M+   +  S   +  ++  LC      +A
Sbjct: 605 RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEA 664

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
           N +L          + +T++ +I    K G  QE  +L+  +    + PT+  Y  +I++
Sbjct: 665 NMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITN 724

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           L +    E+AD  F  M+  S  P   I   ++ + L KG  AKA +   ++  +G+ P 
Sbjct: 725 LIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 784

Query: 373 TS 374
            +
Sbjct: 785 AT 786



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 137/304 (45%), Gaps = 3/304 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           F ++I+ + K  R      +   ++   + PN  T  +L+   C  G ++  V +LD + 
Sbjct: 508 FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 567

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
                P +    +L+    +  RI++ + L + ML K +   +++Y++I++   + R   
Sbjct: 568 SVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 627

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
            A  ++ EM++ G + +   Y T +G  C     +EAN L++++ +  +K    TFN++I
Sbjct: 628 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVI 687

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
               K  R +E+      + +  L+P+   +  MI  L +  + + A+ + +       +
Sbjct: 688 RAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCT 747

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+    + +I     +GE+ +      +++ K I P     + LI      GK  E   Y
Sbjct: 748 PDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYRE---Y 804

Query: 326 FKIM 329
            K++
Sbjct: 805 IKLL 808



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/287 (18%), Positives = 107/287 (37%), Gaps = 70/287 (24%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +  +  +L+ +S+N ++H + ++ R  +   ++  M+E+    +  T  T++ 
Sbjct: 594 ALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLG 653

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC+                  C+                   +E  +LL+++   N+  
Sbjct: 654 GLCRNN----------------CT-------------------DEANMLLEKLFSMNVKF 678

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + +++++ A  K+                                   G+ +EA  L 
Sbjct: 679 DILTFNIVIRAMFKV-----------------------------------GRRQEAKELF 703

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             +   GL P   T+ ++I    K +  E++ +    M      P     NE+IR L   
Sbjct: 704 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 763

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
           G   +A   L+    KG  P   T S LI  ++  G+ +E +KL  E
Sbjct: 764 GEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 139/274 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+   ++E  I     +   + + ++    ++++ ++   +K+ +L+    +   M   G
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM + GL P   TF  LI+G  K  R++ ++
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ L      +N +I  LC+ G+ KQA  ++     KG  P++ITY+ LI G 
Sbjct: 262 EIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGN 321

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG+++   +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P +
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y  ++    +KG+      L +EM  +G  PS
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 20/320 (6%)

Query: 4   FEVAFDVCRYLEQR--------------------GFSLSLISFNTLIHVVTKSDRNDLVW 43
           F V FD CR + +                     G+  SL  FN L+H   K     L  
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 44  RIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRI 103
            ++  + +    P+  +  TL++   K G L     + + +      P V   + LI  +
Sbjct: 157 SVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGL 216

Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
            +E ++++   L   ML   ++ + + ++ ++    K   ++ A+ +Y++ML +  SA+ 
Sbjct: 217 CKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADL 276

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y T I   C+ G +++A  L+ EM   GLKP   T+  LI+G  K   +E +  Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   +     A+  +I  LC+ G +  A  ML   L  G  P   TY+ +I  + K+G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 284 IQEVLKLYYEMEYKSISPTL 303
           +    KL  EM+     P++
Sbjct: 397 VWTGSKLLKEMQRDGYMPSV 416



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 111/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE L+ G+ A+ + +   + ++ + G+I  A  +   +    L+P  
Sbjct: 112 MKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSV 171

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            +FN L+ G  K   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDE 231

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            LD G  PN +T++ LI G+ K G +   +++Y +M  +S+S  L  Y +LI  LC+ G 
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGD 291

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+  + ++G+   A    + M+ E ++
Sbjct: 292 LKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +RL +  FD       R    S++SFNTL++   K    D  +R+   M  +   P+  T
Sbjct: 152 IRLAQSVFDAITKWSLRP---SVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +      P  +  T+LI    +  R++  M + K+ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G +E
Sbjct: 269 SQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+ G+    + +L      G+ P+ +T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 10/256 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+ +      S 
Sbjct: 78  ESGFLRDAIECYRLTKEHKFRVPFD-TCRKVLEHLMKLKYFKLVWGFYEESLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++    + G  + A  +          P+ ++++ L+ GY K G++ E  +L   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M+   + P +  Y+ LI+ LC+  K+++A++ F  M  + LVP    + +L+  H + G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 354 KAKALHLCEEMVSEGL 369
              A+ + ++M+S+ L
Sbjct: 257 VDLAMEIYKQMLSQSL 272


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 154/313 (49%), Gaps = 2/313 (0%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           T+++ALC+ G        L R+      P  +  T+L+  +  E R  + + LL+ M   
Sbjct: 83  TVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQAS 142

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D + Y  ++       +++ A+ +  EM + G   N  VY+  +  YC+ G+ E  
Sbjct: 143 GVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECV 202

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           + + +EM   G++P    +  LI+   +  +++++    ++MM R L P+   +N +I  
Sbjct: 203 SKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINS 262

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS--IS 300
           +C+ G+ K+A  +    L+KG + + +TY+ LI G +   E+ E + L  EM +    + 
Sbjct: 263 MCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVE 322

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  + S+I  LC+ G++ +A +   +M  +     +  +  L+G  L      KA+ L
Sbjct: 323 PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMEL 382

Query: 361 CEEMVSEGLKPST 373
            +EM S GL+P +
Sbjct: 383 MDEMASSGLEPDS 395



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 173/369 (46%), Gaps = 3/369 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R ++  G    ++++ TLI  +  +   D    + + M E+   PN      L+ 
Sbjct: 132 AVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQ 191

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             CK G+ +    + + + G+   P V++ T LI  + +E ++++   ++ +M+ + +  
Sbjct: 192 GYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEP 251

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + + Y++++ +  K  +++ A+ +   ML++G + ++  Y T I       +++EA  L+
Sbjct: 252 NVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLL 311

Query: 187 QEMENAG--LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +EM +    ++P   TFN +I G  K  R+ ++    + M       +   FN +I  L 
Sbjct: 312 EEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLL 371

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                K+A  ++      G  P+  TYS LI G+ K  ++     L  +M    I P L 
Sbjct: 372 RVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELV 431

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            Y  L+++LC+ G +E+A  +F  M  +  +  V  Y +++       ++  A    + M
Sbjct: 432 HYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHM 490

Query: 365 VSEGLKPST 373
           + EGL P +
Sbjct: 491 LDEGLIPDS 499



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/413 (20%), Positives = 182/413 (44%), Gaps = 38/413 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + + G   +++ ++ L+    K+ R + V ++++ M      P+      LI 
Sbjct: 167 AVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLID 226

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           +LC+ G+++    ++D++  +   P V+    LI  + +E  ++E M L   ML K +  
Sbjct: 227 SLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVAL 286

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           D + Y+ ++     +  ++ A+ + EEM+  +     N   + + I   C+ G++ +A  
Sbjct: 287 DAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQ 346

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           +   M   G      TFNLLI G  +  ++++++   ++M S  L P    ++ +I   C
Sbjct: 347 VRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFC 406

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           +     +A  +L+     G  P  + Y  L+    ++G +++    + EM +K+    + 
Sbjct: 407 KMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVV 465

Query: 305 AYTSLISSLCQ-----------------------------------CGKLEEADKYFKIM 329
           AY+++I   C+                                    G L  A++  K M
Sbjct: 466 AYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQM 525

Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
            +   VP V +++SL+  +  KG+  K L L  EM ++ +   +  + +  TC
Sbjct: 526 TASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTC 578



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 164/382 (42%), Gaps = 45/382 (11%)

Query: 24  ISFNTLIHVVTKS----DRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
           +S+NT++  + +     D    + R+  H       P   +  TL+ ALC   +    V 
Sbjct: 79  VSYNTVLAALCRQGGCLDAALFLLRVMAHETR----PTAVSYTTLMRALCAERRTGQAVG 134

Query: 80  MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
           +L  +      P V+   +LI  +     +++ + LL+ M    +  + + YS ++    
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
           K    E    V+EEM  RG   +  +YT  I + C  GK+++A  +M +M   GL+P   
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLL----------------------------- 230
           T+N+LI    K   ++E++S    M+ + +                              
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314

Query: 231 --------PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
                   P+   FN +I  LC+ G  +QA  +  +  + G + N +T++ LIGG  +  
Sbjct: 315 IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVH 374

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           ++++ ++L  EM    + P    Y+ LI+  C+  +++ A+     M+   + P +  Y 
Sbjct: 375 KVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYI 434

Query: 343 SLVGIHLEKGNKAKALHLCEEM 364
            L+    E+G   +A +  +EM
Sbjct: 435 PLLAALCEQGMMEQARNFFDEM 456



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 98/208 (47%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
           ++  Y T + A C  G   +A   +  +     +P   ++  L+      +R  +++   
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
             M +  + P    +  +IR LC+  +  +A  +L    + G  PN + YS L+ GY K 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
           G  + V K++ EM  + I P +  YT LI SLC+ GK+++A +    M    L P V  Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGL 369
             L+    ++G+  +A+ L   M+ +G+
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGV 284



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/198 (20%), Positives = 99/198 (50%)

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + D ++Y+ ++ A  +      A +    ++       +  YTT + A C   +  +A  
Sbjct: 75  VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVG 134

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           L+++M+ +G++P   T+  LI G   A  +++++    +M    + P+   ++ +++  C
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
           + G  +  + +      +G  P+ + Y+ LI    +EG++++  ++  +M  + + P + 
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254

Query: 305 AYTSLISSLCQCGKLEEA 322
            Y  LI+S+C+ G ++EA
Sbjct: 255 TYNVLINSMCKEGSVKEA 272



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/107 (20%), Positives = 50/107 (46%)

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
           + ++Y+ ++    ++G   +       +      PT  +YT+L+ +LC   +  +A    
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + M++  + P V  Y +L+    +  +  KA+ L  EM   G++P+ 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNV 183


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 176/391 (45%), Gaps = 35/391 (8%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +++  + + ++  + K  +  L   ++  ML++  + +E      I A C+   L   
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++ R+  +      +    L+  + +  R++E + +   M+   +  D + Y  +VY 
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 138 KVKMRNLESALVVYEEMLKRGFSA-----------------------------------N 162
             +M  LE AL +  +M++ GF                                     N
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
            F Y   I   C+  + ++A+ L +EM   GL+P + T+ +LI    K   IE++L   +
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M  + +  +   +N +I   C+ G+  +A G+L+  + +G +P   +YS LI G  + G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           ++   ++L+ EM  + I+     +T+LI+  C+  K++EA + F  M   +++P    + 
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++  +   GN  KA  L ++MV  GLKP  
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 175/371 (47%), Gaps = 3/371 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR+ E A +V   +   G +   +++ TL++   + +  ++  RI   M+     P+EA 
Sbjct: 247 MRVQE-AVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I  L K   ++    +  ++      P V    +LI ++ + ER ++   L K M 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y+++++A  K   +E AL ++++M  +G     + Y + I  YC+ G ++
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+  M   GL P   +++ LI G  +   +  ++    +M  R +  +   F  +I
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALI 485

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+     +A  +    +D    PNE+T++ +I GY   G I++  +LY +M    + 
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMK-SHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           P    Y SLIS LC    + +A+++   ++ S++++    +   L G+  E G   +  H
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFRE-GRFTETYH 604

Query: 360 LCEEMVSEGLK 370
           L +EM   G+K
Sbjct: 605 LWDEMAVRGVK 615



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 178/402 (44%), Gaps = 38/402 (9%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A ++ R + +RG + +  +F  LI+   K  + D   R++  M+++   PNE T   +I 
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSP-------------------------------MVIV 95
             C  G ++    + D++      P                                 ++
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 96  N----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
           N    T+L+  + +E R  E   L   M  + +  D +++++IVYA +K  + E + V++
Sbjct: 582 NNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 152 EEMLKRGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
            EM ++G   +   YT  I A   E   I+  NC  Q M   G  P   T  +LI    K
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ-MVIDGYSPNTVTHTVLINNLCK 700

Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
           +  +  +   C++M++  +LP+   +N  +      G+ ++A  + + A+ +G   + ++
Sbjct: 701 SGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHS-AMLQGHLASIVS 759

Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
           ++ LI G  K G+IQE + L  ++     SP   +Y+++I  LC+ G + +A + +  M 
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819

Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              L P V  Y   +      G   KAL +   M+  G++P+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 45/366 (12%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FN +I            +++Y  M+E    P+  T R+LIS LC    L + V   + 
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC----LTSGVSKANE 569

Query: 84  IHGKRCSPMVIVN----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
                 +   ++N    T+L+  + +E R  E   L   M  + +  D +++++IVYA +
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYD 198
           K  + E + V++ EM ++G   +   YT  I A   E   I+  NC  Q M   G  P  
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ-MVIDGYSPNT 688

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP--------------------------- 231
            T  +LI    K+  +  +   C++M++  +LP                           
Sbjct: 689 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748

Query: 232 -------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                  S  +FN +I+ LC+ G  ++A  ++    + GFSP+ I+YS +I    K G+I
Sbjct: 749 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +  +L+ EM YK + P + AY   I      G+ ++A   +  M    + P  D Y +L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 345 V-GIHL 349
           + GI L
Sbjct: 869 LSGISL 874



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/362 (19%), Positives = 169/362 (46%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G  +++  +N+LI+   K    D    +   M++    P  A+   LI+ LC+ G 
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L + +++   +  +  +      T+LI    ++++++E   L  +M+  N+I + + +++
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     + N+  A  +Y++M++ G   +++ Y + I   C    + +AN  + ++EN+ 
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
               + +   L+ G  +  R  E+    ++M  R +     +F  ++    +  + +++ 
Sbjct: 579 AVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G  P++I Y+ +I   +KE  + + L  + +M     SP    +T LI++L
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNL 698

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G L  A+   K M + +++P    Y   +     +G+  KA  L   M+   L    
Sbjct: 699 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIV 758

Query: 374 SY 375
           S+
Sbjct: 759 SF 760


>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Brachypodium distachyon]
          Length = 746

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 164/351 (46%), Gaps = 2/351 (0%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
            +++T++  +  + R D    +   M+ +     EA    ++ A+ + G +     +   
Sbjct: 315 FTYSTVVSALADAGRVDDAVALVHEMVVDGVVAAEA-FNPVLGAMLRTGDVTGAAKLFSF 373

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  K C+P       L+  ++   R +  M +++RM R  ++   + Y  +V   V+   
Sbjct: 374 MQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGR 433

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           LE A  V EEM  +G   N FV++  I  +C+ G+++ A+ +   M  AG+KP    ++ 
Sbjct: 434 LEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSA 493

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           +I+G A+  ++ E+     +M+  K +P+   ++ M+R   + G++ QA       L  G
Sbjct: 494 MIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIG 553

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +PN +TYS LI G    G  ++ + ++  M  +   P   AYTS+I   C  G ++   
Sbjct: 554 CTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGL 613

Query: 324 K-YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           + ++ ++      P V  Y  L+   L   +  +A+ L  +M+ +   P T
Sbjct: 614 RLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDT 664



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 1/250 (0%)

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++ D   YS +V A      ++ A+ +  EM+  G  A    +   +GA    G +  A 
Sbjct: 310 LVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVVAAE-AFNPVLGAMLRTGDVTGAA 368

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L   M+  G  P   T+N+L+ G     R + ++    +M   +++P    +  ++  L
Sbjct: 369 KLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGL 428

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
             CG  + A  ++     KG  PNE  +S +I G+ K GE+    +++  M    I P +
Sbjct: 429 VRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNV 488

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+++I  L +CGK+ EA+  F+ M     VP +  Y S+V  + + G+ ++AL   E+
Sbjct: 489 VLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWED 548

Query: 364 MVSEGLKPST 373
           M+  G  P+ 
Sbjct: 549 MLRIGCTPNA 558



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/342 (18%), Positives = 148/342 (43%), Gaps = 19/342 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           + A  V R +E+      ++++  ++  + +  R +   ++ + M      PNE     +
Sbjct: 400 KAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPV 459

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+  CK G++     + D +      P V++ +++I  + +  ++ E  +L + M+    
Sbjct: 460 ITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKC 519

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
           + + + YS +V    ++ +   AL  +E+ML+ G + N+  Y+  I   C  G+ ++A  
Sbjct: 520 VPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMM 579

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRL 243
           + + M   G  P    +  +I+G   +  ++  L     M++R    P    +N ++  L
Sbjct: 580 VWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGL 639

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
               +  +A  +L   LD+   P+ +T +  +    +E E+ +  + + E          
Sbjct: 640 LRAKDLPRAMDLLNQMLDQACDPDTVTCNTFL----REIEVGQKGQEFLE---------- 685

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
                L+  LC   + + A +   +M +  +VP   + E +V
Sbjct: 686 ----GLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAAVLEMVV 723


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 157/370 (42%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 97  FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEEILE-CGYPASLYFFN 140

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + + I      P V+                            
Sbjct: 141 ILMHKFCKDGDIRVAQSVFNAITKWGLRPSVV---------------------------- 172

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +++ ++   +++ +L+    +   M   G   + + Y+  I   C+  K+++A
Sbjct: 173 -------SFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM + GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 226 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC  G+ KQA  ++     KG  P++ITY+ LI G  KEG+++   +    M  ++I   
Sbjct: 286 LCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLD 345

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YT+LIS LCQ G+  +A+K  + M S  L P    Y  ++    +KG+      L +
Sbjct: 346 DVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLK 405

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 406 EMQRDGQMPS 415



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 121/265 (45%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           VA  V   + + G   S++SFNTL++   +    D  +R+   M  +   P+  T   LI
Sbjct: 154 VAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLI 213

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK  ++    ++ D +  K   P  +  T+LI    +  R++  M + K+ML +++ 
Sbjct: 214 NGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            D I Y+ ++Y   +  +L+ A  + +EM  +G   +   YTT I   C+ G +E A   
Sbjct: 274 PDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEH 333

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
            + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I   C+
Sbjct: 334 RKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCK 393

Query: 246 CGNAKQANGMLTLALDKGFSPNEIT 270
            G+    + +L      G  P+ +T
Sbjct: 394 KGDVWTGSKLLKEMQRDGQMPSVVT 418



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 45/259 (17%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 18  TMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 78  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ + C+ G+ + A  +       G  P+ ++++ L+ GY + G++ E  +L   
Sbjct: 137 YFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F                           
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELF--------------------------- 229

Query: 354 KAKALHLCEEMVSEGLKPS 372
                   +EM+ +GL P+
Sbjct: 230 --------DEMLDKGLVPN 240


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 176/372 (47%), Gaps = 16/372 (4%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +L  + +N L++V+   ++  LV  ++  M+     P+ +T   LI ALCK  Q++  
Sbjct: 153 GLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPA 212

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           + +++ +      P     T+L+   I+E  ++    + ++ML        +  +++V+ 
Sbjct: 213 ILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHG 272

Query: 138 KVKMRNLESALV----------------VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             K   +E AL                 +Y EM  +G   + F Y   I + C  GK++E
Sbjct: 273 FCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQE 332

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L++EME +G      T+N LI+G  K K+IEE+    +QM  + L  +   +N +I 
Sbjct: 333 ALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLID 392

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
            LC+    ++A  ++   + +G  P++ TY+ ++  + +EG+IQ+   +   M      P
Sbjct: 393 GLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEP 452

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
            +  Y +LI  LC+ G++E A +  + ++   +V     Y  ++    ++    +A+ L 
Sbjct: 453 DIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLF 512

Query: 362 EEMVSEGLKPST 373
            EM  +G  P  
Sbjct: 513 REMEEKGNTPDA 524



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 29/353 (8%)

Query: 41  LVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI 100
           L W   Q    N R PN +    ++  L K G   +  D+L  + G  C     ++  ++
Sbjct: 74  LSWASKQ---PNFR-PNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQ----IDRGVL 125

Query: 101 LRIIQE----ERIEEGMVLLKRM-LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
           L  I      E  EE + +++ M +   +  DT+ Y+ ++   V    L+    V+  M+
Sbjct: 126 LIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMV 185

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
            +G   +   +   I A C+  +I  A  +M+EM + GL P ++TF  L++G  +   ++
Sbjct: 186 SKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMD 245

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA---------NGMLTLAL------ 260
            +    EQM+      +    N ++   C+ G  ++A          G  T+A+      
Sbjct: 246 GAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEM 305

Query: 261 -DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
            +KG  P+E TY+ LI      G++QE L L  EME    +  +  Y +LI   C+  K+
Sbjct: 306 KNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKI 365

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EEA++ F  M+   L      Y +L+    +     +A  L ++M+ EGLKP 
Sbjct: 366 EEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPD 418



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 1/204 (0%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++   +E +G S + +++NTLI  + KS R     ++   M+     P++ T  ++
Sbjct: 366 EEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSM 425

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           ++  C+ G +Q   D++  +    C P ++   +LI  + +  R+E    LL+ +  K M
Sbjct: 426 LTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGM 485

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY-TTFIGAYCEYGKIEEAN 183
           +    AY+ ++ A  K +  + A+ ++ EM ++G + ++F Y   F G     G I EA 
Sbjct: 486 VLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAV 545

Query: 184 CLMQEMENAGLKPYDETFNLLIEG 207
             + EM   G  P   +F +L EG
Sbjct: 546 DFVIEMIEKGFLPEFSSFYMLAEG 569



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 5/284 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R +E  G + ++I++NTLI    K+ + +    I+  M       N  T  TLI 
Sbjct: 333 ALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLID 392

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK  ++Q    ++D++  +   P      S++    +E  I++   +++ M       
Sbjct: 393 GLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEP 452

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D + Y  ++    K   +E A  +   +  +G       Y   I A  +  + +EA  L 
Sbjct: 453 DIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLF 512

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAK-RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +EME  G  P   T+ ++  G + +   I E++ +  +M+ +  LP  S+F  +   LC 
Sbjct: 513 REMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCS 572

Query: 246 CGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVL 288
                    ++ L ++K  FS NE+    +I G+ K  + Q+ L
Sbjct: 573 LSMEDTLIKLVDLVMEKANFSQNEVV---MIRGFLKIRKFQDAL 613


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 183/446 (41%), Gaps = 80/446 (17%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR----IYQHMLENIRYPNEAT 60
           E A+++CR +   G   S   FN +I    K   ND +W+    +++ M ++   P+  T
Sbjct: 334 EKAYELCRQMRDHGLLPSTNEFNMVI----KGLLNDKLWKDAVSLFKEMADS-GIPDAFT 388

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  LC+  +++  +++ ++++     P ++   SL+L       ++E + L   M 
Sbjct: 389 YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMP 448

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K    + + Y+ ++   +     + A  +  EM + G S N + Y T I   C  G++ 
Sbjct: 449 GKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVC 508

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP--------- 231
           E   +++  E  G  P   T+N +I G  KA  +  + +  +QM ++ + P         
Sbjct: 509 EVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568

Query: 232 ------SC--------------------SAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
                 SC                    +A+N +I   C+ GN   A  +L L L  G  
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLL 628

Query: 266 PN-----------------------------------EITYSHLIGGYAKEGEIQEVLKL 290
           PN                                     TY+ LI G++K+G +   LKL
Sbjct: 629 PNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKL 688

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           Y EM  K   P    +T+L   LC+ G +++A K    M    + P V +Y  L+  +L 
Sbjct: 689 YSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLR 748

Query: 351 KGNKAKALHLCEEMVSEGLKP-STSY 375
            G   +A  L +EM+   + P  T+Y
Sbjct: 749 NGKLQEAFRLHDEMLERKIMPDDTTY 774



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 172/408 (42%), Gaps = 46/408 (11%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  V R ++  GF     +FN+++ V+ K  R +    I   +L   +  +     TL+ 
Sbjct: 231 ALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMH 290

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C   +++  +D+ +        P  +  T LI    +E   E+   L ++M    ++ 
Sbjct: 291 GYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            T  +++++   +  +  + A+ +++EM   G   ++F Y   I   C+  KI EA  L 
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLW 409

Query: 187 QEMENAGLKPYDETFNLL-----IEGCAKAKRIEESLSYCEQMMSRKLLP---------- 231
           ++M   G+KPY  T++ L     + GC     ++E++    +M  +   P          
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGC-----MDEAVKLYTEMPGKGFTPNVVTYTTLMK 464

Query: 232 -----------------------SCS--AFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
                                  SC+   +N +I  LC  G   +   ML     +GF P
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVP 524

Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
             +TY+ +I G+ K G +     +Y +M  K I P +  YTS I   C+    + A K  
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKML 584

Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
             ++   L P +  Y SL+    ++GN + AL +   M+ +GL P+ S
Sbjct: 585 NDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNIS 632



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 173/411 (42%), Gaps = 43/411 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G  L    F+ ++    K    D   R++  M  +   P++      I++LCK   
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
               + +L ++      P      S++  +++  R+EE + +   +L        +  + 
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++     R +  AL ++EE L+ G       YT  I    E G  E+A  L ++M + G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA- 252
           L P    FN++I+G    K  ++++S  ++M     +P    +N +I  LC+    ++A 
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREAL 406

Query: 253 ---------------------------NGMLTLALD-------KGFSPNEITYSHLIGGY 278
                                      NG +  A+        KGF+PN +TY+ L+ G+
Sbjct: 407 NLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
             +    +   L  EM+   +S     Y +LI+ LC  G++ E  +  K  ++   VP  
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS----TSYL---CSASTC 382
             Y S++   ++ G    A  + ++M ++G+ P+    TS++   C  S C
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCC 577



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 36/310 (11%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R+ EV  ++ +  E  GF  + +++N++I+   K+      + +YQ M      PN  T 
Sbjct: 506 RVCEVG-EMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTY 564

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            + I   CK       + ML+ +  K   P +    SLI    QE  +   + +L  ML+
Sbjct: 565 TSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLK 624

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
             ++ +   Y+  +     ++ +E AL +YE+M+K G   ++  YTT I  + + G +  
Sbjct: 625 DGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTF 684

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L  EM   G  P   TF  L  G  +   I++         +RKLL      +EM R
Sbjct: 685 ALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDD---------ARKLL------DEMNR 729

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                             LD    PN + Y+ LI GY + G++QE  +L+ EM  + I P
Sbjct: 730 ------------------LD--IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMP 769

Query: 302 TLPAYTSLIS 311
               Y  L+ 
Sbjct: 770 DDTTYDILVG 779



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 2/222 (0%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE-TFNLLIEGCAKAK 212
           M  RG + ++   T  +          +A  L+ EM   G +P D   F++++  C K  
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKG-RPLDAWMFDVVMRACFKEG 191

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
             ++++   ++M + ++ P     +  I  LC+  +A +A  +L    D GF P + T++
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            ++    K G ++E L +  E+       ++   T+L+   C   ++ +A   F+     
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            LVP    Y  L+    E+G   KA  LC +M   GL PST+
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 60/138 (43%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +++ E A  +   + + G  L   ++ TLI   +K        ++Y  M+     P+  T
Sbjct: 644 LKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              L   LC+ G +     +LD ++     P V++   LI   ++  +++E   L   ML
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763

Query: 121 RKNMIHDTIAYSLIVYAK 138
            + ++ D   Y ++V  K
Sbjct: 764 ERKIMPDDTTYDILVGMK 781


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 1/320 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ-T 76
           G   +LI+F +LI+ + K       + + + M++    PN  T   LI  LCK G  +  
Sbjct: 296 GLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKA 355

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
           +   L  +      P V   TS+I    +E+++    +LL RM  + ++ +T  Y+ ++ 
Sbjct: 356 FRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLID 415

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K  N E A  + + M K GFSAN F Y  FI + C+ G+  EA  L+++    GL+ 
Sbjct: 416 GHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQA 475

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +LI    +     E+L +  +M    + P    +N +I         +++  + 
Sbjct: 476 DTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLF 535

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
             A+  G  P + TY+ +I GY ++  +   LK +  M     +P    Y +LIS LC+ 
Sbjct: 536 AEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKE 595

Query: 317 GKLEEADKYFKIMKSHSLVP 336
            KL+EA + ++ M    L P
Sbjct: 596 SKLDEACQLYEAMVDKGLSP 615



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 152/368 (41%), Gaps = 37/368 (10%)

Query: 9   DVCRYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           D  R+L+   +RGF +   +   +I    +      V+  +   +E    PN     +LI
Sbjct: 249 DTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLI 308

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK G ++   +ML+ +  K   P V  +T+LI  + ++   E+   L  +++R +  
Sbjct: 309 NGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD-- 366

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
                                            +  N   YT+ I  YC+  K+  A  L
Sbjct: 367 --------------------------------DYKPNVHTYTSMIHGYCKEDKLNRAEML 394

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +  M+  GL P  +T+  LI+G +KA   E++    + M       +   +N  I  LC+
Sbjct: 395 LSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCK 454

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G   +A  +L      G   + +TY+ LI    +  + +E L  + +M    + P +  
Sbjct: 455 KGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHT 514

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y +LI++  +  ++EE++K F       LVP  + Y S++  +    N + AL     M 
Sbjct: 515 YNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMS 574

Query: 366 SEGLKPST 373
             G  P +
Sbjct: 575 DHGCTPDS 582



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 3/302 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++ ++IH   K D+ +    +   M E    PN  T   LI    K G  +   +++D +
Sbjct: 374 TYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLM 433

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +  S  +    + I  + ++ R  E   LLK+  R  +  DT+ Y++++    +  + 
Sbjct: 434 GKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADT 493

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             ALV + +M K G   +   Y T I A+    ++EE+  L  E    GL P  ET+  +
Sbjct: 494 REALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSM 553

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           I G  + + +  +L +  +M      P    +  +I  LC+     +A  +    +DKG 
Sbjct: 554 ICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGL 613

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
           SP E+T   L   Y K+ +    + +   ++ K    T+    +LI  LC   K+  A  
Sbjct: 614 SPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTV---NTLIRKLCSERKVGMAVL 670

Query: 325 YF 326
           +F
Sbjct: 671 FF 672



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 4/254 (1%)

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           H+ +   + V+A++     + A+ +  EM   G            G   E G +  A  +
Sbjct: 161 HEVMDCMVRVFAEIG--KFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENV 218

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             EM   G+ P   ++ L+     +  RI ++  + + M+ R  +   +    MI   CE
Sbjct: 219 FDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCE 278

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G A +        ++ G  PN I ++ LI G  K G I++  ++  EM  K   P +  
Sbjct: 279 KGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYT 338

Query: 306 YTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
           +T+LI  LC+ G  E+A + F K+++S    P V  Y S++  + ++    +A  L   M
Sbjct: 339 HTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRM 398

Query: 365 VSEGLKPST-SYLC 377
             +GL P+T +Y C
Sbjct: 399 KEQGLVPNTKTYTC 412


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 165/326 (50%), Gaps = 7/326 (2%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRI---HGKRCSPMVIVNTSLILRIIQEERIEEG 112
           P+  +  TL+   C   + +  +++L  +    G+ C P V+   ++I     E ++++ 
Sbjct: 163 PDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKA 222

Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
             L   M+ + +  + + Y+ ++    K + ++ A  V+++M+ +G   ++  Y   I  
Sbjct: 223 YNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHG 282

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           Y   GK +E   +++EM   GLKP   T+  L+       R  E+  + + M+ + + P+
Sbjct: 283 YLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPN 342

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
            + +  +I      G   + + +L L ++ G SP+   ++ +   YAK+  I E + ++ 
Sbjct: 343 VAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFN 402

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV-GI-HLE 350
           +M+ + +SP +  + +LI +LC+ G++++A   F  M +  + P + ++ SLV G+  ++
Sbjct: 403 KMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVD 462

Query: 351 KGNKAKALHLCEEMVSEGLKPSTSYL 376
           K  KAK  +   EM+++G++P   + 
Sbjct: 463 KWEKAKEFYF--EMLNQGIRPDVVFF 486



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 162/366 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+++   +  RG   +++++ T+I  + K+   D    ++Q M++    P+  T   LI 
Sbjct: 222 AYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIH 281

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
                G+ +  V ML+ +      P      SL+  +    R  E       M+RK +  
Sbjct: 282 GYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKP 341

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +   Y ++++       L     +   M++ G S +  ++     AY +   I+EA  + 
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M+  GL P    F  LI+   K  R+++++    QMM+  + P+   FN ++  LC  
Sbjct: 402 NKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTV 461

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
              ++A       L++G  P+ + ++ ++     +G++ +  +L   ME     P + +Y
Sbjct: 462 DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISY 521

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           T+LI   C  G+++EA K   +M S  L P    Y +L+  +   G    A  +  EM+ 
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581

Query: 367 EGLKPS 372
            G+ P 
Sbjct: 582 NGITPG 587



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 154/351 (43%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++S+ T+I+      + D  + ++  M++    PN  T  T+I  LCK   +     + 
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
            ++  K   P       LI   +   + +E + +L+ M    +  D   Y  ++      
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
                A   ++ M+++G   N  +Y   I  Y   G + E + L+  M   GL P    F
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N++    AK   I+E++    +M  + L P    F  +I  LC+ G    A       ++
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G +PN   ++ L+ G     + ++  + Y+EM  + I P +  + +++ +LC  G++ +
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A +   +M+     P V  Y +L+G H   G   +A    + M+S GLKP 
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 160/366 (43%), Gaps = 8/366 (2%)

Query: 16  QRGFSLSLISFNTLIH-VVTK---SDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           ++G   ++  +  LIH   TK   S+ +DL+      M+EN   P+      + +A  K 
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLL----NLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
             +   + + +++  +  SP V+   +LI  + +  R+++ ++   +M+ + +  +   +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + +VY    +   E A   Y EML +G   +   + T +   C  G++ +A  L+  ME 
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            G +P   ++  LI G     RI+E+    + M+S  L P    +N ++   C  G    
Sbjct: 512 VGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A G+    L  G +P  +TYS ++ G        E  +LY  M        +  Y  +++
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
            L +   ++EA K F+ + S      +  +  ++G   + G    A+HL   + S GL P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691

Query: 372 STSYLC 377
                C
Sbjct: 692 DVFTYC 697



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 159/368 (43%)

Query: 9   DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           D+   + + G S     FN +     K    D    I+  M +    P+      LI AL
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDAL 423

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           CK G++   V   +++  +  +P + V  SL+  +   ++ E+       ML + +  D 
Sbjct: 424 CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV 483

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + ++ I+        +  A  + + M + G   +   YTT IG +C  G+I+EA   +  
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDV 543

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M + GLKP + T+N L+ G  +A RI+++     +M+   + P    ++ ++  L     
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
             +A  +    +  G   N   Y+ ++ G +K   + E  KL+  +  K     +  +  
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I +L + G+ E+A   F  + S+ LVP V  Y  +    +E+G   +   L   M   G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723

Query: 369 LKPSTSYL 376
             P++  L
Sbjct: 724 TTPNSRML 731



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/375 (20%), Positives = 161/375 (42%), Gaps = 5/375 (1%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR----YPN 57
           RL E    + + + + G +  ++S+NTL+       R +    +  HM+ + +     PN
Sbjct: 144 RLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL-HMMADSQGRSCPPN 202

Query: 58  EATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
             +  T+I+     GQ+    ++   +  +   P V+  T++I  + + + ++    + +
Sbjct: 203 VVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQ 262

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           +M+ K +  D   Y+ +++  + +   +  + + EEM   G   + + Y + +   C  G
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +  EA      M   G+KP    + +LI G A    + E       M+   L P    FN
Sbjct: 323 RCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN 382

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            +     +     +A  +      +G SP+ + +  LI    K G + + +  + +M  +
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE 442

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            ++P +  + SL+  LC   K E+A +++  M +  + P V  + +++     KG   KA
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502

Query: 358 LHLCEEMVSEGLKPS 372
             L + M   G +P 
Sbjct: 503 QRLIDLMERVGTRPD 517



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 11/230 (4%)

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS-YCEQ 223
            Y+  IG +C  G++E        +  +G +  +   N L++G   AKR+ E++    ++
Sbjct: 96  TYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKR 155

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGFSPNEITYSHLIGGYAK 280
           M      P   ++N +++  C    A++A  +L +  D   +   PN ++Y+ +I G+  
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFT 215

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
           EG++ +   L+ EM  + I P +  YT++I  LC+   ++ A+  F+ M    + P  D 
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275

Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-------TSYLCSASTCR 383
           Y  L+  +L  G   + + + EEM + GLKP         +YLC+   CR
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 135/312 (43%), Gaps = 6/312 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQL--- 74
           G + ++  FN+L++ +   D+ +     Y  ML     P+     T++  LC  GQ+   
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKA 502

Query: 75  QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
           Q  +D+++R+ G R  P VI  T+LI       RI+E    L  ML   +  D   Y+ +
Sbjct: 503 QRLIDLMERV-GTR--PDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           ++   +   ++ A  V+ EML+ G +     Y+T +       +  EA  L   M  +G 
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           +     +N+++ G +K   ++E+    + + S+      + FN MI  L + G  + A  
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +       G  P+  TY  +     +EG ++E   L+  ME    +P      +L+  L 
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLL 739

Query: 315 QCGKLEEADKYF 326
             G +  A  Y 
Sbjct: 740 HRGDITRAGAYL 751



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 108/262 (41%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +E+ G    +IS+ TLI       R D   +    ML     P+E T  TL+   C+ G+
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     +   +     +P V+  ++++  +    R  E   L   M+      +   Y++
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+    K   ++ A  +++ +  + F      +   IGA  + G+ E+A  L   + + G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L P   T+ L+ E   +   +EE       M      P+    N ++RRL   G+  +A 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 254 GMLTLALDKGFSPNEITYSHLI 275
             L+   +K FS    T + LI
Sbjct: 749 AYLSKLDEKNFSLEASTTAMLI 770


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 156/371 (42%), Gaps = 52/371 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 84  FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEEILE-CGYPASLYFFN 127

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 128 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV---------------------------- 159

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   ++  +L+    +   ML  G   + + Y+  I   C+  K+++A
Sbjct: 160 -------SYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDA 212

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 213 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 272

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA+ ++     KG  P++ITY+ LI G  KEG++    +    M  ++I   
Sbjct: 273 LCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLD 332

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
             AYT+LIS  CQ G+  +A+K  + M S  L P    Y  ++    + G+      L +
Sbjct: 333 EVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLK 392

Query: 363 EMVSEGLKPST 373
           EM  +G  PS 
Sbjct: 393 EMQRDGHVPSV 403



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 129/277 (46%), Gaps = 3/277 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ +  FD    + + G   S++S+NTL++   +    D  + +   ML +   P+  T
Sbjct: 139 IRVAQSVFDA---ITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYT 195

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 196 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G ++
Sbjct: 256 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLD 315

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  +  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 316 SAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 375

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              C+ G+    + +L      G  P+ +TY+ L+ G
Sbjct: 376 NEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + +++ AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 5   TMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIAAYL 64

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 65  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 123

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E   L   
Sbjct: 124 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSX 183

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 244 VDLAMEIYKQMLSQSLSPD 262


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 169/378 (44%), Gaps = 50/378 (13%)

Query: 43  WRIYQHMLENIRYPNEATIRTLISALCKG-GQLQTYVDMLDRIHGKR---CSPMVIVNTS 98
           ++  + ++  ++  N      ++ ++C+G G++    D L   H  +   C P      +
Sbjct: 67  FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN---LESALVVYEEML 155
           ++  +++E ++       K M R+  +  T+A SL V  K   RN   +++ L ++ EM 
Sbjct: 127 VLAILVEENQLNLAFKFYKNM-REIGLPPTVA-SLNVLIKALCRNDGTVDAGLKIFLEMP 184

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           KRG   +S+ Y T I   C +G+I+EA  L  EM      P   T+  LI G   +K ++
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           E++ Y E+M S+ + P+   ++ ++  LC+ G + QA  +  + + +G  PN +TY+ LI
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  KE +IQE ++L   M  + + P    Y  +IS  C   K  EA  +   M    + 
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364

Query: 336 PG-----------------------------------------VDIYESLVGIHLEKGNK 354
           P                                          V+  ESLV    +KG  
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEF 424

Query: 355 AKALHLCEEMVSEGLKPS 372
            KA+ L +E+V++G  PS
Sbjct: 425 QKAVQLVDEIVTDGCIPS 442



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 156/335 (46%), Gaps = 9/335 (2%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG-GQLQTYVDMLDR 83
           ++ T++ ++ + ++ +L ++ Y++M E    P  A++  LI ALC+  G +   + +   
Sbjct: 123 AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLE 182

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  + C P      +LI  + +  RI+E   L   M+ K+     + Y+ ++      +N
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           ++ A+   EEM  +G   N F Y++ +   C+ G+  +A  L + M   G +P   T+  
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  K ++I+E++   ++M  + L P    + ++I   C     ++A   L   +  G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362

Query: 264 FSPNEITYS-------HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
            +PN +T++        ++ G            LY  M  + IS  +    SL+  LC+ 
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKK 421

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
           G+ ++A +    + +   +P    ++ L+G  L+K
Sbjct: 422 GEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDK 456



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 119/269 (44%), Gaps = 6/269 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG      ++ TLI  + +  R D   +++  M+E    P   T  +LI+ LC    
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   +  L+ +  K   P V   +SL+  + ++ R  + M L + M+ +    + + Y+ 
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K + ++ A+ + + M  +G   ++ +Y   I  +C   K  EA   + EM   G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362

Query: 194 LKPYDETFNLLIEGCAKAKR------IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
           + P   T+N+ ++   +  R         + +    M SR +         +++ LC+ G
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKG 422

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIG 276
             ++A  ++   +  G  P++ T+  LIG
Sbjct: 423 EFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 153/308 (49%)

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A CK    +  + +LD +  K C+P ++    ++  I QE R+++ +  LK +       
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           +T++Y++++         E A  +  EM ++G   N   +   I   C  G +E A  ++
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           +++   G  P   ++N L+    K K++++++++ + M+SR   P   ++N ++  LC  
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G    A  +L    DKG +P  I+Y+ +I G  K G+ +E L+L  EM  K + P +  Y
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
           +++ + LC+  ++E+A + F  ++   + P   +Y +++    ++     A+ L   M+ 
Sbjct: 241 STIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG 300

Query: 367 EGLKPSTS 374
            G  P+ S
Sbjct: 301 NGCMPNES 308



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 148/314 (47%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+  T   +++ +C+ G++   ++ L  +    C P  +    ++  +   ER E+   L
Sbjct: 25  PDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 84

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  M +K    + + +++++    +   +E AL V E++ K G + NS  Y   + A+C+
Sbjct: 85  MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 144

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K+++A   +  M + G  P   ++N L+    ++  ++ ++    Q+  +   P   +
Sbjct: 145 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 204

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I  L + G  K+A  +L   + KG  P+ ITYS +  G  +E  I++ ++ + +++
Sbjct: 205 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 264

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
              I P    Y ++I  LC+  +   A   F  M  +  +P    Y  L+     +G   
Sbjct: 265 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 324

Query: 356 KALHLCEEMVSEGL 369
           +A  L +E+ S G+
Sbjct: 325 EARDLLDELCSRGV 338



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 112/228 (49%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L E A +V   + + G + + +S+N L+H   K  + D        M+    YP+  +  
Sbjct: 112 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 171

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALC+ G++   V++L ++  K C+P++I   ++I  + +  + +E + LL  M+ K
Sbjct: 172 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 231

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS I     +   +E A+  + ++   G   N+ +Y   I   C+  +   A
Sbjct: 232 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 291

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             L   M   G  P + T+ +LIEG A    I+E+    +++ SR ++
Sbjct: 292 IDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339


>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
 gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
          Length = 448

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 162/333 (48%), Gaps = 2/333 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE  G ++ ++++N ++  +  S   D  ++     + +   P+    +T++  L K G+
Sbjct: 71  LESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGK 130

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            +   +++  +  K+  P  +  T+LI  + +  R ++ M +   M+ K ++ +   Y+ 
Sbjct: 131 TREASEVVGEMI-KKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTS 189

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++ A  + R L+ A  ++ EM++RG+  ++  Y   +   C  G+   A  +   M + G
Sbjct: 190 LLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRG 249

Query: 194 LKPYDETFNLLIEGCAKAKRIEES-LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
             P + T+  LI GC  A RI E+ + + E +   K L     +N +I  LC     ++A
Sbjct: 250 HVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEA 309

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +    +DKG  P   TY+ LI G+ K  E+ + L+L+  ME K  SP    Y++ I  
Sbjct: 310 LEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDG 369

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           LC+ GK+ EA ++F+       VP    Y +L+
Sbjct: 370 LCKVGKINEAHEFFQQSVERGCVPDNVTYNALI 402



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 1/221 (0%)

Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKR 213
           ML+ G   +   Y   +    +   +++A  ++  M   G  P   T  LL++   + KR
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
           + E     +++ S  +     A+N +++ L   G+         +A+  G  P+ + Y  
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS 333
           ++    K G+ +E  ++  EM  KS+ P    YT+LIS LC+  + ++A K F IM    
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179

Query: 334 LVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           +VP +D+Y SL+  H        A  L  EM+  G  PS S
Sbjct: 180 IVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSAS 220



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/350 (20%), Positives = 144/350 (41%), Gaps = 2/350 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N L+  +TK    D    +   M+     P+  T   L+   C+  ++    ++   +
Sbjct: 12  SYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQEL 71

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
                +  ++   +++  ++     + G       +    +   +AY  ++   +K    
Sbjct: 72  ESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKT 131

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
             A  V  EM+K+    +   YT  I   C++ + ++A  +   M    + P  + +  L
Sbjct: 132 REASEVVGEMIKKSVP-DGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSL 190

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           +    + ++++ +     +M+ R   PS S +  ++R LC  G +  A  + +    +G 
Sbjct: 191 LAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGH 250

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYE-MEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            P+E TY+ LI G    G I E   L+ E +E +        Y  LI  LC+  K+EEA 
Sbjct: 251 VPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEAL 310

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           +    M     +P +  Y +L+    +     KAL L   M  +G  P+T
Sbjct: 311 EVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNT 360



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 1/254 (0%)

Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
           ML   ++ D  +Y+L+V    K+ +++ A  +   M+  G+  +       +  +CE  +
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           + E   L QE+E+ G+      +N +++    +   +    + +  +    LP   A+  
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           M+  L + G  ++A+ ++   + K   P+ +TY+ LI    K     + +K++  M  K 
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           I P L  YTSL+++ C+  KL+ A + F  M      P    Y  L+      G    A 
Sbjct: 180 IVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAY 239

Query: 359 HLCEEMVSEGLKPS 372
            +   M S G  P 
Sbjct: 240 DIHSSMRSRGHVPD 253



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 1/223 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +L  + +L+    ++ + D  +R++  M++    P+ +T   L+  LC GG+     D+ 
Sbjct: 183 NLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIH 242

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIHDTIAYSLIVYAKVK 140
             +  +   P      SLI       RI E  VL K +L  +  + D   Y++++    +
Sbjct: 243 SSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCR 302

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
              +E AL V   M+ +G       Y   I  + +  ++++A  L + ME  G  P    
Sbjct: 303 ASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMI 362

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           ++  I+G  K  +I E+  + +Q + R  +P    +N +IR L
Sbjct: 363 YSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGL 405



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 76/152 (50%)

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M+   ++P   ++N ++R L +  +  QA  ML+  + +G+ P+ +T   L+  + +   
Sbjct: 1   MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           + EV +L+ E+E   ++  + AY +++ +L   G  +   K+  I      +P V  Y++
Sbjct: 61  VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
           ++   ++ G   +A  +  EM+ + +    +Y
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSVPDGMTY 152



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A +V   +  +G   +L ++N LI    K++  D   ++++ M E    PN     T 
Sbjct: 307 EEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTF 366

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LCK G++    +   +   + C P  +   +LI  +    R++E   L + M  +  
Sbjct: 367 IDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGY 426

Query: 125 IHD 127
           I D
Sbjct: 427 IAD 429



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/142 (17%), Positives = 62/142 (43%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           +N LI  + ++ + +    +   M++    P   T   LI    K  ++   + +   + 
Sbjct: 293 YNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVME 352

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            K  SP  ++ ++ I  + +  +I E     ++ + +  + D + Y+ ++        ++
Sbjct: 353 EKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMD 412

Query: 146 SALVVYEEMLKRGFSANSFVYT 167
            A  +Y EM +RG+ A+  + T
Sbjct: 413 EAHRLYREMGERGYIADRSLRT 434


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 156/319 (48%), Gaps = 2/319 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R+++ R +S  + SFN +I  V +  +      + + M E    P+  T   L+  LC+ 
Sbjct: 71  RWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRT 130

Query: 72  GQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            ++    ++L R+     C P V+  TS+I    +  ++E+ M +   M+   ++ +T+ 
Sbjct: 131 NEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVT 190

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y++++    K+ +L SA+ VY++M +     +   +++ I  YC  G++++A  +  +M 
Sbjct: 191 YNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMA 250

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGNA 249
              ++P   TF+++I    K  R +E++    ++  R  + P    +N +I  LC+CG  
Sbjct: 251 QHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKV 310

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +AN +     +KG  P++ TY+ LI GY  +  I E +  ++EM     SP        
Sbjct: 311 DEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCF 370

Query: 310 ISSLCQCGKLEEADKYFKI 328
           IS L + G   E D   ++
Sbjct: 371 ISCLLKAGMPNEVDHVMRL 389



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 155/339 (45%), Gaps = 3/339 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++N L+  +    R   V  +++  +++  Y P+  +   +I  +C+ GQ+Q  +++++R
Sbjct: 48  AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 107

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM-IHDTIAYSLIVYAKVKMR 142
           ++   CSP  + +  L+  + +   +  G  +L+R+ R  + + + + ++ ++    K  
Sbjct: 108 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 167

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            LE A+ VY +M+  G   N+  Y   I  Y + G +  A  + Q+M      P   TF+
Sbjct: 168 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 227

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT-LALD 261
            LI+G  +  +++++L     M   ++ P+   F+ +I  LC+   + +A G+L  L L 
Sbjct: 228 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 287

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
              +P    Y+ +I    K G++ E   +   ME K   P    YT LI   C   ++ E
Sbjct: 288 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 347

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           A  +F  M      P        +   L+ G   +  H+
Sbjct: 348 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHV 386



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 118/247 (47%), Gaps = 5/247 (2%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           AY+ ++ + +    +   + ++E  ++ R +S + + +   I   C  G++++A  L++ 
Sbjct: 48  AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 107

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL-LPSCSAFNEMIRRLCECG 247
           M   G  P   T N+L++G  +   +        ++    + +P+   F  +I   C+ G
Sbjct: 108 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 167

Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
             + A  +    +  G  PN +TY+ LI GY K G++   +++Y +M      P +  ++
Sbjct: 168 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 227

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           SLI   C+CG+L++A + +  M  H + P V  +  ++    ++    +A+ L  E+   
Sbjct: 228 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNEL--- 284

Query: 368 GLKPSTS 374
            L+P  +
Sbjct: 285 NLRPDIA 291



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 128/263 (48%), Gaps = 2/263 (0%)

Query: 9   DVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           +V R L++ G  + ++++F ++I    K+ + +    +Y  M+ +   PN  T   LI+ 
Sbjct: 138 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 197

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
             K G L + V++  ++   RC P V+  +SLI    +  ++++ + +   M +  +  +
Sbjct: 198 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 257

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              +S+I+++  K    + A+ +  E+ L+   +  +F+Y   I   C+ GK++EAN + 
Sbjct: 258 VYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIR 317

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + ME  G +P   T+ +LI G     RI E++ +  +M+     P     N  I  L + 
Sbjct: 318 KGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 377

Query: 247 GNAKQANGMLTLALDKGFSPNEI 269
           G   + + ++ LA     S  E+
Sbjct: 378 GMPNEVDHVMRLASGGASSIQEV 400



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 1/209 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  V   +   G   + +++N LI+   K         +YQ M      P+  T  +
Sbjct: 169 LEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSS 228

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRK 122
           LI   C+ GQL   + +   +   R  P V   + +I  + ++ R +E + LL  + LR 
Sbjct: 229 LIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRP 288

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           ++      Y+ ++    K   ++ A ++ + M ++G   + + YT  I  YC   +I EA
Sbjct: 289 DIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEA 348

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKA 211
                EM  AG  P   T N  I    KA
Sbjct: 349 IMFFHEMVEAGCSPDSITVNCFISCLLKA 377


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 175/377 (46%), Gaps = 5/377 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  + A +V R + +R       ++ TL+  + K +R D    +   M      P+   
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI  LCK G L     ++D +  K C P  +   +LI  +  + ++++ + LL+RM+
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
               I + + Y  ++   VK R    A+ +   M +RG+  N  +Y+  I    + GK E
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           EA  L ++M   G KP    +++L++G  +  +  E+     +M++   LP+   ++ ++
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
           +   + G  ++A  +       G S N+  YS LI G    G ++E + ++ +M    I 
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIM---KSHSLVPGVDIYESLV-GIHLEKGNKAK 356
           P   AY+S+I  LC  G ++ A K +  M   +     P V  Y  L+ G+ ++K + ++
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK-DISR 558

Query: 357 ALHLCEEMVSEGLKPST 373
           A+ L   M+  G  P  
Sbjct: 559 AVDLLNSMLDRGCDPDV 575



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 4/361 (1%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G S S + +N LI  + K      V ++  +M      PNE T  TLI  LC  G+
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L   V +L+R+   +C P  +   +LI  ++++ R  + + LL  M  +    +   YS+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K    E A+ ++ +M ++G   N  VY+  +   C  GK  EA  ++  M  +G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P   T++ L++G  K    EE++   ++M       +   ++ +I  LC  G  K+A 
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM---EYKSISPTLPAYTSLI 310
            + +  L  G  P+ + YS +I G    G +   LKLY+EM   E     P +  Y  L+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA-KALHLCEEMVSEGL 369
             LC    +  A      M      P V    + +    EK N   K     EE+V   L
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLL 607

Query: 370 K 370
           K
Sbjct: 608 K 608



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 157/344 (45%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           +SFN +I  + K    D    +++ M E    P+  T  TL+  LCK  ++   V +LD 
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +  + CSP  ++   LI  + ++  +     L+  M  K  + + + Y+ +++       
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ + E M+      N   Y T I    +  +  +A  L+  ME  G       +++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  K  + EE++S   +M  +   P+   ++ ++  LC  G   +A  +L   +  G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             PN  TYS L+ G+ K G  +E ++++ EM+    S     Y+ LI  LC  G+++EA 
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
             +  M +  + P    Y S++      G+   AL L  EM+ +
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 5/259 (1%)

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML-----KRGFSANSFVYTTF 169
           LL R+  +N +    ++ ++  A  K    + A+ ++  M+     KR   + + V    
Sbjct: 99  LLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVI 158

Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
           I     +  +E  + ++    N  + P   +FNL+I+   K + ++ ++     M  RK 
Sbjct: 159 INEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKC 218

Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
           LP    +  ++  LC+     +A  +L     +G SP+ + Y+ LI G  K+G++  V K
Sbjct: 219 LPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L   M  K   P    Y +LI  LC  GKL++A    + M S   +P    Y +L+   +
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338

Query: 350 EKGNKAKALHLCEEMVSEG 368
           ++     A+ L   M   G
Sbjct: 339 KQRRATDAVRLLSSMEERG 357


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 157/370 (42%), Gaps = 52/370 (14%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIR 62
           F V FD CR + +    L                   LVW  Y+ +LE   YP       
Sbjct: 86  FWVPFDTCRKVLEHLMKLKYFK---------------LVWGFYEEILE-CGYPASLYFFN 129

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L+   CK G ++    + D I      P V+                            
Sbjct: 130 ILMHRFCKDGDIRIAQSVFDAITKWGLRPSVV---------------------------- 161

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                  +Y+ ++   +++ +L+    +   ML  G   + + Y+  I   C+  KI++A
Sbjct: 162 -------SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDA 214

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
           N L  EM   GL P   TF  LI+G  K  R++ ++   +QM+S+ L P    +N +I  
Sbjct: 215 NELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 274

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G+ KQA+ ++     KG  P++ITY+ LI G  K+G++    +    M  ++    
Sbjct: 275 LCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLD 334

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              YT+LIS LC+ G   +A+K  + M S  L P    Y  ++    +KG+  K   L +
Sbjct: 335 DVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLK 394

Query: 363 EMVSEGLKPS 372
           EM  +G  PS
Sbjct: 395 EMQRDGHVPS 404



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 129/277 (46%), Gaps = 3/277 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ +  FD    + + G   S++S+NTL++   +    D  +R+   ML +   P+  T
Sbjct: 141 IRIAQSVFDA---ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYT 197

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 198 YSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQML 257

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            +++  D I Y+ ++Y   K  +L+ A  + +EM  +G   +   YTT I   C+ G ++
Sbjct: 258 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLD 317

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M     +  D  +  LI G  +     ++     +M+S  L P    +  +I
Sbjct: 318 TAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMII 377

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
              C+ G+  + + +L      G  P+ +TY+ L+ G
Sbjct: 378 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score = 88.2 bits (217), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  + +   +  S  +V++  I AY 
Sbjct: 7   TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGLITAYL 66

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 67  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 125

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 126 YFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 185

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 186 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGR 245

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 246 VDLAMEIYKQMLSQSLSPD 264


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 172/339 (50%), Gaps = 8/339 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNT---LIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           E AF+ CR +++   S    S  T   +I  + K+ R D    + + M++    P+ AT 
Sbjct: 28  EQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATH 87

Query: 62  RTLISALCKGGQLQT---YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKR 118
             LI+ LCK  ++Q    ++  ++R    R S     N SL+  + + +++ +   +   
Sbjct: 88  SMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYN-SLLNSLCKAKKVHQAFAIFST 146

Query: 119 ML-RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
           M+  ++++ D ++YS+++    K+  L  A  +Y++M+      N   Y  F+      G
Sbjct: 147 MVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKG 206

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +I +A  + +EM +AG  P   T++ LI G + A++ +++    E M+SR   P+   +N
Sbjct: 207 RIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYN 266

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++  LC+     +A+ +    +++G  P+++TY+ L+ G+   G+I++ ++++ EM  K
Sbjct: 267 CLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 326

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
              P + AY  L+    + GK  EA + F++M S    P
Sbjct: 327 GHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 155/335 (46%), Gaps = 2/335 (0%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHML-ENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           S  S+N+L++ + K+ +    + I+  M+ E    P+  +   LI   CK  +L     +
Sbjct: 120 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKL 179

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
             ++    C P V    + +  ++++ RI +   + + M+      D I YS +++    
Sbjct: 180 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
            R  + A  ++E M+ RG   N+  Y   +   C+  K +EA+ L ++M   G  P   T
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           +  L+ G     +IE+++   ++M+S+   P   A+N +++     G   +A  +  + +
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK-SISPTLPAYTSLISSLCQCGKL 319
            +   P+ ++++ +I G +K   + + ++++  ME     SP L  Y SLI  LC   +L
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 419

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
            EA K FK +    L P    +  L+      G+K
Sbjct: 420 SEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGHK 454



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 145/305 (47%), Gaps = 1/305 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +R     ++S++ LI    K D      ++Y+ M++    PN  T    ++ L + G+
Sbjct: 148 VSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGR 207

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     + + +    CSP VI  ++LI       + ++   L + M+ +    + + Y+ 
Sbjct: 208 IADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNC 267

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   K    + A  ++ +M++RG   +   YTT +  +C  GKIE+A  +  EM + G
Sbjct: 268 LLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 327

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    +N L++G  +A +  E+    + M+SR+  P   + N MI  L +      A 
Sbjct: 328 HDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAV 387

Query: 254 GMLT-LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +   +  D G SP+ +TY+ LI G   E  + E +K++ E++   +SP   A+  L+ +
Sbjct: 388 EVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447

Query: 313 LCQCG 317
           +   G
Sbjct: 448 MYAAG 452



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 155/334 (46%), Gaps = 4/334 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI--RYPNEATIRTLISALCKGGQ 73
           +RG+   + + + LI+ + K+D+        Q M   I  R  +  +  +L+++LCK  +
Sbjct: 77  KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKK 136

Query: 74  L-QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           + Q +      +  +   P V+  + LI    + + +     L K+M+  N + +   Y+
Sbjct: 137 VHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 196

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
             +   ++   +  A  VYEEM+  G S +   Y+T I  +    K ++A+ L + M + 
Sbjct: 197 AFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   T+N L+ G  K  + +E+     +M+ R   P    +  ++   C  G  +QA
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +    + KG  P+ + Y+ L+ G+ + G+  E  +L+  M  +   P   ++  +I  
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDG 376

Query: 313 LCQCGKLEEADKYFKIM-KSHSLVPGVDIYESLV 345
           L +  +L++A + F+ M + H   P +  Y SL+
Sbjct: 377 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 8/218 (3%)

Query: 162 NSFVYTTFIGAYCEYGKIEEA--NC-LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           N+  +T F+G  C+ GKIE+A   C  MQE  ++   P   T + +I+   KA R++ +L
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE---ITYSHLI 275
           S  E M+ R   P  +  + +I  LC+    ++A   L   +++  S       +Y+ L+
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQ-GMNRTISTRASSCFSYNSLL 128

Query: 276 GGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
               K  ++ +   ++  M   +S+ P + +Y+ LI   C+  +L  A+K +K M   + 
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           VP V  Y + +   + KG  A A  + EEM+S G  P 
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 8/216 (3%)

Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
           + I   C+ G+++ A  L++ M   G  P   T ++LI    KA +I+E+  +  Q M+R
Sbjct: 54  SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL-QGMNR 112

Query: 228 KL---LPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGE 283
            +     SC ++N ++  LC+     QA  +  T+  ++   P+ ++YS LI G+ K  E
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           +    KLY +M   +  P +  Y + ++ L + G++ +A   ++ M S    P V  Y +
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232

Query: 344 LV-GIHLEKGNKAKALHLCEEMVSEGLKP-STSYLC 377
           L+ G  L + +  +A  L E M+S G +P + +Y C
Sbjct: 233 LIHGFSLARKHD-QAHELFEAMISRGCRPNAVTYNC 267



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 101/207 (48%), Gaps = 1/207 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           R  + A ++   +  RG   + +++N L+H + K  + D    +++ M+E    P++ T 
Sbjct: 241 RKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTY 300

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            TL+   C  G+++  V++ D +  K   P V+    L+    +  +  E   L + M+ 
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVS 360

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAYCEYGKIE 180
           +    DT+++++++    K + L+ A+ V+E M +  G S +   Y + I   C   ++ 
Sbjct: 361 RECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS 420

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEG 207
           EA  + +E++   L P    FN+L+E 
Sbjct: 421 EAMKVFKEIDRLKLSPDPHAFNVLLEA 447


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 162/357 (45%), Gaps = 4/357 (1%)

Query: 19  FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYV 78
           FSLS  SF   +    K        ++   M      P+  T   LI+ +CK G+L   +
Sbjct: 80  FSLSGFSF--YVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 137

Query: 79  DMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAK 138
             L+ +    C P VI +  ++  +    R  +   LL  MLRK      + +++++   
Sbjct: 138 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 197

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
            +   L  A+ + E+M   G + NS  Y   +  +C+  K++ A   +  M + G  P  
Sbjct: 198 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 257

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            T+N L+    K  +++ ++    Q+ S+   P    +N +I  L + G  ++A  +L  
Sbjct: 258 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 317

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
              KG  P+ ITYS L+ G ++EG++ E +K ++++E   I P    Y S++  LC+  +
Sbjct: 318 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 377

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLV-GIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            + A  +   M S    P    Y  L+ GI  E G   +AL L  E+ S GL   +S
Sbjct: 378 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYE-GLAKEALDLLNELCSRGLVKKSS 433



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 132/277 (47%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G   ++I+ N ++  +  + R     ++   ML     P+  T   LI+ LC+ G L   
Sbjct: 147 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 206

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           +D+L+++    C+P  +    L+    +E++++  +  L  M+ +    D + Y+ ++ A
Sbjct: 207 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 266

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K   ++ A+ +  ++  +G S     Y T I    + GK E A  L+ EM   GLKP 
Sbjct: 267 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 326

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T++ L+ G ++  +++E++ +   +    + P+   +N ++  LC+     +A   L 
Sbjct: 327 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 386

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
             + K   P E TY+ LI G A EG  +E L L  E+
Sbjct: 387 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 114/233 (48%)

Query: 3   LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
           L   A D+   +   G + + +S+N L+H   K  + D        M+    YP+  T  
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TL++ALCK G++   V++L+++  K CSP++I   ++I  + +  + E  + LL  M RK
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
            +  D I YS +V    +   ++ A+  + ++   G   N+  Y + +   C+  + + A
Sbjct: 322 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 381

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
              +  M +   KP + T+ +LIEG A     +E+L    ++ SR L+   SA
Sbjct: 382 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 164/347 (47%), Gaps = 10/347 (2%)

Query: 4   FEVAFDVCRYLEQR-GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
            + A D+ R +EQ+ G + +   +N  +H + KS +      + ++M +    P+  T  
Sbjct: 34  LQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFN 93

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           TLI+ LCK G+L     +LD +     +  ++   +LI  +    R  E +++++ M   
Sbjct: 94  TLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGM--- 150

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEE 181
               DT  Y+ I++   K   ++ A    EEM +R G S ++F Y+  I   C+   + +
Sbjct: 151 TTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRK 210

Query: 182 ANCLMQEMENAGLKPYDET---FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
           A+ L+QEM   G K    +   FN L++G  KA+ ++ +      M+     P    ++ 
Sbjct: 211 ADELLQEM--IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
           +I  LC CG+  +   +L   + +G  P+ +TY+ L+ G  K G++ E  +L   M    
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
            +P    Y+ +   LC+  KL+ A+     ++    V  V  +E+L+
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 6/312 (1%)

Query: 64  LISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           L+ A C  G+LQ  +D+L  +  +   +P   +    +  + +  ++ E M ++K M   
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               D + ++ ++    K   L+ A  V +EM + GF+AN   Y T I      G+  EA
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK-LLPSCSAFNEMIR 241
             +MQ M      P  +T+N +I G  K+  I+ +  + E+M  R    P    ++ +I 
Sbjct: 144 VLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 242 RLCECGNAKQANGMLTLALD-KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
            LC+  N ++A+ +L   +  K    + + ++ L+ GY K  ++    +L   M     +
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCA 260

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P +  Y+++I  LC+CG +++     + M S    P V  Y  LV    + G   +A  L
Sbjct: 261 PDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRL 320

Query: 361 CEEMVSEGLKPS 372
            + M+ +G  P+
Sbjct: 321 VKRMLEDGCTPN 332



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 5/207 (2%)

Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEME-NAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
           +++ Y   + A+C  G+++ A  L++EME   G+ P    +N  +    K+ ++ E++  
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            + M      P    FN +I  LC+ G   +A  +L      GF+ N +TY+ LI G + 
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 281 EGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS-LVPGVD 339
            G   E + +   M+  + +P    Y ++I   C+ G+++ A  + + MK  +   P   
Sbjct: 137 AGRSGEAVLV---MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVS 366
            Y  L+    +  N  KA  L +EM+ 
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIG 220



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 25/132 (18%), Positives = 65/132 (49%), Gaps = 1/132 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G +  +++++T+I  + +    D  + + + M+     P+  T   L++ LCK G++ 
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               ++ R+    C+P  +  + +   + + ++++    LL  +  K  + D +A+  ++
Sbjct: 316 EACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375

Query: 136 YAKVKMRNLESA 147
            + VK R L+ A
Sbjct: 376 LS-VKKRLLDRA 386


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 169/366 (46%), Gaps = 17/366 (4%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+NTLIH      + +L   I+  ML     P+ AT   LI   C+ G+      +L  +
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM 395

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI----------------HDT 128
                 P  +     IL+ +  + I+  ++    ++ + MI                 D 
Sbjct: 396 QITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDV 455

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            +++ I+ +  +  N+  A  VY+ M++ G+  +   Y + +   C+ G + +A   M  
Sbjct: 456 ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVY 515

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           +        ++T N L+ G  K   ++E+L  CE+M++R +LP    +  ++   C+ G 
Sbjct: 516 LLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGK 575

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK-SISPTLPAYT 307
              A  +L + L+KG  P+ I Y+ L+ G   EG+++    ++ E+  K  +     AY 
Sbjct: 576 VVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYN 635

Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
           S+++   + G++ E ++  + M  + + P    Y  L+  +++KG  ++ L+L  +MV E
Sbjct: 636 SMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKE 695

Query: 368 GLKPST 373
           G+KP  
Sbjct: 696 GIKPDN 701



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/379 (22%), Positives = 181/379 (47%), Gaps = 3/379 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G+   + ++ +L+  + +            ++LE     +E T+ TL+ 
Sbjct: 474 AFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLV 533

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            +CK G L   +D+ +++  +   P     T L+    +  ++   ++LL+ ML K ++ 
Sbjct: 534 GICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVP 593

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEML-KRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
           DTIAY+ ++   V    +++A  +++E++ K G  A+   Y + +  Y + G+I E   L
Sbjct: 594 DTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERL 653

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           M+ M    + P   ++N+L+ G  K  ++  +L     M+   + P    +  +I  LCE
Sbjct: 654 MRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE 713

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G  + A   L   + +G  P+ + +  LI  ++++ ++   L+L+  M++  +SP+   
Sbjct: 714 YGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKT 773

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y ++++ L +   L+++ +    M    L P    Y +L+      G+   A  L E+M 
Sbjct: 774 YVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMK 833

Query: 366 SEGLKPSTSYLCSASTCRG 384
           + G+ PS   +  +S  RG
Sbjct: 834 ALGVVPSE--VAESSIVRG 850



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 165/357 (46%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G     I++N++++   K  + + + R+ ++M EN  YP+ A+   L+    K GQL 
Sbjct: 624 KEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLS 683

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +   +  +   P  +    LI  + +   IE  +  L++M+ + +  D +A+ +++
Sbjct: 684 RTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILI 743

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
            A  +   + +AL ++  M     S +S  Y   +        ++++  ++ +M  +GL+
Sbjct: 744 KAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQ 803

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +  LI    +   I+ +    E M +  ++PS  A + ++R LC+CG  ++A  +
Sbjct: 804 PKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIV 863

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
            +  +  G  P   T++ L+ G  KE +I +   L   ME   +   +  Y  LI+ LC 
Sbjct: 864 FSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCN 923

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
              + +A   ++ MKS  L+P +  Y +L G     G       L +++   G+ PS
Sbjct: 924 KKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 980



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 186/417 (44%), Gaps = 53/417 (12%)

Query: 13  YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI-RTLISALCKG 71
           ++++ GF  SL S N +++ +   ++++ VW   +  L+  ++P + T    ++++LC  
Sbjct: 185 FMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDR-KFPLDVTTCNIVLNSLCTQ 243

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSL-----------ILRIIQE-------------- 106
           G+L     ML ++   R    V  NT L            LRI+ +              
Sbjct: 244 GKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYN 303

Query: 107 ---------ERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
                    +R     +LLKRM   N+  D  +Y+ +++       +  A+ ++ +ML++
Sbjct: 304 IMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQ 363

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE-E 216
               +   YT  I  YC  G+ +EA  ++ EM+  G++P + +    I  C  A  I+ +
Sbjct: 364 SLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPD 423

Query: 217 SLSYC--------------EQMMSR-KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
            ++Y               +Q MSR K+    ++FN +I   C+ GN  +A  +    + 
Sbjct: 424 VITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR 483

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
            G+ P+  TY  L+ G  + G + +  +    +  K+ +       +L+  +C+ G L+E
Sbjct: 484 HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDE 543

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLC 377
           A    + M + +++P    Y  L+    ++G    AL L + M+ +GL P T +Y C
Sbjct: 544 ALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTC 600



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 146/320 (45%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           S+N L+H   K  +      +Y+ M++    P+  T R LI  LC+ G ++  V  L+++
Sbjct: 668 SYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 727

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
             +   P  +    LI    ++ ++   + L   M   +M   +  Y  +V   ++   L
Sbjct: 728 VLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWL 787

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + +  +  +M++ G       Y   I A C  G I+ A  L ++M+  G+ P +   + +
Sbjct: 788 QQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSI 847

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G  K  ++EE++     +M   ++P+ + F  ++  LC+      A  +  L    G 
Sbjct: 848 VRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGL 907

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
             + +TY+ LI G   +  I + L LY EM+ K + P +  Y +L  ++   G +++ +K
Sbjct: 908 KVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEK 967

Query: 325 YFKIMKSHSLVPGVDIYESL 344
             K ++   +VP     ESL
Sbjct: 968 LLKDIEDRGIVPSYKHPESL 987



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 1/220 (0%)

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           + R    N F     + AY + GK+ +A   +  M+  G K    + N ++       + 
Sbjct: 152 ISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKS 211

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           E    + ++ + RK     +  N ++  LC  G   +A  ML   +     PN +TY+ +
Sbjct: 212 EYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQ-KMKNCRLPNAVTYNTI 270

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           +  Y K+G  +  L++  +ME   I   L  Y  +I  LC+  +   A    K M+  +L
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
            P    Y +L+     +G    A+++  +M+ + LKPS +
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVA 370



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 112/267 (41%), Gaps = 38/267 (14%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  +  Y++    S S  ++  +++ + + +     + I   M+E+   P       LI+
Sbjct: 755 ALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALIN 814

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C+ G +    ++ + +      P  +  +S++  + +  ++EE +++   ++R  M+ 
Sbjct: 815 AKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV- 873

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            TIA                                   +TT +   C+  KI++A  L 
Sbjct: 874 PTIA----------------------------------TFTTLMHGLCKEFKIDDAFHLK 899

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           Q ME+ GLK    T+N+LI G    K I ++L   E+M S+ LLP+ + +  +   +   
Sbjct: 900 QLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYAT 959

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSH 273
           G  +    +L    D+G  P   +Y H
Sbjct: 960 GTMQDGEKLLKDIEDRGIVP---SYKH 983


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 1/313 (0%)

Query: 57  NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
           + AT   ++   C+ G+ +   ++  R+      P V+  T+ I  + +   +++   +L
Sbjct: 219 DNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVL 278

Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG-FSANSFVYTTFIGAYCE 175
           + M+ K +  +   ++ ++    K+   E A  ++ +++K   +  N   YT  IG YC+
Sbjct: 279 EEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCK 338

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK+  A  L+  M   GL P   T+  LI G  K      +     +M      P+   
Sbjct: 339 EGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYT 398

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I  LC+ G  ++A  +L +A ++G   +++TY+ +I  + K+G I   L L+  M 
Sbjct: 399 YNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMA 458

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
                P +  YT+LI+  CQ  ++EE+ K F    +  LVP    Y S++  + + G   
Sbjct: 459 ENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKST 518

Query: 356 KALHLCEEMVSEG 368
            AL + E MV  G
Sbjct: 519 SALRVFERMVQNG 531



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 148/359 (41%), Gaps = 36/359 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++ +GF L   +   ++ V  +  R   V  +++ MLE    PN       I  LCK   
Sbjct: 211 MQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAY 270

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLI----------------LRIIQ------------ 105
           ++    +L+ +  K   P V  +TSLI                L++I+            
Sbjct: 271 VKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 330

Query: 106 --------EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
                   E ++    +LL RM+ + +  +T  Y+ ++    K  +   A  +  +M + 
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRRE 390

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           GF  N + Y   I   C+ GKI+EA  +++   N GL+    T+ ++I    K   I  +
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           L    +M      P    +  +I R C+    +++  +    L     P + TY+ +I G
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
           Y K G+    L+++  M           Y +LIS LC+  +LEEA   ++ M    LVP
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 18/320 (5%)

Query: 61  IRTLISALCKGGQLQTYVDMLD--RIHGKRCSPMVIVNTSLILR-------IIQEERIEE 111
           +R +++A  + G+L    DM+   R HG    P  +   + +LR            ++ +
Sbjct: 117 MRRMVAAFAEAGRLPEAADMVFEMRSHGL---PFCVETANWVLRAGLDTGSFAYARKVFD 173

Query: 112 GMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
           GMV      R  ++ D  ++  ++    +   +E    +   M  +GF  ++   T  + 
Sbjct: 174 GMVT-----RGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVR 228

Query: 172 AYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP 231
            +C+ G+  + + L + M   G  P    +   I+G  K   ++++    E+M+++ L P
Sbjct: 229 VFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKP 288

Query: 232 SCSAFNEMIRRLCECGNAKQANGM-LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           +      +I  LC+ G  ++A  + L L     + PN  TY+ +IGGY KEG++     L
Sbjct: 289 NVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 348

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
              M  + ++P    YT+LIS  C+ G    A +    M+     P +  Y +L+    +
Sbjct: 349 LGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCK 408

Query: 351 KGNKAKALHLCEEMVSEGLK 370
           KG   +A  +     ++GL+
Sbjct: 409 KGKIQEAYKVLRMANNQGLQ 428



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 1/184 (0%)

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL P   +F  LI GC +  R+EE  +    M  +      +    ++R  C+ G  + 
Sbjct: 179 GGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRD 238

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
            + +    L+ G  PN + Y+  I G  K   +++   +  EM  K + P +  +TSLI+
Sbjct: 239 VSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLIN 298

Query: 312 SLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
            LC+ G  E A + F K++KS S  P V  Y  ++G + ++G  A+A  L   MV +GL 
Sbjct: 299 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 358

Query: 371 PSTS 374
           P+T+
Sbjct: 359 PNTN 362



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 143/333 (42%), Gaps = 5/333 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLI 65
           AF V   +  +G   ++ +  +LI+ + K    +  +R++  ++++  Y PN  T   +I
Sbjct: 274 AFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 333

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
              CK G+L     +L R+  +  +P     T+LI    +E        L+ +M R+   
Sbjct: 334 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQ 393

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
            +   Y+ ++    K   ++ A  V      +G   +   YT  I  +C+ G I  A  L
Sbjct: 394 PNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDL 453

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
              M   G  P   T+  LI    + +++EES    ++ ++ +L+P+   +  MI   C+
Sbjct: 454 FNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCK 513

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G +  A  +    +  G   + ITY  LI G  KE  ++E   LY  M  K + P    
Sbjct: 514 VGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVT 573

Query: 306 YTSLISSLCQCGKLEEA----DKYFKIMKSHSL 334
             +L    C+  K   A    D+  K  K+H++
Sbjct: 574 PVTLAFEYCRREKAVVAVSILDRLDKRRKNHTV 606



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 124/279 (44%), Gaps = 3/279 (1%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
           M+E    PN  T  TLIS  CK G      ++++++  +   P +    +LI  + ++ +
Sbjct: 352 MVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGK 411

Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
           I+E   +L+    + +  D + Y++++    K  ++  AL ++  M + G   +   YTT
Sbjct: 412 IQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTT 471

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
            I  YC+  ++EE+  L  +     L P  +T+  +I G  K  +   +L   E+M+   
Sbjct: 472 LIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
                  +  +I  LC+    ++A  +    LDK   P E+T   L   Y +  +    +
Sbjct: 532 CQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAV 591

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
            +   ++ +  + T+     L+  L   G +E+A  + K
Sbjct: 592 SILDRLDKRRKNHTV---NVLVRKLSAIGHVEDASLFLK 627


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 181/372 (48%), Gaps = 10/372 (2%)

Query: 10  VCRYLEQRG---FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           VCR  EQ G     L++ +++ L+    ++ R DL   ++  +L      ++ T  TL+ 
Sbjct: 143 VCR--EQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLK 200

Query: 67  ALCKGGQLQTYVD-MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN-- 123
            LC   + +  V+ +L R+    C P V  + S+IL+ + +  + +  + L +M+ K   
Sbjct: 201 CLCYANRTEEAVNVLLHRMSELGCVPNVF-SYSIILKGLCDNSMSQRALDLFQMMAKEGG 259

Query: 124 -MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
               + +AY+ +++   K      A  ++ EM ++G   +   Y   I A C+   +++A
Sbjct: 260 ACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKA 319

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             ++++M   G +P   T+N +I G A   R++E+     +M SR L+P+    N  +  
Sbjct: 320 ELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLAS 379

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           LC+ G +K+A  +      KG  P+ ++Y  L+ GYA EG   +++ L+  M+   I+  
Sbjct: 380 LCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAAD 439

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
              +  LI +  + G +++A   F  M+   + P V  Y +++      G    A+    
Sbjct: 440 CRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFN 499

Query: 363 EMVSEGLKPSTS 374
           +MV+ G++P+T+
Sbjct: 500 QMVARGIQPNTA 511



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 166/365 (45%), Gaps = 4/365 (1%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQT 76
           G  +  I+ +TL+  +  ++R +    +  H +  +   PN  +   ++  LC     Q 
Sbjct: 187 GLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQR 246

Query: 77  YVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLI 134
            +D+   +   G  CSP V+   ++I    +E    +   L   M R+ +  D + Y+LI
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           + A  K R ++ A +V  +M   G   ++  Y   I  Y   G+++EA  + ++M++ GL
Sbjct: 307 IDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGL 366

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P     N  +    K  R +E+    + M ++   P   ++  ++      G      G
Sbjct: 367 IPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG 426

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +       G + +   ++ LI  YAK G + + + ++ EM+ + +SP +  Y+++IS+  
Sbjct: 427 LFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFS 486

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL-KPST 373
           + G+L +A + F  M +  + P   +Y S++      G   KA  L  EM+++G+ +P  
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546

Query: 374 SYLCS 378
            +  S
Sbjct: 547 VFFNS 551



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/361 (20%), Positives = 168/361 (46%), Gaps = 1/361 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G    ++++N +I  + K+   D    + + M  N   P+  T   +I      G+
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L+    M  ++  +   P +++  S +  + +  R +E   +   M  K    D ++Y  
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++           + ++  M   G +A+  V+   I AY + G +++A  +  EM+  G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T++ +I   ++  R+ +++    QM++R + P+ + ++ +I+  C  G   +A 
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530

Query: 254 GMLTLALDKGFS-PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +++  ++KG   P+ + ++ +I    K+G + +   ++  +      P +  +TSLI  
Sbjct: 531 ELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDG 590

Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            C  GK+++A K    M+   +   +  Y +L+  + + G     L L  EM  +G+KP+
Sbjct: 591 YCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPN 650

Query: 373 T 373
           T
Sbjct: 651 T 651



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/366 (20%), Positives = 163/366 (44%), Gaps = 1/366 (0%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V R +   G     +++N +IH      R     ++++ M      PN     + +++LC
Sbjct: 322 VLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLC 381

Query: 70  KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
           K G+ +   ++ D +  K   P ++   +L+     E    + + L   M    +  D  
Sbjct: 382 KHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCR 441

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
            ++++++A  K   ++ A++++ EM ++G S +   Y+T I A+   G++ +A     +M
Sbjct: 442 VFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQM 501

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL-LPSCSAFNEMIRRLCECGN 248
              G++P    ++ +I+G      + ++     +M+++ +  P    FN +I  LC+ G 
Sbjct: 502 VARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGR 561

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A+ +  L  D G  P+ IT++ LI GY   G++ +  K+   ME   +   +  Y++
Sbjct: 562 VMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYST 621

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           L+    + G++ +    F+ M+   + P    Y  ++      G    A     EM+  G
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 369 LKPSTS 374
              + S
Sbjct: 682 TTVTVS 687



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/368 (20%), Positives = 164/368 (44%), Gaps = 9/368 (2%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G +     FN LIH   K    D    I+  M +    P+  T  T+ISA  + G+
Sbjct: 431 MKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV----LLKRMLRKNMIH-DT 128
           L   ++  +++  +   P    NT++   IIQ   +  G+V    L+  M+ K +   D 
Sbjct: 491 LTDAMEKFNQMVARGIQP----NTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
           + ++ ++ +  K   +  A  +++ +   G   +   +T+ I  YC  GK+++A  ++  
Sbjct: 547 VFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDA 606

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           ME  G++    T++ L++G  K  RI + L+   +M  + + P+   +  M+  L   G 
Sbjct: 607 MEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGR 666

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A       ++ G +     Y  ++GG  +     E + L+ ++   ++  ++    +
Sbjct: 667 TVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNT 726

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+++ +  + EEA + F  + +  L+P    Y  ++   L+ G    A ++   M   G
Sbjct: 727 MINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSG 786

Query: 369 LKPSTSYL 376
           + P +  L
Sbjct: 787 IVPGSRLL 794



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 129/299 (43%)

Query: 23  LISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
           ++ FN++I+ + K  R      I+  + +    P+  T  +LI   C  G++     +LD
Sbjct: 546 IVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILD 605

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
            +        ++  ++L+    +  RI +G+ L + M RK +  +T+ Y +++    +  
Sbjct: 606 AMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
              +A   + EM++ G +    +Y   +G  C     +EA  L Q++    +K      N
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            +I    K +R EE+      + +  LLP+ S +  MI  L + G  + AN M +     
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS 785

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           G  P     + +I    ++GEI +      +++ K I       + ++S   + GK  E
Sbjct: 786 GIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHE 844



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 5/252 (1%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA-NCLMQEM 189
           YS+++    + R  +  LV++  +L+ G   +    +T +   C   + EEA N L+  M
Sbjct: 160 YSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRM 219

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK---LLPSCSAFNEMIRRLCEC 246
              G  P   +++++++G       + +L    QMM+++     P+  A+N +I    + 
Sbjct: 220 SELGCVPNVFSYSIILKGLCDNSMSQRALDLF-QMMAKEGGACSPNVVAYNTVIHGFFKE 278

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G   +A  +      +G  P+ +TY+ +I    K   + +   +  +M      P    Y
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             +I      G+L+EA K F+ MKS  L+P + I  S +    + G   +A  + + M +
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 367 EGLKPSTSYLCS 378
           +G KP     C+
Sbjct: 399 KGHKPDIVSYCT 410



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/349 (19%), Positives = 142/349 (40%), Gaps = 36/349 (10%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDR--------NDLVWR-------IYQHMLEN------ 52
           ++Q+G S  +++++T+I   ++  R        N +V R       +Y  +++       
Sbjct: 466 MQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG 525

Query: 53  ---------------IRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNT 97
                          I  P+     ++I++LCK G++    D+ D +      P VI  T
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFT 585

Query: 98  SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
           SLI       ++++   +L  M    +  D + YS ++    K   +   L ++ EM ++
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645

Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
           G   N+  Y   +      G+   A     EM  +G       + +++ G  +    +E+
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705

Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
           +   +++ +  +  S +  N MI  + +    ++A  +       G  PNE TY  +I  
Sbjct: 706 IILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIIN 765

Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
             K+G +++   ++  ME   I P       +I  L + G++ +A  Y 
Sbjct: 766 LLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814


>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           cujabensis]
          Length = 409

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 145/325 (44%), Gaps = 37/325 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G ++    + D I      P V+     
Sbjct: 121 LVWGFYEEILE-CGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVV----- 174

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +Y+ ++   +++ +L+    +   ML  G 
Sbjct: 175 ------------------------------SYNTLMNGYIRLGDLDEGFRLKSAMLASGX 204

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+  K++ AN L  EM   GL P   TF  LI+G  K  R++ ++ 
Sbjct: 205 XPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAME 264

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ TY+ LI G  
Sbjct: 265 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCC 324

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG++         M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P   
Sbjct: 325 KEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAG 384

Query: 340 IYESLVGIHLEKGNKAKALHLCEEM 364
            Y  ++    +KG+  K   L +EM
Sbjct: 385 TYTMIINEFCKKGDVWKGSKLLKEM 409



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 111/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     YEE+L+ G+ A+ + +   +  +C+ G I  A  +   +   GL+P  
Sbjct: 114 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 173

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M++    P    ++ +I  LC+      AN +   
Sbjct: 174 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDE 233

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   +++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 234 MLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 293

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 294 LKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIR 345



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 123/256 (48%), Gaps = 3/256 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R+ +  FD    + + G   S++S+NTL++   +    D  +R+   ML +   P+  T
Sbjct: 154 IRVAQSVFDA---ITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYT 210

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK  ++    ++ D +  K   P  +  T+LI    +  R++  M + K+ML
Sbjct: 211 YSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQML 270

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            ++++ D I Y+ ++Y   K  +L+ A  + +EM  +G   + F YTT I   C+ G ++
Sbjct: 271 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLD 330

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A    + M    ++  D  +  LI G  +  R  ++     +M+S  L P    +  +I
Sbjct: 331 TAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMII 390

Query: 241 RRLCECGNAKQANGML 256
              C+ G+  + + +L
Sbjct: 391 NEFCKKGDVWKGSKLL 406



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 115/244 (47%)

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           ++++++   K  ++  A  V++ + K G   +   Y T +  Y   G ++E   L   M 
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
            +G  P   T+++LI G  K  +++ +    ++M+ + L+P+   F  +I   C+ G   
Sbjct: 201 ASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 260

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A  +    L +   P+ ITY+ LI G  K+G++++   L  EM  K + P    YT+LI
Sbjct: 261 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLI 320

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
              C+ G L+ A  + K M   ++      Y +L+    ++G    A  +  EM+S GL 
Sbjct: 321 DGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLX 380

Query: 371 PSTS 374
           P   
Sbjct: 381 PDAG 384



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEML--KRGFSANSFVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L  K    ++ +V++  I AY 
Sbjct: 20  TMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYVFSGLITAYL 79

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + E+++      S 
Sbjct: 80  ESGFLRDAIECYRLTXEHKLWVPFD-TCRKVLEHLMKLKYFKLVWGFYEEILECGYPASL 138

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+ G+ + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 139 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 198

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M      P +  Y+ LI+ LC+  K++ A++ F  M    LVP    + +L+  H + G 
Sbjct: 199 MLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 258

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+ L P 
Sbjct: 259 VDLAMEIYKQMLSQSLLPD 277



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 85/173 (49%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   + ++F TLI    K+ R DL   IY+ ML     P+  T  TLI  LCK G L+ 
Sbjct: 237 KGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 296

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D++D +  K   P     T+LI    +E  ++      KRM+++N+  D +AY+ ++ 
Sbjct: 297 AHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALIS 356

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
              +      A  +  EML  G   ++  YT  I  +C+ G + + + L++EM
Sbjct: 357 GLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/384 (21%), Positives = 191/384 (49%), Gaps = 8/384 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           F+ + ++   + +      + ++++LIH + ++   D   R+Y+ ++E+    +  T   
Sbjct: 273 FDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNA 332

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +++  C+ G+++   ++   +  + C  +V  N  LI  + +  ++EE + + + + +K 
Sbjct: 333 MLNGFCRAGKIKESFELWMVMGKENCQTVVSYNI-LIKGLFENGKVEEAISIWELLCKKG 391

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              ++  Y ++++   K   L  AL +++E        +++ Y++ +   C+ G+++EA 
Sbjct: 392 CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAI 451

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            ++ +M+  G K      N LI G  +A ++E+++++  +M  +   P+  ++N +I+ L
Sbjct: 452 SIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGL 511

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+     +A   +   L+K + P+ IT S L+ G  +E +I+  L L+ +   K   P +
Sbjct: 512 CKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDI 571

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y  L+  LC   KLE+A + +  MK  + VP +    +L+    +  +  KA  + + 
Sbjct: 572 TMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDC 631

Query: 364 MVSEGLKPS-TSY------LCSAS 380
           ++ +GL P   SY      LCS S
Sbjct: 632 ILKDGLHPDIISYNITIKGLCSCS 655



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 156/338 (46%), Gaps = 3/338 (0%)

Query: 28  TLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
           T+I    K+  ++     +Q+M +     P   +  TL++A  +  +             
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 87  KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLES 146
              SP +     LI    ++++IE+ + LL  M  +N+  D  +Y  ++   VK+ +L  
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLI 205
           AL V++EM  RG  A+   Y   I  + ++G  ++   + + + ++  + P   T+N++I
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMI 264

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G  K  R +ESL   E+M   +       ++ +I  LCE GN   A  +    ++    
Sbjct: 265 NGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLV 324

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
            + +T++ ++ G+ + G+I+E  +L+  M  K    T+ +Y  LI  L + GK+EEA   
Sbjct: 325 VDAVTHNAMLNGFCRAGKIKESFELWMVMG-KENCQTVVSYNILIKGLFENGKVEEAISI 383

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
           ++++      P    Y  L+    + G   KAL + +E
Sbjct: 384 WELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKE 421



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 121/269 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + +  E     L   ++++++  + K  R D    I   M +     +      LI+
Sbjct: 415 ALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLIN 474

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
              +  +L+  ++    +  K CSP ++   +LI  + + ER  E    +K ML K    
Sbjct: 475 GFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKP 534

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D I  SL++    + + +E AL ++++ L +GF  +  +Y   +   C   K+E+A  L 
Sbjct: 535 DMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLY 594

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
             M+ +   P   T N L+EG  K +  E++    + ++   L P   ++N  I+ LC C
Sbjct: 595 SHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSC 654

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLI 275
                A   L  AL++G  P  +T++ L+
Sbjct: 655 SRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/310 (19%), Positives = 135/310 (43%), Gaps = 4/310 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  +   L ++G      ++  LIH + K+ R +   +I++   +     +     ++
Sbjct: 378 EEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSM 437

Query: 65  ISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           +  LCK G++   + +++++   G +  P V     LI   ++  ++E+ +   + M  K
Sbjct: 438 VDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC--NPLINGFVRASKLEDAINFFREMECK 495

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                 ++Y+ ++    K      A    +EML++ +  +    +  +   C+  KIE A
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMA 555

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L Q+  + G KP    +N+L+ G     ++E++L     M     +P+    N ++  
Sbjct: 556 LNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEG 615

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
           L +  + ++A+ +    L  G  P+ I+Y+  I G      I + ++   +   + I PT
Sbjct: 616 LYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPT 675

Query: 303 LPAYTSLISS 312
              +  L+ +
Sbjct: 676 AVTWNILVRA 685



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 1/218 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A +  R +E +G S +++S+NTLI  + K++R    +   + MLE    P+  T   
Sbjct: 482 LEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSL 541

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LC+  +++  +++  +   K   P + +   L+  +    ++E+ + L   M R  
Sbjct: 542 LMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRST 601

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
            + + +  + ++    K+R+ E A  +++ +LK G   +   Y   I   C   +I +A 
Sbjct: 602 CVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAI 661

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
             + +  N G+ P   T+N+L+   A   R    LS C
Sbjct: 662 EFLNDALNRGILPTAVTWNILVRA-AVNFRTSSVLSAC 698



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 1/247 (0%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           +Y+ ++ A V++   + A            S N   Y   I   C+  +IE+A  L+  M
Sbjct: 118 SYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWM 177

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            +  LKP   ++  LI G  K   +  +L   ++M  R ++   + +N +I    + G+ 
Sbjct: 178 WSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDY 237

Query: 250 KQANGMLT-LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
            +   +   L  D    PN +TY+ +I G  K G   E L+++  M        +  Y+S
Sbjct: 238 DKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSS 297

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           LI  LC+ G ++ A + +K +   SLV     + +++      G   ++  L   M  E 
Sbjct: 298 LIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN 357

Query: 369 LKPSTSY 375
            +   SY
Sbjct: 358 CQTVVSY 364



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 60/137 (43%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P   ++N ++    E     +A            SPN  TY+ LI    K+ +I++ + L
Sbjct: 114 PGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISL 173

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
              M  +++ P + +Y +LI+ + + G L  A K F  M    +V  V  Y  L+    +
Sbjct: 174 LDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFK 233

Query: 351 KGNKAKALHLCEEMVSE 367
            G+  K   + E +V +
Sbjct: 234 HGDYDKGKEIWERLVKD 250



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 1/101 (0%)

Query: 274 LIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
           +I  YAK     + L  +  M +     P + +Y +L+++  +  + + A+ + +  +S 
Sbjct: 86  VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + P +  Y  L+ I  +K    KA+ L + M S+ LKP  
Sbjct: 146 DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDV 186


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 155/353 (43%), Gaps = 1/353 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG S++L ++N  I  + ++ R     R+   M      P+  T  TLI  LCK    Q
Sbjct: 217 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQ 275

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L R+  + C P      ++I    +   ++E   LLK  + K  + D + Y  ++
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                  ++E AL ++ E   +G   +  VY + +   C  G I  A  +M EM   G  
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  +T+N++I G  K   I ++       + +  LP    FN +I   C+      A  +
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    + G +P+ ITY+ ++ G  K G++ EV + + EM  K   P    Y  LI + C+
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 515

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             K+EEA K    M    L P    + +L+      G+   A  L +++  +G
Sbjct: 516 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 13/358 (3%)

Query: 22  SLISFNTLIHVVTKSDRND------LVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +L +FN ++H + K  R D      L+ ++ Q  +      N  T    I  LC+ G+L 
Sbjct: 188 NLAAFNKVLHALCK--RGDVLEAGLLLGKVIQRGMS----INLFTYNIWIRGLCEAGRLP 241

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V ++D +       +V  NT LI  + ++   +E M  L+RM+ +  + D   Y+ I+
Sbjct: 242 EAVRLVDGMRAYAVPDVVTYNT-LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 300

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K+  ++ A  + ++ + +GF  +   Y + I   C  G +E A  L  E +  G+K
Sbjct: 301 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 360

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N L++G      I  +L    +M      P    +N +I  LC+ GN   A  +
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +  A+ KG+ P+  T++ LI GY K  ++   L+L   M    I+P    Y S+++ LC+
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK+ E ++ F+ M      P    Y  L+          +A  +  +M  EGL P  
Sbjct: 481 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 538



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 155/352 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++NTLI  + K           + M+     P++ T  T+I   CK   +Q   ++L
Sbjct: 257 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 316

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
                K   P  +   SLI  +  E  +E  + L      K +  D + Y+ +V      
Sbjct: 317 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 376

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  AL V  EM + G   +   Y   I   C+ G I +A  +M +    G  P   TF
Sbjct: 377 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 436

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G  K  +++ +L   E+M    + P    +N ++  LC+ G   + N      + 
Sbjct: 437 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 496

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI  + +  +++E  K+  +M  + + P   ++ +LI   C+ G LE 
Sbjct: 497 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 556

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           A   F+ ++        D + +L+G    K N   A  + +EM+S+G +  +
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADS 608



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 151/319 (47%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P++ T  +LI+ LC  G ++  +++ +    K   P ++V  SL+  +  +  I   + +
Sbjct: 326 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 385

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  M  +    D   Y++++    KM N+  A VV  + + +G+  + F + T I  YC+
Sbjct: 386 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 445

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K++ A  L++ M   G+ P   T+N ++ G  KA ++ E     ++M+ +   P+   
Sbjct: 446 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 505

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I   C     ++A+ ++     +G  P+ ++++ LI G+ + G+++    L+ ++E
Sbjct: 506 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 565

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K  S T   + +LI +      +  A+K F  M S         Y  L+    +  N  
Sbjct: 566 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 625

Query: 356 KALHLCEEMVSEGLKPSTS 374
           +A     EM+ +G  PS S
Sbjct: 626 RAYMHLVEMIKKGFIPSMS 644



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 139/316 (43%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+     +L+  LC  G +   + +++ +  + C P +     +I  + +   I +  V+
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +   + K  + D   ++ ++    K   L+SAL + E M + G + ++  Y + +   C+
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK+ E N   QEM   G  P   T+N+LIE   ++ ++EE+     +M    L P   +
Sbjct: 481 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 540

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN +I   C  G+ + A  +     +KG+S    T++ LIG ++ +  +    K++ EM 
Sbjct: 541 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML 600

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K        Y  LI   C+   ++ A  +   M     +P +  +  ++          
Sbjct: 601 SKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVF 660

Query: 356 KALHLCEEMVSEGLKP 371
           +A+ +   MV  G+ P
Sbjct: 661 QAVGIIHIMVKIGVVP 676



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 36/351 (10%)

Query: 57  NEATIRTL----ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEG 112
           + ATI  L    I A  + G+L+  VD  +R+    C P      +++  ++     ++ 
Sbjct: 48  SPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQA 107

Query: 113 MVLLKRMLRKNMIHD-------------------------------TIAYSLIVYAKVKM 141
             +  RML   +  D                                +AY  +V      
Sbjct: 108 HKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAH 167

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
            +   A  ++++ML      N   +   + A C+ G + EA  L+ ++   G+     T+
Sbjct: 168 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 227

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N+ I G  +A R+ E++   + M +   +P    +N +IR LC+    ++A   L   ++
Sbjct: 228 NIWIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 286

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           +G  P++ TY+ +I GY K   +QE  +L  +  +K   P    Y SLI+ LC  G +E 
Sbjct: 287 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 346

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           A + F   ++  + P + +Y SLV     +G    AL +  EM  EG  P 
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 397



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/387 (21%), Positives = 164/387 (42%), Gaps = 46/387 (11%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N ++  +  +  +D   ++Y  ML     P+  T    + + C   +    + +L   
Sbjct: 90  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL--- 146

Query: 85  HGKRCSPM--VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
              R  P    +   +++  +       +   L  +ML  ++  +  A++ +++A  K  
Sbjct: 147 ---RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 203

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA------------------NC 184
           ++  A ++  ++++RG S N F Y  +I   CE G++ EA                  N 
Sbjct: 204 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNT 263

Query: 185 L----------------MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           L                ++ M N G  P D T+N +I+G  K   ++E+    +  + + 
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 323

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            +P    +  +I  LC  G+ ++A  +   A  KG  P+ + Y+ L+ G   +G I   L
Sbjct: 324 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK--IMKSHSLVPGVDIYESLVG 346
           ++  EM  +   P +  Y  +I+ LC+ G + +A       IMK +  +P V  + +L+ 
Sbjct: 384 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY--LPDVFTFNTLID 441

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
            + ++     AL L E M   G+ P T
Sbjct: 442 GYCKRLKLDSALQLVERMWEYGIAPDT 468



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 124/250 (49%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G+   + +FNTLI    K  + D   ++ + M E    P+  T  ++++ LCK G++  
Sbjct: 427 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 486

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             +    +  K C P  I    LI    +  ++EE   ++ +M ++ +  D ++++ ++Y
Sbjct: 487 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +  +LE A ++++++ ++G+SA +  + T IGA+     +  A  +  EM + G + 
Sbjct: 547 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 606

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +LI+G  K   ++ +  +  +M+ +  +PS S F  +I  L       QA G++
Sbjct: 607 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 666

Query: 257 TLALDKGFSP 266
            + +  G  P
Sbjct: 667 HIMVKIGVVP 676



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 140/334 (41%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++    + +G    ++ +N+L+  +          ++   M E   +P+  T   +
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G +     +++    K   P V    +LI    +  +++  + L++RM    +
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DTI Y+ ++    K   +      ++EM+ +G   N   Y   I  +C   K+EEA+ 
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++ +M   GL P   +FN LI G  +   +E +    +++  +    +   FN +I    
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              N   A  +    L KG   +  TY  LI G  K   +        EM  K   P++ 
Sbjct: 585 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 644

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            +  +I+SL    ++ +A     IM    +VP V
Sbjct: 645 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 5/249 (2%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ I+ A V     + A  VY  ML  G S +   +T  + ++C   +   A  L++ +
Sbjct: 90  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 149

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            + G   Y      ++ G        ++    +QM+   + P+ +AFN+++  LC+ G+ 
Sbjct: 150 PHRGAVAY----CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 205

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +L   + +G S N  TY+  I G  + G + E ++L   M   ++ P +  Y +L
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 264

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+    +EA  Y + M +   +P    Y +++  + +     +A  L ++ V +G 
Sbjct: 265 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 324

Query: 370 KPSTSYLCS 378
            P     CS
Sbjct: 325 VPDQVTYCS 333


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 170/373 (45%), Gaps = 8/373 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A+ +   +  RG S  +++++++I  ++K+   D   +++  M++N   P+     +
Sbjct: 223 LDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 282

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   C  G+ +  + +  ++      P V+  T+L+  + +  +  E   +   ++++ 
Sbjct: 283 LVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRG 342

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALV----VYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
              D+  Y  +++        E ALV    + + M+K+G      ++   +GAY ++ K+
Sbjct: 343 HKPDSTTYGTLLHGYAT----EGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 398

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA  +   M   GL P    +  +++    A R++++LS    + S  L P+   F  +
Sbjct: 399 DEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTL 458

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC C    +   +    +D+G   + I ++ ++G   K+G + E   L+  M    I
Sbjct: 459 IHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGI 518

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y +LI   C  GK++EA K   +M  + + P    Y +++  + + G     L 
Sbjct: 519 EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLT 578

Query: 360 LCEEMVSEGLKPS 372
           L  EM  +G+ P 
Sbjct: 579 LLREMDGKGVNPG 591



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 178/376 (47%), Gaps = 17/376 (4%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVV----TKSDRNDLVWRIYQHMLENIRYPNEA 59
            ++AF     +   G  +S I F+ L+  +      SD  D+V R    M E    P+  
Sbjct: 115 LDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLR---RMPELGCKPDLF 171

Query: 60  TIRTLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
           +   L+  LC     Q  +D+L  +  H  RC   V+  T++I  +++E ++++   L  
Sbjct: 172 SYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFD 231

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            ML +    D + YS I+ A  K + ++ A  V+  M+K G   +  +YT+ +  YC  G
Sbjct: 232 AMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSG 291

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           K +EA  + ++M   G++P   T+  L++   K  +  E+    + ++ R   P  + + 
Sbjct: 292 KPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYG 351

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++      G   + + +L L + KG       ++ ++G YAK  ++ E L ++  M  +
Sbjct: 352 TLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQ 411

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH----LEKGN 353
            ++P +  Y +++  LC  G++++A   F  +KS  L P + ++ +L  IH     +K +
Sbjct: 412 GLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTL--IHGLCTCDKWD 469

Query: 354 KAKALHLCEEMVSEGL 369
           K + L    EM+  G+
Sbjct: 470 KVEELAF--EMIDRGI 483



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 163/352 (46%)

Query: 21  LSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           L ++++ T+I+ + +  + D  + ++  ML+    P+  T  ++ISAL K   +     +
Sbjct: 205 LDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQV 264

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
             R+      P  I+ TSL+       + +E + + K+M R  +  D + Y+ ++    K
Sbjct: 265 FTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCK 324

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A  +++ ++KRG   +S  Y T +  Y   G + E + L+  M   G++     
Sbjct: 325 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 384

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           FN+++   AK  +++E+L     M  + L P    +  ++  LC  G    A        
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G +PN + ++ LI G     +  +V +L +EM  + I      + +++ +LC+ G++ 
Sbjct: 445 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 504

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA   F +M    + P  + Y +L+  +   G   +A+ L   MV  G+KPS
Sbjct: 505 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPS 556



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 6/365 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  V   + + G     I + +L+H    S +      I++ M  +   P+  T   
Sbjct: 258 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 317

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LCK G+      + D +  +   P      +L+     E  + E   LL  M++K 
Sbjct: 318 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 377

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           M      +++I+ A  K   ++ AL+V+  M ++G + +   Y T +   C  G++++A 
Sbjct: 378 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 437

Query: 184 CLMQEMENAGLKPYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
                +++ GL P    F  LI G   C K  ++EE L++  +M+ R +      FN ++
Sbjct: 438 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEE-LAF--EMIDRGICLDTIFFNAIM 494

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G   +A  +  L +  G  PN  TY+ LI GY  +G++ E +KL   M +  + 
Sbjct: 495 GNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVK 554

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P+   Y ++I+   Q G++E+     + M    + PG+  YE L+    + G    A  L
Sbjct: 555 PSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614

Query: 361 CEEMV 365
              M+
Sbjct: 615 YLRMI 619



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 11/270 (4%)

Query: 115 LLKRMLRKNMIH---DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIG 171
           L  RM R        +   Y +++    ++  L+ A      ++  G   +  +++  + 
Sbjct: 83  LFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLK 142

Query: 172 AYCEYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
             C+  +  +A + +++ M   G KP   ++ +L++G    K  +++L     M   K  
Sbjct: 143 GLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK-- 200

Query: 231 PSCS----AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
             C     A+  +I  L   G   +A  +    LD+G SP+ +TYS +I   +K   + +
Sbjct: 201 GRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDK 260

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             +++  M    + P    YTSL+   C  GK +EA   FK M  H + P V  Y +L+ 
Sbjct: 261 ATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMD 320

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKP-STSY 375
              + G   +A  + + +V  G KP ST+Y
Sbjct: 321 YLCKNGKSTEARKIFDSLVKRGHKPDSTTY 350



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 4/152 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF++      RG  L  I FN ++  + K  R      ++  M+     PN  T  TL
Sbjct: 473 ELAFEMI----DRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTL 528

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C  G++   + +L  +      P  +   ++I    Q  RIE+G+ LL+ M  K +
Sbjct: 529 IDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGV 588

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
               + Y +++    +     +A  +Y  M+K
Sbjct: 589 NPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 176/391 (45%), Gaps = 35/391 (8%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +++  + + ++  + K  +  L   ++  ML++  + +E      I A C+   L   
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++ R+  +      +    L+  + +  R++E + +   M+   +  D + Y  +VY 
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 138 KVKMRNLESALVVYEEMLKRGFSA-----------------------------------N 162
             +M  LE AL +  +M++ GF                                     N
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
            F Y   I   C+  + ++A+ L +EM   GL+P + T+ +LI    K   IE++L   +
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M  + +  +   +N +I   C+ G+  +A G+L+  + +G +P   +YS LI G  + G
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           ++   ++L+ EM  + I+     +T+LI+  C+  K++EA + F  M   +++P    + 
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 540

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++  +   GN  KA  L ++MV  GLKP  
Sbjct: 541 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 571



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 173/371 (46%), Gaps = 3/371 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR+ E A +V   +   G +   +++ TL++   + +  ++  RI   M+     P+EA 
Sbjct: 270 MRVQE-AVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 328

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I  L K   ++    +  ++      P V    +LI ++ + ER ++   L K M 
Sbjct: 329 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 388

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y+++++A  K   +E AL ++++M  +G     + Y + I  YC+ G ++
Sbjct: 389 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 448

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+  M   GL P   +++ LI G  +   +   +    +M  R +  +   F  +I
Sbjct: 449 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 508

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+     +A  +    +D    PNE+T++ +I GY   G I++  +LY +M    + 
Sbjct: 509 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 568

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMK-SHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           P    Y SLIS LC    + +A+++   ++ S++++    +   L G   E G   +  H
Sbjct: 569 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE-GRFTETYH 627

Query: 360 LCEEMVSEGLK 370
           L +EM   G+K
Sbjct: 628 LWDEMAVRGVK 638



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 174/397 (43%), Gaps = 38/397 (9%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +RG + +  +F  LI+   K  + D   R++  M+++   PNE T   +I   C  
Sbjct: 490 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 549

Query: 72  GQLQTYVDMLDRIHGKRCSP-------------------------------MVIVN---- 96
           G ++    + D++      P                                 ++N    
Sbjct: 550 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 609

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           T+L+    +E R  E   L   M  + +  D +++++IVYA +K  + E + V++ EM +
Sbjct: 610 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 669

Query: 157 RGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           +G   +   YT  I A   E   I+  NC  Q M   G  P   T  +LI    K+  + 
Sbjct: 670 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQ-MVVDGYSPNTVTHTVLINNLCKSGYLG 728

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            +   C++M++  +LP+   +N  +      G+ ++A  + + A+ +G   + ++++ LI
Sbjct: 729 SAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHS-AMLQGHLASIVSFNILI 787

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  K G+IQE + L  ++     SP   +Y+++I  LC+ G + +A + +  M    L 
Sbjct: 788 KGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLK 847

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           P V  Y   +      G   KAL +   M+  G++P+
Sbjct: 848 PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 884



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 45/366 (12%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FN +I            +++Y  M+E    P+  T R+LIS LC    L + V   + 
Sbjct: 537 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC----LTSGVSKANE 592

Query: 84  IHGKRCSPMVIVN----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
                 +   ++N    T+L+    +E R  E   L   M  + +  D +++++IVYA +
Sbjct: 593 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 652

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYD 198
           K  + E + V++ EM ++G   +   YT  I A   E   I+  NC  Q M   G  P  
Sbjct: 653 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ-MVVDGYSPNT 711

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP--------------------------- 231
            T  +LI    K+  +  +   C++M++  +LP                           
Sbjct: 712 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 771

Query: 232 -------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                  S  +FN +I+ LC+ G  ++A  +++   + GFSP+ I+YS +I    K G+I
Sbjct: 772 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +  +L+ EM YK + P + AY   I      G+ ++A   +  M    + P  D Y +L
Sbjct: 832 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891

Query: 345 V-GIHL 349
           + GI L
Sbjct: 892 LSGISL 897



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G  +++  +N+LI+   K    D    +   M++    P  A+   LI+ LC+ G 
Sbjct: 422 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 481

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L + +++   +  +  +      T+LI    ++++++E   L  +M+  N+I + + +++
Sbjct: 482 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 541

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     + N+  A  +Y++M++ G   +++ Y + I   C    + +AN  + ++EN+ 
Sbjct: 542 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 601

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
               + +   L+ G  +  R  E+    ++M  R +     +F  ++    +  + +++ 
Sbjct: 602 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 661

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G  P++I Y+ +I   +KE  + + L  + +M     SP    +T LI++L
Sbjct: 662 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 721

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN--KAKALH 359
           C+ G L  A+   K M + +++P    Y   +     +G+  KAK LH
Sbjct: 722 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLH 769


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 156/339 (46%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF L++  FN L++   K        +++  + +    P   +  TLI+  CK G L   
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVG 294

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             +   +   R  P V   ++LI  + +E +++    L   M  + +I + + ++ +++ 
Sbjct: 295 FRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHG 354

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             +   ++     Y++ML +G   +  +Y T +  +C+ G +  A  ++  M   GL+P 
Sbjct: 355 HSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  LI+G  +   ++ +L   ++M    +      F+ +I  +C+ G    A   L 
Sbjct: 415 KVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALR 474

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             L  G  P+++TY+ ++  + K+G+ Q   KL  EM+     P +  Y  L++ LC+ G
Sbjct: 475 EMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLG 534

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           +++ AD     M +  +VP    Y +L+  H    N +K
Sbjct: 535 QMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/315 (21%), Positives = 152/315 (48%), Gaps = 3/315 (0%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            +V F +  ++E+      + +++ LI+ + K ++ D   R++  M E    PN+    T
Sbjct: 291 LDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTT 350

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI    + GQ+    +   ++  K   P +++  +L+    +   +     ++  M+R+ 
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           +  D + Y+ ++    +  ++++AL + +EM + G   +   ++  I   C+ G++ +A 
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAE 470

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
             ++EM  AG+KP D T+ ++++   K    +      ++M S   +P+   +N ++  L
Sbjct: 471 RALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGL 530

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G  K A+ +L   L+ G  P++ITY+ L+ G+ +        K Y +     I   L
Sbjct: 531 CKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANAS---KHYKQKPEIGIVADL 587

Query: 304 PAYTSLISSLCQCGK 318
            +Y SL++ L +  K
Sbjct: 588 ASYKSLVNELYRASK 602



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 137/281 (48%)

Query: 93  VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
           V V   L+ +  +E  I +   +   + ++++    ++++ ++    K+ NL+    +  
Sbjct: 240 VYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKH 299

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
            M K     + F Y+  I A C+  K++ A+ L  EM   GL P D  F  LI G ++  
Sbjct: 300 HMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNG 359

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           +I+      ++M+S+ L P    +N ++   C+ G+   A  ++   + +G  P+++TY+
Sbjct: 360 QIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYT 419

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
            LI G+ + G++   L++  EM+   I      +++LI  +C+ G++ +A++  + M   
Sbjct: 420 TLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRA 479

Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            + P    Y  ++    +KG+      L +EM S+G  P+ 
Sbjct: 480 GMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNV 520



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 149/361 (41%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R   +  F + +     L+  + K +    VW  Y  +L+     N      L++  CK 
Sbjct: 194 RLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKE 253

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G +     + D I  +   P V+   +LI    +   ++ G  L   M +     D   Y
Sbjct: 254 GNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTY 313

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           S ++ A  K   ++ A  ++ EM +RG   N  ++TT I  +   G+I+      Q+M +
Sbjct: 314 SALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLS 373

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL+P    +N L+ G  K   +  + +  + M+ R L P    +  +I   C  G+   
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDT 433

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +       G   + + +S LI G  KEG + +  +   EM    + P    YT ++ 
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMD 493

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           + C+ G  +   K  K M+S   +P V  Y  L+    + G    A  L + M++ G+ P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVP 553

Query: 372 S 372
            
Sbjct: 554 D 554


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 156/319 (48%), Gaps = 2/319 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R+++ R +S  + SFN +I  V +  +      + + M E    P+  T   L+  LC+ 
Sbjct: 240 RWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRT 299

Query: 72  GQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
            ++    ++L R+     C P V+  TS+I    +  ++E+ M +   M+   ++ +T+ 
Sbjct: 300 NEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVT 359

Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
           Y++++    K+ +L SA+ VY++M +     +   +++ I  YC  G++++A  +  +M 
Sbjct: 360 YNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMA 419

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK-LLPSCSAFNEMIRRLCECGNA 249
              ++P   TF+++I    K  R +E++    ++  R  + P    +N +I  LC+CG  
Sbjct: 420 QHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKV 479

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +AN +     +KG  P++ TY+ LI GY  +  I E +  ++EM     SP        
Sbjct: 480 DEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCF 539

Query: 310 ISSLCQCGKLEEADKYFKI 328
           IS L + G   E D   ++
Sbjct: 540 ISCLLKAGMPNEVDHVMRL 558



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 155/339 (45%), Gaps = 3/339 (0%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++N L+  +    R   V  +++  +++  Y P+  +   +I  +C+ GQ+Q  +++++R
Sbjct: 217 AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 276

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM-IHDTIAYSLIVYAKVKMR 142
           ++   CSP  + +  L+  + +   +  G  +L+R+ R  + + + + ++ ++    K  
Sbjct: 277 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 336

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
            LE A+ VY +M+  G   N+  Y   I  Y + G +  A  + Q+M      P   TF+
Sbjct: 337 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 396

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT-LALD 261
            LI+G  +  +++++L     M   ++ P+   F+ +I  LC+   + +A G+L  L L 
Sbjct: 397 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 456

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
              +P    Y+ +I    K G++ E   +   ME K   P    YT LI   C   ++ E
Sbjct: 457 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 516

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           A  +F  M      P        +   L+ G   +  H+
Sbjct: 517 AIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHV 555



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/322 (20%), Positives = 145/322 (45%), Gaps = 6/322 (1%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRC-SPMVIVNTSLILRIIQEERIEEGMV 114
           P+  + + +I  LC+ G+    + + D++      SP     + L+        ++    
Sbjct: 142 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 201

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK-RGFSANSFVYTTFIGAY 173
           LL +        +  AY+ ++ + +    +   + ++E  ++ R +S + + +   I   
Sbjct: 202 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 261

Query: 174 CEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL-LPS 232
           C  G++++A  L++ M   G  P   T N+L++G  +   +        ++    + +P+
Sbjct: 262 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 321

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              F  +I   C+ G  + A  +    +  G  PN +TY+ LI GY K G++   +++Y 
Sbjct: 322 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 381

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           +M      P +  ++SLI   C+CG+L++A + +  M  H + P V  +  ++    ++ 
Sbjct: 382 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 441

Query: 353 NKAKALHLCEEMVSEGLKPSTS 374
              +A+ L  E+    L+P  +
Sbjct: 442 RSDEAIGLLNEL---NLRPDIA 460



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 128/263 (48%), Gaps = 2/263 (0%)

Query: 9   DVCRYLEQRGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
           +V R L++ G  + ++++F ++I    K+ + +    +Y  M+ +   PN  T   LI+ 
Sbjct: 307 EVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLING 366

Query: 68  LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHD 127
             K G L + V++  ++   RC P V+  +SLI    +  ++++ + +   M +  +  +
Sbjct: 367 YGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPN 426

Query: 128 TIAYSLIVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
              +S+I+++  K    + A+ +  E+ L+   +  +F+Y   I   C+ GK++EAN + 
Sbjct: 427 VYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIR 486

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
           + ME  G +P   T+ +LI G     RI E++ +  +M+     P     N  I  L + 
Sbjct: 487 KGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKA 546

Query: 247 GNAKQANGMLTLALDKGFSPNEI 269
           G   + + ++ LA     S  E+
Sbjct: 547 GMPNEVDHVMRLASGGASSIQEV 569


>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
          Length = 838

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 182/389 (46%), Gaps = 22/389 (5%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           +VA ++   +   GFS+ L  ++ LI  +   +      ++++ M  +   P+   ++ +
Sbjct: 294 DVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITPDVRLLKKI 353

Query: 65  ISALCKGGQLQTYVDMLDR--IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
           I A C+ G   T    ++   +H K  S +++ N  ++  +I    +E    LL  M+R 
Sbjct: 354 IEAFCRQGDFSTVGPFINENAVHLKPGSAVLLYNV-ILDGLINHGEVEAAYQLLSSMVRG 412

Query: 123 NM---IHDTI----------------AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
           +      DT+                +++++V    K++ L+ AL + ++M+  G     
Sbjct: 413 DQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKL 472

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
            ++   I   C  GK++EA  +  +M++ GLKP + T+N L+ G  + K    +     +
Sbjct: 473 LMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLRE 532

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           M +    P      +M+++LC  G   +A   L   L+ GF P+ +TYS  + G  K G+
Sbjct: 533 MRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGD 592

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           I+  L L+ ++  K   P + A+  LI+   + GK +EA +  + M S  ++P V  Y  
Sbjct: 593 IENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNL 652

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           ++ I  + G+  KA+    +M+ E   P+
Sbjct: 653 MIDIWCKSGSIDKAITCVYKMIDEEKPPT 681



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 157/359 (43%), Gaps = 39/359 (10%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            ++A  + + +   G    L+ FN LI  +  S + D  + I+  M +    P+E T  +
Sbjct: 453 LDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNS 512

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  +C+        D+L  +      P +   T ++ ++    RI E            
Sbjct: 513 LLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITE------------ 560

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                                  AL   + ML+ GF  +   Y+  +   C+ G IE A 
Sbjct: 561 -----------------------ALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENAL 597

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  ++ +    P     N+LI G  KA + +E+    E+M+S+ +LPS   +N MI   
Sbjct: 598 GLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIW 657

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G+  +A   +   +D+   P  +TY+ L+ G    G   E + L+ +M  K  SP  
Sbjct: 658 CKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNG 717

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE--SLVGIHLEKGNKAKALHL 360
            AYT+L++ LC+CG++E A  Y++ MK+      +DI+   +L  + + +G  +K   L
Sbjct: 718 IAYTALVNGLCKCGRMETAVNYYEEMKTKGF--DLDIFSLLNLTNLLIAQGQASKGCEL 774



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 140/365 (38%), Gaps = 44/365 (12%)

Query: 7   AFDVCRYL-EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           A D  R+  EQ GF  S  S N +  ++    R  L  R+    L +        +  L+
Sbjct: 84  ALDFFRWAAEQPGFRHSCYSLNAMASLLPPHQRAHLD-RLATDALVSRCSMTPGALGFLL 142

Query: 66  SALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
             L   G   T   + D       C+P       L+  + +  R E+    L+ M+    
Sbjct: 143 RRLGAAGLPDTAARVFDAAKTTLSCAPNSYTYNCLLDALAKAGRAEDAEARLQEMVVTCG 202

Query: 125 IHDTIAYSL--IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
                 Y+L  ++         E A  V + M KR +  +  V T  I AY ++GK+E+A
Sbjct: 203 DESVDRYTLTSLLQCYCNAGRPEDASAVLQRMSKRAW-VDEHVLTMLIVAYSKWGKVEDA 261

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L+  ME   ++P ++T ++L+ G A+  R++ +++   +M S                
Sbjct: 262 VELLGRMEALDMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMASY--------------- 306

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
                               GFS +   YS LI G     E+ + +KL+ +M+   I+P 
Sbjct: 307 --------------------GFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITPD 346

Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG--VDIYESLVGIHLEKGNKAKALHL 360
           +     +I + C+ G       +      H L PG  V +Y  ++   +  G    A  L
Sbjct: 347 VRLLKKIIEAFCRQGDFSTVGPFINENAVH-LKPGSAVLLYNVILDGLINHGEVEAAYQL 405

Query: 361 CEEMV 365
              MV
Sbjct: 406 LSSMV 410



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 55/107 (51%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
           +++++ +L+  +  + R D    ++  M E    PN      L++ LCK G+++T V+  
Sbjct: 681 TVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETAVNYY 740

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           + +  K     +    +L   +I + +  +G  LLK +L+K+++H+ 
Sbjct: 741 EEMKTKGFDLDIFSLLNLTNLLIAQGQASKGCELLKVVLQKDVVHNN 787


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 170/373 (45%), Gaps = 8/373 (2%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A+ +   +  RG S  +++++++I  ++K+   D   +++  M++N   P+     +
Sbjct: 224 LDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTS 283

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+   C  G+ +  + +  ++      P V+  T+L+  + +  +  E   +   ++++ 
Sbjct: 284 LVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRG 343

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALV----VYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
              D+  Y  +++        E ALV    + + M+K+G      ++   +GAY ++ K+
Sbjct: 344 HKPDSTTYGTLLHGYAT----EGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 399

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           +EA  +   M   GL P    +  +++    A R++++LS    + S  L P+   F  +
Sbjct: 400 DEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTL 459

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC C    +   +    +D+G   + I ++ ++G   K+G + E   L+  M    I
Sbjct: 460 IHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGI 519

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P    Y +LI   C  GK++EA K   +M  + + P    Y +++  + + G     L 
Sbjct: 520 EPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLT 579

Query: 360 LCEEMVSEGLKPS 372
           L  EM  +G+ P 
Sbjct: 580 LLREMDGKGVNPG 592



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 163/352 (46%)

Query: 21  LSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDM 80
           L ++++ T+I+ + +  + D  + ++  ML+    P+  T  ++ISAL K   +     +
Sbjct: 206 LDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQV 265

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
             R+      P  I+ TSL+       + +E + + K+M R  +  D + Y+ ++    K
Sbjct: 266 FTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCK 325

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
                 A  +++ ++KRG   +S  Y T +  Y   G + E + L+  M   G++     
Sbjct: 326 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 385

Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
           FN+++   AK  +++E+L     M  + L P    +  ++  LC  G    A        
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445

Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
            +G +PN + ++ LI G     +  +V +L +EM  + I      + +++ +LC+ G++ 
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 505

Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           EA   F +M    + P  + Y +L+  +   G   +A+ L   MV  G+KPS
Sbjct: 506 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPS 557



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 6/365 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            + A  V   + + G     I + +L+H    S +      I++ M  +   P+  T   
Sbjct: 259 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 318

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LCK G+      + D +  +   P      +L+     E  + E   LL  M++K 
Sbjct: 319 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 378

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           M      +++I+ A  K   ++ AL+V+  M ++G + +   Y T +   C  G++++A 
Sbjct: 379 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 438

Query: 184 CLMQEMENAGLKPYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
                +++ GL P    F  LI G   C K  ++EE L++  +M+ R +      FN ++
Sbjct: 439 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEE-LAF--EMIDRGICLDTIFFNAIM 495

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G   +A  +  L +  G  PN  TY+ LI GY  +G++ E +KL   M +  + 
Sbjct: 496 GNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVK 555

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P+   Y ++I+   Q G++E+     + M    + PG+  YE L+    + G    A  L
Sbjct: 556 PSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615

Query: 361 CEEMV 365
              M+
Sbjct: 616 YLRMI 620



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 163/338 (48%), Gaps = 13/338 (3%)

Query: 38  RNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI--HGKRCSPMVIV 95
           R D+V R    M E    P+  +   L+  LC     Q  +D+L  +  H  RC   V+ 
Sbjct: 154 RMDIVLR---RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVA 210

Query: 96  NTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 155
            T++I  +++E ++++   L   ML +    D + YS I+ A  K + ++ A  V+  M+
Sbjct: 211 YTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV 270

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           K G   +  +YT+ +  YC  GK +EA  + ++M   G++P   T+  L++   K  +  
Sbjct: 271 KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST 330

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
           E+    + ++ R   P  + +  ++      G   + + +L L + KG       ++ ++
Sbjct: 331 EARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIM 390

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
           G YAK  ++ E L ++  M  + ++P +  Y +++  LC  G++++A   F  +KS  L 
Sbjct: 391 GAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLA 450

Query: 336 PGVDIYESLVGIH----LEKGNKAKALHLCEEMVSEGL 369
           P + ++ +L  IH     +K +K + L    EM+  G+
Sbjct: 451 PNIVVFTTL--IHGLCTCDKWDKVEELAF--EMIDRGI 484



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 7/204 (3%)

Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS-- 234
           G+    + +++ M   G KP   ++ +L++G    K  +++L     M   K    C   
Sbjct: 150 GRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK--GRCPLD 207

Query: 235 --AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
             A+  +I  L   G   +A  +    LD+G SP+ +TYS +I   +K   + +  +++ 
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 267

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
            M    + P    YTSL+   C  GK +EA   FK M  H + P V  Y +L+    + G
Sbjct: 268 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 327

Query: 353 NKAKALHLCEEMVSEGLKP-STSY 375
              +A  + + +V  G KP ST+Y
Sbjct: 328 KSTEARKIFDSLVKRGHKPDSTTY 351



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 4/152 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E+AF++      RG  L  I FN ++  + K  R      ++  M+     PN  T  TL
Sbjct: 474 ELAFEMI----DRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTL 529

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I   C  G++   + +L  +      P  +   ++I    Q  RIE+G+ LL+ M  K +
Sbjct: 530 IDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGV 589

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
               + Y +++    +     +A  +Y  M+K
Sbjct: 590 NPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/359 (21%), Positives = 164/359 (45%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +++ G+  +  ++  L+ +  +  + +   +I   M ++   P   T   +++A C+ G+
Sbjct: 256 MKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGR 315

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   V + + +  K C P V    +++       ++ + M LL +M    +  D + Y+L
Sbjct: 316 MSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNL 375

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++  +    ++ SA  +   M   G +A+ + Y   I A C+ GK++EA  L   +E  G
Sbjct: 376 LIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P   TFN +I G  KA + + + ++ E M+S    P    ++  I  LC+   +++  
Sbjct: 436 IRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGL 495

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             +   L K   P+ + Y+ +I     E       +++ +M  +  SP +  YT+ + + 
Sbjct: 496 FFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAY 555

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C  G+L+EA+     MK    +     Y +L+  H   G   +A+ + + M      P+
Sbjct: 556 CNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN 614



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 164/365 (44%), Gaps = 7/365 (1%)

Query: 12  RYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
           RYL    + G+     +FN+LI    ++ + ++   ++  M       +  +   LI   
Sbjct: 150 RYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGF 209

Query: 69  CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
           C+ G++   +++   +      P +  + +L+  +    R EEG+ +L++M        T
Sbjct: 210 CEAGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTT 265

Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
            AY+ +V    + +  E A  +  EM   G        T  + AYC  G++  A  + + 
Sbjct: 266 RAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFES 325

Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
           M   G +P   T+N +++G   A ++ ++++  +QM    + P    +N +IR  C  G+
Sbjct: 326 MRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385

Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
              A  +L L    G + ++ TY+ LI    K G++ E   L+  +EY+ I P    + +
Sbjct: 386 IGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNT 445

Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           +I+ LC+ GK + A  + + M S    P    Y   +    +     + L   +EM+ + 
Sbjct: 446 VINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKD 505

Query: 369 LKPST 373
           +KPST
Sbjct: 506 VKPST 510



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 155/369 (42%), Gaps = 4/369 (1%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            EVA D+   +  RGFS   +S+  LI    ++ R D    +++ M +    P+  T   
Sbjct: 180 LEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAA 235

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           L+  LC  G+ +  + ML ++      P      +L+    +E++ EE   +L  M    
Sbjct: 236 LVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSG 295

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
           ++   +  +++V A  +   +  A+ V+E M  +G   N + Y   +  +C  GK+ +A 
Sbjct: 296 LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAM 355

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L+ +M   G++P   T+NLLI G      I  +      M    L      +N +I  L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+ G   +A  +      +G  PN +T++ +I G  K G+          M     +P  
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDT 475

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             Y+  I +LC+    +E   +   M    + P    Y  ++     + N   A  +  +
Sbjct: 476 YTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQ 535

Query: 364 MVSEGLKPS 372
           MVS+G  P 
Sbjct: 536 MVSQGCSPD 544



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 142/345 (41%), Gaps = 40/345 (11%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           F +L+   ++     L+ R++ HM  +    P  AT   LI ALC+   L+         
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLR--------- 146

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
           H +R                           L  M+R     D   ++ ++    + + L
Sbjct: 147 HAQR--------------------------YLSLMVRSGWRPDAFTFNSLILGYCRTQQL 180

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           E A  ++ +M  RGFS ++  Y   I  +CE G+I+EA  L +EM     +P   T   L
Sbjct: 181 EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAAL 236

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           ++G   A R EE L   ++M      P+  A+  ++   C    A++A  +L    D G 
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
            P  +T + ++  Y +EG +   ++++  M +K   P +  Y +++   C  GK+ +A  
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356

Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
               M+   + P V  Y  L+      G+   A  L   M   GL
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGL 401



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 165/381 (43%), Gaps = 22/381 (5%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF + R +E  G +    ++N LI  + K+ + D    ++  +      PN  T  T+I+
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVIN 448

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+       L+ +     +P     +  I  + + +  +EG+  +  ML+K++  
Sbjct: 449 GLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKP 508

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
            T+ Y++++      RN   A  ++ +M+ +G S +   YTT + AYC  G+++EA  ++
Sbjct: 509 STVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVV 568

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM+          +N LI+G     + + +++  + M     +P+   F  ++R L + 
Sbjct: 569 TEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQR 628

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
             A+               P + T         K  E+ +V +L+  M+  S+  +   Y
Sbjct: 629 RLAEHV-------------PLKAT------SVWKTIELADVFELFELMKKNSVPSSARTY 669

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
            S++    +  +L+E      +MK  +L    DIY +LV    +    + A  L   M+ 
Sbjct: 670 LSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIG 729

Query: 367 EGLKPST---SYLCSASTCRG 384
            G  P+     YL S  T  G
Sbjct: 730 HGFLPNLIFYQYLLSGLTAEG 750



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 4/181 (2%)

Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
           +A   P   T+N LI    +   +  +  Y   M+     P    FN +I   C     +
Sbjct: 122 HAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLE 181

Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
            A+ +      +GFS + ++Y+ LI G+ + G I E L+L+ EM      P +  + +L+
Sbjct: 182 VAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALV 237

Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
             LC  G+ EE     + MK     P    Y +LV +   +    +A  +  EM   GL 
Sbjct: 238 KGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLM 297

Query: 371 P 371
           P
Sbjct: 298 P 298



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/383 (18%), Positives = 137/383 (35%), Gaps = 51/383 (13%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           LE RG   + ++FNT+I+ + K+ + D+     ++M+     P+  T    I  LCK   
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
            Q  +  +D +  K   P  +  T +I R+  E        +  +M+ +    D + Y+ 
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTT 550

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
            V A      L+ A  V  EM K     ++  Y T I  +   G+ + A  +++ M    
Sbjct: 551 SVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVA 610

Query: 194 LKPYDETFNL-------------------------------------------------- 203
             P   TF +                                                  
Sbjct: 611 SMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYL 670

Query: 204 -LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            ++EG ++ +R++E  S    M    L  +   +N ++   C+      A  +L   +  
Sbjct: 671 SILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGH 730

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           GF PN I Y +L+ G   EG+     +++    +K  +     +  +I    + G  +  
Sbjct: 731 GFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMC 790

Query: 323 DKYFKIMKSHSLVPGVDIYESLV 345
                +++     P  + Y  L 
Sbjct: 791 HDMISMLEQMKCKPSDETYAMLT 813



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 75/143 (52%), Gaps = 4/143 (2%)

Query: 231 PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL 290
           P+ + +N +IR LC   + + A   L+L +  G+ P+  T++ LI GY +  +++    L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 291 YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLE 350
           + +M ++  S    +Y +LI   C+ G+++EA + F+ M      P +  + +LV    +
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242

Query: 351 KGNKAKALHLCEEMVSEGLKPST 373
            G   + L + ++M   G +P+T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTT 265


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 168/344 (48%), Gaps = 4/344 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG   ++++FNTL+  + K+   +    +   M +    P+  T    I  LCK G++Q
Sbjct: 142 RRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQ 201

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             ++M + +  +  +P  +V T+LI    +E  +  G+ L   M  + +  D +AY+ +V
Sbjct: 202 DAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALV 261

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               ++R++++A  + EEM K G   +   YTT I   C+ G+++ A  + QEM + G+ 
Sbjct: 262 NGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVA 321

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
             D T+  LI G +KA R  ++     +MM   L P  + +  +I   C+ G+ K     
Sbjct: 322 LDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKH 381

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L    +KG +P  +TY+ ++ G+   G+++    L   M    + P    Y  L+   C+
Sbjct: 382 LKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCK 441

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            GK+ + +   ++  +  +V    +Y SL+   ++K   AK+ H
Sbjct: 442 HGKVRDTE---ELKSAKGMVSDFGVYTSLINEFVKK-KSAKSYH 481



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 158/357 (44%), Gaps = 3/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RG  + + +++ L++ +         +  Y H+L+    P       L+  + + G+L 
Sbjct: 75  RRGIRVPMPAWSDLMNRLPSVPE---AYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLA 131

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
           +  ++ D +  +   P V+   +L+  + +   +     L   M +  +  D   Y   +
Sbjct: 132 SARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFI 191

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   ++ A+ ++EEM +RG + N+ V TT I A+C+ G +     L  EM   G+K
Sbjct: 192 QGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVK 251

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
                +N L+ G  + + ++ +    E+M    L P    +  +I   C+ G    A  M
Sbjct: 252 ADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEM 311

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                D+G + +++TY+ LI G +K G   +  ++  EM    + P    YT +I + C+
Sbjct: 312 KQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCK 371

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G ++   K+ K M++    PG+  Y  ++      G    A  L   M++ G+ P+
Sbjct: 372 NGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPN 428



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 142/302 (47%), Gaps = 3/302 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + + G +  + ++   I  + K+ R      +++ M E    PN   + TLI A CK G 
Sbjct: 175 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 234

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   +++   +  +     ++   +L+    +   ++    +++ M +  +  D + Y+ 
Sbjct: 235 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 294

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K   L++A+ + +EM   G + +   YT  I    + G+  +A  ++ EM  AG
Sbjct: 295 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 354

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           L+P + T+ ++I+   K   ++    + ++M ++   P    +N ++   C  G  K A+
Sbjct: 355 LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNAD 414

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +L   L+ G  PN+ITY+ L+ G+ K G++++  +L      K +      YTSLI+  
Sbjct: 415 MLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELK---SAKGMVSDFGVYTSLINEF 471

Query: 314 CQ 315
            +
Sbjct: 472 VK 473



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 120/265 (45%), Gaps = 3/265 (1%)

Query: 105 QEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
            E  + +G  LL   LR+ +     A+S ++    ++ ++  A   Y  +L  G    + 
Sbjct: 59  DEGLLPDGCSLLLLALRRGIRVPMPAWSDLMN---RLPSVPEAYAFYLHLLDAGVPPEAR 115

Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
            +   +      GK+  A  +  EM   G++P   TFN L+ G  KA  +  + +    M
Sbjct: 116 QFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLM 175

Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
               + P    +   I+ LC+ G  + A  M     ++G +PN +  + LI  + KEG++
Sbjct: 176 AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDV 235

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
              L+L +EM  + +   L AY +L++  C+   ++ A+   + M+   L P    Y +L
Sbjct: 236 TAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTL 295

Query: 345 VGIHLEKGNKAKALHLCEEMVSEGL 369
           +    ++G    A+ + +EM  EG+
Sbjct: 296 IDGCCKEGELDTAMEMKQEMSDEGV 320



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 44/247 (17%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           +R  + A D+   + + G     +++ TLI    K    D    + Q M +     ++ T
Sbjct: 267 VRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVT 326

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LIS L K G                             R +  ERI      L  M+
Sbjct: 327 YTALISGLSKAG-----------------------------RSVDAERI------LCEMM 351

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  D   Y++++ A  K  ++++     +EM  +G +     Y   +  +C  G+++
Sbjct: 352 EAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMK 411

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS-----CSA 235
            A+ L+  M N G+ P D T+N+L++G  K  ++ ++    E++ S K + S      S 
Sbjct: 412 NADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDT----EELKSAKGMVSDFGVYTSL 467

Query: 236 FNEMIRR 242
            NE +++
Sbjct: 468 INEFVKK 474



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 55/119 (46%)

Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
           LD G  P    ++ L+    + G++     ++ EM  + + PT+  + +L+S +C+   L
Sbjct: 106 LDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDL 165

Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
             A+    +M    + P V  Y + +    + G    A+ + EEM   GL P+T  L +
Sbjct: 166 NNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 224


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 172/397 (43%), Gaps = 34/397 (8%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G + ++++F +LI  + + +  D   +I+  M++    P+      +I  LCK  +
Sbjct: 78  MKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 137

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L       +R+    C P  +  T L+  + +  + E+G  + + ML K    + + Y+ 
Sbjct: 138 LDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 197

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANS------------------------------ 163
           +V    K   ++ AL +   +   G S +                               
Sbjct: 198 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDV 257

Query: 164 ---FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
               VYT+FI   C+ GK++EA  +  +M  AG  P   ++N++I    K  R+ E+   
Sbjct: 258 QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKEL 317

Query: 221 CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG-FSPNEITYSHLIGGYA 279
            +Q M RK +P       ++  LC+    ++A  +L   L+ G  +P+ +TYS +I G  
Sbjct: 318 MDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLC 377

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           K   + +   +  +M      P +  YT++I + C+ G+L+EA + F+ M        V 
Sbjct: 378 KADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVV 437

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
            Y  L+  +       +A+ + EEM   G++P+   L
Sbjct: 438 AYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSL 474



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 166/362 (45%), Gaps = 2/362 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           GF  +  + N+L+ V      +   +R+++  L  +  P++ T  TLI   CK  Q+   
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V++L  +     +P ++   SLI ++ +    ++ + +  +M+   +  D   Y++++  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
             K+  L+ A   +E M++ G   +   YT  + +  +  K E+ + + +EM + G  P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             T+  ++ G  KA RI+++LS   ++      PS S ++ +I  LC+     +A  +  
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
           +A   G   + I Y+  I G  K G++ E   ++ +M     +P   +Y  +I SLC+  
Sbjct: 252 MA--AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
           ++ EA +          +PGV +   LV    +     +A  + E M+  G +  +    
Sbjct: 310 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTY 369

Query: 378 SA 379
           SA
Sbjct: 370 SA 371



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 165/358 (46%), Gaps = 3/358 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q G     +++  L+H + K+ + +   +I++ ML     P   T  T+++  CK G++ 
Sbjct: 150 QSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRID 209

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + ++ R+ G   SP   + ++LI  + + +R +E   L +  +    + D I Y+  +
Sbjct: 210 QALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFI 267

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K   L+ A  V+ +M++ G + +   Y   I + C+  ++ EA  LM +       
Sbjct: 268 SGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCM 327

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFNEMIRRLCECGNAKQANG 254
           P      +L++G  K++R+EE+    E+M+ +    PS   ++ +I  LC+      A  
Sbjct: 328 PGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYV 387

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
           +L      G  P+ +TY+ +I  + K G + E  +L+  M  +  +  + AY  LI   C
Sbjct: 388 VLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYC 447

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           +  K++EA    + M    + P V    ++V    ++    +A  L E+M  E L  S
Sbjct: 448 RAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLPDS 505



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 143/299 (47%), Gaps = 3/299 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A  + R L+  G S S   ++TLI  + K DR+D    +++    +++  +     + IS
Sbjct: 211 ALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQ--DVIVYTSFIS 268

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G+L     +  ++    C+P  +    +I  + ++ R+ E   L+ + + +  + 
Sbjct: 269 GLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMP 328

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV-YTTFIGAYCEYGKIEEANCL 185
                +++V    K R +E A V+ E ML+ G  A S V Y+  I   C+  ++++A  +
Sbjct: 329 GVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVV 388

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +Q+M  AG  P   T+  +I+   K  R++E+    ++M  R       A+N +IR  C 
Sbjct: 389 LQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCR 448

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
                +A  M+     +G  PN ++ S ++ G  KE  ++E   L  +M ++S+  + P
Sbjct: 449 AAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLPDSDP 507



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 155/324 (47%), Gaps = 4/324 (1%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G S  L+++ T+++   K+ R D    + + +    R P+ +   TLI  LCK  +   
Sbjct: 186 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE 245

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             ++ +   G      VIV TS I  + +  +++E   +  +M+      D ++Y++I+Y
Sbjct: 246 ARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIY 303

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLK 195
           +  K   +  A  + ++ ++R       V T  +   C+  ++EEA  +++ M E     
Sbjct: 304 SLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRA 363

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++ +I+G  KA R++++    ++M     +P    +  +I   C+ G   +A  +
Sbjct: 364 PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAREL 423

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
                ++G + + + Y+ LI GY +  ++ E + +  EM  + I P + + ++++  LC+
Sbjct: 424 FQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCK 483

Query: 316 CGKLEEADKYFKIMKSHSLVPGVD 339
             ++EEA    + M   SL P  D
Sbjct: 484 ESRVEEARLLMEKMNFESL-PDSD 506


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/370 (23%), Positives = 175/370 (47%), Gaps = 3/370 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + ++G    ++ +  LI  + K  +      +   M+     PN  T   LI+ +CK G 
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGS 270

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR-KNMIH-DTIAY 131
           ++  + +L ++  K  +P V+   +LI  +     ++E M LL+ M+R KN++  + + +
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++     +  +  A  V   M + G   N   Y   IG      K+ +A  LM EM +
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL+P   T+++LI+G  K  +++ +      M  R + P    +  ++  +CE G  ++
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    +D  F  + + YS +I G  K G+++   +L   +  + ++P    Y+ +I+
Sbjct: 451 ARNLFN-EMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
              + G +E A+   K M +   +P V +++SL+  +  KG   K L L  EM+++ +  
Sbjct: 510 MFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIAL 569

Query: 372 STSYLCSAST 381
            +  + + ST
Sbjct: 570 DSKIISTLST 579



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 152/316 (48%), Gaps = 5/316 (1%)

Query: 63  TLISALCKGGQLQTYVDMLDRIH---GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T+++ALC+ G       +L  +       C P  +  T L+  +  +   ++ + LL+ M
Sbjct: 82  TVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSM 141

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
               +  D + Y  ++        ++ A+ +  EM + G   N  VY++ +  YC+ G+ 
Sbjct: 142 RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRW 201

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           E+   +  EM   G++P    +  LI+   K  + +++    + M+ R L P+   +N +
Sbjct: 202 EDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVL 261

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS- 298
           I  +C+ G+ K+A G+L    +KG +P+ +TY+ LI G +   E+ E + L  EM     
Sbjct: 262 INCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKN 321

Query: 299 -ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
            + P +  + S+I  LC  G++ +A +   +M+    +  +  Y  L+G  L      KA
Sbjct: 322 IVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKA 381

Query: 358 LHLCEEMVSEGLKPST 373
           + L +EM S GL+P +
Sbjct: 382 MELMDEMTSLGLEPDS 397



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 5/310 (1%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHML--ENIRYPNEATIRTL 64
           A  V + + ++G +  ++++NTLI  ++     D    + + M+  +NI  PN  T  ++
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV 333

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I  LC  G+++    +   +    C   ++    LI  +++  ++ + M L+  M    +
Sbjct: 334 IQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             D+  YS+++    KM  ++ A  +   M  RG     F Y   + A CE G +E A  
Sbjct: 394 EPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARN 453

Query: 185 LMQEMENAGLKPYDE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
           L  EM+N    P D   ++ +I G  KA  ++ +    + ++   L P    ++ +I   
Sbjct: 454 LFNEMDNN--FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
            + G+ + ANG+L      GF P+   +  LI GY+ +GEI +VL+L  EM  K+I+   
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571

Query: 304 PAYTSLISSL 313
              ++L +SL
Sbjct: 572 KIISTLSTSL 581



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 169/374 (45%), Gaps = 3/374 (0%)

Query: 2   RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
           RL + A  + R +   G    ++++ TLI  +  +   D    +   M E+   PN    
Sbjct: 129 RLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY 188

Query: 62  RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
            +L+   CK G+ +    +   +  K   P V++ T LI  + +  + ++   ++  M+R
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
           + +  + + Y++++    K  +++ A+ V ++M ++G + +   Y T I    +  +++E
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 182 ANCLMQEMENAG--LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
           A  L++EM      +KP   TFN +I+G     R+ ++      M     + +   +N +
Sbjct: 309 AMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  L      ++A  ++      G  P+  TYS LI G+ K  ++     L   M  + I
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
            P L  Y  L+ ++C+ G +E A   F  M ++  +  V  Y +++    + G+   A  
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGACKAGDLKTAKE 487

Query: 360 LCEEMVSEGLKPST 373
           L + +V EGL P  
Sbjct: 488 LLKSIVDEGLTPDA 501



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 165/381 (43%), Gaps = 40/381 (10%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRY--PNEATIRTLISALCKGGQLQTYVDM 80
           +S+NT++  + +   +D    + + M LE      PN  +   L+ ALC        V +
Sbjct: 78  VSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGL 137

Query: 81  LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
           L  +        V+   +LI  +     +++ + L+  M    +  + + YS ++    K
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197

Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
               E    V+ EM ++G   +  +YT  I + C+ GK ++A+ +M  M   GL+P   T
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257

Query: 201 FNL-----------------------------------LIEGCAKAKRIEESLSYCEQMM 225
           +N+                                   LI+G +    ++E++   E+M+
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 226 SRK--LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
             K  + P+   FN +I+ LC+ G  +QA  +  +  + G   N +TY+ LIGG  +  +
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           +++ ++L  EM    + P    Y+ LI   C+  +++ A+     M+   + P +  Y  
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 344 LVGIHLEKGNKAKALHLCEEM 364
           L+    E+G   +A +L  EM
Sbjct: 438 LLVAMCEQGMMERARNLFNEM 458


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 169/359 (47%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           ++  G   ++ + + LI+     +R    + +   +L+    P+ AT  TLI  +   G+
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   + + D++ G+   P V+   +LI  + +       + LL  M++KN   +  AY+ 
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           I+ +  K R +  A  ++ EM+ +G S + F Y + I A C   + +    L+ EM ++ 
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   +FN +++   K  ++ E+    ++M+ R + P+   +  ++   C      +A 
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +    + KG  PN I+Y+ LI GY K   I + + L+ EM  + + P    Y++LI  L
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           C   +L++A   F  M + S +P +  Y  L+    +    A+A+ L + +    L P 
Sbjct: 387 CHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/361 (21%), Positives = 173/361 (47%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           Q+    ++ ++NT+I  + K  +    + ++  M+     P+  T  +LI ALC   + +
Sbjct: 194 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 253

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
               +L+ +   +  P V+   +++  + +E ++ E   ++ +M+++ +  + + Y+ ++
Sbjct: 254 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                +  ++ A+ V++ M+ +G   N   Y T I  YC+  +I++A  L  EM    L 
Sbjct: 314 DGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI 373

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   T++ LI G    +R++++++   +M++   +P+   +  ++  LC+     +A  +
Sbjct: 374 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 433

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L         P+    +  I G  + GE++    L+  +  K + P +  Y+ +I+ LC+
Sbjct: 434 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 493

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
            G L+EA K F+ M  +       IY ++    L     ++A+ L +EMV+ G     S 
Sbjct: 494 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 553

Query: 376 L 376
           +
Sbjct: 554 M 554



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 162/366 (44%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF V   + + G      +F TLI  +    +      ++  M+     P+  T  TLI+
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LCK G     + +L  +  K C P V    ++I  + ++ ++ E   L   M+ K +  
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISP 234

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           D   Y+ +++A   +   +    +  EM+      +   + T + A C+ GK+ EA+ ++
Sbjct: 235 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVV 294

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M   G++P   T+  L++G      ++E++   + M+ +  +P+  ++N +I   C+ 
Sbjct: 295 DKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
               +A  +      +   P+ +TYS LI G      +Q+ + L++EM   S  P L  Y
Sbjct: 355 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 414

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+  LC+   L EA    K ++  +L P + +    +      G    A  L   + S
Sbjct: 415 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474

Query: 367 EGLKPS 372
           +GL+P 
Sbjct: 475 KGLQPD 480



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 141/289 (48%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           AF++   +  +G S  + ++N+LIH +        V  +   M+++   P+  +  T++ 
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           ALCK G++    D++D++  +   P V+  T+L+        ++E + +   M+ K  + 
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMP 339

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
           + I+Y+ ++    K++ ++ A+ ++ EM ++    ++  Y+T I   C   ++++A  L 
Sbjct: 340 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 399

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            EM      P   T+ +L++   K + + E+++  + +    L P     N  I  +C  
Sbjct: 400 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 459

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           G  + A  + +    KG  P+  TYS +I G  + G + E  KL+ EM+
Sbjct: 460 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 508



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 143/328 (43%)

Query: 46  YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ 105
           +  ML     P+      L++++ K     T + +  ++      P +     LI     
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
             R+     +L ++L+     DT  ++ ++        +  AL ++++M+  GF  +   
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
           Y T I   C+ G    A  L+  M     +P    +N +I+   K +++ E+ +   +M+
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228

Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           ++ + P    +N +I  LC     K    +L   +D    P+ ++++ ++    KEG++ 
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E   +  +M  + + P +  YT+L+   C   +++EA K F  M     +P V  Y +L+
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPST 373
             + +     KA++L  EM  + L P T
Sbjct: 349 NGYCKIQRIDKAMYLFGEMCRQELIPDT 376



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 8/300 (2%)

Query: 22  SLISFNTLIHVVTK----SDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
            ++SFNT++  + K    ++ +D+V ++ Q  +E    PN  T   L+   C   ++   
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE----PNVVTYTALMDGHCLLSEMDEA 325

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V + D +  K C P VI   +LI    + +RI++ M L   M R+ +I DT+ YS +++ 
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              +  L+ A+ ++ EM+      N   Y   +   C+   + EA  L++ +E + L P 
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
            +  N+ I+G  +A  +E +      + S+ L P    ++ MI  LC  G   +A+ +  
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
              + G + N   Y+ +  G+ +  E    ++L  EM  +  S      T  +  L   G
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 10/214 (4%)

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
           F + S  + T  GA   + +       M  M+     P    FN L+   AK K     L
Sbjct: 32  FHSKSLHFNTIDGAISSFNR-------MLRMQPP---PSTVDFNKLLTSIAKMKHHSTLL 81

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
           S   QM S  + P+    + +I   C       A  +L   L  G  P+  T++ LI G 
Sbjct: 82  SLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGI 141

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
             EG+I E L L+ +M  +   P +  Y +LI+ LC+ G    A +    M   +  P V
Sbjct: 142 YVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 201

Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
             Y +++    +     +A +L  EMV++G+ P 
Sbjct: 202 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 235



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 99/231 (42%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   ++IS+NTLI+   K  R D    ++  M      P+  T  TLI  LC   +LQ 
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 394

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
            + +   +      P ++    L+  + +   + E M LLK +   N+  D    ++ + 
Sbjct: 395 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 454

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +   LE+A  ++  +  +G   + + Y+  I   C  G ++EA+ L +EM+  G   
Sbjct: 455 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 514

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
               +N +  G  +      ++   ++M++R      S     ++ L + G
Sbjct: 515 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 162/357 (45%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           +  E  G +  L + N L++           + +  ++L+   +PN  T+ TLI  LC  
Sbjct: 87  KKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFR 146

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G+++  +   D++  +      +   +LI  + +    +    LL+++   ++  D + Y
Sbjct: 147 GEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMY 206

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + I+++  K + L  A  +Y EM+ +G S N   Y   +  +C  G ++EA  L+ EM+ 
Sbjct: 207 NTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKL 266

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   TFN LI+   K  +++ +      MM   + P    +N +I         K 
Sbjct: 267 KNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKN 326

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +       G +PN  TY+ +I G  KE  + E + L+ EM+YK++ P +  YTSLI 
Sbjct: 327 AKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLID 386

Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
            LC+   LE A    K MK   + P V  Y  L+    + G    A    + ++ +G
Sbjct: 387 GLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 163/354 (46%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +GF L+ +S+ TLI+ + K+     V R+ + +  +   P+     T+I +LCK   L  
Sbjct: 162 QGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGD 221

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             D+   +  K  SP V+   +L+        ++E   LL  M  KN+  D   ++ ++ 
Sbjct: 222 ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID 281

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
           A  K   +++A +V   M+K     +   Y + I  Y    K++ A  +   M  +G+ P
Sbjct: 282 ALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTP 341

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+  +I+G  K K ++E++S  E+M  + ++P    +  +I  LC+  + ++A  + 
Sbjct: 342 NVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALC 401

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
               ++G  P+  +Y+ L+    K G ++   + +  +  K     +  Y  +I+ LC+ 
Sbjct: 402 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKA 461

Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
               EA      M+    +P    +++++    EK    KA  +  EM++ GL+
Sbjct: 462 DLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 168/366 (45%), Gaps = 12/366 (3%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  +C+ ++++G    + S+  L+  + K  R +     +Q +L    + N  T   
Sbjct: 394 LERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNV 453

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LCK       +D+  ++ GK C P  I   ++I  + +++  ++   +L+ M    
Sbjct: 454 MINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREM---- 509

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
                IA  L    KV+   L+ A +V   M K     +   Y T +  Y    +++ A 
Sbjct: 510 -----IARGLQEARKVR---LKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAK 561

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            +   M   G+ P  + + ++I+G  K K ++E++S  E+M  + + P+   +  +I  L
Sbjct: 562 YVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDAL 621

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
           C+  + ++A  +L    + G  P+  +Y+ L+ G  K G ++   +++  +  K     +
Sbjct: 622 CKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNV 681

Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
             YT++I+ LC+ G  +EA      M+    +P    ++ ++    EK    KA  +  E
Sbjct: 682 QVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXE 741

Query: 364 MVSEGL 369
           M++ GL
Sbjct: 742 MIARGL 747



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 152/323 (47%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R LE       ++ +NT+IH + K+        +Y  M+     PN  T   L+   C  
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIM 251

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G L+    +L+ +  K  +P V    +LI  + +E +++   ++L  M++  +  D + Y
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTY 311

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++     +  +++A  V+  M + G + N   YTT I   C+   ++EA  L +EM+ 
Sbjct: 312 NSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
             + P   T+  LI+G  K   +E +++ C++M  + + P   ++  ++  LC+ G  + 
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A       L KG+  N  TY+ +I G  K     E + L  +ME K   P    + ++I 
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491

Query: 312 SLCQCGKLEEADKYFKIMKSHSL 334
           +L +  + ++A+K  + M +  L
Sbjct: 492 ALFEKDENDKAEKILREMIARGL 514



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/361 (21%), Positives = 164/361 (45%), Gaps = 2/361 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
           FN ++  +  +     V  +++    N   P+  T+  L++  C    +     +L  I 
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125

Query: 86  GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
            +   P  I   +LI  +     I++ +    +++ +    + ++Y  ++    K    +
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185

Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
           +   +  ++       +  +Y T I + C+   + +A  L  EM   G+ P   T+N L+
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245

Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
            G      ++E+ S   +M  + + P    FN +I  L + G  K A  +L + +     
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305

Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
           P+ +TY+ LI GY    +++    ++Y M    ++P +  YT++I  LC+   ++EA   
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365

Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SY-LCSASTCR 383
           F+ MK  +++P +  Y SL+    +  +  +A+ LC++M  +G++P   SY +   + C+
Sbjct: 366 FEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCK 425

Query: 384 G 384
           G
Sbjct: 426 G 426



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 125/296 (42%)

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
           V   DR+   R  P       ++  ++  +     + L K+        D    ++++  
Sbjct: 48  VASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNC 107

Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
              + ++  A  V   +LKRG+  N+    T I   C  G+I++A     ++   G +  
Sbjct: 108 FCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLN 167

Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
             ++  LI G  K    +       ++    + P    +N +I  LC+      A  + +
Sbjct: 168 QVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYS 227

Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
             + KG SPN +TY+ L+ G+   G ++E   L  EM+ K+I+P +  + +LI +L + G
Sbjct: 228 EMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEG 287

Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           K++ A     +M    + P V  Y SL+  +        A ++   M   G+ P+ 
Sbjct: 288 KMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNV 343



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/124 (19%), Positives = 57/124 (45%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
            E A  + + +++ G    + S+  L+  + KS R +    I+Q +L    + N      
Sbjct: 627 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTA 686

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           +I+ LCK G     +D+  ++  K C P  +    +I  + +++  ++   +L  M+ + 
Sbjct: 687 MINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746

Query: 124 MIHD 127
           ++ +
Sbjct: 747 LMKE 750


>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rubella]
          Length = 394

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 134/265 (50%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           L+ R  +E  I     +   + +  +    ++Y+ ++   +++ +L+    +   M   G
Sbjct: 130 LMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASG 189

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
              + + Y+  I   C+  K+++AN L  EM   GL P   TF  LI+G  K  R++ +L
Sbjct: 190 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAL 249

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
              +QM+S+ LLP    +N +I  LC+ G+ KQA+ ++     KG  P++ITY+ LI G 
Sbjct: 250 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGC 309

Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            KEG++    +    M  ++I     AYT+LIS LCQ G+  +A+K  + M S  L P  
Sbjct: 310 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDA 369

Query: 339 DIYESLVGIHLEKGNKAKALHLCEE 363
             Y  ++    +KG+  K   L +E
Sbjct: 370 RTYTMIINEFCKKGDVWKGSKLLKE 394



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 141/293 (48%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           ++ F++ +   + + + G+  SL  FN L+H   K     +   ++  + +    P+  +
Sbjct: 102 LKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVS 161

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TL++   + G L     +   +H     P V   + LI  + +E ++++   L   ML
Sbjct: 162 YNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 221

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            K ++ + + ++ ++    K   ++ AL +Y++ML +    +   Y T I   C+ G ++
Sbjct: 222 VKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 281

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           +A+ L+ EM   GLKP   T+  LI+GC K   ++ +  + ++M+   +     A+  +I
Sbjct: 282 QAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 341

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             LC+ G +  A  ML   L  G  P+  TY+ +I  + K+G++ +  KL  E
Sbjct: 342 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 110/232 (47%)

Query: 139 VKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYD 198
           +K++  +     Y+E+L+ G+ A+ + +   +  +C+   I  A  +   +   GL+P  
Sbjct: 100 MKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSV 159

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
            ++N L+ G  +   ++E       M +  + P    ++ +I  LC+      AN +   
Sbjct: 160 VSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 219

Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
            L KG  PN +T++ LI G+ K G +   L++Y +M  +S+ P L  Y +LI  LC+ G 
Sbjct: 220 MLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 279

Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
           L++A      M    L P    Y +L+    ++G+   A    + M+ E ++
Sbjct: 280 LKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIR 331



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLKRGFSANS--FVYTTFIGAYC 174
            MIH    + ++  AK      V  +   SA  V+  +L+   +  S  +V++  I AY 
Sbjct: 6   TMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGLITAYL 65

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     E+    P+D T   ++E   K K  +    + ++++      S 
Sbjct: 66  ESGFLRDAIECYRLTREHKFWVPFD-TCRKVLEHLMKLKYFKLVWGFYKEILESGYPASL 124

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN ++ R C+  + + A  +       G  P+ ++Y+ L+ GY + G++ E  +L   
Sbjct: 125 YFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 184

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M    + P +  Y+ LI+ LC+  K+++A++ F  M    LVP    + +L+  H + G 
Sbjct: 185 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 244

Query: 354 KAKALHLCEEMVSEGLKPS 372
              AL + ++M+S+ L P 
Sbjct: 245 VDLALEIYKQMLSQSLLPD 263


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 176/391 (45%), Gaps = 35/391 (8%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +++  + + ++  + K  +  L   ++  ML++  + +E      I A C+   L   
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++ R+  +      +    L+  + +  R++E + +   M+   +  D + Y  +VY 
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 138 KVKMRNLESALVVYEEMLKRGFSA-----------------------------------N 162
             +M  LE AL +  +M++ GF                                     N
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
            F Y   I   C+  + ++A+ L +EM   GL+P + T+ +LI    K   IE++L   +
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M  + +  +   +N +I   C+ G+  +A G+L+  + +G +P   +YS LI G  + G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           ++   ++L+ EM  + I+     +T+LI+  C+  K++EA + F  M   +++P    + 
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++  +   GN  KA  L ++MV  GLKP  
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 173/371 (46%), Gaps = 3/371 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR+ E A +V   +   G +   +++ TL++   + +  ++  RI   M+     P+EA 
Sbjct: 247 MRVQE-AVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I  L K   ++    +  ++      P V    +LI ++ + ER ++   L K M 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y+++++A  K   +E AL ++++M  +G     + Y + I  YC+ G ++
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+  M   GL P   +++ LI G  +   +   +    +M  R +  +   F  +I
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 485

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+     +A  +    +D    PNE+T++ +I GY   G I++  +LY +M    + 
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMK-SHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           P    Y SLIS LC    + +A+++   ++ S++++    +   L G   E G   +  H
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE-GRFTETYH 604

Query: 360 LCEEMVSEGLK 370
           L +EM   G+K
Sbjct: 605 LWDEMAVRGVK 615



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 174/397 (43%), Gaps = 38/397 (9%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +RG + +  +F  LI+   K  + D   R++  M+++   PNE T   +I   C  
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526

Query: 72  GQLQTYVDMLDRIHGKRCSP-------------------------------MVIVN---- 96
           G ++    + D++      P                                 ++N    
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 586

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           T+L+    +E R  E   L   M  + +  D +++++IVYA +K  + E + V++ EM +
Sbjct: 587 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 157 RGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           +G   +   YT  I A   E   I+  NC  Q M   G  P   T  +LI    K+  + 
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQ-MVVDGYSPNTVTHTVLINNLCKSGYLG 705

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            +   C++M++  +LP+   +N  +      G+ ++A  + + A+ +G   + ++++ LI
Sbjct: 706 SAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHS-AMLQGHLASIVSFNILI 764

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  K G+IQE + L  ++     SP   +Y+++I  LC+ G + +A + +  M    L 
Sbjct: 765 KGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLK 824

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           P V  Y   +      G   KAL +   M+  G++P+
Sbjct: 825 PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 45/366 (12%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FN +I            +++Y  M+E    P+  T R+LIS LC    L + V   + 
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC----LTSGVSKANE 569

Query: 84  IHGKRCSPMVIVN----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
                 +   ++N    T+L+    +E R  E   L   M  + +  D +++++IVYA +
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYD 198
           K  + E + V++ EM ++G   +   YT  I A   E   I+  NC  Q M   G  P  
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ-MVVDGYSPNT 688

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP--------------------------- 231
            T  +LI    K+  +  +   C++M++  +LP                           
Sbjct: 689 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748

Query: 232 -------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                  S  +FN +I+ LC+ G  ++A  +++   + GFSP+ I+YS +I    K G+I
Sbjct: 749 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +  +L+ EM YK + P + AY   I      G+ ++A   +  M    + P  D Y +L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 345 V-GIHL 349
           + GI L
Sbjct: 869 LSGISL 874



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G  +++  +N+LI+   K    D    +   M++    P  A+   LI+ LC+ G 
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L + +++   +  +  +      T+LI    ++++++E   L  +M+  N+I + + +++
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     + N+  A  +Y++M++ G   +++ Y + I   C    + +AN  + ++EN+ 
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
               + +   L+ G  +  R  E+    ++M  R +     +F  ++    +  + +++ 
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G  P++I Y+ +I   +KE  + + L  + +M     SP    +T LI++L
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 698

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN--KAKALH 359
           C+ G L  A+   K M + +++P    Y   +     +G+  KAK LH
Sbjct: 699 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLH 746


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 161/367 (43%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ V   + Q G   + +S+  LIH   +  + D    ++  M E+  +P+  T   L++
Sbjct: 244 AYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVA 303

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
           A C+ G+    +   + +      P V   T LI    +  +++EGM +L  ML K ++ 
Sbjct: 304 AFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVS 363

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
             + ++ ++    K   +E A+ V + M       NS  Y   I  +C    ++ A  L+
Sbjct: 364 SVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALL 423

Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
            +M    L P   T+N LI G  KA+ ++ +      M+    +P    F   I  LC+ 
Sbjct: 424 NKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKM 483

Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
           G  +QA+ +     +K    NE  Y+ LI GY K  +  +   L+  M ++   P    +
Sbjct: 484 GKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITF 543

Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
             L+  L + GK+E+A     +M      P V  Y  L+   L + +  +A    ++M+S
Sbjct: 544 NVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMIS 603

Query: 367 EGLKPST 373
            G +P+ 
Sbjct: 604 SGCQPNV 610



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 177/399 (44%), Gaps = 35/399 (8%)

Query: 10  VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
           V   L    FSLS+ S+N L  V+++    D +  +++ ML +   PN  +  T+++A C
Sbjct: 142 VLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHC 201

Query: 70  KGGQLQ-------------------TYVDMLD---RIH-------------GKRCSPMVI 94
           K G +                    TY  ++    +IH              + C    +
Sbjct: 202 KIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEV 261

Query: 95  VNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM 154
             T+LI    +  +I+E + L  +M       D   Y+++V A  ++     AL  +EEM
Sbjct: 262 SYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEM 321

Query: 155 LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRI 214
           ++ G   N + YT  I  +C+ GK++E   ++  M   GL      FN LI+G  K   +
Sbjct: 322 VENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMM 381

Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
           E+++   + M   K+ P+   +NE+I   C   +  +A  +L    +   SPN +TY+ L
Sbjct: 382 EDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTL 441

Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
           I G  K   +    +L++ M      P    + + I  LC+ GK+E+A + F+ +K    
Sbjct: 442 IHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA 501

Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
                +Y +L+  + +    + A  L + M+ EG  P++
Sbjct: 502 EANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNS 540



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 141/307 (45%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           ++G   S++ FN LI    K    +    +   M  N   PN  T   LI   C+   + 
Sbjct: 358 EKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMD 417

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +L++++  + SP ++   +LI  + +   ++    L   M++   + D   +   +
Sbjct: 418 RAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFI 477

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               KM  +E A  V+E + ++   AN F+YT  I  YC+  K  +A+ L + M   G  
Sbjct: 478 DCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCF 537

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P   TFN+L++G  K  ++E+++S  + M      P+   +  +I  +    +  +AN  
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           L   +  G  PN +TY+  I  Y ++G + E  ++  +++ + I      Y  L+++   
Sbjct: 598 LDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGC 657

Query: 316 CGKLEEA 322
            G+L+ A
Sbjct: 658 IGQLDSA 664



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/360 (21%), Positives = 160/360 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           L + GF     ++ +LI    K       +++++ M +     NE +   LI   C+ G+
Sbjct: 216 LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +   +++  ++    C P V   T L+    +  +  E +   + M+   +  +   Y++
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++    K+  ++  + +   ML++G  ++   +   I  YC+ G +E+A C++  M+   
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           + P   T+N LI G  + K ++ +++   +M   KL P+   +N +I  LC+      A 
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +  L +  GF P++ T+   I    K G++++  +++  ++ K        YT+LI   
Sbjct: 456 RLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGY 515

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+  K  +A   FK M      P    +  L+    ++G    A+ L + M     KP+ 
Sbjct: 516 CKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTV 575



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/357 (21%), Positives = 156/357 (43%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           + G   ++ ++  LI    K  + D    +   MLE     +      LI   CK G ++
Sbjct: 323 ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMME 382

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             + +LD +   +  P       LI    +++ ++  M LL +M    +  + + Y+ ++
Sbjct: 383 DAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
           +   K R ++SA  ++  M+K GF  +   +  FI   C+ GK+E+A+ + + ++    +
Sbjct: 443 HGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAE 502

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
             +  +  LI+G  KA++  ++    ++M+     P+   FN ++  L + G  + A  +
Sbjct: 503 ANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSL 562

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           + +       P   TY+ LI    +E +         +M      P +  YT+ I + C+
Sbjct: 563 VDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCR 622

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            G+L EA++    +K   ++    IY+ LV  +   G    A  +   M   G +PS
Sbjct: 623 QGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPS 679



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 17/270 (6%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK-----------------RGFSANS 163
           +   IH   +Y  +++  V+   L +A  V   M+K                   FS + 
Sbjct: 96  QHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSV 155

Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
             Y         +G I+E NCL ++M N G++P   +FN ++    K   +  + +Y   
Sbjct: 156 TSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCG 215

Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
           +M          +  +I   C+      A  +  +   +G   NE++Y++LI G+ + G+
Sbjct: 216 LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275

Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
           I E L+L+++M+     P +P YT L+++ C+ GK  EA K+F+ M  + + P V  Y  
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           L+    + G   + + +   M+ +GL  S 
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSV 365



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 167/364 (45%), Gaps = 9/364 (2%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A  V   L+++    +   +  LI    K+++      +++ ML    +PN  T   L
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVL 546

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           +  L K G+++  + ++D +      P V   T LI  I++E   +   + L +M+    
Sbjct: 547 LDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGC 606

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             + + Y+  + A  +   L  A  +  ++ + G   +SF+Y   + AY   G+++ A  
Sbjct: 607 QPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFG 666

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++  M + G +P  +T+++L++     K  +E +     + S  +    S  N  I ++ 
Sbjct: 667 VLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL--DLNSTNI----SVDNANIWKI- 719

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              + +    +    +++G  PN  TYS LI G  K   +    +L+  M+   ISP+  
Sbjct: 720 --ADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSEN 777

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
            + SL+SS C+ G  EEA +    M  ++ +  ++ Y+ LV    E+GN+ KA  +   +
Sbjct: 778 IHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSL 837

Query: 365 VSEG 368
           +S G
Sbjct: 838 LSCG 841



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 111/261 (42%), Gaps = 5/261 (1%)

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALV-----VYEEMLKRGFSANSFVYTTFIGA 172
           R +   + H   + S+  Y ++ M      L+     ++++ML  G   N   + T + A
Sbjct: 140 RFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNA 199

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
           +C+ G +  A      +   G      T+  LI G  K   + ++    E M     L +
Sbjct: 200 HCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRN 259

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
             ++  +I   CE G   +A  +     + G  P+  TY+ L+  + + G+  E LK + 
Sbjct: 260 EVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
           EM    I P +  YT LI   C+ GK++E  +    M    LV  V  + +L+  + ++G
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRG 379

Query: 353 NKAKALHLCEEMVSEGLKPST 373
               A+ + + M    + P++
Sbjct: 380 MMEDAICVLDSMKLNKVCPNS 400



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 9/233 (3%)

Query: 63  TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
            L++A    GQL +   +L R+    C P     + L+  +I E+  +EGM L       
Sbjct: 650 VLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNI 709

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
           ++ +  I          K+ + E   +++E+M+++G   N   Y+  I   C+   +  A
Sbjct: 710 SVDNANIW---------KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLA 760

Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
             L   M+ +G+ P +   N L+  C K    EE+L   + MM    L    ++  ++  
Sbjct: 761 FRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCG 820

Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           L E GN ++A  +    L  G++ +E+ +  L+ G  ++G + E  +L   ME
Sbjct: 821 LFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIME 873



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 73/165 (44%)

Query: 40  DLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           +++  +++ M+E    PN  T   LI  LCK   L     + + +     SP   ++ SL
Sbjct: 723 EIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSL 782

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
           +    +    EE + LL  M+  N +    +Y L+V    +  N E A  ++  +L  G+
Sbjct: 783 LSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGY 842

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + +  V+   +      G ++E + L   ME  G + + +T  +L
Sbjct: 843 NYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 180/388 (46%), Gaps = 11/388 (2%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M +FE    +   ++ RG S+++  +N +I    K   +       + M EN   P+  T
Sbjct: 291 MGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVT 350

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI+  C  G+++    +L++   +  +P  +  T L+    ++    +    L  M 
Sbjct: 351 YNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMS 410

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              +  D I+Y  +++  V    +++AL + + M+ RG   ++ +Y   +    + GK+ 
Sbjct: 411 TSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLS 470

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  ++ EM +  + P    +  L++G  +   ++E+    + ++ + L P    +N MI
Sbjct: 471 MAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMI 530

Query: 241 RRLCECGNAKQANGMLTLALDK----GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
           +   + G    A     L +DK       P+  T+S +I GY K+  +  VLK++  M  
Sbjct: 531 KGFSKSGMMDNA----ILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVK 586

Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
           ++  P +  YTSLI+  C+ G+ + A+K F +M+SH L P V  Y  L+G   ++    K
Sbjct: 587 QNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGK 646

Query: 357 ALHLCEEMVSEGLKPSTS---YLCSAST 381
           A+   E M+     P+ +   YL +  T
Sbjct: 647 AVSYFELMLINKCTPNDAAFHYLVNGFT 674



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 169/396 (42%), Gaps = 45/396 (11%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G   +++ +NTLI    K    +  +++++ +      P   T  +L++  CK G  + 
Sbjct: 237 KGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEA 296

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL-----LKRMLRKNMIHDTIAY 131
              +L  +  +  S    VN  +   II + R + G  +     LK M       D + Y
Sbjct: 297 IDLLLLEMKDRGLS----VNVQMYNNII-DARYKLGFDIKAKDTLKEMSENCCEPDLVTY 351

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           + ++        +E A  + E+ ++RG + N   YT  +  YC+ G+  +A   + EM  
Sbjct: 352 NTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMST 411

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
           +GL+    ++  LI G   A  ++ +L+  ++MM+R +LP  + +N ++  L + G    
Sbjct: 412 SGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSM 471

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  MLT  LD+  +P+   Y+ L+ G+ + G + E  KL+  +  K + P +  Y  +I 
Sbjct: 472 AKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIK 531

Query: 312 SLCQCGKLEEA-----------------------DKY------------FKIMKSHSLVP 336
              + G ++ A                       D Y            F +M   +  P
Sbjct: 532 GFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKP 591

Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            V  Y SL+  +  KG    A  L   M S GLKPS
Sbjct: 592 NVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPS 627



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 4/350 (1%)

Query: 27  NTLIHVVTKSDRNDLVWRIYQHMLENIRYPN----EATIRTLISALCKGGQLQTYVDMLD 82
           N+L++++ K  R +   ++Y  M++     +      T   ++  LC  G+++  + +++
Sbjct: 173 NSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIE 232

Query: 83  RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
              GK C P ++   +LI    ++  +E    L K++  K  I     +  +V    KM 
Sbjct: 233 SRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMG 292

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
             E+  ++  EM  RG S N  +Y   I A  + G   +A   ++EM     +P   T+N
Sbjct: 293 MFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYN 352

Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
            LI        +EE+    EQ + R L P+   +  ++   C+ G   +A   L      
Sbjct: 353 TLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTS 412

Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
           G   + I+Y  LI G    GE+   L +   M  + I P    Y  L++ L + GKL  A
Sbjct: 413 GLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMA 472

Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
                 M   ++ P   +Y +LV   +  GN  +A  L + ++ +GL P 
Sbjct: 473 KVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPG 522



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 130/322 (40%), Gaps = 39/322 (12%)

Query: 91  PMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN----MIHDTIAYSLIVYAKVKMRNLES 146
           P      SL+  +++  RIE    L   M+ ++    +  D    S++V        +E 
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIED 226

Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
            + + E    +G   N   Y T I  YC+ G++E A  L ++++  G  P  +TF  L+ 
Sbjct: 227 GIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVN 286

Query: 207 GCAKAKRIE-----------ESLSYCEQMMSRKLL------------------------P 231
           G  K    E             LS   QM +  +                         P
Sbjct: 287 GFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP 346

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
               +N +I   C  G  ++A  +L   + +G +PN++TY+ L+ GY K+GE  +     
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYL 406

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            EM    +   + +Y +LI  L   G+++ A      M +  ++P  +IY  L+    +K
Sbjct: 407 IEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKK 466

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           G  + A  +  EM+ + + P  
Sbjct: 467 GKLSMAKVMLTEMLDQNIAPDA 488


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 170/367 (46%), Gaps = 1/367 (0%)

Query: 7   AFDVCRYLEQRGFSLSLISF-NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           A D+C  L ++  SL  ++  N L+ ++ +  R D   ++Y  ML      +  +   L+
Sbjct: 152 ATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLV 211

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
             LC  G+++  + +++   G  C P V+    LI    +   +  G++LL  M  K  +
Sbjct: 212 RGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFL 271

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + Y  ++    K  +LE    ++ EM KRG S N  +Y + I A C+     +A  +
Sbjct: 272 PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVI 331

Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
           +++M  +G  P   TFN LI G      + ++  +  + + R+L P+  ++  +I   C 
Sbjct: 332 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 391

Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
            G    A+ +L   + +G +P+ +T+  LI G    G++ E L +  +M  + + P +  
Sbjct: 392 RGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNI 451

Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
           Y  LIS LC+   L  A    + M   ++ P   +Y +L+   +   N   A  + E M 
Sbjct: 452 YNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFME 511

Query: 366 SEGLKPS 372
            +G++P 
Sbjct: 512 HKGVRPD 518



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 147/318 (46%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P   T  +LI+ L K G L+    +   +  +  SP V +  S+I  + +     + MV+
Sbjct: 272 PTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVI 331

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           LK+M       D I ++ ++       ++  A     E ++R  + N   YT  I  +C 
Sbjct: 332 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 391

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            G++  A+ L+ EM   G  P   TF  LI G   A ++ E+L   E+M  R++ P  + 
Sbjct: 392 RGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNI 451

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I  LC+      A  +L   L+K   P+E  Y+ LI G+ +   + +  K++  ME
Sbjct: 452 YNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFME 511

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
           +K + P + +  ++I   CQ G + EA      M+    +P    Y +++  + ++GN  
Sbjct: 512 HKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLN 571

Query: 356 KALHLCEEMVSEGLKPST 373
            AL    +M+    KP+ 
Sbjct: 572 GALRWLCDMIKRKCKPNV 589



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 163/363 (44%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +RG S ++  +N++I  + K         I + M  +   P+  T  TLI+ LC  G 
Sbjct: 300 MRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 359

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           ++     L     +  +P  +  T LI        +     LL  M+ +    D + +  
Sbjct: 360 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 419

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++  V    +  AL+V E+M +R    +  +Y   I   C+   +  A  +++EM    
Sbjct: 420 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 479

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
           ++P +  +  LI+G  +++ + ++    E M  + + P   + N MI+  C+ G   +A 
Sbjct: 480 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI 539

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
             ++     G  P+E TY+ +I GYAK+G +   L+   +M  +   P +  Y+SLI+  
Sbjct: 540 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 599

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
           C+ G  + A+  F  M++ +L P V  Y  L+G   +K    +A    E M+     P+ 
Sbjct: 600 CKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPND 659

Query: 374 SYL 376
             L
Sbjct: 660 VTL 662



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 136/320 (42%), Gaps = 1/320 (0%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCS-PMVIVNTSLILRIIQEERIEEGMV 114
           P  A +  L++A    G L    DM +R+  +  S P V     L+  ++++ R ++   
Sbjct: 131 PTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 190

Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
           L   ML ++   D  +  ++V        +E  L + E     G   +   Y   I  YC
Sbjct: 191 LYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 250

Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
             G +     L+ EME  G  P   T+  LI    K   +E+  S   +M  R L P+  
Sbjct: 251 RRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQ 310

Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
            +N +I  LC+C +A QA  +L      G  P+ IT++ LI G   EG +++      E 
Sbjct: 311 IYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 370

Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
             + ++P   +YT LI   C  G+L  A      M      P V  + +L+   +  G  
Sbjct: 371 IRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKV 430

Query: 355 AKALHLCEEMVSEGLKPSTS 374
           ++AL + E+M    + P  +
Sbjct: 431 SEALIVREKMTERQVFPDVN 450



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 79/382 (20%), Positives = 133/382 (34%), Gaps = 94/382 (24%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
            A D+   +  RG +  +++F  LIH +  + +      + + M E   +P+      LI
Sbjct: 397 AASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 456

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERI---------------- 109
           S LCK   L    ++L+ +  K   P   V  +LI   I+ E +                
Sbjct: 457 SGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVR 516

Query: 110 -------------------EEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVV 150
                               E ++ +  M +   I D   Y+ ++    K  NL  AL  
Sbjct: 517 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 576

Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
             +M+KR    N   Y++ I  YC+ G  + A  L   M+   L P   T+ +LI    K
Sbjct: 577 LCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFK 636

Query: 211 AKRIEESLSYCEQMM--------------------------------------------- 225
             ++  +  Y E M+                                             
Sbjct: 637 KDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVV 696

Query: 226 SRKLL-----PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAK 280
            +KL+     P  SA+N +I  LC     ++A         KG+ PN IT+  L+ G+  
Sbjct: 697 FKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCS 756

Query: 281 EGEIQEVLKLYYEMEYKSISPT 302
            G+          M +++I P 
Sbjct: 757 VGK---------SMNWRTILPN 769


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 171/372 (45%), Gaps = 4/372 (1%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E AF+ CR + Q   S S   ++ LI ++ +S R D        +      P+  T  ++
Sbjct: 322 EQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSV 380

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-- 122
           I  LCK G++ + + +L+ +  +   P +  ++ LI  + + ++I+E    L+ M RK  
Sbjct: 381 IQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKIS 440

Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEML-KRGFSANSFVYTTFIGAYCEYGKIEE 181
           +      +Y+ ++ +  K + +  A  ++  M+ +R F  +   Y+  I  +C+  ++  
Sbjct: 441 SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGR 500

Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
           A  L ++M +    P   T+N  + G  +  RI ++    E+M++    P    ++ +I 
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIH 560

Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
                    QA+ +    + +G  PN +TY+ L+ G  KE +  E  +L+ +M  +   P
Sbjct: 561 GFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP 620

Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
               YT+L+   C  GK+E+A + F  M S    P V  Y  L+      G   +A  L 
Sbjct: 621 DRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLF 680

Query: 362 EEMVSEGLKPST 373
           + MVS   KP T
Sbjct: 681 QVMVSRQCKPDT 692



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/439 (23%), Positives = 183/439 (41%), Gaps = 81/439 (18%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC-- 69
           R+L+ R F   + ++N L+  + +        ++++ M+     PN  T   L+ + C  
Sbjct: 118 RWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYE 177

Query: 70  --KGGQLQTYVDMLD---------------------------RIHG----KRCSPMVIVN 96
                 ++ + +M+D                           R+ G    KR +  +++ 
Sbjct: 178 RNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLK 237

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEM-L 155
            +L++  + +++  E   L + M++     D   YS +V A  K+ NL+ A  ++ EM +
Sbjct: 238 KALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAV 297

Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEA--NC-LMQEMENAGLKPYDETFNLLIEGCAKAK 212
           +     N+  +T F+   C+ GKIE+A   C  MQE  ++    YD    LLIE    + 
Sbjct: 298 ESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIE----SG 353

Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
           RI+++   C ++  R + PS    + +I+ LC+ G    A  +L   + +G+ P+  T+S
Sbjct: 354 RIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHS 413

Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYK----------------------------------- 297
            LI    K  +IQE  +    M+ K                                   
Sbjct: 414 MLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMV 473

Query: 298 ---SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
              S  P + +Y+ LI   C+  +L  A+K +K M   + VP V  Y + +   + KG  
Sbjct: 474 SERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRI 533

Query: 355 AKALHLCEEMVSEGLKPST 373
           A A  + EEMV+ G  P  
Sbjct: 534 ADAQGVYEEMVAAGCSPDV 552



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 153/315 (48%), Gaps = 2/315 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           + +R F   ++S++ LI    K D      ++Y+ M++    PN  T    ++ L + G+
Sbjct: 473 VSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGR 532

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           +     + + +    CSP VI  ++LI       + ++   L + M+ +    + + Y+ 
Sbjct: 533 IADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNC 592

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           +++   K    + A  ++ +M++RG   +   YTT +  +C  GKIE+A  +  EM + G
Sbjct: 593 LLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 652

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
             P    +N L++G  +A +  E+    + M+SR+  P   + N MI  L +      A 
Sbjct: 653 HDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAV 712

Query: 254 GML-TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
            +   +  D G SP+ +TY+ LI G   E  + E +K++ E++   +SP   A+  L+ +
Sbjct: 713 EVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772

Query: 313 LCQCGKLEEADKYFK 327
           + +CG + + +  FK
Sbjct: 773 I-KCGIVYQFEIRFK 786



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 150/322 (46%), Gaps = 2/322 (0%)

Query: 26  FNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRI 84
           +N+L++ + K+ +    + I+  M+    + P+  +   LI   CK  +L     +  ++
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508

Query: 85  HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
               C P V    + +  ++++ RI +   + + M+      D I YS +++     R  
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568

Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
           + A  ++E M+ RG   N+  Y   +   C+  K +EA+ L ++M   G  P   T+  L
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628

Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
           + G     +IE+++   ++M+S+   P   A+N +++     G   +A  +  + + +  
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688

Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK-SISPTLPAYTSLISSLCQCGKLEEAD 323
            P+ ++++ +I G +K   + + ++++  ME     SP L  Y SLI  LC   +L EA 
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748

Query: 324 KYFKIMKSHSLVPGVDIYESLV 345
           K FK +    L P    +  L+
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLL 770



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 154/334 (46%), Gaps = 4/334 (1%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI--RTLISALCKGGQ 73
           +RG+   + + + LI+ + K+D+        Q M   I   + +     +L+++LCK  +
Sbjct: 402 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461

Query: 74  LQTYVDMLDRIHGKRC-SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
           +     +   +  +R   P V+  + LI    + + +     L K+M+  N + +   Y+
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521

Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
             +   ++   +  A  VYEEM+  G S +   Y+T I  +    K ++A+ L + M + 
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581

Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
           G +P   T+N L+ G  K  + +E+     +M+ R   P    +  ++   C  G  +QA
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641

Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
             +    + KG  P+ + Y+ L+ G+ + G+  E  +L+  M  +   P   ++  +I  
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG 701

Query: 313 LCQCGKLEEADKYFKIM-KSHSLVPGVDIYESLV 345
           L +  +L++A + F+ M + H   P +  Y SL+
Sbjct: 702 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 735



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 140/315 (44%), Gaps = 40/315 (12%)

Query: 60  TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
           T+  +I  L  GG+  T+   L     +     V     L+ ++I+   +++   + ++M
Sbjct: 99  TVGAVIKHLRDGGEALTFFRWL---QARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155

Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
           + + ++ +   Y+++V +    RN + A+  + EM+ +GF  +S +Y          GK 
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
            E               +   F   +E     KR+       E M+ + LL      N +
Sbjct: 216 GE---------------FSRVFGRDLE-----KRVA-----VEMMLKKALL-----VNFV 245

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I+       A +A+ +    +  G  P+   YS+++  + K   + E  KL+ EM  +S 
Sbjct: 246 IQ-----DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESK 300

Query: 300 SP-TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
           +P    A+T+ +S LC+ GK+E+A +  + M+  SL     +Y+ L+ + +E G   KA 
Sbjct: 301 APLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAE 359

Query: 359 HLCEEMVSEGLKPST 373
             C E+    ++PS+
Sbjct: 360 EACLEIAGRNIQPSS 374



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 45/97 (46%)

Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
           E L  +  ++ ++    +  Y  L+  L +   L++A + F+ M +  +VP    Y  LV
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
                + N  +A+    EMV +G KPS++     + C
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTEC 208


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 5   EVAFDVCRYLEQRG-FSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIR 62
           + A +V R + +RG  +    ++ TLI    K  R +   +++  ML      P+     
Sbjct: 164 QAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYN 223

Query: 63  TLISALCKGGQLQTYV----DMLDRIHGKRCSPMVIVNTSLILR-IIQEERIEEGMVLLK 117
            LI   C  G+L   +    DM+     +R   M +   +L++  +  + R  +   +L+
Sbjct: 224 ALIGGYCDVGKLDVALQYREDMV-----QRGIAMTVATYNLLMHALFMDARASDAYAVLE 278

Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
            M +     D   Y++++    K  N + AL V+EEM ++G  A +  YT+ I  +   G
Sbjct: 279 EMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKG 338

Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
           +++E + L       G++P    +N LI        +E +     +M  +++ P    +N
Sbjct: 339 QVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYN 398

Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
            ++R  C  G   +A  ++     +G  P+ ++Y+ LI GY+ +G+I++ L++  EM  K
Sbjct: 399 TLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDK 458

Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
             +PTL  Y +LI  LC+  + ++A+   K M +  + P    Y SL+
Sbjct: 459 GFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLI 506



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 155/326 (47%), Gaps = 2/326 (0%)

Query: 49  MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKR-CSPMVIVNTSLILRIIQEE 107
           +L  +  PN  T  T+I+  C  G++Q  ++++  +  +   +P      +LI    +  
Sbjct: 138 LLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197

Query: 108 RIEEGMVLLKRMLRKNMIHDT-IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY 166
           R+E+ + +   ML K  +  + + Y+ ++     +  L+ AL   E+M++RG +     Y
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257

Query: 167 TTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMS 226
              + A     +  +A  +++EM+  G  P   T+N+LI G  K    +++L   E+M  
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQ 317

Query: 227 RKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
           + +  +   +  +I      G  ++ + +  +A+ KG  P+ + Y+ LI  +   G+++ 
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMER 377

Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
             ++  EME K I P    Y +L+   C  G+L+EA      M    + P +  Y +L+ 
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
            +  KG+   AL + +EM+ +G  P+
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPT 463



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 37/257 (14%)

Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM-ENAGLKPYDETFNLLIEGCAKA 211
           E+L++    N+  Y T I  +C  G+++ A  +M+EM E  G+ P   T+  LI G  K 
Sbjct: 137 ELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKI 196

Query: 212 KRIEESLSYCEQMMSR-KLLPSCSAFNEMIRRLCECGN---------------------- 248
            R+E+++   ++M+++ ++ PS   +N +I   C+ G                       
Sbjct: 197 GRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVAT 256

Query: 249 -------------AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
                        A  A  +L      GFSP+  TY+ LI GY KEG  ++ L+++ EM 
Sbjct: 257 YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K +  T   YTSLI    + G+++E D+ F +     + P V +Y +L+  H   G+  
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDME 376

Query: 356 KALHLCEEMVSEGLKPS 372
           +A  +  EM  + + P 
Sbjct: 377 RAYEIMAEMEKKRIPPD 393



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 7/146 (4%)

Query: 227 RKLLPSCSA-FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQ 285
           R  LP C+  FN M+R LC  G   +A  +L     +   PN +TY+ +I G+   G +Q
Sbjct: 109 RLRLPLCTTTFNIMLRHLCATGKPVRALELLR----QMPRPNAVTYNTVIAGFCARGRVQ 164

Query: 286 EVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYES 343
             L++  EM E   I+P    Y +LIS  C+ G++E+A K F +++    + P   +Y +
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNA 224

Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGL 369
           L+G + + G    AL   E+MV  G+
Sbjct: 225 LIGGYCDVGKLDVALQYREDMVQRGI 250


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 155/353 (43%), Gaps = 1/353 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG S++L ++N  I  + ++ R     R+   M      P+  T  TLI  LCK    Q
Sbjct: 215 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQ 273

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L R+  + C P      ++I    +   ++E   LLK  + K  + D + Y  ++
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                  ++E AL ++ E   +G   +  VY + +   C  G I  A  +M EM   G  
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  +T+N++I G  K   I ++       + +  LP    FN +I   C+      A  +
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    + G +P+ ITY+ ++ G  K G++ EV + + EM  K   P    Y  LI + C+
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 513

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             K+EEA K    M    L P    + +L+      G+   A  L +++  +G
Sbjct: 514 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 162/357 (45%), Gaps = 13/357 (3%)

Query: 22  SLISFNTLIHVVTKSDRND------LVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +L +FN ++H + K  R D      L+ ++ Q  +      N  T    I  LC+ G+L 
Sbjct: 186 NLAAFNKVLHALCK--RGDVLEAGLLLGKVIQRGMS----INLFTYNIWIRGLCEAGRLP 239

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V ++D +       +V  NT LI  + ++   +E M  L+RM+ +  + D   Y+ I+
Sbjct: 240 EAVRLVDGMRAYAVPDVVTYNT-LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 298

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K+  ++ A  + ++ + +GF  +   Y + I   C  G +E A  L  E +  G+K
Sbjct: 299 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 358

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N L++G      I  +L    +M      P    +N +I  LC+ GN   A  +
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +  A+ KG+ P+  T++ LI GY K  ++   L+L   M    I+P    Y S+++ LC+
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            GK+ E ++ F+ M      P    Y  L+          +A  +  +M  EGL P 
Sbjct: 479 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 535



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 153/347 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++NTLI  + K           + M+     P++ T  T+I   CK   +Q   ++L
Sbjct: 255 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 314

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
                K   P  +   SLI  +  E  +E  + L      K +  D + Y+ +V      
Sbjct: 315 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 374

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  AL V  EM + G   +   Y   I   C+ G I +A  +M +    G  P   TF
Sbjct: 375 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 434

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G  K  +++ +L   E+M    + P    +N ++  LC+ G   + N      + 
Sbjct: 435 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 494

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI  + +  +++E  K+  +M  + + P   ++ +LI   C+ G LE 
Sbjct: 495 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 554

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           A   F+ ++        D + +L+G    K N   A  + +EM+S+G
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 601



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 151/319 (47%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P++ T  +LI+ LC  G ++  +++ +    K   P ++V  SL+  +  +  I   + +
Sbjct: 324 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 383

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  M  +    D   Y++++    KM N+  A VV  + + +G+  + F + T I  YC+
Sbjct: 384 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 443

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K++ A  L++ M   G+ P   T+N ++ G  KA ++ E     ++M+ +   P+   
Sbjct: 444 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 503

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I   C     ++A+ ++     +G  P+ ++++ LI G+ + G+++    L+ ++E
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 563

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K  S T   + +LI +      +  A+K F  M S         Y  L+    +  N  
Sbjct: 564 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 623

Query: 356 KALHLCEEMVSEGLKPSTS 374
           +A     EM+ +G  PS S
Sbjct: 624 RAYMHLVEMIKKGFIPSMS 642



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 151/384 (39%), Gaps = 71/384 (18%)

Query: 59  ATIRTL----ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           ATI  L    I A  + G+L+  VD  +R+    C P      +++  ++     ++   
Sbjct: 48  ATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 107

Query: 115 LLKRMLRKNMIHD-------------------------------TIAYSLIVYAKVKMRN 143
           +  RML   +  D                                +AY  +V       +
Sbjct: 108 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 167

Query: 144 LESALVVYEEML-----------------------------------KRGFSANSFVYTT 168
              A  ++++ML                                   +RG S N F Y  
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           +I   CE G++ EA  L+  M    + P   T+N LI G  K    +E++ Y  +MM++ 
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            LP    +N +I   C+    ++A  +L  A+ KGF P+++TY  LI G   EG+++  L
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 346

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +L+ E + K I P +  Y SL+  LC  G +  A +    M      P +  Y  ++   
Sbjct: 347 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            + GN + A  +  + + +G  P 
Sbjct: 407 CKMGNISDATVVMNDAIMKGYLPD 430



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 139/316 (43%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+     +L+  LC  G +   + +++ +  + C P +     +I  + +   I +  V+
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +   + K  + D   ++ ++    K   L+SAL + E M + G + ++  Y + +   C+
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK+ E N   QEM   G  P   T+N+LIE   ++ ++EE+     +M    L P   +
Sbjct: 479 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 538

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN +I   C  G+ + A  +     +KG+S    T++ LIG ++ +  +    K++ EM 
Sbjct: 539 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML 598

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K        Y  LI   C+   ++ A  +   M     +P +  +  ++          
Sbjct: 599 SKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVF 658

Query: 356 KALHLCEEMVSEGLKP 371
           +A+ +   MV  G+ P
Sbjct: 659 QAVGIIHIMVKIGVVP 674



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 124/250 (49%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G+   + +FNTLI    K  + D   ++ + M E    P+  T  ++++ LCK G++  
Sbjct: 425 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 484

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             +    +  K C P  I    LI    +  ++EE   ++ +M ++ +  D ++++ ++Y
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +  +LE A ++++++ ++G+SA +  + T IGA+     +  A  +  EM + G + 
Sbjct: 545 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 604

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +LI+G  K   ++ +  +  +M+ +  +PS S F  +I  L       QA G++
Sbjct: 605 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 664

Query: 257 TLALDKGFSP 266
            + +  G  P
Sbjct: 665 HIMVKIGVVP 674



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/387 (21%), Positives = 164/387 (42%), Gaps = 46/387 (11%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N ++  +  +  +D   ++Y  ML     P+  T    + + C   +    + +L   
Sbjct: 88  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL--- 144

Query: 85  HGKRCSPM--VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
              R  P    +   +++  +       +   L  +ML  ++  +  A++ +++A  K  
Sbjct: 145 ---RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 201

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA------------------NC 184
           ++  A ++  ++++RG S N F Y  +I   CE G++ EA                  N 
Sbjct: 202 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNT 261

Query: 185 L----------------MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           L                ++ M N G  P D T+N +I+G  K   ++E+    +  + + 
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 321

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            +P    +  +I  LC  G+ ++A  +   A  KG  P+ + Y+ L+ G   +G I   L
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK--IMKSHSLVPGVDIYESLVG 346
           ++  EM  +   P +  Y  +I+ LC+ G + +A       IMK +  +P V  + +L+ 
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY--LPDVFTFNTLID 439

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
            + ++     AL L E M   G+ P T
Sbjct: 440 GYCKRLKLDSALQLVERMWEYGIAPDT 466



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 140/334 (41%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++    + +G    ++ +N+L+  +          ++   M E   +P+  T   +
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G +     +++    K   P V    +LI    +  +++  + L++RM    +
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DTI Y+ ++    K   +      ++EM+ +G   N   Y   I  +C   K+EEA+ 
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++ +M   GL P   +FN LI G  +   +E +    +++  +    +   FN +I    
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              N   A  +    L KG   +  TY  LI G  K   +        EM  K   P++ 
Sbjct: 583 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 642

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            +  +I+SL    ++ +A     IM    +VP V
Sbjct: 643 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 5/249 (2%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ I+ A V     + A  VY  ML  G S +   +T  + ++C   +   A  L++ +
Sbjct: 88  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 147

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            + G   Y      ++ G        ++    +QM+   + P+ +AFN+++  LC+ G+ 
Sbjct: 148 PHRGAVAY----CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 203

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +L   + +G S N  TY+  I G  + G + E ++L   M   ++ P +  Y +L
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 262

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+    +EA  Y + M +   +P    Y +++  + +     +A  L ++ V +G 
Sbjct: 263 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 322

Query: 370 KPSTSYLCS 378
            P     CS
Sbjct: 323 VPDQVTYCS 331


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 155/353 (43%), Gaps = 1/353 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           QRG S++L ++N  I  + ++ R     R+   M      P+  T  TLI  LCK    Q
Sbjct: 214 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQ 272

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             +  L R+  + C P      ++I    +   ++E   LLK  + K  + D + Y  ++
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
                  ++E AL ++ E   +G   +  VY + +   C  G I  A  +M EM   G  
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P  +T+N++I G  K   I ++       + +  LP    FN +I   C+      A  +
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +    + G +P+ ITY+ ++ G  K G++ EV + + EM  K   P    Y  LI + C+
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 512

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
             K+EEA K    M    L P    + +L+      G+   A  L +++  +G
Sbjct: 513 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 13/358 (3%)

Query: 22  SLISFNTLIHVVTKSDRND------LVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +L +FN ++H + K  R D      L+ ++ Q  +      N  T    I  LC+ G+L 
Sbjct: 185 NLAAFNKVLHALCK--RGDVLEAGLLLGKVIQRGMS----INLFTYNIWIRGLCEAGRLP 238

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
             V ++D +       +V  NT LI  + ++   +E M  L+RM+ +  + D   Y+ I+
Sbjct: 239 EAVRLVDGMRAYAVPDVVTYNT-LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 297

Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
               K+  ++ A  + ++ + +GF  +   Y + I   C  G +E A  L  E +  G+K
Sbjct: 298 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 357

Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
           P    +N L++G      I  +L    +M      P    +N +I  LC+ GN   A  +
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417

Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
           +  A+ KG+ P+  T++ LI GY K  ++   L+L   M    I+P    Y S+++ LC+
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477

Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            GK+ E ++ F+ M      P    Y  L+          +A  +  +M  EGL P  
Sbjct: 478 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 535



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 153/347 (44%)

Query: 22  SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
            ++++NTLI  + K           + M+     P++ T  T+I   CK   +Q   ++L
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313

Query: 82  DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
                K   P  +   SLI  +  E  +E  + L      K +  D + Y+ +V      
Sbjct: 314 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 373

Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
             +  AL V  EM + G   +   Y   I   C+ G I +A  +M +    G  P   TF
Sbjct: 374 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 433

Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
           N LI+G  K  +++ +L   E+M    + P    +N ++  LC+ G   + N      + 
Sbjct: 434 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 493

Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
           KG  PN ITY+ LI  + +  +++E  K+  +M  + + P   ++ +LI   C+ G LE 
Sbjct: 494 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 553

Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
           A   F+ ++        D + +L+G    K N   A  + +EM+S+G
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 600



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 151/319 (47%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P++ T  +LI+ LC  G ++  +++ +    K   P ++V  SL+  +  +  I   + +
Sbjct: 323 PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQV 382

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +  M  +    D   Y++++    KM N+  A VV  + + +G+  + F + T I  YC+
Sbjct: 383 MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCK 442

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
             K++ A  L++ M   G+ P   T+N ++ G  KA ++ E     ++M+ +   P+   
Sbjct: 443 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 502

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           +N +I   C     ++A+ ++     +G  P+ ++++ LI G+ + G+++    L+ ++E
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 562

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K  S T   + +LI +      +  A+K F  M S         Y  L+    +  N  
Sbjct: 563 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 622

Query: 356 KALHLCEEMVSEGLKPSTS 374
           +A     EM+ +G  PS S
Sbjct: 623 RAYMHLVEMIKKGFIPSMS 641



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 151/384 (39%), Gaps = 71/384 (18%)

Query: 59  ATIRTL----ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
           ATI  L    I A  + G+L+  VD  +R+    C P      +++  ++     ++   
Sbjct: 47  ATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 106

Query: 115 LLKRMLRKNMIHD-------------------------------TIAYSLIVYAKVKMRN 143
           +  RML   +  D                                +AY  +V       +
Sbjct: 107 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 166

Query: 144 LESALVVYEEML-----------------------------------KRGFSANSFVYTT 168
              A  ++++ML                                   +RG S N F Y  
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           +I   CE G++ EA  L+  M    + P   T+N LI G  K    +E++ Y  +MM++ 
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            LP    +N +I   C+    ++A  +L  A+ KGF P+++TY  LI G   EG+++  L
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 345

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
           +L+ E + K I P +  Y SL+  LC  G +  A +    M      P +  Y  ++   
Sbjct: 346 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405

Query: 349 LEKGNKAKALHLCEEMVSEGLKPS 372
            + GN + A  +  + + +G  P 
Sbjct: 406 CKMGNISDATVVMNDAIMKGYLPD 429



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 139/316 (43%)

Query: 56  PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
           P+     +L+  LC  G +   + +++ +  + C P +     +I  + +   I +  V+
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417

Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
           +   + K  + D   ++ ++    K   L+SAL + E M + G + ++  Y + +   C+
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477

Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
            GK+ E N   QEM   G  P   T+N+LIE   ++ ++EE+     +M    L P   +
Sbjct: 478 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 537

Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
           FN +I   C  G+ + A  +     +KG+S    T++ LIG ++ +  +    K++ EM 
Sbjct: 538 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEML 597

Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
            K        Y  LI   C+   ++ A  +   M     +P +  +  ++          
Sbjct: 598 SKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVF 657

Query: 356 KALHLCEEMVSEGLKP 371
           +A+ +   MV  G+ P
Sbjct: 658 QAVGIIHIMVKIGVVP 673



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 124/250 (49%)

Query: 17  RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
           +G+   + +FNTLI    K  + D   ++ + M E    P+  T  ++++ LCK G++  
Sbjct: 424 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 483

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
             +    +  K C P  I    LI    +  ++EE   ++ +M ++ +  D ++++ ++Y
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              +  +LE A ++++++ ++G+SA +  + T IGA+     +  A  +  EM + G + 
Sbjct: 544 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 603

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +LI+G  K   ++ +  +  +M+ +  +PS S F  +I  L       QA G++
Sbjct: 604 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 663

Query: 257 TLALDKGFSP 266
            + +  G  P
Sbjct: 664 HIMVKIGVVP 673



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/387 (21%), Positives = 164/387 (42%), Gaps = 46/387 (11%)

Query: 25  SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
           ++N ++  +  +  +D   ++Y  ML     P+  T    + + C   +    + +L   
Sbjct: 87  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL--- 143

Query: 85  HGKRCSPM--VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
              R  P    +   +++  +       +   L  +ML  ++  +  A++ +++A  K  
Sbjct: 144 ---RALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRG 200

Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA------------------NC 184
           ++  A ++  ++++RG S N F Y  +I   CE G++ EA                  N 
Sbjct: 201 DVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNT 260

Query: 185 L----------------MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
           L                ++ M N G  P D T+N +I+G  K   ++E+    +  + + 
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 320

Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
            +P    +  +I  LC  G+ ++A  +   A  KG  P+ + Y+ L+ G   +G I   L
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380

Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK--IMKSHSLVPGVDIYESLVG 346
           ++  EM  +   P +  Y  +I+ LC+ G + +A       IMK +  +P V  + +L+ 
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY--LPDVFTFNTLID 438

Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPST 373
            + ++     AL L E M   G+ P T
Sbjct: 439 GYCKRLKLDSALQLVERMWEYGIAPDT 465



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 140/334 (41%)

Query: 5   EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
           E A ++    + +G    ++ +N+L+  +          ++   M E   +P+  T   +
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401

Query: 65  ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
           I+ LCK G +     +++    K   P V    +LI    +  +++  + L++RM    +
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461

Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
             DTI Y+ ++    K   +      ++EM+ +G   N   Y   I  +C   K+EEA+ 
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521

Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
           ++ +M   GL P   +FN LI G  +   +E +    +++  +    +   FN +I    
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581

Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
              N   A  +    L KG   +  TY  LI G  K   +        EM  K   P++ 
Sbjct: 582 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 641

Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
            +  +I+SL    ++ +A     IM    +VP V
Sbjct: 642 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 114/249 (45%), Gaps = 5/249 (2%)

Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
           AY+ I+ A V     + A  VY  ML  G S +   +T  + ++C   +   A  L++ +
Sbjct: 87  AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 146

Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
            + G   Y      ++ G        ++    +QM+   + P+ +AFN+++  LC+ G+ 
Sbjct: 147 PHRGAVAY----CTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 202

Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
            +A  +L   + +G S N  TY+  I G  + G + E ++L   M   ++ P +  Y +L
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 261

Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
           I  LC+    +EA  Y + M +   +P    Y +++  + +     +A  L ++ V +G 
Sbjct: 262 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 321

Query: 370 KPSTSYLCS 378
            P     CS
Sbjct: 322 VPDQVTYCS 330


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 176/391 (45%), Gaps = 35/391 (8%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
           G +++  + + ++  + K  +  L   ++  ML++  + +E      I A C+   L   
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 78  VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
             ++ R+  +      +    L+  + +  R++E + +   M+   +  D + Y  +VY 
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 138 KVKMRNLESALVVYEEMLKRGFSA-----------------------------------N 162
             +M  LE AL +  +M++ GF                                     N
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
            F Y   I   C+  + ++A+ L +EM   GL+P + T+ +LI    K   IE++L   +
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
           +M  + +  +   +N +I   C+ G+  +A G+L+  + +G +P   +YS LI G  + G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
           ++   ++L+ EM  + I+     +T+LI+  C+  K++EA + F  M   +++P    + 
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
            ++  +   GN  KA  L ++MV  GLKP  
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN 548



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 173/371 (46%), Gaps = 3/371 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MR+ E A +V   +   G +   +++ TL++   + +  ++  RI   M+     P+EA 
Sbjct: 247 MRVQE-AVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEAN 305

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I  L K   ++    +  ++      P V    +LI ++ + ER ++   L K M 
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  + + Y+++++A  K   +E AL ++++M  +G     + Y + I  YC+ G ++
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L+  M   GL P   +++ LI G  +   +   +    +M  R +  +   F  +I
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 485

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
              C+     +A  +    +D    PNE+T++ +I GY   G I++  +LY +M    + 
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMK-SHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           P    Y SLIS LC    + +A+++   ++ S++++    +   L G   E G   +  H
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE-GRFTETYH 604

Query: 360 LCEEMVSEGLK 370
           L +EM   G+K
Sbjct: 605 LWDEMAVRGVK 615



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 174/397 (43%), Gaps = 38/397 (9%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           R + +RG + +  +F  LI+   K  + D   R++  M+++   PNE T   +I   C  
Sbjct: 467 REMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLV 526

Query: 72  GQLQTYVDMLDRIHGKRCSP-------------------------------MVIVN---- 96
           G ++    + D++      P                                 ++N    
Sbjct: 527 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 586

Query: 97  TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
           T+L+    +E R  E   L   M  + +  D +++++IVYA +K  + E + V++ EM +
Sbjct: 587 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 646

Query: 157 RGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
           +G   +   YT  I A   E   I+  NC  Q M   G  P   T  +LI    K+  + 
Sbjct: 647 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQ-MVVDGYSPNTVTHTVLINNLCKSGYLG 705

Query: 216 ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
            +   C++M++  +LP+   +N  +      G+ ++A  + + A+ +G   + ++++ LI
Sbjct: 706 SAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHS-AMLQGHLASIVSFNILI 764

Query: 276 GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
            G  K G+IQE + L  ++     SP   +Y+++I  LC+ G + +A + +  M    L 
Sbjct: 765 KGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLK 824

Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
           P V  Y   +      G   KAL +   M+  G++P+
Sbjct: 825 PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 45/366 (12%)

Query: 24  ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
           ++FN +I            +++Y  M+E    P+  T R+LIS LC    L + V   + 
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC----LTSGVSKANE 569

Query: 84  IHGKRCSPMVIVN----TSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
                 +   ++N    T+L+    +E R  E   L   M  + +  D +++++IVYA +
Sbjct: 570 FVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAAL 629

Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC-EYGKIEEANCLMQEMENAGLKPYD 198
           K  + E + V++ EM ++G   +   YT  I A   E   I+  NC  Q M   G  P  
Sbjct: 630 KQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ-MVVDGYSPNT 688

Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLP--------------------------- 231
            T  +LI    K+  +  +   C++M++  +LP                           
Sbjct: 689 VTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748

Query: 232 -------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
                  S  +FN +I+ LC+ G  ++A  +++   + GFSP+ I+YS +I    K G+I
Sbjct: 749 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
            +  +L+ EM YK + P + AY   I      G+ ++A   +  M    + P  D Y +L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 345 V-GIHL 349
           + GI L
Sbjct: 869 LSGISL 874



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 166/348 (47%), Gaps = 2/348 (0%)

Query: 14  LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
           +  +G  +++  +N+LI+   K    D    +   M++    P  A+   LI+ LC+ G 
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458

Query: 74  LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
           L + +++   +  +  +      T+LI    ++++++E   L  +M+  N+I + + +++
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
           ++     + N+  A  +Y++M++ G   +++ Y + I   C    + +AN  + ++EN+ 
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
               + +   L+ G  +  R  E+    ++M  R +     +F  ++    +  + +++ 
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
            +     ++G  P++I Y+ +I   +KE  + + L  + +M     SP    +T LI++L
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 698

Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN--KAKALH 359
           C+ G L  A+   K M + +++P    Y   +     +G+  KAK LH
Sbjct: 699 CKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLH 746


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 180/382 (47%), Gaps = 14/382 (3%)

Query: 6   VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
           ++F V   + ++G+    I+F TLI  +            +  ++      N+ +  TLI
Sbjct: 65  LSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLI 124

Query: 66  SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
           + LCK GQ +  ++ L RI GK   P V++  ++I  + +++ + +   L   M+ K + 
Sbjct: 125 NGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRIC 184

Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
              + Y+ ++     M  L+ A+ +  +M+    +   + ++  I A+C+ GK++EA  +
Sbjct: 185 PSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244

Query: 186 MQEMENAGLKPYDETFNLLIEG------CAKAKRI--------EESLSYCEQMMSRKLLP 231
              M    +KP   T+N L++G        KAK I        +E+++  E+M  +++ P
Sbjct: 245 FAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYP 304

Query: 232 SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLY 291
               +N +I  LC+ G    A   +     +G  P+  TY+ L+    K   + + ++L 
Sbjct: 305 DMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELL 364

Query: 292 YEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEK 351
            +++ + I P++  Y  LI+ LC+ G+L++A+K F+ +        V  Y +++    +K
Sbjct: 365 TKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKK 424

Query: 352 GNKAKALHLCEEMVSEGLKPST 373
           G   + L +  +M   G  P  
Sbjct: 425 GLFDETLAMVSKMKDSGCSPDA 446



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 163/351 (46%), Gaps = 17/351 (4%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A +  R ++ +     ++ +NT+I  + K    +  + +Y  M+     P+  T  TLI 
Sbjct: 136 ALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLIC 195

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
            LC   QL+  + +L ++  +  +P V   + LI    +E +++E   +   M+++++  
Sbjct: 196 GLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKP 255

Query: 127 DTIAYSLI--------VYAKVK------MRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
           + + Y+ +        V  K K      ++ ++ A+ ++EEM  +    +  +Y + I  
Sbjct: 256 NIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDG 315

Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
            C+ G+   A   + EM   G  P   T+N L++   K   +++++    ++  + + PS
Sbjct: 316 LCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPS 375

Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
              +N +I  LC+ G  K A  +    L KG++ +  TY+ +I G+ K+G   E L +  
Sbjct: 376 VCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVS 435

Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM---KSHSLVPGVDI 340
           +M+    SP       +I SL   G+ ++A K+ +++   K H   P   I
Sbjct: 436 KMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKFREMIVRGKCHREAPASTI 486



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/384 (20%), Positives = 164/384 (42%), Gaps = 49/384 (12%)

Query: 4   FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
           + +   + R +E  G + +L++ + LI+  ++  +N L + ++ ++L+     +  T  T
Sbjct: 28  YSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGSDAITFTT 87

Query: 64  LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
           LI  LC  G++   +   D++                        + +G  L        
Sbjct: 88  LIKGLCLKGEIHKALHFHDKV------------------------VAQGFKL-------- 115

Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
              + ++Y  ++    K+    +AL     +  +    +  +Y T I   C+   + +A 
Sbjct: 116 ---NQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAF 172

Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
            L  EM    + P   T+N LI G     ++++++    +M+   + P+   F+ +I   
Sbjct: 173 NLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAF 232

Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY-----AKEGE---------IQEVLK 289
           C+ G  K+A  +  + + +   PN +TY+ L+ G+      K+ +         + E + 
Sbjct: 233 CKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMN 292

Query: 290 LYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHL 349
           L+ EM +K I P +  Y SLI  LC+ G+   A K+   M      P +  Y SL+    
Sbjct: 293 LFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALC 352

Query: 350 EKGNKAKALHLCEEMVSEGLKPST 373
           +  +  KA+ L  ++  +G++PS 
Sbjct: 353 KNYHVDKAIELLTKLKDQGIQPSV 376



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 125/265 (47%)

Query: 84  IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
           +H K  +P +     ++  +++       + L ++M    +  + +  S+++    ++  
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
              +  V+  +LK+G+ +++  +TT I   C  G+I +A     ++   G K    ++  
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           LI G  K  +   +L +  ++  + + P    +N +I  LC+      A  +    + K 
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
             P+ +TY+ LI G     ++++ + L ++M  + I+PT+  ++ LI + C+ GK++EA 
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 324 KYFKIMKSHSLVPGVDIYESLVGIH 348
             F +M    + P +  Y SL+  H
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGH 267



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 112/252 (44%)

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            KN       +  I+ + VK  +    + ++ +M   G ++N    +  I  Y + G+  
Sbjct: 5   HKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNA 64

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            +  +   +   G      TF  LI+G      I ++L + ++++++    +  ++  +I
Sbjct: 65  LSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLI 124

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC+ G  + A   L     K   P+ + Y+ +I G  K+  + +   LY+EM  K I 
Sbjct: 125 NGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRIC 184

Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
           P++  Y +LI  LC   +L++A      M    + P V  +  L+    ++G   +A ++
Sbjct: 185 PSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNV 244

Query: 361 CEEMVSEGLKPS 372
              M+ E +KP+
Sbjct: 245 FAVMMKEDVKPN 256


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 152/333 (45%), Gaps = 37/333 (11%)

Query: 41  LVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSL 99
           LVW  Y+ +LE   YP        L+   CK G+++    + D I      P V+     
Sbjct: 119 LVWDFYKEVLE-CGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVV----- 172

Query: 100 ILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGF 159
                                         +++ ++   +K+ +L+    +   M   G 
Sbjct: 173 ------------------------------SFNTLINGYIKLGDLDEGFRLKSAMHASGA 202

Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
             + + Y+  I   C+ GK++EAN L  EM + GL P   TF  LI G  K ++++ ++ 
Sbjct: 203 QPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAME 262

Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
             +QM+S+ L P    +N +I  LC+ G  KQ + ++   +  G  P++I+Y+ LI G  
Sbjct: 263 IYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSC 322

Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
           KEG+++  L+L  +M  +SI     AYT+LIS LC+ G+  +A+K  + M S  L P   
Sbjct: 323 KEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNG 382

Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            Y  ++    +K +   A  L  EM  +G  P 
Sbjct: 383 TYTMIINEFCKKRDSKTASKLLREMQRDGPLPG 415



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 140/301 (46%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
            R F++ +D  + + + G+  SL  FN L+    K     L   ++  + +    P+  +
Sbjct: 114 FRYFKLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVS 173

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
             TLI+   K G L     +   +H     P V   + LI  + +E +++E   L   ML
Sbjct: 174 FNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEML 233

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
              ++ + + ++ +++   K   ++ A+ +Y++ML +G S +   Y T I   C+ G+++
Sbjct: 234 DNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELK 293

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
           + + L+ EM   GLKP   ++  LI+G  K   +E +L    +M+   +     A+  +I
Sbjct: 294 QVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALI 353

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
             LC  G A  A  ML   L  G  P+  TY+ +I  + K+ + +   KL  EM+     
Sbjct: 354 SCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPL 413

Query: 301 P 301
           P
Sbjct: 414 P 414



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 3/270 (1%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           MRL +  FD    + + G   S++SFNTLI+   K    D  +R+   M  +   P+  T
Sbjct: 152 MRLAQSVFDA---ITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYT 208

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              LI+ LCK G+L    ++ + +      P  +  T+LI    + E+++  M + K+ML
Sbjct: 209 YSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQML 268

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
            + +  D I Y+ ++Y   K   L+    + +EM+  G   +   YTT I   C+ G +E
Sbjct: 269 SQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLE 328

Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
            A  L  +M    ++  D  +  LI    +  R  ++     +M+S  L P    +  +I
Sbjct: 329 IALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMII 388

Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
              C+  ++K A+ +L      G  P  +T
Sbjct: 389 NEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 127/259 (49%), Gaps = 10/259 (3%)

Query: 123 NMIHDTIAYSLIVYAK------VKMRNLESALVVYEEMLK-RGFSANSF-VYTTFIGAYC 174
            MIH    + +++ AK      V  +  +SA  V+E +L+ +G   + F V++  + AY 
Sbjct: 18  TMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSGLMIAYL 77

Query: 175 EYGKIEEA-NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSC 233
           E G + +A  C     ++    P+D T   ++E   + +  +    + ++++      S 
Sbjct: 78  ESGFVRDAVQCFRLTKQHKIRVPFD-TCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASL 136

Query: 234 SAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYE 293
             FN +++R C+ G  + A  +       G  P+ ++++ LI GY K G++ E  +L   
Sbjct: 137 YFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSA 196

Query: 294 MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
           M      P +  Y+ LI+ LC+ GKL+EA++ F  M  + LVP    + +L+  H +   
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK 256

Query: 354 KAKALHLCEEMVSEGLKPS 372
              A+ + ++M+S+GL P 
Sbjct: 257 VDLAMEIYKQMLSQGLSPD 275


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 172/374 (45%), Gaps = 1/374 (0%)

Query: 1   MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
           M L E+A ++   + QRG S   +SF  ++       R     +    M+E     + AT
Sbjct: 202 MGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNAT 261

Query: 61  IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
              +I A C+ G +   V    ++     +P VI  T+LI  + ++  I++   LL+ M+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKI 179
           R+    +   ++ ++    K    E A  ++ ++++  G+  N   YT  I  YC+  K+
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
             A  L+  M+  GL P   T+  LI+G  K      +    + M      P+   +N +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
           I  LC+ G+  +A  +L      G   + +TY+ L+  + ++ +    L  + +M     
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
           +P + +YT+LIS  C+  +++E+++ F+   S  L+P    Y S++  +   GN + A+ 
Sbjct: 502 TPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 360 LCEEMVSEGLKPST 373
           L + M + G  P +
Sbjct: 562 LFQRMSNHGCAPDS 575



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 1/320 (0%)

Query: 18  GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ-T 76
           G + ++I+F  LI+ + K       + + + M+     PN  T  TLI  LCK G  +  
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348

Query: 77  YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
           +   L  +      P V   T++I    +E+++    +LL RM  + ++ +T  Y+ ++ 
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408

Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
              K+ N   A  + + M K GFS N + Y   I   C+ G ++EA  L+ ++   GL+ 
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQA 468

Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
              T+ +L+    +      SL +  +M+     P   ++  +I   C     K++  + 
Sbjct: 469 DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLF 528

Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
             A+  G  P + TY+ +I GY + G     +KL+  M     +P    Y +LIS LC+ 
Sbjct: 529 EEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKE 588

Query: 317 GKLEEADKYFKIMKSHSLVP 336
            KL++A   +  M    L P
Sbjct: 589 SKLDDARNLYDAMMDKGLSP 608



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 159/357 (44%), Gaps = 1/357 (0%)

Query: 16  QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
           +RGF +   +   +I    +    + V   +  M+E    PN      LI+ LCK G ++
Sbjct: 252 ERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIK 311

Query: 76  TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI-AYSLI 134
              ++L+ +  +   P V  +T+LI  + ++   E+   L  +++R +     +  Y+ +
Sbjct: 312 QAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAM 371

Query: 135 VYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGL 194
           +    K   L  A ++   M ++G   N+  YTT I  +C+ G    A  LM  M   G 
Sbjct: 372 INGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF 431

Query: 195 KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANG 254
            P   T+N +I+G  K   ++E+     ++    L      +  ++   C   +  ++  
Sbjct: 432 SPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLV 491

Query: 255 MLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
                L  GF+P+  +Y+ LI  + ++ +++E  +L+ E     + PT   YTS+I   C
Sbjct: 492 FFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYC 551

Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
           + G    A K F+ M +H   P    Y +L+    ++     A +L + M+ +GL P
Sbjct: 552 RYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 133/275 (48%), Gaps = 1/275 (0%)

Query: 99  LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
           +++   +  +++E + ++  M  + ++  T   + ++   V M  +E A  ++ EM +RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
            S +   +   + A C  G++ EA   +  M   G    + T  L+I+   +   +   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
            Y  +M+   L P+   F  +I  LC+ G+ KQA  +L   + +G+ PN  T++ LI G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 279 AKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
            K+G  ++  +L+ ++       P +  YT++I+  C+  KL  A+     M+   LVP 
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
            + Y +L+  H + GN  +A  L + M  EG  P+
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPN 434



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 144/315 (45%), Gaps = 3/315 (0%)

Query: 12  RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
           + +   G+  ++ ++  +I+   K D+ +    +   M E    PN  T  TLI   CK 
Sbjct: 354 KLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKV 413

Query: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
           G      +++D +  +  SP +    ++I  + ++  ++E   LL ++    +  D + Y
Sbjct: 414 GNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTY 473

Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
           ++++    +  +   +LV + +MLK GF+ +   YTT I  +C   +++E+  L +E  +
Sbjct: 474 TILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVS 533

Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
            GL P  +T+  +I G  +      ++   ++M +    P    +  +I  LC+      
Sbjct: 534 LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDD 593

Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
           A  +    +DKG SP E+T   L   Y K+ +    + +   +E +    T+    +L+ 
Sbjct: 594 ARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV---NTLVR 650

Query: 312 SLCQCGKLEEADKYF 326
            LC  GKL+ A  +F
Sbjct: 651 KLCSEGKLDMAALFF 665



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 109/232 (46%), Gaps = 1/232 (0%)

Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
           L+ A+ +  EM  +G   ++      +      G +E A  +  EM   G+ P   +F L
Sbjct: 170 LKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKL 229

Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
           ++  C    R+ E+  +   M+ R  +   +    +I   C+ G   +  G     ++ G
Sbjct: 230 MVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMG 289

Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
            +PN I ++ LI G  K+G I++  +L  EM  +   P +  +T+LI  LC+ G  E+A 
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAF 349

Query: 324 KYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
           + F K+++S    P V  Y +++  + ++    +A  L   M  +GL P+T+
Sbjct: 350 RLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTN 401



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 52/265 (19%), Positives = 101/265 (38%), Gaps = 40/265 (15%)

Query: 7   AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
           A+ +   +   G     +++  L+ V  +    +     +  ML+    P+  +  TLIS
Sbjct: 454 AYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIS 513

Query: 67  ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
             C+  Q++                             + ER+ E  V L       +I 
Sbjct: 514 XFCRQKQMK-----------------------------ESERLFEEAVSL------GLIP 538

Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
               Y+ ++    +  N   A+ +++ M   G + +S  Y   I   C+  K+++A  L 
Sbjct: 539 TKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLY 598

Query: 187 QEMENAGLKPYDET-FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
             M + GL P + T   L  E C K      +++  +++  R+ + +    N ++R+LC 
Sbjct: 599 DAMMDKGLSPCEVTRLTLAYEYCKKDDS-STAINVLDRLEKRQWIRT---VNTLVRKLCS 654

Query: 246 CGNAKQANGMLTLALDKGFSPNEIT 270
            G    A       LDK  + N +T
Sbjct: 655 EGKLDMAALFFHKLLDKEPNVNRVT 679


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.136    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,484,908,922
Number of Sequences: 23463169
Number of extensions: 212869930
Number of successful extensions: 675200
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7324
Number of HSP's successfully gapped in prelim test: 4381
Number of HSP's that attempted gapping in prelim test: 529836
Number of HSP's gapped (non-prelim): 66485
length of query: 384
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 240
effective length of database: 8,980,499,031
effective search space: 2155319767440
effective search space used: 2155319767440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)