BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016681
(384 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ECH5|PP107_ARATH Pentatricopeptide repeat-containing protein At1g66345,
mitochondrial OS=Arabidopsis thaliana GN=At1g66345 PE=1
SV=1
Length = 544
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 258/366 (70%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
+R E+ FDV + L GF+LS+I+ NTLIH +KS +DLVWRIY+ ++ YPNE T
Sbjct: 177 IRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEIT 236
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
IR +I LCK G+L+ VD+LDRI GKRC P VIVNTSL+ R+++E RIEE M LLKR+L
Sbjct: 237 IRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLL 296
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
KNM+ DTI YS++VYAK K +L SA V++EML+RGFSANSFVYT F+ CE G ++
Sbjct: 297 MKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVK 356
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
EA L+ EME +G+ PYDETFN LI G A+ E+ L YCE M++R L+PSCSAFNEM+
Sbjct: 357 EAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMV 416
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ + + N +AN +LT ++DKGF P+E TYSHLI G+ + +I + LKL+YEMEY+ +S
Sbjct: 417 KSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMS 476
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + SLI LC CGK+E +KY KIMK + P DIY++L+ + G+K A +
Sbjct: 477 PGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRV 536
Query: 361 CEEMVS 366
EM+S
Sbjct: 537 YNEMIS 542
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 6/252 (2%)
Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
+ + L+V K+R LE V++ + GF+ + T I Y KI++ + E
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLI-HYSSKSKIDDLVWRIYE 223
Query: 189 ME-NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECG 247
+ + P + T ++I+ K R++E + +++ ++ LPS ++ R+ E
Sbjct: 224 CAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 248 NAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT 307
+++ +L L K + I YS ++ AKEG++ K++ EM + S YT
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 308 SLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSE 367
+ C+ G ++EA++ M+ + P + + L+G G + K L CE MV+
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 368 GLKPSTSYLCSA 379
GL PS CSA
Sbjct: 404 GLMPS----CSA 411
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 139/328 (42%), Gaps = 8/328 (2%)
Query: 48 HMLENIRYPNEATIRTLI-SALCKGGQLQTYVD-MLDRIHGKRCSPMVIVNTSLILRIIQ 105
H+L R +A R LI S+L VD +LD +P+V L+++
Sbjct: 121 HILVKARLLIDA--RALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVF---DLLVQCYA 175
Query: 106 EER-IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSF 164
+ R +E G + KR+ I + +++ K + + +YE + + N
Sbjct: 176 KIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEI 235
Query: 165 VYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
I C+ G+++E L+ + P L+ + RIEES+S +++
Sbjct: 236 TIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL 295
Query: 225 MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEI 284
+ + ++ ++ ++ + G+ A + L +GFS N Y+ + ++G++
Sbjct: 296 LMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDV 355
Query: 285 QEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
+E +L EME +SP + LI + G E+ +Y ++M + L+P + +
Sbjct: 356 KEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEM 415
Query: 345 VGIHLEKGNKAKALHLCEEMVSEGLKPS 372
V + N +A + + + +G P
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPD 443
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 183/373 (49%), Gaps = 1/373 (0%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRN-DLVWRIYQHMLENIRYPNEA 59
+ L + A + + GF ++S+N ++ +S RN +++ MLE+ PN
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVF 206
Query: 60 TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
T LI C G + + + D++ K C P V+ +LI + +I++G LL+ M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
K + + I+Y++++ + ++ V EM +RG+S + Y T I YC+ G
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
+A + EM GL P T+ LI KA + ++ + +QM R L P+ + +
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
+ + G +A +L D GFSP+ +TY+ LI G+ G++++ + + +M+ K +
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
SP + +Y++++S C+ ++EA + + M + P Y SL+ E+ +A
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 360 LCEEMVSEGLKPS 372
L EEM+ GL P
Sbjct: 507 LYEEMLRVGLPPD 519
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 183/390 (46%), Gaps = 30/390 (7%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
R+ EV+F V + +RG+SL +++NTLI K ++ ML + P+ T
Sbjct: 290 RMKEVSF-VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
+LI ++CK G + ++ LD++ + P T+L+ Q+ + E +L+ M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
+ Y+ ++ +E A+ V E+M ++G S + Y+T + +C ++E
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
A + +EM G+KP T++ LI+G + +R +E+ E+M+ L P + +I
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQE----VLKLYYE---- 293
C G+ ++A + ++KG P+ +TYS LI G K+ +E +LKL+YE
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 294 --------------MEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
+E+KS+ SLI C G + EAD+ F+ M + P
Sbjct: 589 SDVTYHTLIENCSNIEFKSV-------VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641
Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
Y ++ H G+ KA L +EMV G
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 168/342 (49%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
+VA + +E +G +++++NTLI K + D +++ + M PN + +
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
I+ LC+ G+++ +L ++ + S + +LI +E + +V+ MLR +
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
I Y+ ++++ K N+ A+ ++M RG N YTT + + + G + EA
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
+++EM + G P T+N LI G ++E++++ E M + L P +++ ++ C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
+ +A + ++KG P+ ITYS LI G+ ++ +E LY EM + P
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
YT+LI++ C G LE+A + M ++P V Y L+
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 174/413 (42%), Gaps = 88/413 (21%)
Query: 13 YLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
+L+Q RG + ++ TL+ ++ + +R+ + M +N P+ T LI+ C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 70 KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
G+++ + +L+ + K SP V+ ++++ + ++E + + + M+ K + DTI
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
YS ++ + R + A +YEEML+ G + F YT I AYC G +E+A L EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 190 ENAGLKPYDETFNLLIEGCAK------AKRI------EESL------------------- 218
G+ P T+++LI G K AKR+ EES+
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 219 -------SYC------------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
+C E M+ + P +A+N MI C G+ ++A +
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
+ GF + +T L+ KEG++ E+ S+I + + +L
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNEL-------------------NSVIVHVLRSCEL 707
Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
EA++ + LV I+ +GN L + EM +G P+
Sbjct: 708 SEAEQ----------------AKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 128/312 (41%), Gaps = 15/312 (4%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E A V ++++G S ++S++T++ +S D R+ + M+E P+ T +L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
I C+ + + D+ + + P T+LI E +E+ + L M+ K +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 125 IHDTIAYSLIVYAKVKMRNLESAL-----VVYEEMLKRGFSANSFV----------YTTF 169
+ D + YS+++ K A + YEE + + ++ + +
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
I +C G + EA+ + + M KP +N++I G +A I ++ + ++M+
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Query: 230 LPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLK 289
L +++ L + G + N ++ L L+ +EG + VL
Sbjct: 672 LLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLD 731
Query: 290 LYYEMEYKSISP 301
+ EM P
Sbjct: 732 VLAEMAKDGFLP 743
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 109/276 (39%), Gaps = 50/276 (18%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A V R + ++G I++++LI + R +Y+ ML P+E T LI+
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI----------------LRIIQEERIE 110
A C G L+ + + + + K P V+ + LI L++ EE +
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 111 -----------------------------EGMV-----LLKRMLRKNMIHDTIAYSLIVY 136
+GM+ + + ML KN D AY+++++
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
+ ++ A +Y+EM+K GF ++ + A + GK+ E N ++ + +
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS 708
Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
E +L+E + ++ L +M LP+
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 178/359 (49%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
R AF + + G+ + FNTL++ + R + M+E P T+
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
TL++ LC G++ V ++DR+ P + ++ + + + M LL++M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
+N+ D + YS+I+ K +L++A ++ EM +GF A+ Y T IG +C G+ ++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
L+++M + P TF++LI+ K ++ E+ ++MM R + P+ +N +I
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
C+ ++A M+ L + KG P+ +T++ LI GY K I + L+L+ EM + +
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
Y +L+ CQ GKLE A K F+ M S + P + Y+ L+ + G KAL +
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 175/394 (44%), Gaps = 35/394 (8%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+ GF + +++ +++V+ KS + L + + M E + +I LCK G L
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
++ + + K +I +LI R ++G LL+ M+++ + + + +S+++
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
+ VK L A + +EM++RG + N+ Y + I +C+ ++EEA ++ M + G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P TFN+LI G KA RI++ L +M R ++ + +N +++ C+ G + A +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
+ + P+ ++Y L+ G GE+++ L+++ ++E
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
K + AY +IS LC+ L +AD F+ M P
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
Y L+ HL + A L EEM S G S
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVS 614
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 175/369 (47%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
+E+ +C+ +E +G + S+ + + +I+ + + + +++ P+ T
Sbjct: 104 YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNT 163
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
L++ LC ++ ++++DR+ P +I +L+ + ++ + +VL+ RM+
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ + Y ++ K A+ + +M +R ++ Y+ I C+ G ++ A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L EME G K T+N LI G A R ++ M+ RK+ P+ F+ +I
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
+ G ++A+ +L + +G +PN ITY+ LI G+ KE ++E +++ M K P +
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
+ LI+ C+ ++++ + F+ M ++ Y +LV + G A L +E
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 364 MVSEGLKPS 372
MVS ++P
Sbjct: 464 MVSRRVRPD 472
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 163/367 (44%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A D+ R + Q ++I FN L + K+ + +LV + + M + T+ +I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
C+ +L + +I P ++ +L+ + E R+ E + L+ RM+
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
I + +V + A+V+ + M++ GF N Y + C+ G+ A L+
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
++ME +K ++++I+G K ++ + + +M + +N +I C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G +L + + SPN +T+S LI + KEG+++E +L EM + I+P Y
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
SLI C+ +LEEA + +M S P + + L+ + + L L EM
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 367 EGLKPST 373
G+ +T
Sbjct: 432 RGVIANT 438
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 162/362 (44%), Gaps = 39/362 (10%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AF++ +E +GF +I++NTLI + R D ++ + M++ PN T LI
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
+ K G+L+ +L + + +P I SLI +E R+EE + ++ M+ K
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D + +++++ K ++ L ++ EM RG AN+ Y T + +C+ GK+E A L
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL----------------- 229
QEM + ++P ++ +L++G +E++L ++ K+
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 230 ------------LP------SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITY 271
LP A+N MI LC + +A+ + ++G +P+E+TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 272 SHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS 331
+ LI + + + +L EM+ S PA S + + E DK F M S
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMK----SSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
Query: 332 HS 333
+
Sbjct: 638 TT 639
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 139/312 (44%)
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
R +S+ G + VD+ + R P VI L I + ++ E + L K+M
Sbjct: 57 RDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
K + H S+++ + R L A +++K G+ ++ ++ T + C ++ E
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
A L+ M G KP T N L+ G ++ +++ ++M+ P+ + ++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
+C+ G A +L ++ + + YS +I G K+G + L+ EME K
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
+ Y +LI C G+ ++ K + M + P V + L+ +++G +A L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 362 EEMVSEGLKPST 373
+EM+ G+ P+T
Sbjct: 357 KEMMQRGIAPNT 368
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 89/204 (43%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
E A + + +G +++FN LI+ K++R D +++ M N T T
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
L+ C+ G+L+ + + +R P ++ L+ + +E+ + + ++ +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
M D Y +I++ ++ A ++ + +G ++ Y I C + +A+
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 184 CLMQEMENAGLKPYDETFNLLIEG 207
L ++M G P + T+N+LI
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRA 587
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 179/359 (49%)
Query: 6 VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
+AF + + G+ + I+F+TLI+ + R + M+E P+ TI TL+
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200
Query: 66 SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
+ LC G+ + ++D++ C P + ++ + + + M LL++M +N+
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
D + YS+I+ K +L++A ++ EM +G + N Y IG +C G+ ++ L
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
+++M + P TF++LI+ K ++ E+ ++M+ R + P + +I C+
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
+ +AN M+ L + KG PN T++ LI GY K I + L+L+ +M + +
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
Y +LI C+ GKL A + F+ M S + P + Y+ L+ + G KAL + E++
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 171/349 (48%)
Query: 24 ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
+++ +++V+ KS + L + + M E + +I LCK G L ++ +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 84 IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
+ K + +I LI R ++G LL+ M+++ + + + +S+++ + VK
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
L A +++EM+ RG + ++ YT+ I +C+ +++AN ++ M + G P TFN+
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
LI G KA RI++ L +M R ++ +N +I+ CE G A + + +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
PN +TY L+ G GE ++ L+++ ++E + + Y +I +C K+++A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
F + + PGV Y ++G +KG ++A L +M +G P
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 175/369 (47%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
+++ +C+ +E +G + +L + + +I+ + + L + +++ PN T T
Sbjct: 104 YDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFST 163
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI+ LC G++ ++++DR+ P +I +L+ + + E M+L+ +M+
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ + Y ++ K A+ + +M +R ++ Y+ I C++G ++ A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L EME G+ T+N+LI G A R ++ M+ RK+ P+ F+ +I
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
+ G ++A + + +G +P+ ITY+ LI G+ KE + + ++ M K P +
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
+ LI+ C+ ++++ + F+ M +V Y +L+ E G A L +E
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 364 MVSEGLKPS 372
MVS + P+
Sbjct: 464 MVSRKVPPN 472
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 144/306 (47%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AF++ +E +G + ++I++N LI + R D ++ + M++ PN T LI
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
+ K G+L+ ++ + + +P I TSLI +E +++ ++ M+ K
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ +++++ K ++ L ++ +M RG A++ Y T I +CE GK+ A L
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
QEM + + P T+ +L++G E++L E++ K+ +N +I +C
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
A + KG P TY+ +IGG K+G + E L+ +ME +P Y
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 307 TSLISS 312
LI +
Sbjct: 582 NILIRA 587
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 166/353 (47%), Gaps = 2/353 (0%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDM 80
++I F+ L + K+ + DLV + + M L+ I + N T+ +I+ C+ +L
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFSA 145
Query: 81 LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
+ +I P I ++LI + E R+ E + L+ RM+ D I + +V
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
A+++ ++M++ G N+ Y + C+ G+ A L+++ME +K
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
++++I+G K ++ + + +M + + + +N +I C G +L +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
+ +PN +T+S LI + KEG+++E +L+ EM ++ I+P YTSLI C+ L+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+A++ +M S P + + L+ + + L L +M G+ T
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 1/292 (0%)
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
D IH R P VI + L I + ++ + + L K+M K + H+ S+++ +
Sbjct: 78 DMIH-SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 136
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
R L A +++K G+ N+ ++T I C G++ EA L+ M G KP T
Sbjct: 137 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 196
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N L+ G + + E++ ++M+ P+ + ++ +C+ G A +L +
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
+ + + YS +I G K G + L+ EME K I+ + Y LI C G+ ++
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
K + M + P V + L+ +++G +A L +EM+ G+ P T
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 125/299 (41%), Gaps = 35/299 (11%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R + +R + ++++F+ LI K + +++ M+ P+ T +LI CK
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
L M+D + K C P + LI + RI++G+ L ++M + ++ DT+ Y
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA--------- 182
+ ++ ++ L A +++EM+ R N Y + C+ G+ E+A
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 183 ----------NCLMQEMENA----------------GLKPYDETFNLLIEGCAKAKRIEE 216
N ++ M NA G+KP +T+N++I G K + E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 275
+ +M P +N +IR G+A ++ ++ GFS + T +I
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 179/363 (49%), Gaps = 1/363 (0%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
L++ S ++++NT++ + S + + ML+ YP+ T LI A C+
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ + +LD + + C+P V+ L+ I +E R++E + L M + I +++
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
I+ + A + +ML++GFS + + I C G + A ++++M G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
+P ++N L+ G K K+++ ++ Y E+M+SR P +N M+ LC+ G + A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
+L KG SP ITY+ +I G AK G+ + +KL EM K + P Y+SL+ L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS- 372
+ GK++EA K+F + + P + S++ + +A+ M++ G KP+
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 373 TSY 375
TSY
Sbjct: 555 TSY 557
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 176/370 (47%), Gaps = 3/370 (0%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
E F + G +I TLI + + +I + + + P+ T
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
+IS CK G++ + +LDR+ SP V+ +++ + ++++ M +L RML+++
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
D I Y++++ A + + A+ + +EM RG + + Y + C+ G+++EA
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
+ +M ++G +P T N+++ R ++ M+ + PS FN +I L
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C G +A +L G PN ++Y+ L+ G+ KE ++ ++ M + P +
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
Y +++++LC+ GK+E+A + + S P + Y +++ + G KA+ L +E
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 364 MVSEGLKPST 373
M ++ LKP T
Sbjct: 475 MRAKDLKPDT 484
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 121/272 (44%), Gaps = 3/272 (1%)
Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
++++ +EEG L+ M+ + D I + ++ ++ A + E + G
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
+ Y I YC+ G+I A ++ M + P T+N ++ + ++++++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
++M+ R P + +I C A +L D+G +P+ +TY+ L+ G KE
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
G + E +K +M P + + ++ S+C G+ +A+K M P V +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
L+ KG +A+ + E+M G +P++
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 118/233 (50%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
L A D+ + Q G + +S+N L+H K + D + M+ YP+ T
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
T+++ALCK G+++ V++L+++ K CSP++I ++I + + + + + LL M K
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
++ DTI YS +V + ++ A+ + E + G N+ + + + C+ + + A
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
+ M N G KP + ++ +LIEG A +E+L ++ ++ L+ SA
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 160/311 (51%)
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
LI LCK ++ V + + GK P V+ +L+ + + + E G+ ++ ML
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
A S +V K +E AL + + ++ G S N FVY I + C+ K EA
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
L M GL+P D T+++LI+ + +++ +LS+ +M+ L S +N +I
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
C+ G+ A G + ++K P +TY+ L+GGY +G+I + L+LY+EM K I+P+
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
+ +T+L+S L + G + +A K F M ++ P Y ++ + E+G+ +KA +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 363 EMVSEGLKPST 373
EM +G+ P T
Sbjct: 567 EMTEKGIVPDT 577
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 172/364 (47%), Gaps = 2/364 (0%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A + + L + ++++ TL++ + K ++ + ML P+EA + +L+
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
L K G+++ ++++ R+ SP + V +LI + + + E +L RM + +
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ + YS+++ + L++AL EM+ G + + Y + I +C++G I A M
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 187 QEMENAGLKPYDETFNLLIEG-CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
EM N L+P T+ L+ G C+K K I ++L +M + + PS F ++ L
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGK-INKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
G + A + + PN +TY+ +I GY +EG++ + + EM K I P +
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
Y LI LC G+ EA + + + Y L+ +G +AL +C+EMV
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 366 SEGL 369
G+
Sbjct: 640 QRGV 643
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 162/336 (48%), Gaps = 6/336 (1%)
Query: 13 YLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRTLISALC 69
++E G ++++ +N LI + K + VW I + + P+ T TL+ LC
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQK---VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 70 KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
K + + ++M+D + R SP +SL+ + + +IEE + L+KR++ + +
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
Y+ ++ + K R A ++++ M K G N Y+ I +C GK++ A + EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
+ GLK +N LI G K I + + +M+++KL P+ + ++ C G
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
+A + KG +P+ T++ L+ G + G I++ +KL+ EM ++ P Y +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
I C+ G + +A ++ K M +VP Y L+
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 159/350 (45%)
Query: 24 ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
+++N +I + + + M E P+ + R LI LC GQ +D
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 84 IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
+H C I T L+ +E ++EE + + + M+++ + D + Y +++ +K ++
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
+ + +EM RG + +YT+ I A + G +EA + M N G P + T+
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
+I G KA + E+ C +M +P+ + + L + Q L A+ KG
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG 782
Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
N TY+ LI G+ ++G I+E +L M +SP YT++I+ LC+ +++A
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ + M + P Y +L+ G KA L EM+ +GL P+
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 157/348 (45%)
Query: 25 SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
+ + L+H + K L ++ M+ P+ +I +LC+ L +M+ +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 85 HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
C ++ LI + +++++ E + + K + K++ D + Y +VY K++
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
E L + +EML FS + ++ + + GKIEEA L++ + + G+ P +N L
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
I+ K ++ E+ ++M L P+ ++ +I C G A L +D G
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
+ Y+ LI G+ K G+I EM K + PT+ YTSL+ C GK+ +A +
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
+ M + P + + +L+ G A+ L EM +KP+
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 1/276 (0%)
Query: 99 LILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
LI ++ R+ +G+++ K M+ K +++ + S +++ VK R+ A+ ++ +M+
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
G + ++YT I + CE + A ++ ME G +N+LI+G K +++ E+
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
+ + + + L P + ++ LC+ + M+ L FSP+E S L+ G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
K G+I+E L L + +SP L Y +LI SLC+ K EA+ F M L P
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
Y L+ + +G AL EMV GLK S
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 156/386 (40%), Gaps = 35/386 (9%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
+++++ +L+ + + R+Y M P+ T TL+S L + G ++ V +
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+ + P + +I +E + + LK M K ++ DT +Y +++
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A V + + K N YT + +C GK+EEA + QEM G+ +
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
+LI+G K K + ++M R L P + MI + G+ K+A G+ L ++
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP-------------------- 301
+G PNE+TY+ +I G K G + E L +M+ S P
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 302 ---------------TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG 346
Y LI C+ G++EEA + M + P Y +++
Sbjct: 771 KAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 347 IHLEKGNKAKALHLCEEMVSEGLKPS 372
+ + KA+ L M +G++P
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPD 856
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 2/268 (0%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
E A VC+ + QRG L L+ + LI K L + + + M + P++ +
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
+I A K G + + D + + C P + T++I + + + E VL +M +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 124 MIHDTIAYSLIVYAKVKMR-NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
+ + + Y + K +++ A+ ++ +LK G AN+ Y I +C G+IEEA
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEA 806
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
+ L+ M G+ P T+ +I + +++++ M + + P A+N +I
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEIT 270
C G +A + L +G PN T
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 136/336 (40%), Gaps = 34/336 (10%)
Query: 69 CKGGQLQTYVDMLDRI-HGKRCSPMVIVNTSLILRIIQEERIEE-----------GMVLL 116
C+ + + +VD + RI GKR S + +++ L+ R ++ +EE G+
Sbjct: 33 CRIAEDKQFVDAVKRIVRGKR-SWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFF 91
Query: 117 KRM-LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY-- 173
+ L + H T ++ ++++A VK NL + L S V+ Y
Sbjct: 92 NFLGLHRGFDHSTASFCILIHALVKA-NLFWPASSLLQTLLLRALKPSDVFNVLFSCYEK 150
Query: 174 CEYGKIEEANCLMQE-----------------MENAGLKPYDETFNLLIEGCAKAKRIEE 216
C+ + L+Q + L P T + L+ G K +
Sbjct: 151 CKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGL 210
Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
++ M+S + P + +IR LCE + +A M+ G N + Y+ LI
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
G K+ ++ E + + ++ K + P + Y +L+ LC+ + E + M P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
SLV ++G +AL+L + +V G+ P+
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 119/306 (38%), Gaps = 47/306 (15%)
Query: 96 NTSLILRIIQEE-RIEEGMVLL---KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVY 151
N S ++ QEE RI E + KR++R + S +V ++K ++E L+
Sbjct: 21 NVSSVIDSAQEECRIAEDKQFVDAVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGT 80
Query: 152 EE------------MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
+ L RGF ++ + I A + A+ L+Q + LKP D
Sbjct: 81 IDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSD- 139
Query: 200 TFNLLI---EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
FN+L E C + L + SR++L F MI ++
Sbjct: 140 VFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKV------------- 186
Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
P T S L+ G K ++L+ +M I P + YT +I SLC+
Sbjct: 187 ------SLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCEL 240
Query: 317 GKLEEADKYFKIMKSHSLVPGVDI----YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
L A K M +H G D+ Y L+ +K +A+ + +++ + LKP
Sbjct: 241 KDLSRA----KEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPD 296
Query: 373 TSYLCS 378
C+
Sbjct: 297 VVTYCT 302
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AF V + G+ I+F+TL++ R + M+E + P+ T+ TLI+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
LC G++ + ++DR+ P + ++ R+ + + L ++M +N+
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ YS+++ + K + + AL ++ EM +G A+ Y++ IG C GK ++ ++
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
+EM + P TF+ LI+ K ++ E+ +M++R + P +N +I C+
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
+AN M L + KG P+ +TYS LI Y K + + ++L+ E+ K + P Y
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
+L+ CQ GKL A + F+ M S + P V Y L+ + G KAL + E+M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 176/355 (49%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
GF +++ +++ + KS + L +++ M E + +I +LCK G
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+ + + + K V+ +SLI + + + ++G +L+ M+ +N+I D + +S ++
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
VK L A +Y EM+ RG + ++ Y + I +C+ + EAN + M + G +P
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T+++LI KAKR+++ + ++ S+ L+P+ +N ++ C+ G A +
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+ +G P+ +TY L+ G GE+ + L+++ +M+ ++ + Y +I +C
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
K+++A F + + P V Y ++G +KG+ ++A L +M +G P
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 176/370 (47%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
+++ C+ +E G + + +I+ + + + + + P+ T T
Sbjct: 86 YDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFST 145
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
L++ C G++ V ++DR+ + P ++ ++LI + + R+ E +VL+ RM+
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
D + Y ++ K N AL ++ +M +R A+ Y+ I + C+ G ++A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L EME G+K T++ LI G + ++ +M+ R ++P F+ +I
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
+ G +A + + +G +P+ ITY+ LI G+ KE + E +++ M K P +
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
Y+ LI+S C+ ++++ + F+ + S L+P Y +LV + G A L +E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 364 MVSEGLKPST 373
MVS G+ PS
Sbjct: 446 MVSRGVPPSV 455
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 157/350 (44%)
Query: 24 ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
I FN L V ++ + DLV + M N + T+ +I+ C+ +L +L R
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 84 IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
P I ++L+ E R+ E + L+ RM+ D + S ++
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
+ ALV+ + M++ GF + Y + C+ G A L ++ME +K +++
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
+I+ K +++LS +M + + ++ +I LC G ML + +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
P+ +T+S LI + KEG++ E +LY EM + I+P Y SLI C+ L EA+
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ F +M S P + Y L+ + + + L E+ S+GL P+T
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 144/309 (46%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
F+ A + +E +G ++++++LI + + D ++ + M+ P+ T
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI K G+L ++ + + + +P I SLI +E + E + M+ K
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
D + YS+++ + K + ++ + ++ E+ +G N+ Y T + +C+ GK+ A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L QEM + G+ P T+ +L++G + ++L E+M ++ +N +I +
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C A + DKG P+ +TY+ +IGG K+G + E L+ +M+ +P
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 304 PAYTSLISS 312
Y LI +
Sbjct: 561 FTYNILIRA 569
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 139/301 (46%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
++ +D+ + + R P I L + + ++ + + K M + HD +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
+++ + + L A V K G+ ++ ++T + +C G++ EA L+ M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
+P T + LI G R+ E+L ++M+ P + ++ RLC+ GN+ A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+ ++ + + YS +I K+G + L L+ EME K I + Y+SLI
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
LC GK ++ K + M +++P V + +L+ + +++G +A L EM++ G+ P
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 373 T 373
T
Sbjct: 350 T 350
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 144/304 (47%), Gaps = 3/304 (0%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R + R +++F+ LI V K + +Y M+ P+ T +LI CK
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
L M D + K C P ++ + LI + +R+++GM L + + K +I +TI Y
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
+ +V + L +A +++EM+ RG + Y + C+ G++ +A + ++M+
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
+ + +N++I G A +++++ S + + + P +N MI LC+ G+ +
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 252 ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME---YKSISPTLPAYTS 308
A+ + + G +P++ TY+ LI + + ++L EM+ + + S T+
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Query: 309 LISS 312
++S
Sbjct: 604 MLSD 607
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 93/224 (41%), Gaps = 42/224 (18%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
MRLF R + +G + I++NTL+ +S + + ++Q M+ P+ T
Sbjct: 405 MRLF-------REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
L+ LC G+L +++ ++ +Q+ R+ G+ +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEK--------------------MQKSRMTLGIGI----- 492
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
Y++I++ ++ A ++ + +G + Y IG C+ G +
Sbjct: 493 ----------YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQM 224
EA+ L ++M+ G P D T+N+LI + S+ E+M
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 178/353 (50%), Gaps = 2/353 (0%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TIRTLISALCKGGQLQTYVDM 80
S++ FN L+ + K ++ DLV + + M +N+R + + LI+ C+ QL + +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERM-QNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 81 LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
L ++ P ++ +SL+ +RI E + L+ +M +T+ ++ +++
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
A+ + + M+ RG + F Y T + C+ G I+ A L+++ME ++
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
+ +I+ K + ++L+ +M ++ + P+ +N +IR LC G A+ +L+ +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
++ +PN +T+S LI + KEG++ E KLY EM +SI P + Y+SLI+ C +L+
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
EA F++M S P V Y +L+ + + + L EM GL +T
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 174/357 (48%)
Query: 17 RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
RG L ++ T+++ + K DL + + M + + T+I ALC +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 77 YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
+++ + K P V+ SLI + R + LL M+ + + + + +S ++
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
A VK L A +Y+EM+KR + F Y++ I +C + +++EA + + M + P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
T+N LI+G KAKR+EE + +M R L+ + +N +I+ L + G+ A +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
+ G P+ ITYS L+ G K G++++ L ++ ++ + P + Y +I +C+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
GK+E+ F + + P V IY +++ KG K +A L EM +G P++
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 169/372 (45%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M F++ + ++ S L S+N LI+ + + L + M++ P+ T
Sbjct: 93 MNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C G ++ V ++D++ P + +LI + + E + L+ RM+
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
+ D Y +V K +++ AL + ++M K A+ +YTT I A C Y +
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L EM+N G++P T+N LI R ++ M+ RK+ P+ F+ +I
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + P+ TYS LI G+ + E ++ M K
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y +LI C+ ++EE + F+ M LV Y +L+ + G+ A +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 361 CEEMVSEGLKPS 372
++MVS+G+ P
Sbjct: 453 FKKMVSDGVPPD 464
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 168/367 (45%)
Query: 6 VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
+A V + + G+ +++ ++L++ R + M PN T TLI
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 66 SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
L + V ++DR+ + C P + +++ + + I+ + LLK+M + +
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
D + Y+ I+ A +N+ AL ++ EM +G N Y + I C YG+ +A+ L
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
+ +M + P TF+ LI+ K ++ E+ ++M+ R + P ++ +I C
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
+A M L + K PN +TY+ LI G+ K ++E ++L+ EM + +
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
Y +LI L Q G + A K FK M S + P + Y L+ + G KAL + E +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 366 SEGLKPS 372
++P
Sbjct: 493 KSKMEPD 499
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 155/329 (47%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A ++ ++ +G +++++N+LI + R R+ M+E PN T LI
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
A K G+L + D + + P + +SLI +R++E + + M+ K+
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ + Y+ ++ K + +E + ++ EM +RG N+ Y T I + G + A +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
++M + G+ P T+++L++G K ++E++L E + K+ P +N MI +C+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G + + KG PN I Y+ +I G+ ++G +E L+ EM+ P Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLV 335
+LI + + G + + K M+S V
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 140/301 (46%), Gaps = 2/301 (0%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
+L VD+ + R P ++ L+ I + + + + L +RM + +D +Y+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
+++ + L AL V +M+K G+ + ++ + YC +I EA L+ +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
+P TFN LI G + E+++ ++M++R P + ++ LC+ G+ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
+L ++KG + + Y+ +I + + L L+ EM+ K I P + Y SLI
Sbjct: 240 LSLLK-KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
LC G+ +A + M + P V + +L+ +++G +A L +EM+ + P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 372 S 372
Sbjct: 359 D 359
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 123/271 (45%)
Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
++ + ++++ + L M++ + + ++ ++ A KM + + + E M S +
Sbjct: 55 VLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD 114
Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
+ Y I +C ++ A ++ +M G +P T + L+ G KRI E+++ +
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
QM + P+ FN +I L A +A ++ + +G P+ TY ++ G K G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
+I L L +ME I + YT++I +LC + +A F M + + P V Y
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
SL+ G + A L +M+ + P+
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+R + ++++LI+ DR D +++ M+ +PN T TLI CK +++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+++ + + + +LI + Q + + K+M+ + D I YS+++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
K LE ALVV+E + K + + Y I C+ GK+E+ L + G+K
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P + +I G + EE+ + +M LP+ +N +IR G+ + +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 256 LTLALDKGFSPNEITYSHLI 275
+ GF + T S +I
Sbjct: 593 IKEMRSCGFVGDASTISMVI 612
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 35/239 (14%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E ++ R + QRG + +++NTLI + ++ D+ +I++ M+ + P+ T L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
+ LCK G+L E+ +V+ + + + M
Sbjct: 472 LDGLCKYGKL-----------------------------------EKALVVFEYLQKSKM 496
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
D Y++++ K +E ++ + +G N +YTT I +C G EEA+
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L +EM+ G P T+N LI + S ++M S + S + +I L
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 174/356 (48%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
GF+++ SF ++I ++ D R ML P + TLIS LCK G+
Sbjct: 443 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+++ + K + +L+ + + +++E + K +L + + D ++Y+ ++
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
+ L+ A + +EM+KRG +++ Y+ I K+EEA + + G+ P
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T++++I+GC KA+R EE + ++MMS+ + P+ +N +IR C G A +
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
KG SPN TY+ LI G + ++E L+ EM + + P + YT+LI + G
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
++ + + + M S ++ P Y ++G + GN +A L EM +G+ P +
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 174/366 (47%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A ++ + +G SL+ ++NTLI K+ + D R+ + ML N+ + ++I
Sbjct: 397 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 456
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
LC + + + + + SP + T+LI + + + + + L + L K +
Sbjct: 457 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 516
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
DT + +++ + L+ A + +E+L RG + Y T I C K++EA +
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
EM GLKP + T+++LI G ++EE++ + + +LP ++ MI C+
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
++ + K PN + Y+HLI Y + G + L+L +M++K ISP Y
Sbjct: 637 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
TSLI + ++EEA F+ M+ L P V Y +L+ + + G K L EM S
Sbjct: 697 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 756
Query: 367 EGLKPS 372
+ + P+
Sbjct: 757 KNVHPN 762
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 141/309 (45%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+GF + + N L+H + ++ + D +RI + +L + + TLIS C +L
Sbjct: 511 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 570
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
LD + + P + LI + ++EE + R M+ D YS+++
Sbjct: 571 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 630
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
K E ++EM+ + N+ VY I AYC G++ A L ++M++ G+
Sbjct: 631 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 690
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+ LI+G + R+EE+ E+M L P+ + +I + G + +
Sbjct: 691 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 750
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
L K PN+ITY+ +IGGYA++G + E +L EM K I P Y I +
Sbjct: 751 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810
Query: 316 CGKLEEADK 324
G + EA K
Sbjct: 811 QGGVLEAFK 819
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 169/371 (45%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
++ AF + +RG +LI+++ L+ +T++ R + + + M + PN
Sbjct: 324 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 383
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI + + G L +++ D + K S +LI + + + LLK ML
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ +++ ++ +SAL EML R S + TT I C++GK +A
Sbjct: 444 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 503
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L + N G T N L+ G +A +++E+ ++++ R + ++N +I
Sbjct: 504 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 563
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C +A L + +G P+ TYS LI G +++E ++ + + + + P +
Sbjct: 564 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 623
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
Y+ +I C+ + EE ++F M S ++ P +Y L+ + G + AL L E+
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 683
Query: 364 MVSEGLKPSTS 374
M +G+ P+++
Sbjct: 684 MKHKGISPNSA 694
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AF + + + RG + +S+NTLI + D + M++ P+ T LI
Sbjct: 537 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 596
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
L +++ + D P V + +I + ER EEG M+ KN+
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+T+ Y+ ++ A + L AL + E+M +G S NS YT+ I ++EEA L
Sbjct: 657 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 716
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
+EM GL+P + LI+G K ++ + +M S+ + P+ + MI
Sbjct: 717 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 776
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
GN +A+ +L +KG P+ ITY I GY K+G + E K E Y +I
Sbjct: 777 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAI 829
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 160/367 (43%), Gaps = 4/367 (1%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AFDV +G S + F T I+ K + + +++ M E PN T T+I
Sbjct: 261 AFDVV----CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 316
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
L G+ +++ + P +I + L+ + + +RI + +LK M +K
Sbjct: 317 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 376
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ I Y+ ++ + ++ +L A+ + + M+ +G S S Y T I YC+ G+ + A L+
Sbjct: 377 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 436
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
+EM + G +F +I + +L + +M+ R + P +I LC+
Sbjct: 437 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 496
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G +A + L+KGF + T + L+ G + G++ E ++ E+ + +Y
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 556
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
+LIS C KL+EA + M L P Y L+ +A+ ++
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616
Query: 367 EGLKPST 373
G+ P
Sbjct: 617 NGMLPDV 623
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE--QMMSRKLLPSCSAFNEMIRRLCEC 246
+ N G+ P T N+L+ +A ++ CE ++ + + P F I C+
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKC---CEAFDVVCKGVSPDVYLFTTAINAFCKG 286
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G ++A + + + G +PN +T++ +I G G E +M + + PTL Y
Sbjct: 287 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 346
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
+ L+ L + ++ +A K M P V +Y +L+ +E G+ KA+ + + MVS
Sbjct: 347 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406
Query: 367 EGLKPSTS 374
+GL ++S
Sbjct: 407 KGLSLTSS 414
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 180/361 (49%), Gaps = 4/361 (1%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
Q GF +FNTL++ + K+ I ML+ P+ T ++IS LCK G+++
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
V++LD++ + CSP + +LI + +E ++EE L + + K ++ D ++ ++
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
RN A+ ++EEM +G + F Y I + C GK++EA ++++ME +G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
T+N LI+G KA + E+ ++M + + +N +I LC+ + A +
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+ + +G P++ TY+ L+ + + G+I++ + M P + Y +LIS LC+
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 316 CGKLEEADKYFKI--MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
G++E A K + MK +L P Y ++ K +A++L EM+ + P
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
Query: 374 S 374
+
Sbjct: 646 A 646
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 164/372 (44%), Gaps = 2/372 (0%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A ++ + Q G+ + ++N++I + K + M+ PN T TLIS
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
LCK Q++ ++ + K P V SLI + M L + M K
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D Y++++ + L+ AL + ++M G + + Y T I +C+ K EA +
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
EME G+ T+N LI+G K++R+E++ +QM+ P +N ++ C
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G+ K+A ++ G P+ +TY LI G K G ++ KL ++ K I+ T AY
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV--GIHLEKGNKAKALHLCEEM 364
+I L + K EA F+ M + P + +V G+ G +A+ E+
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVEL 673
Query: 365 VSEGLKPSTSYL 376
+ +G P S L
Sbjct: 674 LEKGFVPEFSSL 685
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 162/350 (46%), Gaps = 10/350 (2%)
Query: 25 SFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDR 83
+F LI + + D + + M++ P+ +++ L G L+ +++
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK----LVEI 175
Query: 84 IHGKRC----SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
H K P V LI + + ++ +++L+ M ++ D ++ ++ +
Sbjct: 176 SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235
Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA-GLKPYD 198
+ +L+ AL + E+M++ G S ++ + +C+ G++E+A +QEM N G P
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295
Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
TFN L+ G KA ++ ++ + M+ P +N +I LC+ G K+A +L
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
+ + SPN +TY+ LI KE +++E +L + K I P + + SLI LC
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
A + F+ M+S P Y L+ KG +AL++ ++M G
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 142/307 (46%), Gaps = 5/307 (1%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E A ++ R L +G + +FN+LI + + + + +++ M P+E T L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
I +LC G+L ++ML ++ C+ VI +LI + + E + M +
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
+++ Y+ ++ K R +E A + ++M+ G + + Y + + +C G I++A
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
++Q M + G +P T+ LI G KA R+E + + + + + A+N +I+ L
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 245 ECGNAKQANGMLTLALDKGFS-PNEITYSHLIGGYAK-EGEIQEVLKLYYEMEYKSISPT 302
+A + L++ + P+ ++Y + G G I+E + E+ K
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF--- 678
Query: 303 LPAYTSL 309
+P ++SL
Sbjct: 679 VPEFSSL 685
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 128/286 (44%), Gaps = 2/286 (0%)
Query: 90 SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
SP + ++LR+ + ++ +L+ M T + +++ + + + L
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 150 VYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
V + M+ G ++ Y + + ++ +M G+KP TFN+LI+
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
+A ++ ++ E M S L+P F +++ E G+ A + ++ G S +
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKS-ISPTLPAYTSLISSLCQCGKLEEADKYFK 327
++ + ++ G+ KEG +++ L EM + P + +L++ LC+ G ++ A +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+M P V Y S++ + G +A+ + ++M++ P+T
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 37/254 (14%)
Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
K FS +Y + G ++ ++++M+++ + TF +LIE A+ + +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 216 ESLSYCEQMM-----------------------SRKLL-------------PSCSAFNEM 239
E LS + M+ S KL+ P S FN +
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195
Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
I+ LC + A ML G P+E T++ ++ GY +EG++ L++ +M
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHS-LVPGVDIYESLVGIHLEKGNKAKAL 358
S + + ++ C+ G++E+A + + M + P + +LV + G+ A+
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 359 HLCEEMVSEGLKPS 372
+ + M+ EG P
Sbjct: 316 EIMDVMLQEGYDPD 329
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 182/361 (50%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
F + D C+ LE G + ++ + N +I+ + + + + +++ P+ T T
Sbjct: 104 FNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNT 163
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI L G++ V ++DR+ C P V+ S++ I + + LL++M +N
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ D YS I+ + + +++A+ +++EM +G ++ Y + + C+ GK +
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L+++M + + P TFN+L++ K +++E+ ++M++R + P+ +N ++
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C +AN ML L + SP+ +T++ LI GY + + +K++ + + +
Sbjct: 344 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
Y+ L+ CQ GK++ A++ F+ M SH ++P V Y L+ + G KAL + E+
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 364 M 364
+
Sbjct: 464 L 464
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 177/357 (49%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+ G ++++N++++ + +S L + + M E + T T+I +LC+ G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+ + + K V+ SL+ + + + +G +LLK M+ + ++ + I +++++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
VK L+ A +Y+EM+ RG S N Y T + YC ++ EAN ++ M
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P TF LI+G KR+++ + + R L+ + ++ +++ C+ G K A +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+ G P+ +TY L+ G G++++ L+++ +++ + + YT++I +C+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
GK+E+A F + + P V Y ++ +KG+ ++A L +M +G P+
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 164/351 (46%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
SL+ F+ + ++ + +LV + + N N T+ +I+ C+ + +L
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P +LI + E ++ E +VL+ RM+ D + Y+ IV +
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
+ AL + +M +R A+ F Y+T I + C G I+ A L +EME G+K T+
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N L+ G KA + + + M+SR+++P+ FN ++ + G ++AN + +
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
+G SPN ITY+ L+ GY + + E + M SP + +TSLI C ++++
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
K F+ + LV Y LV + G A L +EMVS G+ P
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 158/327 (48%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
+ A + + +E +G S++++N+L+ + K+ + + + + M+ PN T L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
+ K G+LQ ++ + + SP +I +L+ + R+ E +L M+R
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
D + ++ ++ ++ ++ + V+ + KRG AN+ Y+ + +C+ GKI+ A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
L QEM + G+ P T+ +L++G ++E++L E + K+ + +I +C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
+ G + A + KG PN +TY+ +I G K+G + E L +ME +P
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKS 331
Y +LI + + G L + K + MKS
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 153/310 (49%), Gaps = 4/310 (1%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
++I+FN L+ V K + +Y+ M+ PN T TL+ C +L +ML
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
D + +CSP ++ TSLI +R+++GM + + + ++ ++ + + YS++V +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
++ A +++EM+ G + Y + C+ GK+E+A + ++++ + + +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
+IEG K ++E++ + + + + P+ + MI LC+ G+ +AN +L +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
G +PN+ TY+ LI + ++G++ KL EM+ S + +I L E
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS----GE 592
Query: 322 ADKYFKIMKS 331
DK F M S
Sbjct: 593 LDKSFLDMLS 602
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 125/269 (46%)
Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
I + + ++ + L + M+R + + +S A + + L +++ G + N
Sbjct: 64 IVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123
Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
+ I +C K A ++ ++ G +P TFN LI+G ++ E++ ++
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
M+ P +N ++ +C G+ A +L ++ + TYS +I ++G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
I + L+ EME K I ++ Y SL+ LC+ GK + K M S +VP V +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
L+ + +++G +A L +EM++ G+ P+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPN 332
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 178/370 (48%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
++AF++ +EQ ++ +NT+I + K D +++ M PN T +L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
IS LC G+ +L + ++ +P V ++LI ++E ++ E L M+++++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
+ YS ++ L+ A ++E M+ + + Y T I +C+Y ++EE
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
+ +EM GL T+N+LI+G +A + + ++M+S + P+ +N ++ LC
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
+ G ++A + P TY+ +I G K G++++ L+ + K + P +
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
AY ++IS C+ G EEAD FK MK +P Y +L+ L G++ + L +EM
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 365 VSEGLKPSTS 374
S G S
Sbjct: 598 RSCGFAGDAS 607
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 174/358 (48%)
Query: 17 RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
+G L+++ +++ + K DL + + M + P T+I LCK +
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 77 YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
+++ + K P V+ +SLI + R + LL M+ + + D +S ++
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
A VK L A +Y+EM+KR + Y++ I +C + +++EA + + M + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
T+N LI+G K KR+EE + +M R L+ + +N +I+ L + G+ A +
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
+ G PN +TY+ L+ G K G++++ + ++ ++ + PT+ Y +I +C+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
GK+E+ F + + P V Y +++ KG+K +A L +EM +G P++
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 179/353 (50%), Gaps = 2/353 (0%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLISALCKGGQLQTYVDM 80
S+I F+ L+ + K ++ D+V + + M +N+ P N T LI+ C+ QL + +
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQM-QNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 81 LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
L ++ P ++ +SL+ +RI E + L+ +M +T+ ++ +++
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
A+ + + M+ +G + Y + C+ G + A L+ +ME L+P
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
+N +I+G K K ++++L+ ++M ++ + P+ ++ +I LC G A+ +L+ +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
++ +P+ T+S LI + KEG++ E KLY EM +SI P++ Y+SLI+ C +L+
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
EA + F+ M S P V Y +L+ + + + + EM GL +T
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 166/372 (44%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M F+V + ++ G + +++ LI+ + + L + M++ PN T
Sbjct: 94 MNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVT 153
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C ++ V ++D++ P + +LI + + E M L+ RM+
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
K D + Y ++V K + + A + +M + +Y T I C+Y ++
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L +EME G++P T++ LI R ++ M+ RK+ P F+ +I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + P+ +TYS LI G+ + E +++ M K
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y +LI C+ ++EE + F+ M LV Y L+ + G+ A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 361 CEEMVSEGLKPS 372
+EMVS+G+ P+
Sbjct: 454 FKEMVSDGVPPN 465
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 165/356 (46%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ + ++FNTLIH + ++ + M+ P+ T +++ LCK G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
++L+++ + P V++ ++I + + + +++ + L K M K + + + YS ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
A + +M++R + + F ++ I A+ + GK+ EA L EM + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T++ LI G R++E+ E M+S+ P +N +I+ C+ ++ +
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+G N +TY+ LI G + G+ +++ EM + P + Y +L+ LC+ G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
KLE+A F+ ++ + P + Y ++ + G L + +G+KP
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 170/367 (46%)
Query: 6 VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
+A V + + G+ ++++ ++L++ S R + M PN T TLI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 66 SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
L + + ++DR+ K C P ++ ++ + + + LL +M + +
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
+ Y+ I+ K ++++ AL +++EM +G N Y++ I C YG+ +A+ L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
+ +M + P TF+ LI+ K ++ E+ ++M+ R + PS ++ +I C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
+A M + K P+ +TY+ LI G+ K ++E ++++ EM + +
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
Y LI L Q G + A + FK M S + P + Y +L+ + G KA+ + E +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 366 SEGLKPS 372
++P+
Sbjct: 494 RSKMEPT 500
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
+L V + + R P +I + L+ I + + + + L ++M + H+ YS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
+++ + L AL V +M+K G+ N ++ + YC +I EA L+ +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
G +P TFN LI G + E+++ ++M+++ P + ++ LC+ G+ A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+L P + Y+ +I G K + + L L+ EME K I P + Y+SLIS
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
LC G+ +A + M + P V + +L+ +++G +A L +EMV + PS
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 124/270 (45%)
Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
+ E ++++ + L M++ I +S ++ A KM + + + E+M G N
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
+ Y+ I +C ++ A ++ +M G +P T + L+ G +KRI E+++ +Q
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
M P+ FN +I L A +A ++ + KG P+ +TY ++ G K G+
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
L +ME + P + Y ++I LC+ +++A FK M++ + P V Y S
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
L+ G + A L +M+ + P
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDV 326
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+R S++++++LI+ DR D ++++ M+ +P+ T TLI CK
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK----- 408
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+R+EEGM + + M ++ ++ +T+ Y++++
Sbjct: 409 ------------------------------YKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
+ + + A +++EM+ G N Y T + C+ GK+E+A + + ++ + ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+N++IEG KA ++E+ + + + P A+N MI C G+ ++A+ +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+ G PN Y+ LI ++G+ + +L EM + + L++++
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD-ASTIGLVTNMLH 617
Query: 316 CGKLEEA 322
G+L+++
Sbjct: 618 DGRLDKS 624
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E +V R + QRG + +++N LI + ++ D+ I++ M+ + PN T TL
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
+ LCK G+L+ + + + + + P + +I + + ++E+G L + K +
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
D +AY+ ++ + + E A +++EM + G NS Y T I A G E +
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 185 LMQEMENAGLKPYDETFNLL 204
L++EM + G T L+
Sbjct: 593 LIKEMRSCGFAGDASTIGLV 612
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 177/363 (48%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
R +AF + + G+ ++F+TLI+ + R + M+E P T+
Sbjct: 121 RKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITL 180
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
L++ LC G++ V ++DR+ P + ++ + + + M LL++M
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
+ + D + YS+I+ K +L++A ++ EM +GF A+ +YTT I +C G+ ++
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
L+++M + P F+ LI+ K ++ E+ ++M+ R + P + +I
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
C+ +AN ML L + KG PN T++ LI GY K I + L+L+ +M + +
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
Y +LI C+ GKLE A + F+ M S + P + Y+ L+ + G KAL +
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 362 EEM 364
E++
Sbjct: 481 EKI 483
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 178/357 (49%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+ GF + +++ ++ V+ KS + L + + M E + +I LCK G L
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
++ + + K +I+ T+LI R ++G LL+ M+++ + D +A+S ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
VK L A +++EM++RG S ++ YT+ I +C+ ++++AN ++ M + G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P TFN+LI G KA I++ L +M R ++ +N +I+ CE G + A +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+ + P+ ++Y L+ G GE ++ L+++ ++E + + Y +I +C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
K+++A F + + P V Y ++G +KG+ ++A L +M +G P+
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 172/369 (46%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
+++ D+C+ +E +G + +L + + +I+ + + L + +++ P+ T T
Sbjct: 88 YDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFST 147
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI+ LC G++ ++++DR+ P +I +L+ + ++ + ++L+ RM+
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ + Y ++ K A+ + +M +R ++ Y+ I C+ G ++ A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L EME G K + LI G A R ++ M+ RK+ P AF+ +I
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
+ G ++A + + +G SP+ +TY+ LI G+ KE ++ + + M K P +
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
+ LI+ C+ +++ + F+ M +V Y +L+ E G A L +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 364 MVSEGLKPS 372
MVS ++P
Sbjct: 448 MVSRRVRPD 456
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 144/306 (47%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AF++ +E +GF +I + TLI + R D ++ + M++ P+ LI
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
K G+L+ ++ + + SP + TSLI +E ++++ +L M+ K
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ +++++ K ++ L ++ +M RG A++ Y T I +CE GK+E A L
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
QEM + ++P ++ +L++G E++L E++ K+ +N +I +C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
A + KG P+ TY+ +IGG K+G + E L+ +ME SP Y
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 307 TSLISS 312
LI +
Sbjct: 566 NILIRA 571
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 138/296 (46%)
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
VD+ + R P +I + L + + ++ + + L K+M K + H+ S+++
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
+ R L A +++K G+ ++ ++T I C G++ EA L+ M G KP
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T N L+ G ++ +++ ++M+ P+ + +++ +C+ G A +L
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
++ + + YS +I G K+G + L+ EME K + YT+LI C G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ ++ K + M + P V + +L+ +++G +A L +EM+ G+ P T
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 161/352 (45%), Gaps = 2/352 (0%)
Query: 23 LISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDML 81
LI F+ L VV ++ + DLV + + M L+ I + N T+ +I+ C+ +L +
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMINCCCRCRKLSLAFSAM 130
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+I P + ++LI + E R+ E + L+ RM+ I + +V
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
+ A+++ + M++ GF N Y + C+ G+ A L+++ME +K +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
+++I+G K ++ + + +M + + +IR C G +L +
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
+ +P+ + +S LI + KEG+++E +L+ EM + ISP YTSLI C+ +L++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
A+ +M S P + + L+ + + L L +M G+ T
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 129/319 (40%), Gaps = 70/319 (21%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R + +R + +++F+ LI K + +++ M++ P+ T +LI CK
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
QL MLD + K C P + LI + I++G+ L ++M + ++ DT+ Y
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA--------- 182
+ ++ ++ LE A +++EM+ R + Y + C+ G+ E+A
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 183 ----------NCLMQEMENA----------------GLKPYDETFNLLIEGCAKAKRIEE 216
N ++ M NA G+KP +T+N++I G
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG--------- 536
Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
LC+ G+ +A+ + + G SPN TY+ LI
Sbjct: 537 --------------------------LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 277 GYAKEGEIQEVLKLYYEME 295
+ EG+ + KL E++
Sbjct: 571 AHLGEGDATKSAKLIEEIK 589
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E A ++ +E+ L + +N +IH + + + D W ++ + P+ T +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 65 ISALCKGGQLQTYVDMLDR 83
I LCK G L + D+L R
Sbjct: 534 IGGLCKKGSL-SEADLLFR 551
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 173/352 (49%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S++ F+ L+ + K ++ DLV + + M N T LI+ C+ QL + +L
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P ++ SL+ RI + + L+ +M+ D+ ++ +++ +
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A+ + + M+ +G + Y + C+ G I+ A L+++ME ++P +
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N +I+ K + ++L+ +M ++ + P+ +N +IR LC G A+ +L+ ++
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
+ +PN +T+S LI + KEG++ E KLY EM +SI P + Y+SLI+ C +L+E
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
A F++M S P V Y +L+ + + + L EM GL +T
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 170/362 (46%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
++A + + +EQ ++ +NT+I + + ++ M PN T +L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
I LC G+ +L + ++ +P V+ ++LI ++E ++ E L M+++++
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
D YS ++ L+ A ++E M+ + N Y T I +C+ +++E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
L +EM GL T+ LI G +A+ + + +QM+S +LP ++ ++ LC
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
G + A + P+ TY+ +I G K G++++ L+ + K + P +
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
YT+++S C+ G EEAD F+ MK +P Y +L+ HL G+KA + L EM
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 365 VS 366
S
Sbjct: 598 RS 599
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 168/367 (45%)
Query: 6 VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
+A V + + G+ +++ N+L++ +R + M+E P+ T TLI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 66 SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
L + + V ++DR+ K C P ++ ++ + + I+ + LLK+M + +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
+ Y+ I+ A +N+ AL ++ EM +G N Y + I C YG+ +A+ L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
+ +M + P TF+ LI+ K ++ E+ ++M+ R + P ++ +I C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
+A M L + K PN +TY+ LI G+ K + E ++L+ EM + +
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
YT+LI Q + + A FK M S ++P + Y L+ G AL + E +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 366 SEGLKPS 372
++P
Sbjct: 494 RSKMEPD 500
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 167/372 (44%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M F++ + ++ G S +L +++ LI+ + + L + M++ P+ T
Sbjct: 94 MNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 153
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C G ++ V ++ ++ P +LI + + R E + L+ RM+
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
K D + Y ++V K +++ AL + ++M + +Y T I A C Y +
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L EM+N G++P T+N LI R ++ M+ RK+ P+ F+ +I
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + P+ TYS LI G+ + E ++ M K
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y +LI C+ +++E + F+ M LV Y +L+ + A +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 361 CEEMVSEGLKPS 372
++MVS+G+ P
Sbjct: 454 FKQMVSDGVLPD 465
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 136/300 (45%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
+L V++ + R P ++ + L+ I + + + + L ++M + H+ YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
+++ + L AL V +M+K G+ + + + +C +I +A L+ +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
G +P TFN LI G + R E+++ ++M+ + P + ++ LC+ G+ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+L P + Y+ +I + + L L+ EM+ K I P + Y SLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
LC G+ +A + M + P V + +L+ +++G +A L +EM+ + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%)
Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
+ + ++++ + L M++ + +S ++ A KM + + + E+M G S N
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
+ Y+ I +C ++ A ++ +M G +P T N L+ G RI +++S Q
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
M+ P FN +I L A +A ++ + KG P+ +TY ++ G K G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
I L L +ME I P + Y ++I +LC + +A F M + + P V Y S
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
L+ G + A L +M+ + P+
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNV 326
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 176/352 (50%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S++ FN L+ V K ++ +LV + + M + T I+ C+ QL + +L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P ++ +SL+ +RI + + L+ +M+ DT ++ +++
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A+ + ++M++RG + Y T + C+ G I+ A L+++ME ++ +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N +I+G K K ++++L+ +M ++ + P ++ +I LC G A+ +L+ ++
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
+ +PN +T+S LI + KEG++ E KLY EM +SI P + Y+SLI+ C +L+E
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
A F++M S P V Y +L+ + + + L EM GL +T
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 177/372 (47%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
++A + + +E+ ++ +NT+I + K D ++ M P+ T +L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
IS LC G+ +L + ++ +P V+ ++LI ++E ++ E L M+++++
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
D YS ++ L+ A ++E M+ + N Y+T I +C+ ++EE
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
L +EM GL T+ LI G +A+ + + +QM+S + P+ +N ++ LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
+ G +A + P+ TY+ +I G K G++++ +L+ + K +SP +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
AY ++IS C+ G EEAD K MK +P Y +L+ L G++ + L +EM
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 365 VSEGLKPSTSYL 376
S G S +
Sbjct: 600 RSCGFAGDASTI 611
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 174/367 (47%)
Query: 6 VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
+A V + + G+ +++ ++L++ S R + M+E P+ T TLI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 66 SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
L + V ++D++ + C P ++ +++ + + I+ + LLK+M + +
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
D + Y+ I+ K ++++ AL ++ EM +G + F Y++ I C YG+ +A+ L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
+ +M + P TF+ LI+ K ++ E+ ++M+ R + P ++ +I C
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
+A M L + K PN +TYS LI G+ K ++E ++L+ EM + +
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV 365
YT+LI Q + A FK M S + P + Y L+ + G AKA+ + E +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 366 SEGLKPS 372
++P
Sbjct: 496 RSTMEPD 502
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 170/372 (45%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M FE+ + ++ G S L +++ I+ + + L + M++ P+ T
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C ++ V ++D++ P T+LI + + E + L+ +M+
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ D + Y +V K +++ AL + ++M K A+ +Y T I C+Y ++
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L EM+N G++P T++ LI R ++ M+ RK+ P+ F+ +I
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + P+ TYS LI G+ + E ++ M K
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y++LI C+ ++EE + F+ M LV Y +L+ + + A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 361 CEEMVSEGLKPS 372
++MVS G+ P+
Sbjct: 456 FKQMVSVGVHPN 467
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 141/301 (46%), Gaps = 2/301 (0%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
++ VD+ + R P ++ L+ + + + E + L ++M + HD YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
+ + + L AL V +M+K G+ + ++ + YC +I +A L+ +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
G KP TF LI G + E+++ +QM+ R P + ++ LC+ G+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
+L ++KG + + Y+ +I G K + + L L+ EM+ K I P + Y+SLIS
Sbjct: 243 LSLLK-KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
LC G+ +A + M + P V + +L+ +++G +A L +EM+ + P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 372 S 372
Sbjct: 362 D 362
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 117/275 (42%), Gaps = 35/275 (12%)
Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
++++ + L M++ + ++ ++ A KM E + + E+M G S + + Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
FI +C ++ A ++ +M G +P T + L+ G +KRI ++++ +QM+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
P F +I L A +A ++ + +G P+ +TY ++ G K G+I
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
L L +ME I + Y ++I LC+ +++A
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA------------------------- 277
Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
L+L EM ++G++P S +C
Sbjct: 278 ----------LNLFTEMDNKGIRPDVFTYSSLISC 302
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 163/349 (46%), Gaps = 5/349 (1%)
Query: 25 SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
+FN +I + K DR + ++ ML P++ T L++ LCK G++ D+ RI
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 85 HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIHDTIAYSLIVYAKVKMRN 143
P +++ +LI + R+++ +L M+ ++ D Y+ ++Y K
Sbjct: 349 P----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
+ AL V +M +G N + YT + +C+ GKI+EA ++ EM GLKP FN
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
LI K RI E++ +M + P FN +I LCE K A +L + +G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
N +TY+ LI + + GEI+E KL EM ++ Y SLI LC+ G++++A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
F+ M P L+ G +A+ +EMV G P
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPD 633
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 166/351 (47%), Gaps = 1/351 (0%)
Query: 23 LISFNTLIHVVTKSDRNDLVWRIYQHMLENIR-YPNEATIRTLISALCKGGQLQTYVDML 81
++ FNTLIH R D + M+ + P+ T +LI K G + +++L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+ K C P V T L+ + +I+E +L M + +T+ ++ ++ A K
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
+ A+ ++ EM ++G + + + + I CE +I+ A L+++M + G+ T+
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N LI + I+E+ +M+ + +N +I+ LC G +A + L
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
G +P+ I+ + LI G + G ++E ++ EM + +P + + SLI+ LC+ G++E+
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
F+ +++ + P + +L+ + G A L +E + +G P+
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 124 bits (312), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 150/306 (49%), Gaps = 2/306 (0%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G + ++N+LI+ K L + M PN + L+ CK G++
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
++L+ + P + LI +E RI E + + + M RK D ++ ++
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
++ ++ AL + +M+ G AN+ Y T I A+ G+I+EA L+ EM G P
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPL 562
Query: 198 DE-TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
DE T+N LI+G +A ++++ S E+M+ PS + N +I LC G ++A
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
+ +G +P+ +T++ LI G + G I++ L ++ +++ + I P + +L+S LC+
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Query: 317 GKLEEA 322
G + +A
Sbjct: 683 GFVYDA 688
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 168/365 (46%), Gaps = 5/365 (1%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
+VA +V + R +L +F ++ + D + + M ++ PN +TL
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
I +L K ++ + +L+ + C P +IL + + +RI E ++ RML +
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
D I Y ++ K+ +++A +++ R ++ T I + +G++++A
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 185 LMQEMENA-GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
++ +M + G+ P T+N LI G K + +L M ++ P+ ++ ++
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C+ G +A +L G PN + ++ LI + KE I E ++++ EM K P +
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
+ SLIS LC+ +++ A + M S +V Y +L+ L +G +A L E
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 364 MVSEG 368
MV +G
Sbjct: 555 MVFQG 559
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 5/350 (1%)
Query: 25 SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
S+N ++ ++ + + + ++ ML P T ++ A C ++ + + +L +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 85 HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
C P ++ +LI + + R+ E + LL+ M + D ++ ++ K +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
A + ML RGF+ + Y + C+ G+++ A L + KP FN L
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359
Query: 205 IEGCAKAKRIEESLSYCEQMM-SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
I G R++++ + M+ S ++P +N +I + G A +L +KG
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
PN +Y+ L+ G+ K G+I E + EM + P + LIS+ C+ ++ EA
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ F+ M P V + SL+ E AL L +M+SEG+ +T
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 145/311 (46%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
L +A +V + +G ++ S+ L+ K + D + + M + PN
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
LISA CK ++ V++ + K C P V SLI + + + I+ + LL+ M+ +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
++ +T+ Y+ ++ A ++ ++ A + EM+ +G + Y + I C G++++A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
L ++M G P + + N+LI G ++ +EE++ + ++M+ R P FN +I
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
LC G + M +G P+ +T++ L+ K G + + L E P
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 303 LPAYTSLISSL 313
++ L+ S+
Sbjct: 704 HRTWSILLQSI 714
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 171/352 (48%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S++ FN L+ V K ++ +LV + + M + T I+ C+ QL + +L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P ++ +SL+ +RI + + L+ +M+ DT ++ +++
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A+ + ++M++RG + Y T + C+ G I+ A L+ +ME A +K F
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N +I+ K + +E ++ +M ++ + P+ +N +I LC G A+ +L+ L+
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
K +PN +T++ LI + KEG++ E KL+ EM +SI P Y LI+ C +L+E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
A + FK M S +P + Y +L+ + + L EM GL +T
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 167/367 (45%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M FE+ + ++ G S L +++ I+ + + L + M++ P+ T
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C ++ V ++D++ P T+LI + + E + L+ +M+
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ D + Y +V K +++ AL + +M AN ++ T I + C+Y +E
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
A L EME G++P T+N LI R ++ M+ +K+ P+ FN +I
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + P+ ITY+ LI G+ + E +++ M K
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y +LI+ C+C ++E+ + F+ M LV Y +++ + G+ A +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 361 CEEMVSE 367
++MVS
Sbjct: 456 FKQMVSN 462
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 172/372 (46%), Gaps = 3/372 (0%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
++A ++ +E +++ FNT+I + K ++ ++ M PN T +L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
I+ LC G+ +L + K+ +P V+ +LI +E ++ E L + M+++++
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
DTI Y+L++ L+ A +++ M+ + N Y T I +C+ ++E+
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
L +EM GL T+ +I+G +A + + +QM+S ++ ++ ++ LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
G A + N Y+ +I G K G++ E L+ + SI P +
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVV 536
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
Y ++IS LC L+EAD F+ MK +P Y +L+ +L ++A + L +EM
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Query: 365 VSEGLKPSTSYL 376
S G S +
Sbjct: 597 RSSGFVGDASTI 608
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 160/355 (45%), Gaps = 3/355 (0%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ +F TLIH + ++ + M++ P+ T T+++ LCK G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+++L+++ R V++ ++I + + +E + L M K + + + Y+ ++
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
A + ML++ + N + I A+ + GK+ EA L +EM + P
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T+NLLI G R++E+ + M+S+ LP+ +N +I C+C + +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+G N +TY+ +I G+ + G+ ++ +M + + Y+ L+ LC G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
KL+ A FK ++ + + IY +++ + G +A L S +KP
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPD 534
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 157/342 (45%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
+A V + + G+ +++ ++L++ S R + M+E P+ T T
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI L + V ++D++ + C P ++ +++ + + I+ + LL +M
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ + + ++ I+ + K R++E A+ ++ EM +G N Y + I C YG+ +A+
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L+ M + P TFN LI+ K ++ E+ E+M+ R + P +N +I
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C +A M + K PN TY+ LI G+ K +++ ++L+ EM + +
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
YT++I Q G + A FK M S+ + + Y L+
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 135/301 (44%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
++ VD+ + R P ++ L+ + + + E + L ++M + HD YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
+ + + L AL V +M+K G+ + ++ + YC +I +A L+ +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
G KP TF LI G + E+++ +QM+ R P + ++ LC+ G+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+L N + ++ +I K ++ + L+ EME K I P + Y SLI+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
LC G+ +A + M + P V + +L+ ++G +A L EEM+ + P
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 373 T 373
T
Sbjct: 363 T 363
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 6/358 (1%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
R EVA D+ +E +G +++++N+LI+ + R R+ +MLE PN T
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
LI A K G+L + + + + P I LI R++E + K M+
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
K+ + + Y+ ++ K + +E + ++ EM +RG N+ YTT I + + G +
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
A + ++M + + T+++L+ G +++ +L + + ++ + +N MI
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
+C+ G +A L P+ +TY+ +I G + +QE L+ +M+ P
Sbjct: 512 GMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 302 TLPAYTSLI-SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
Y +LI ++L C + A+ K M+S V SLV L G K+
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAE-LIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 167/357 (46%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
RG ++++N++I + K+ D + M++N P+ T +++ C GQ +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 283
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+ L ++ P V+ + L+ + + R E + M ++ + + Y ++
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLL 343
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
L + + M++ G + +V++ I AY + GK+++A + +M GL
Sbjct: 344 QGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 403
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+ +I K+ R+E+++ Y EQM+ L P +N +I LC C ++A +
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+ LD+G N I ++ +I + KEG + E KL+ M + P + Y +LI+ C
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523
Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
GK++EA K M S L P Y +L+ + + AL L +EM S G+ P
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 182/379 (48%), Gaps = 4/379 (1%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDR-NDLVWRIYQHMLENIRYPNEATIR 62
++ F + ++GF + I+F L+ + R +D + + + M E PN +
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162
Query: 63 TLISALCKGGQLQTYVDMLDRI---HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
L+ LC + Q +++L + G P V+ T++I +E ++ M
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
L + ++ D + Y+ I+ A K + ++ A+ V M+K G + Y + + YC G+
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
+EA +++M + G++P T++LL++ K R E+ + M R L P + + +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSI 299
++ G + +G+L L + G P+ +S LI YAK+G++ + + ++ +M + +
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 300 SPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
+P Y ++I LC+ G++E+A YF+ M L PG +Y SL+ +A
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462
Query: 360 LCEEMVSEGLKPSTSYLCS 378
L EM+ G+ +T + S
Sbjct: 463 LILEMLDRGICLNTIFFNS 481
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 167/356 (46%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G ++S+ T+I+ K +D + Y ML+ P+ T ++I+ALCK +
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+++L+ + P + S++ + +E + LK+M + D + YSL++
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
K A +++ M KRG Y T + Y G + E + L+ M G+ P
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
F++LI AK ++++++ +M + L P+ + +I LC+ G + A
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+D+G SP I Y+ LI G + + +L EM + I + S+I S C+ G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
++ E++K F++M + P V Y +L+ + G +A+ L MVS GLKP+T
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 162/338 (47%), Gaps = 6/338 (1%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A +V + + G +++N+++H S + + M + P+ T L+
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
LCK G+ + D + + P + +L+ + + E LL M+R +
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D +S+++ A K ++ A++V+ +M ++G + N+ Y IG C+ G++E+A
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 187 QEMENAGLKPYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
++M + GL P + +N LI G C K +R EE + +M+ R + + FN +I
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL---EMLDRGICLNTIFFNSIIDSH 486
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C+ G ++ + L + G PN ITY+ LI GY G++ E +KL M + P
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNT 546
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
Y++LI+ C+ ++E+A FK M+S + P + Y
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 4/325 (1%)
Query: 26 FNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIH 85
F+ LI K + D ++ M + PN T +I LCK G+++ + +++
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 86 GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLE 145
+ SP IV SLI + + E L+ ML + + +TI ++ I+ + K +
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 146 SALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
+ ++E M++ G N Y T I YC GK++EA L+ M + GLKP T++ LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
G K R+E++L ++M S + P +N +++ L + A + + G
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
TY+ ++ G K + L+++ + + + +I +L + G+ +EA
Sbjct: 614 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 673
Query: 326 FKIMKSHSLVPGVDIY----ESLVG 346
F S+ LVP Y E+++G
Sbjct: 674 FVAFSSNGLVPNYWTYRLMAENIIG 698
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 169/411 (41%), Gaps = 43/411 (10%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE---NIRYPNEATI 61
E A V L +RG S+ N + V + V R Y M + P+ T
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM-------- 113
LI C+ G+L L + K I T L+ + ++R + M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 114 ------------VLLKRMLRKN-------MIH------------DTIAYSLIVYAKVKMR 142
+LLK + +N ++H D ++Y+ ++ K
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 143 NLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFN 202
+ + A Y EML RG + Y + I A C+ +++A ++ M G+ P T+N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 203 LLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDK 262
++ G + + +E++ + ++M S + P ++ ++ LC+ G +A + +
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 263 GFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEA 322
G P TY L+ GYA +G + E+ L M I P ++ LI + + GK+++A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
F M+ L P Y +++GI + G A+ E+M+ EGL P
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 158/359 (44%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+ +RG + ++ TL+ + + M+ N +P+ LI A K G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ + + ++ + +P + ++I + + R+E+ M+ ++M+ + + I Y+
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
+++ E A + EML RG N+ + + I ++C+ G++ E+ L + M G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
+KP T+N LI G A +++E++ M+S L P+ ++ +I C+ + A
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
+ G SP+ ITY+ ++ G + +LY + L Y ++ L
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
C+ ++A + F+ + L + ++ L+ G +A L S GL P+
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 141/327 (43%), Gaps = 9/327 (2%)
Query: 9 DVCRYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
D Y EQ G S I +N+LIH + ++ + + ML+ N ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 66 SALCKGGQL---QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
+ CK G++ + +++ RI K P VI +LI +++E M LL M+
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVK---PNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
+ +T+ YS ++ K+ +E ALV+++EM G S + Y + + + A
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
L + +G + T+N+++ G K K +++L + + L FN MI
Sbjct: 601 KELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDA 660
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
L + G +A + G PN TY + +G ++E+ +L+ ME +
Sbjct: 661 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 720
Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIM 329
++ L Q G++ A Y ++
Sbjct: 721 SGMLNFIVRELLQRGEITRAGTYLSMI 747
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 3/307 (0%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
RG L+ I FN++I K R ++++ M+ PN T TLI+ C G++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+ +L + P + ++LI + R+E+ +VL K M + D I Y++I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
+ R +A +Y + + G Y + C+ ++A + Q + LK
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
TFN++I+ K R +E+ S L+P+ + M + G ++ + +
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYT-SLISSLC 314
D G + + + ++ + GEI ++ K S L A T SL L
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS--LEASTASLFIDLL 766
Query: 315 QCGKLEE 321
GK +E
Sbjct: 767 SGGKYQE 773
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 172/359 (47%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
QRG +L+++ +++ + K DL + + M N T+I +LCK
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+++ + K P VI +SLI + ER + LL M+ + + + + ++ ++
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
A VK L A +Y+EM+KR + F Y++ I +C + +++EA + + M +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+N LI G KAKRI+E + +M R L+ + + +I + + A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+ G PN +TY+ L+ G K G++++ + ++ ++ + PT+ Y +I +C+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
GK+E+ F + + P V IY +++ KG K +A L +M +G P +
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 172/352 (48%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S+ FN L+ + K + DLV + + M N T LI+ C+ Q+ + +L
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P ++ +SL+ +RI + + L+ +M+ DTI ++ +++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A+ + + M++RG N Y + C+ G I+ A L+ +ME A ++ +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
+ +I+ K + +++L+ +M ++ + P+ ++ +I LC A+ +L+ ++
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
+ +PN +T++ LI + KEG++ E KLY EM +SI P + Y+SLI+ C +L+E
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
A F++M S P V Y +L+ + + + L EM GL +T
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 177/372 (47%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M+ F++ + +++ G S +L ++N LI+ + + L + M++ P+ T
Sbjct: 98 MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C G ++ V ++D++ P I T+LI + + E + L+ RM+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ + + Y ++V K +++ A + +M AN +Y+T I + C+Y +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L EMEN G++P T++ LI +R ++ M+ RK+ P+ FN +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + P+ TYS LI G+ + E ++ M K
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y +LI+ C+ +++E + F+ M LV Y +L+ + + A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 361 CEEMVSEGLKPS 372
++MVS+G+ P+
Sbjct: 458 FKQMVSDGVHPN 469
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ S+++ ++L++ R + M+E P+ T TLI L +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
V ++DR+ + C P ++ ++ + + I+ LL +M + + + YS ++ +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
K R+ + AL ++ EM +G N Y++ I C Y + +A+ L+ +M + P
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
TFN LI+ K ++ E+ ++M+ R + P ++ +I C +A M
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
L + K PN +TY+ LI G+ K I E ++L+ EM + + YT+LI Q
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
+ A FK M S + P + Y +L+ + G KA+ + E + ++P+
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 504
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 156/332 (46%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
++AF++ +E +++ ++T+I + K D ++ M PN T +L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
IS LC + +L + ++ +P V+ +LI ++E ++ E L M+++++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
D YS ++ L+ A ++E M+ + N Y T I +C+ +I+E
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
L +EM GL T+ LI G +A+ + + +QM+S + P+ +N ++ LC
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
+ G ++A + P TY+ +I G K G++++ L+ + K + P +
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
Y ++IS C+ G EEAD F+ M+ +P
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 159/358 (44%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+ G+ I+F TLIH + ++ + M++ PN T +++ LCK G +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
++L+++ + V++ +++I + + ++ + L M K + + I YS ++
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
A + +M++R + N + I A+ + GK+ EA L EM +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T++ LI G R++E+ E M+S+ P+ +N +I C+ + +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+G N +TY+ LI G+ + + ++ +M + P + Y +L+ LC+
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
GKLE+A F+ ++ + P + Y ++ + G L + +G+KP
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 4 FEVAFDVCRYLE---QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
+E D R L +R + ++++FN LI K + ++Y M++ P+ T
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+LI+ C +L M + + K C P V+ +LI + +RI+EG+ L + M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ ++ +T+ Y+ +++ + R+ ++A +V+++M+ G N Y T + C+ GK+E
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A + + ++ + ++P T+N++IEG KA ++E+ + + + P +N MI
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEIT 270
C G ++A+ + + G P+ T
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 131/285 (45%)
Query: 88 RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
R P + L+ I + ++ + + L ++M R + H+ Y++++ + + A
Sbjct: 80 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 139
Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
L + +M+K G+ + ++ + YC +I +A L+ +M G +P TF LI G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
+ E+++ ++M+ R P+ + ++ LC+ G+ A +L N
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
+ YS +I K + L L+ EME K + P + Y+SLIS LC + +A +
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
M + P V + +L+ +++G +A L +EM+ + P
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 119/275 (43%), Gaps = 35/275 (12%)
Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
++++ + L M++ + ++ ++ A KM+ + + + E+M + G S N + Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
I +C +I A L+ +M G +P T + L+ G KRI ++++ +QM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM--- 181
Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
++ G+ P+ IT++ LI G + E
Sbjct: 182 --------------------------------VEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
+ L M + P L Y +++ LC+ G ++ A M++ + V IY +++
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 348 HLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
+ ++ AL+L EM ++G++P+ S +C
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 171/352 (48%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S+ FN L+ + K + DLV + + M N T LI+ C+ Q+ + +L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P ++ +SL+ +RI + + L+ +M+ DTI ++ +++
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A+ + + M++RG N Y + C+ G I+ A L+ +ME A ++ F
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N +I+ K + ++++L+ ++M ++ + P+ ++ +I LC G A+ +L+ ++
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
K +PN +T++ LI + KEG+ E KL+ +M +SI P + Y SLI+ C +L++
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
A + F+ M S P +D Y +L+ + L EM GL T
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 175/372 (47%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M+ F++ + +++ G S +L ++N LI+ + + L + M++ P+ T
Sbjct: 23 MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 82
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C G ++ V ++D++ P I T+LI + + E + L+ RM+
Sbjct: 83 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 142
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ + + Y ++V K +++ A + +M A+ ++ T I + C+Y ++
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L +EME G++P T++ LI R ++ M+ +K+ P+ FN +I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + P+ TY+ LI G+ + + +++ M K
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P L Y +LI C+ ++E+ + F+ M LV Y +L+ G+ A +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 361 CEEMVSEGLKPS 372
++MVS+G+ P
Sbjct: 383 FKQMVSDGVPPD 394
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 161/353 (45%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ S+++ ++L++ R + M+E P+ T TLI L +
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
V ++DR+ + C P ++ ++ + + I+ LL +M + D + ++ I+ +
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
K R+++ AL +++EM +G N Y++ I C YG+ +A+ L+ +M + P
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
TFN LI+ K + E+ + M+ R + P +N +I C +A M
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+ K P+ TY+ LI G+ K +++ +L+ EM ++ + YT+LI L G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
+ A K FK M S + P + Y L+ G KAL + + M +K
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 170/386 (44%), Gaps = 35/386 (9%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
QRG +L+++ +++ + K DL + + M + T+I +LCK +
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+++ + K P V+ +SLI + R + LL M+ K + + + ++ ++
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
A VK A ++++M+KR + F Y + I +C + ++++A + + M +
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P +T+N LI+G K+KR+E+ +M R L+ + +I+ L G+ A +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
+ G P+ +TYS L+ G G++++ L+++ M+
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
K + P + Y ++IS LC L+EA K MK +P
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 341 YESLVGIHLEKGNKAKALHLCEEMVS 366
Y +L+ HL G+KA + L EM S
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRS 528
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 161/358 (44%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+ G+ I+F TLIH + ++ + M++ PN T +++ LCK G +
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
++L+++ + V++ ++I + + +++ + L K M K + + + YS ++
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
A + +M+++ + N + I A+ + GK EA L +M +
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+N LI G R++++ E M+S+ P +N +I+ C+ + +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+G + +TY+ LI G +G+ K++ +M + P + Y+ L+ LC
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
GKLE+A + F M+ + + IY +++ + G L + +G+KP+
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%)
Query: 119 MLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK 178
M++ + ++ ++ A KM+ + + + E+M + G S N + Y I +C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 179 IEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
I A L+ +M G +P T + L+ G KRI ++++ +QM+ P F
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
+I L A +A ++ + +G PN +TY ++ G K G+I L +ME
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
I + + ++I SLC+ +++A FK M++ + P V Y SL+ G + A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 359 HLCEEMVSEGLKPS 372
L +M+ + + P+
Sbjct: 241 QLLSDMIEKKINPN 254
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 133/285 (46%)
Query: 88 RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
R P + L+ I + ++ + + L ++M R + H+ Y++++ + + A
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
L + +M+K G+ + ++ + YC +I +A L+ +M G +P TF LI G
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
+ E+++ ++M+ R P+ + ++ LC+ G+ A +L +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
+ ++ +I K + + L L+ EME K I P + Y+SLIS LC G+ +A +
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
M + P + + +L+ +++G +A L ++M+ + P
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (42%)
Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
P+ ++ L+ AK + V+ L +M+ IS L Y LI+ C+ ++ A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
M P + SL+ + + A+ L ++MV G +P T
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 115
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 163/349 (46%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S+ +N LI + K R + +++ ML P+ T TLI CK G + +
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+R+ P +I +L+ + + +E+ +LK M + D +S++
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
E+AL VYE + G N++ + + A C+ GKIE+A ++ GL P + +
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N +I+G + + + E M + + P A+N +IRR CE G + A +
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
KG SP+ TY+ LIGGY ++ E + + EME P + +Y +LI+ LC+ KL E
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
A + M+ + P V IY L+ KG A +EM+ +G++
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 189/408 (46%), Gaps = 41/408 (10%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
+ E A +V + ++ GF +F+ L + +++ + +Y+ +++ N T
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
L++ALCK G+++ ++L R K P ++ ++I ++ + + ++ M ++
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 123 NMIHDTIAYSLIV---------------YAKVKMRNLESALVVY---------------- 151
M D +AY+ ++ K+K++ + ++ Y
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 152 ----EEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
+EM G N Y T I C+ K+ EA + ++ME+ G+ P +N+LI+G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
C +IE++ + ++M+ + + + +N +I L G +A +L KG P+
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
TY+ LI GY G +Q + LY EM+ I PTL Y LI SLC +E ++ F
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFG 657
Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMV--SEGLKPST 373
M SL P + +Y ++ + G+ KA +L ++M+ S GL +T
Sbjct: 658 EM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 171/375 (45%), Gaps = 14/375 (3%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E +F V ++ SLI+FNTL+ + K+ + + + M + P+ T L
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
Query: 65 ISALCKG-------GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLK 117
G +T VD +++ CS +++N + +E +IE+ +L
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS--ILLNA-----LCKEGKIEKAEEILG 378
Query: 118 RMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
R + K ++ + + Y+ ++ + +L A + E M K+G + Y I +CE G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
++E A + +M+ G+ P ET+N+LI G + ++ ++M +P+ ++
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
+I LC+ +A + D+G SP Y+ LI G +G+I++ + EM K
Sbjct: 499 TLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
I L Y +LI L GKL EA+ + L P V Y SL+ + GN +
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 358 LHLCEEMVSEGLKPS 372
+ L EEM G+KP+
Sbjct: 619 IALYEEMKRSGIKPT 633
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 170/372 (45%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
++ A D+ L G S S L+ + K+ + + ++ ++LE+ P++
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
I A K + +++ +R+ R P V + LI + + +R+ + L ML
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
+ ++ I Y+ ++ K N E + V E M + + T + + G +E+
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
A +++EM++ G P TF++L +G + ++ E +L E + + + + ++
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
LC+ G ++A +L + KG PNE+ Y+ +I GY ++G++ ME + + P
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
AY LI C+ G++E A+K MK + P V+ Y L+G + K K +
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 362 EEMVSEGLKPST 373
+EM G P+
Sbjct: 483 KEMEDNGTMPNV 494
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 146/353 (41%), Gaps = 39/353 (11%)
Query: 17 RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
+G S S+ ++N LI + D + I + M +N PN + TLI+ LCKG +L
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 77 YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
+ + + SP V + LI + +IE+ K ML+K + + + Y+ ++
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
L A + E+ ++G + F Y + I Y G ++ L +EM+ +G+KP
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
+T++LLI C K E + E++ F EM
Sbjct: 633 TLKTYHLLISLCTK-----EGIELTERL-----------FGEM----------------- 659
Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
P+ + Y+ ++ YA G++++ L +M KSI Y SLI +
Sbjct: 660 ------SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
GKL E M + + P D Y +V H E + A EM +G
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 41/313 (13%)
Query: 99 LILRIIQEER--IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLK 156
L+L ++ E I E L + + + + + +L++ VK + + V+ +L+
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
F + F+Y I A + + + L M++ + P +N+LI+G K KR+ +
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232
Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ------------------------- 251
+ ++M++R+LLPS +N +I C+ GN ++
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 252 ----------ANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
A +L D GF P+ T+S L GY+ + + L +Y +
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK- 351
Query: 302 TLPAYTS--LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH 359
+ AYT L+++LC+ GK+E+A++ + LVP IY +++ + KG+ A
Sbjct: 352 -MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 360 LCEEMVSEGLKPS 372
E M +G+KP
Sbjct: 411 KIEAMEKQGMKPD 423
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 4/285 (1%)
Query: 10 VCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALC 69
V R +E RG S + +N LI + + +R + ML+ N T TLI L
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 70 KGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTI 129
G+L D+L I K P V SLI ++ + L + M R +
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635
Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
Y L++ K +E ++ EM + VY + Y +G +E+A L ++M
Sbjct: 636 TYHLLISLCTK-EGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
+ T+N LI G K ++ E S ++M +R++ P +N +++ CE +
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDY 751
Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
A +KGF + + L+ G +E +E + EM
Sbjct: 752 MSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTK----SDRNDLVWRIYQHMLENIRYPNEAT 60
E AF + + ++G L+L+++NTLI ++ S+ DL+ I + L+ P+ T
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK----PDVFT 601
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+LIS G +Q + + + + P + L++ + +E IE L M
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKP-TLKTYHLLISLCTKEGIELTERLFGEM- 659
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ D + Y+ +++ ++E A + ++M+++ + Y + I + GK+
Sbjct: 660 --SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
E L+ EM ++P +T+N++++G + K + + +M + L NE++
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777
Query: 241 RRLCECGNAKQA 252
L E +K+A
Sbjct: 778 SGLKEEWRSKEA 789
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 51/270 (18%)
Query: 103 IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSAN 162
++Q+ RIE +L +LR D+ ++ + L SA + LK FS
Sbjct: 65 LLQQNRIETARGVLSSLLR----SDSTPFA-------SPKELFSAFSLSSPSLKHDFS-- 111
Query: 163 SFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCE 222
Y E I EA L + N G+ P ++ LL++ K K+ ++
Sbjct: 112 ---YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTI---- 164
Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
N L + L+ F P++ Y I K
Sbjct: 165 ------------------------------NVFLNI-LESDFRPSKFMYGKAIQAAVKLS 193
Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
++ + L+L+ M++ I P++ Y LI LC+ ++ +A++ F M + L+P + Y
Sbjct: 194 DVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253
Query: 343 SLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
+L+ + + GN K+ + E M ++ ++PS
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 176/369 (47%), Gaps = 7/369 (1%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A ++ + +E+ G ++ ++ LI + + + + MLE PN T LI+
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQ---EERIEEGMVLLKRMLRKN 123
CK G ++ VD+++ + ++ SP NT +I+ + + + M +L +ML +
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSP----NTRTYNELIKGYCKSNVHKAMGVLNKMLERK 457
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
++ D + Y+ ++ + + N +SA + M RG + + YT+ I + C+ ++EEA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L +E G+ P + LI+G KA +++E+ E+M+S+ LP+ FN +I L
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C G K+A + + G P T + LI K+G+ + +M P
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
YT+ I + C+ G+L +A+ M+ + + P + Y SL+ + + G A + +
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 364 MVSEGLKPS 372
M G +PS
Sbjct: 698 MRDTGCEPS 706
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 186/407 (45%), Gaps = 41/407 (10%)
Query: 7 AFDVCRYLEQR-----GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
D+CR + + + L + +NTL++ + + D + ++Y MLE+ PN T
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
+++ CK G ++ + +I P TSLI+ Q + ++ + M
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 122 KNMIHDTIAYSLIVYAK-------------VKMRNLE----------------------S 146
K + +AY+ +++ VKM++ E
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
AL + +EM + G N YT I + C K E+A L+ +M GL P T+N LI
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 207 GCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSP 266
G K IE+++ E M SRKL P+ +NE+I+ C+ N +A G+L L++ P
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLP 460
Query: 267 NEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYF 326
+ +TY+ LI G + G +L M + + P YTS+I SLC+ ++EEA F
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 327 KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
++ + P V +Y +L+ + + G +A + E+M+S+ P++
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 1/370 (0%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
+ AF V + +G + +++ LIH + + R D ++ M ++ +P T
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI +LC + ++++ + P + T LI + + + E+ LL +ML K
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
++ + I Y+ ++ K +E A+ V E M R S N+ Y I YC+ + +A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAM 447
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
++ +M + P T+N LI+G ++ + + M R L+P + MI L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C+ ++A + KG +PN + Y+ LI GY K G++ E + +M K+ P
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
+ +LI LC GKL+EA + M L P V L+ L+ G+ A ++
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 364 MVSEGLKPST 373
M+S G KP
Sbjct: 628 MLSSGTKPDA 637
Score = 128 bits (321), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 165/389 (42%), Gaps = 20/389 (5%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
+ E A DV +E R S + ++N LI KS+ + + + MLE P+ T
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYN 466
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
+LI C+ G + +L ++ + P TS+I + + +R+EE L + +K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
+ + + Y+ ++ K ++ A ++ E+ML + NS + I C GK++EA
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
L ++M GL+P T +LI K + + S +QM+S P + I+
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
C G A M+ + G SP+ TYS LI GY G+ + M P+
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 303 LPAYTSLI---------------SSLCQCGKLEEADKYFKI---MKSHSLVPGVDIYESL 344
+ SLI LC + E D ++ M HS+ P YE L
Sbjct: 707 QHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKL 766
Query: 345 VGIHLEKGNKAKALHLCEEMV-SEGLKPS 372
+ E GN A + + M +EG+ PS
Sbjct: 767 ILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 19/312 (6%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G ++ + LIH + K D + +Q ML + P+ T T I C+ G+L
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML------RKNMIHDTIAY 131
DM+ ++ SP + +SLI + +LKRM ++ I +
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 132 SL-IVYAKVK-----------MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
L + Y K K M ++ + + E+M++ + N+ Y I CE G +
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 180 EEANCLMQEME-NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNE 238
A + M+ N G+ P + FN L+ C K K+ E+ + M+ LP +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 239 MIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
+I L + G ++ + L G+ +E+ + +I G K+G ++ +L+ ME
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Query: 299 ISPTLPAYTSLI 310
+ Y+ LI
Sbjct: 897 CKFSSQTYSLLI 908
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 178/369 (48%), Gaps = 2/369 (0%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ S+++ N+L++ +R + M+E P+ T TL+ L + +
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
V +++R+ K C P ++ ++I + + + + LL +M + + D + YS ++ +
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
K R+++ AL ++ EM +G + F Y++ I C YG+ +A+ L+ +M + P
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
TFN LI+ AK ++ E+ ++M+ R + P+ +N +I C +A + T
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
L + K P+ +TY+ LI G+ K ++ + ++L+ +M + + YT+LI Q
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS--TSY 375
+ A FK M S + P + Y +L+ + G KA+ + E + ++P T
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 376 LCSASTCRG 384
+ S C+
Sbjct: 490 IMSEGMCKA 498
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 176/372 (47%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M+ F++ +E G S +L ++N +I+ + + + I M++ P+ T
Sbjct: 78 MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVT 137
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C G ++ V ++D++ P + T+L+ + Q + E + L++RM+
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
K D + Y ++ K + AL + +M K A+ +Y+T I + C+Y ++
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD 257
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L EM+N G++P T++ LI R ++ M+ RK+ P+ FN +I
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + PN +TY+ LI G+ + E +++ M K
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y +LI+ C+ K+ + + F+ M LV Y +L+ + + A +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 361 CEEMVSEGLKPS 372
++MVS+G+ P+
Sbjct: 438 FKQMVSDGVHPN 449
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 171/352 (48%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S++ F+ L+ + K + DLV + M N T +I+ LC+ QL + +L
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P ++ SL+ RI E + L+ +M+ DT+ ++ +V+ +
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A+ + E M+ +G + Y I C+ G+ + A L+ +ME ++ +
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
+ +I+ K + ++++L+ +M ++ + P ++ +I LC G A+ +L+ L+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
+ +PN +T++ LI +AKEG++ E KL+ EM +SI P + Y SLI+ C +L+E
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
A + F +M S +P V Y +L+ + + L +M GL +T
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Score = 128 bits (321), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 168/362 (46%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
++A ++ +E+ ++ ++T+I + K D ++ M P+ T +L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
IS LC G+ +L + ++ +P V+ SLI +E ++ E L M+++++
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
+ + Y+ ++ L+ A ++ M+ + + Y T I +C+ K+ +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
L ++M GL T+ LI G +A + + +QM+S + P+ +N ++ LC
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
+ G ++A + P+ TY+ + G K G++++ L+ + K + P +
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
AY ++IS C+ G EEA F MK +P Y +L+ HL G+KA + L +EM
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 365 VS 366
S
Sbjct: 582 RS 583
Score = 112 bits (279), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 141/301 (46%), Gaps = 2/301 (0%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
+L VD+ + R P ++ + L+ I + ++ + + ++M + H+ Y+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
+++ + L AL + +M+K G+ + + + +C +I EA L+ +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
G +P TF L+ G + + E+++ E+M+ + P + +I LC+ G A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 253 NGMLTLALDKG-FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLIS 311
+L ++KG + + YS +I K + + L L+ EM+ K I P + Y+SLIS
Sbjct: 225 LNLLN-KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
LC G+ +A + M + P V + SL+ ++G +A L +EM+ + P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 372 S 372
+
Sbjct: 344 N 344
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 109/239 (45%)
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
L+ A+ ++ EM+K + ++ + A + K + ++ME G+ T+N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
+I + ++ +L+ +MM PS N ++ C +A ++ ++ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
+ P+ +T++ L+ G + + E + L M K P L Y ++I+ LC+ G+ + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
M+ + V IY +++ + + AL+L EM ++G++P S +C
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 91/195 (46%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R + +RG + +++ TLIH ++ D +++ M+ + +PN T TL+ LCK
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
G+L+ + + + + + P + + + + ++E+G L + K + D IAY
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
+ ++ K E A ++ +M + G +S Y T I A+ G + L++EM +
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 192 AGLKPYDETFNLLIE 206
T+ L+ +
Sbjct: 584 CRFAGDASTYGLVTD 598
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 35/256 (13%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
QR +++++N+LI+ DR D +I+ M+ P+ T TLI+ CK ++
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+++ + + + T+LI Q + ++ K+M+ + + + Y+ ++
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 136 YAKVKMRNLESALVVYEEMLK-----------------------------------RGFS 160
K LE A+VV+E + K +G
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 161 ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSY 220
+ Y T I +C+ G EEA L +M+ G P T+N LI + S
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 221 CEQMMSRKLLPSCSAF 236
++M S + S +
Sbjct: 578 IKEMRSCRFAGDASTY 593
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 172/396 (43%), Gaps = 35/396 (8%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRI---------------------------- 45
+E +G++ +IS++T+++ + D VW++
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 46 -------YQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
+ M+ P+ TLI CK G ++ +H + +P V+ T+
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 99 LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
+I Q + E L M K + D++ ++ ++ K +++ A V+ M++ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
S N YTT I C+ G ++ AN L+ EM GL+P T+N ++ G K+ IEE++
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
+ + L + ++ C+ G +A +L L KG P +T++ L+ G+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
G +++ KL M K I+P + SL+ C L+ A +K M S + P
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
YE+LV H + N +A L +EM +G S S
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 174/378 (46%), Gaps = 10/378 (2%)
Query: 6 VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLI 65
A V R + G ++ S+N +IH V + R + M P+ + T++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 66 SALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
+ C+ G+L +++ + K P + S+I + + ++ E M+R+ ++
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 126 HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL 185
DT+ Y+ ++ K ++ +A + EM R + + YT I +C+ G + EA L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 186 MQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCE 245
EM GL+P TF LI G KA ++++ M+ P+ + +I LC+
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 246 CGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPA 305
G+ AN +L G PN TY+ ++ G K G I+E +KL E E ++
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 306 YTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVG---IH--LEKGNKAKALHL 360
YT+L+ + C+ G++++A + K M L P + + L+ +H LE G K L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK-----L 583
Query: 361 CEEMVSEGLKPSTSYLCS 378
M+++G+ P+ + S
Sbjct: 584 LNWMLAKGIAPNATTFNS 601
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 144/287 (50%)
Query: 56 PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
P+ T LI+ CK G ++ + + + CSP V+ T+LI + +E ++ L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
L M + + + Y+ IV K N+E A+ + E G +A++ YTT + AYC+
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
G++++A +++EM GL+P TFN+L+ G +E+ M+++ + P+ +
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
FN ++++ C N K A + +G P+ TY +L+ G+ K ++E L+ EM+
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
K S ++ Y+ LI + K EA + F M+ L +I++
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 132/284 (46%)
Query: 17 RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
+G ++F LI+ K+ +R++ HM++ PN T TLI LCK G L +
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 77 YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
++L + P + S++ + + IEE + L+ + DT+ Y+ ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
A K ++ A + +EML +G + + +C +G +E+ L+ M G+ P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
TFN L++ ++ + + + M SR + P + +++ C+ N K+A +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
KGFS + TYS LI G+ K + E +++ +M + ++
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 42/286 (14%)
Query: 129 IAYSLI--VYAKVKMRNLESALVVYEEML---KRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+A SLI + + K+ N+ + V + ++L + + ++ V+ F ++G + EA
Sbjct: 137 VAQSLISSFWERPKL-NVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREAR 195
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAK-AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
+ ++M N GL ++ N+ + +K + ++ + + + +++N +I
Sbjct: 196 RVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHF 255
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKL------------ 290
+C+ G K+A+ +L L KG++P+ I+YS ++ GY + GE+ +V KL
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 291 -----------------------YYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
+ EM + I P YT+LI C+ G + A K+F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
M S + P V Y +++ + G+ +A L EM +GL+P +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
E G + +++ TL+ KS D I + ML P T L++ C G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
L+ +L+ + K +P SL+ + ++ + K M + + D Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
+V K RN++ A +++EM +GFS + Y+ I + + K EA + +M G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLL 230
L E F+ + K KR + + ++++ L+
Sbjct: 697 LAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 159/334 (47%)
Query: 49 MLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEER 108
+LE P+ LI+ CK ++ +LDR+ K SP + +I + +
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
++ + +L ++L N I Y++++ A + ++ AL + +EML RG + F Y T
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
I C+ G ++ A +++ +E G +P ++N+L+ + EE +M S K
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
P+ ++ +I LC G ++A +L L +KG +P+ +Y LI + +EG + +
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
+ M P + Y +++++LC+ GK ++A + F + P Y ++
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
G+K +ALH+ EM+S G+ P S +C
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 187/412 (45%), Gaps = 39/412 (9%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
+R A V LE+ G + ++N LI+ K +R D R+ M P+ T
Sbjct: 137 LRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVT 195
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+I +LC G+L + +L+++ C P VI T LI + E ++E + L+ ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 121 RKNMIHDTIAYSLIVYAKVK----------MRNL-----ESALVVY-------------- 151
+ + D Y+ I+ K +RNL E ++ Y
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 152 --EEMLKRGFS----ANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLI 205
E+++ + FS N Y+ I C GKIEEA L++ M+ GL P +++ LI
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
+ R++ ++ + E M+S LP +N ++ LC+ G A QA + + G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
PN +Y+ + G+ L + EM I P Y S+IS LC+ G ++EA +
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAK-ALHLCEEMVSEGLKPS-TSY 375
M+S P V Y ++V + K ++ + A+++ E MV G +P+ T+Y
Sbjct: 496 LVDMRSCEFHPSVVTY-NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 1/304 (0%)
Query: 69 CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
C+ G + +L+ + K +P VI+ T LI I + + +++ +L K D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158
Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
AY+ ++ KM ++ A V + M + FS ++ Y IG+ C GK++ A ++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
+ + +P T+ +LIE ++E+L ++M+SR L P +N +IR +C+ G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTS 308
+A M+ KG P+ I+Y+ L+ +G+ +E KL +M + P + Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 309 LISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
LI++LC+ GK+EEA K+MK L P Y+ L+ +G A+ E M+S+G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 369 LKPS 372
P
Sbjct: 399 CLPD 402
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 34/169 (20%)
Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEI---------------------------- 269
++ R C GN ++ +L + KG++P+ I
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 270 ------TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
Y+ LI G+ K I + ++ M K SP Y +I SLC GKL+ A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
K + S + P V Y L+ + +G +AL L +EM+S GLKP
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 158/319 (49%)
Query: 56 PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
PN TLI CK G+++ D+ + T LI + + ++G +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCE 175
++M + + Y+ ++ K + A V++EM +RG S N Y T IG C
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 176 YGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSA 235
K+ EAN ++ +M++ G+ P T+N LI+G ++ ++LS C + SR L PS
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
+N ++ C G+ A M+ ++G P+++TY+ LI +A+ +++ ++L ME
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
+ P + Y+ LI C G++ EA + FK M + P IY +++ + ++G+
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 356 KALHLCEEMVSEGLKPSTS 374
+AL L +EM + L P+ +
Sbjct: 496 RALKLLKEMEEKELAPNVA 514
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 155/316 (49%)
Query: 25 SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
++ LI+ + K+ + +Y+ M E+ +PN T +++ LCK G+ + + D +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 85 HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
+ S ++ +LI + +E ++ E ++ +M + + I Y+ ++ + L
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
AL + ++ RG S + Y + +C G A +++EME G+KP T+ +L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
I+ A++ +E+++ M L+P ++ +I C G +A+ + ++K
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
PNE+ Y+ +I GY KEG LKL EME K ++P + +Y +I LC+ K +EA++
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 325 YFKIMKSHSLVPGVDI 340
+ M + P I
Sbjct: 535 LVEKMIDSGIDPSTSI 550
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 162/348 (46%), Gaps = 20/348 (5%)
Query: 27 NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR--I 84
++L+H +T+S+ + +R+Y E I + + + + + +M+D +
Sbjct: 78 SSLLHYLTESETSKTKFRLY-----------EVIINSYVQSQSLNLSISYFNEMVDNGFV 126
Query: 85 HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
G C L+ ++ + K ++ D ++ +++ + +
Sbjct: 127 PGSNCF------NYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEI 179
Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
E + + E+ + GFS N +YTT I C+ G+IE+A L EM GL + T+ +L
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
I G K ++ E+M + P+ +N ++ +LC+ G K A + ++G
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
S N +TY+ LIGG +E ++ E K+ +M+ I+P L Y +LI C GKL +A
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
+ +KS L P + Y LV KG+ + A + +EM G+KPS
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 168/352 (47%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ ++ +L++ + +R + M+E P+ +I +LCK ++
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
D I K P V+ T+L+ + R + LL M++K + + I YS ++ A
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
VK + A ++EEM++ + Y++ I C + +I+EAN + M + G
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
++N LI G KAKR+E+ + +M R L+ + +N +I+ + G+ +A +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
G SP+ TY+ L+GG GE+++ L ++ +M+ + + + YT++I +C+ G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
K+EEA F + L P + Y +++ KG + L +M EGL
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 174/372 (46%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
++ ++V + + +E G L +FN +I+ + L I ML+ P+ T
Sbjct: 98 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
I +L++ C+ ++ V ++D++ P ++ ++I + + +R+ + K +
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
RK + + + Y+ +V A + +M+K+ + N Y+ + A+ + GK+
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
EA L +EM + P T++ LI G RI+E+ + M+S+ L ++N +I
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
C+ + + +G N +TY+ LI G+ + G++ + + + +M++ IS
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y L+ LC G+LE+A F+ M+ + + Y +++ + G +A L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 361 CEEMVSEGLKPS 372
+ +GLKP
Sbjct: 458 FCSLSLKGLKPD 469
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 171/366 (46%), Gaps = 8/366 (2%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ ++++N +I + K+ R + + ++ + PN T L++ LC +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+L + K+ +P VI ++L+ ++ ++ E L + M+R ++ D + YS ++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
++ A +++ M+ +G A+ Y T I +C+ ++E+ L +EM GL
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T+N LI+G +A ++++ + QM + P +N ++ LC+ G ++A +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+ + +TY+ +I G K G+++E L+ + K + P + YT+++S LC G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
L E + + MK L+ L G+ + L ++M+S G PS
Sbjct: 485 LLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLLKDI 536
Query: 378 SASTCR 383
+ C+
Sbjct: 537 KSGVCK 542
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 145/301 (48%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
+L +D+ + R P ++ L+ I++ ++ + + L K+M + +D ++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
+++ + AL + +MLK G+ + + + +C ++ +A L+ +M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
G KP +N +I+ K KR+ ++ + +++ + + P+ + ++ LC A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+L+ + K +PN ITYS L+ + K G++ E +L+ EM SI P + Y+SLI+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
LC +++EA++ F +M S + V Y +L+ + + L EM GL +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 373 T 373
T
Sbjct: 365 T 365
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 123/265 (46%)
Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
+++ ++ + + L M++ + ++ ++ A VK++ + + + ++M G +
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
+ + I +C ++ A ++ +M G +P T L+ G + R+ +++S ++
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
M+ P A+N +I LC+ A KG PN +TY+ L+ G
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
+ +L +M K I+P + Y++L+ + + GK+ EA + F+ M S+ P + Y S
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 344 LVGIHLEKGNKAKALHLCEEMVSEG 368
L+ +A + + MVS+G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKG 325
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 82/187 (43%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+G ++S+NTLI+ K+ R + ++++ M + N T TLI + G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+ ++ SP + L+ + +E+ +V+ + M ++ M D + Y+ ++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
K +E A ++ + +G + YTT + C G + E L +M+ GL
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 196 PYDETFN 202
D T +
Sbjct: 503 KNDCTLS 509
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 183/376 (48%), Gaps = 3/376 (0%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R E + S++SFN+++ K D+ + +L+ P+ + LI+ LC
Sbjct: 253 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 312
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
G + +++ ++ P + L I +++ ML K + D I Y
Sbjct: 313 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 372
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVY-TTFIGAYCEYGKIEEANCLMQEME 190
++++ + ++ N++ LV+ ++ML RGF NS + + + C+ G+I+EA L +M+
Sbjct: 373 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 432
Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
GL P ++++I G K + + +L ++M +++LP+ ++ LC+ G
Sbjct: 433 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 492
Query: 251 QANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
+A +L + G + + + Y+ +I GYAK G I+E L+L+ + I+P++ + SLI
Sbjct: 493 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 552
Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
C+ + EA K ++K + L P V Y +L+ + GN L EM +EG+
Sbjct: 553 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 612
Query: 371 PS--TSYLCSASTCRG 384
P+ T + CRG
Sbjct: 613 PTNVTYSVIFKGLCRG 628
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 161/345 (46%), Gaps = 13/345 (3%)
Query: 43 WRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILR 102
W + + ML+ P+ T L+ C+ G + + +L + + I+ S++L
Sbjct: 354 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 413
Query: 103 -IIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
+ + RI+E + L +M + D +AYS++++ K+ + AL +Y+EM +
Sbjct: 414 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 473
Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
NS + + C+ G + EA L+ + ++G +N++I+G AK+ IEE+L
Sbjct: 474 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 533
Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
+ ++ + PS + FN +I C+ N +A +L + G +P+ ++Y+ L+ YA
Sbjct: 534 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 593
Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK------------LEEADKYFKIM 329
G + + +L EM+ + I PT Y+ + LC+ K E+ + + M
Sbjct: 594 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 653
Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
+S + P Y +++ + + A E M S L S++
Sbjct: 654 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 698
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 170/386 (44%), Gaps = 47/386 (12%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A + ++ G S L++++ +IH + K + D+ +Y M + PN T L+
Sbjct: 424 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 483
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
LC+ G L +LD + + +++ +I + IEE + L K ++ +
Sbjct: 484 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 543
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------------- 173
++ ++Y K +N+ A + + + G + + YTT + AY
Sbjct: 544 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 603
Query: 174 ----------------------CEYGKIEEANCLMQE------------MENAGLKPYDE 199
C K E N +++E ME+ G+ P
Sbjct: 604 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 663
Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
T+N +I+ + K + + + E M SR L S + +N +I LC G ++A+ +
Sbjct: 664 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 723
Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
++ S ++ Y+ LI + +G+ + +KL++++ ++ + ++ Y+++I+ LC+ +
Sbjct: 724 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLV 783
Query: 320 EEADKYFKIMKSHSLVPGVDIYESLV 345
E+ +F +M S + P +DI E ++
Sbjct: 784 NESKFFFCLMLSQGISPDLDICEVMI 809
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 164/372 (44%), Gaps = 19/372 (5%)
Query: 17 RGFSL-SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
RGF L S+I + ++ + K+ R D ++ M + P+ +I LCK G+
Sbjct: 398 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 457
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+ + D + KR P + +L+L + Q+ + E LL ++ D + Y++++
Sbjct: 458 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 517
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
K +E AL +++ +++ G + + + + I YC+ I EA ++ ++ GL
Sbjct: 518 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 577
Query: 196 PYDETFNLLIEG---CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
P ++ L++ C K I+E +M + + P+ ++ + + LC +
Sbjct: 578 PSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 634
Query: 253 NGMLTLAL------------DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
N +L + +G P++ITY+ +I + + M+ +++
Sbjct: 635 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 694
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
+ Y LI SLC G + +AD + ++ ++ Y +L+ H KG+ A+ L
Sbjct: 695 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 754
Query: 361 CEEMVSEGLKPS 372
+++ G S
Sbjct: 755 FHQLLHRGFNVS 766
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 22/272 (8%)
Query: 109 IEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTT 168
+++ + +LK+M +N+ T +Y+ ++Y R + VY+E+ + N Y+T
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLY---HFRETDKMWDVYKEIKDK----NEHTYST 234
Query: 169 FIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK 228
+ C K+E+A ++ E + P +FN ++ G K ++ + S+ ++
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294
Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALD---KGFSPNEITYSHLIGGYAKEGEIQ 285
L+PS + N +I LC G+ +A L LA D G P+ +TY+ L G+ G I
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEA---LELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351
Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKS-----HSLVPGVDI 340
++ +M K +SP + YT L+ CQ G ++ K M S +S++P +
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 411
Query: 341 YESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
L + G +AL L +M ++GL P
Sbjct: 412 LSGLC----KTGRIDEALSLFNQMKADGLSPD 439
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 130/282 (46%), Gaps = 11/282 (3%)
Query: 101 LRIIQEERI-EEGMV--LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR 157
L++I E+ + EEG + LL RK + + ++++ ++R ++ +L + ++M +
Sbjct: 137 LQVILEQLLQEEGTLCELLSNSFRK-WESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQ 195
Query: 158 GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEES 217
+ ++ Y + + + E K+ + + +E+++ + T++ +++G + +++E++
Sbjct: 196 NLNVSTQSYNSVLYHFRETDKMWD---VYKEIKDKN----EHTYSTVVDGLCRQQKLEDA 248
Query: 218 LSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG 277
+ + + + PS +FN ++ C+ G A L G P+ +++ LI G
Sbjct: 249 VLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILING 308
Query: 278 YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
G I E L+L +M + P Y L G + A + + M L P
Sbjct: 309 LCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 368
Query: 338 VDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSA 379
V Y L+ + GN L L ++M+S G + ++ CS
Sbjct: 369 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 410
>sp|Q9LKU8|PP401_ARATH Pentatricopeptide repeat-containing protein At5g28460
OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1
Length = 766
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 175/373 (46%), Gaps = 8/373 (2%)
Query: 9 DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE------NIRYPNEATIR 62
D+ +++ +++ LI+ + KS R D +++ M N+ +
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 63 TLISALCKGGQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
TLI LCK G+L+ ++L R+ +RC P + LI + ++E ++ RM
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
+ + + + IV + L A+V + +M K G N Y T I A C +E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
A ++M AG P + + LI G + +R +++ E++ A+N +I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
C+ NA++ MLT +G P+ ITY+ LI + K + + V ++ +M + P
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIYESLVGIHLEKGNKAKALHL 360
T+ Y ++I + C G+L+EA K FK M HS V P IY L+ + GN +AL L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 361 CEEMVSEGLKPST 373
EEM + ++P+
Sbjct: 675 KEEMKMKMVRPNV 687
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 142/351 (40%), Gaps = 37/351 (10%)
Query: 24 ISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
I FNTLI + K R + M LE PN T LI C+ G+L+T +++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 83 RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
R+ P V+ +++ + + + +V M ++ + + + Y +++A +
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 143 NLESALVVYEEMLKRG-----------------------------------FSANSFVYT 167
N+E A+ YE+ML+ G FS + Y
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
IG +C+ E+ ++ +ME G KP T+N LI K K E EQM
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
L P+ + + +I C G +A + + L +PN + Y+ LI ++K G +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
L L EM+ K + P + Y +L L + + E K M S P
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 136/301 (45%), Gaps = 3/301 (0%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+E+ G +++++ TLIH + Y+ MLE P+ LIS LC+ +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ +++++ S ++ LI + E+ +L M ++ D+I Y+
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NA 192
++ K ++ ES + E+M + G Y I AYC G+++EA L ++M ++
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
+ P +N+LI +K ++LS E+M + + P+ +N + + L E +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
++ +++ PN+IT L+ + E+ ++ K + Y SPT A + S
Sbjct: 707 LKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK--FMQGYSVASPTEKASPFDVFS 764
Query: 313 L 313
L
Sbjct: 765 L 765
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 36/203 (17%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E +++ +E+ G I++NTLI K + V R+ + M E+ P T +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKN 123
I A C G+L +E + L K M L
Sbjct: 623 IDAYCSVGEL-----------------------------------DEALKLFKDMGLHSK 647
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ +T+ Y++++ A K+ N AL + EEM + N Y E + E
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL 707
Query: 184 CLMQEMENAGLKPYDETFNLLIE 206
LM EM +P T +L+E
Sbjct: 708 KLMDEMVEQSCEPNQITMEILME 730
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 169/361 (46%), Gaps = 38/361 (10%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRY-PNEATIRTLISALCKGGQLQT 76
G S+ S NTL++V+ ++ R DLV ++++ E+ PN T L+ ALCK +++
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 77 YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
+LD I ++ + + Y+ I+
Sbjct: 210 AYKVLDEIPSM-----------------------------------GLVPNLVTYTTILG 234
Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKP 196
V ++ESA V EEML RG+ ++ YT + YC+ G+ EA +M +ME ++P
Sbjct: 235 GYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEP 294
Query: 197 YDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGML 256
+ T+ ++I K K+ E+ + ++M+ R +P S ++I LCE +A G+
Sbjct: 295 NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354
Query: 257 TLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQC 316
L P+ S LI KEG + E KL+ E E SI P+L Y +LI+ +C+
Sbjct: 355 RKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEK 413
Query: 317 GKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS-TSY 375
G+L EA + + M P Y L+ + GN + + + EEM+ G P+ T++
Sbjct: 414 GELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
Query: 376 L 376
L
Sbjct: 474 L 474
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 4/255 (1%)
Query: 12 RYLEQ---RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISAL 68
R LE+ RG+ ++ L+ K R + M +N PNE T +I AL
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 69 CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
CK + +M D + + P + +I + ++ +++E L ++ML+ N + D
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
S +++ K + A +++E ++G + Y T I CE G++ EA L +
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
M KP T+N+LIEG +K ++E + E+M+ P+ + F + L + G
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 249 AKQANGMLTLALDKG 263
+ A ++++A+ G
Sbjct: 486 EEDAMKIVSMAVMNG 500
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 130/329 (39%), Gaps = 8/329 (2%)
Query: 54 RYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGM 113
R+P R L SA LQ Y I + P + L+ I Q++ I+ +
Sbjct: 10 RFPPFVASRRLFSASASAASLQQYCTEKPPI---KPWPQRLFPKRLVSMITQQQNIDLAL 66
Query: 114 --VLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR--GFSANSFVYTTF 169
L H+ Y I++ + R + + ++ ++
Sbjct: 67 QIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDL 126
Query: 170 IGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS-YCEQMMSRK 228
+ Y G+ E + + + + G+K + N L+ + +R + + + S
Sbjct: 127 LRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFG 186
Query: 229 LLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVL 288
+ P+ N +++ LC+ + + A +L G PN +TY+ ++GGY G+++
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
++ EM + P YT L+ C+ G+ EA M+ + + P Y ++
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 349 LEKGNKAKALHLCEEMVSEGLKPSTSYLC 377
++ +A ++ +EM+ P +S C
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCC 335
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 169/352 (48%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S++ FN L+ + K + D+V + + M T LI+ C+ Q+ + +L
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P ++ +SL+ +RI + + L+ +M+ DTI ++ +++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A+ + + M++RG N Y + C+ G + A L+ +ME A ++ F
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N +I+ K + ++++L+ ++M ++ + P+ ++ +I LC G A+ +L+ ++
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
K +PN +T++ LI + KEG+ E KLY +M +SI P + Y SL++ C +L++
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
A + F+ M S P V Y +L+ + L EM GL T
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 162/353 (45%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ S+++ ++L++ R + M+E P+ T TLI L +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
V ++DR+ + C P ++ ++ + + + + LL +M + D + ++ I+ +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
K R+++ AL +++EM +G N Y++ I C YG+ +A+ L+ +M + P
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
TFN LI+ K + E+ + M+ R + P +N ++ C +A M
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+ K P+ +TY+ LI G+ K +++ +L+ EM ++ + YT+LI L G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
+ A K FK M S + P + Y L+ G KAL + + M +K
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 168/386 (43%), Gaps = 35/386 (9%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
QRG +L+++ +++ + K DL + M + T+I +LCK +
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+++ + K P V+ +SLI + R + LL M+ K + + + ++ ++
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
A VK A +Y++M+KR + F Y + + +C + ++++A + + M +
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+N LI+G K+KR+E+ +M R L+ + +I+ L G+ A +
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME-------------------- 295
+ G P+ +TYS L+ G G++++ L+++ M+
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 296 ---------------YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDI 340
K + P + Y ++IS LC L+EA K MK +P
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 341 YESLVGIHLEKGNKAKALHLCEEMVS 366
Y +L+ HL G+KA + L EM S
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRS 603
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 172/372 (46%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M+ F+V + +++ L ++N LI+ + + L + M++ P+ T
Sbjct: 98 MKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C G ++ V ++D++ P I T+LI + + E + L+ RM+
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ + + Y ++V K + + AL + +M A+ ++ T I + C+Y ++
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L +EME G++P T++ LI R ++ M+ +K+ P+ FN +I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
+ G +A + + + P+ TY+ L+ G+ + + +++ M K
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P + Y +LI C+ ++E+ + F+ M LV Y +L+ G+ A +
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 361 CEEMVSEGLKPS 372
++MVS+G+ P
Sbjct: 458 FKQMVSDGVPPD 469
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 161/358 (44%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+ G+ I+F TLIH + ++ + M++ PN T +++ LCK G
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+++L+++ + V++ ++I + + +++ + L K M K + + + YS ++
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
A + +M+++ + N + I A+ + GK EA L +M +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+N L+ G R++++ E M+S+ P +N +I+ C+ + +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+G + +TY+ LI G +G+ K++ +M + P + Y+ L+ LC
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
GKLE+A + F M+ + + IY +++ + G L + +G+KP+
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 148/334 (44%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
R + A ++ + +E +G +++++++LI + R ++ M+E PN T
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
LI A K G+ + D + + P + SL+ +R+++ + + M+
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
K+ D + Y+ ++ K + +E ++ EM RG ++ YTT I G +
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
A + ++M + G+ P T+++L++G ++E++L + M ++ + MI
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
+C+ G + KG PN +TY+ +I G + +QE L +M+ P
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
Y +LI + + G + + + M+S V
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 607
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 134/285 (47%)
Query: 88 RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
R P ++ L+ I + ++ + + L ++M R ++H Y++++ + + A
Sbjct: 80 RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 139
Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
L + +M+K G+ + ++ + YC +I +A L+ +M G +P TF LI G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
+ E+++ ++M+ R P+ + ++ LC+ G+ A +L +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
+ ++ +I K + + L L+ EME K I P + Y+SLIS LC G+ +A +
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
M + P + + +L+ +++G +A L ++M+ + P
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 125/269 (46%)
Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
+ + ++++ + L M++ + + ++ ++ A KM+ + + + E+M +
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
+ Y I +C +I A L+ +M G +P T + L+ G KRI ++++ +Q
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
M+ P F +I L A +A ++ + +G PN +TY ++ G K G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
L L +ME I + + ++I SLC+ +++A FK M++ + P V Y S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
L+ G + A L +M+ + + P+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPN 329
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%)
Query: 157 RGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEE 216
R FS+ S Y + K+++A L M + P FN L+ AK K+ +
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 217 SLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIG 276
+S E+M +++ +N +I C A +L + G+ P+ +T S L+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 277 GYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
GY I + + L +M P +T+LI L K EA M P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 337 GVDIYESLVGIHLEKGNKAKALHLCEEM 364
+ Y +V ++G+ AL+L +M
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKM 251
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 164/359 (45%), Gaps = 1/359 (0%)
Query: 17 RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
+G L+++ +I+ + K DL + M + + T+I LCK +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 77 YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
D+ +++ K P V LI + R + LL ML KN+ D + ++ ++
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 137 AKVKMRNLESALVVYEEMLKRGFSANSFV-YTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
A VK L A +Y+EM+K V Y T I +C+Y ++EE + +EM GL
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
T+ LI G +A+ + + +QM+S + P +N ++ LC GN + A +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+ + +TY+ +I K G++++ L+ + K + P + YT+++S C+
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 316 CGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
G EEAD F MK +P Y +L+ L G++A + L +EM S G S
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 169/352 (48%), Gaps = 1/352 (0%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
S++ F+ L+ + K ++ DLV + + M N T I+ C+ QL + +L
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
++ P ++ SL+ RI E + L+ +M+ DT+ ++ +V+ +
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
A+ + E M+ +G + Y I C+ G+ + A L+ +ME ++ +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N +I+G K K ++++ +M ++ + P +N +I LC G A+ +L+ L+
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM-EYKSISPTLPAYTSLISSLCQCGKLE 320
K +P+ + ++ LI + KEG++ E KLY EM + K P + AY +LI C+ ++E
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
E + F+ M LV Y +L+ + + A + ++MVS+G+ P
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 126/275 (45%)
Query: 102 RIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSA 161
+++Q+ ++++ + L M++ + +S ++ A KM + + + E+M G S
Sbjct: 49 KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 108
Query: 162 NSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYC 221
N + Y+ FI +C ++ A ++ +M G P T N L+ G RI E+++
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 222 EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKE 281
+QM+ P F ++ L + A +A ++ + KG P+ +TY +I G K
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 282 GEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIY 341
GE L L +ME I + Y ++I LC+ +++A F M++ + P V Y
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 342 ESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
L+ G + A L +M+ + + P +
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 36/302 (11%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AFD+ +E +G + ++N LI + R R+ MLE P+ LI
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 67 ALCKGGQLQTYVDMLDR-IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI 125
A K G+L + D + K C P V+ +LI + +R+EEGM + + M ++ ++
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 126 HDTIAYSLIVYAKVKMR-----------------------------------NLESALVV 150
+T+ Y+ +++ + R N+E+ALVV
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 151 YEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK 210
+E M KR + YTT I A C+ GK+E+ L + G+KP T+ ++ G +
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
EE+ + +M LP+ +N +IR G+ + ++ GF+ + T
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
Query: 271 YS 272
+
Sbjct: 569 FG 570
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 56/261 (21%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E +V R + QRG + +++ TLIH ++ D +++ M+ + +P+ T L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
+ LC G ++T +V+ + M +++M
Sbjct: 433 LDGLCNNGNVET-----------------------------------ALVVFEYMQKRDM 457
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
D + Y+ ++ A K +E ++ + +G N YTT + +C G EEA+
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
L EM+ G P T+N LI A+ + +E+ S E+I+ +
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIR--ARLRDGDEAASA-----------------ELIKEMR 558
Query: 245 ECGNAKQAN--GMLTLALDKG 263
CG A A+ G++T L G
Sbjct: 559 SCGFAGDASTFGLVTNMLHDG 579
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 172/372 (46%), Gaps = 3/372 (0%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
F A D+ ++ + S+I F L++V+ K + D+V + H+ + T
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
L++ C+ Q L ++ P ++ TSLI R+EE M ++ +M+
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ D + Y+ I+ + K ++ AL ++++M G + +YT+ + C G+ +A+
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
L++ M +KP TFN LI+ K + ++ +M+ + P+ + +I
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C G +A M L KG P+ + Y+ LI G+ K ++ + +K++YEM K ++
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
YT+LI Q GK A + F M S + P + Y L+ G KAL + E+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 364 MVS---EGLKPS 372
M +G+ P+
Sbjct: 413 MQKREMDGVAPN 424
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 172/359 (47%), Gaps = 3/359 (0%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
GF +++F +LI+ +R + + M+E P+ T+I +LCK G +
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+ + D++ P V++ TSL+ + R + LL+ M ++ + D I ++ ++ A
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
VK A +Y EM++ + N F YT+ I +C G ++EA + ME G P
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
+ LI G K K++++++ +M + L + + +I+ + G A + +
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM---EYKSISPTLPAYTSLISSLC 314
+ +G PN TY+ L+ G++++ L ++ +M E ++P + Y L+ LC
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 315 QCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
GKLE+A F+ M+ + G+ Y ++ + G A++L + S+G+KP+
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 141/301 (46%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
Q +D+ + R P +I T L+ I + ++ + + L + + HD +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
L++ + A +M+K GF + +T+ I +C ++EEA ++ +M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
G+KP + +I+ K + +LS +QM + + P + ++ LC G + A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+ +L + P+ IT++ LI + KEG+ + +LY EM SI+P + YTSLI+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
C G ++EA + F +M++ P V Y SL+ + A+ + EM +GL +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 373 T 373
T
Sbjct: 352 T 352
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 3/292 (1%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R + +R +I+FN LI K + +Y M+ PN T +LI+ C
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
G + M + K C P V+ TSLI + +++++ M + M +K + +TI Y
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCL---MQE 188
+ ++ ++ A V+ M+ RG N Y + C GK+++A + MQ+
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 189 MENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGN 248
E G+ P T+N+L+ G ++E++L E M R++ + +I+ +C+ G
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 249 AKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
K A + KG PN +TY+ +I G +EG E L+ +M+ +S
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|Q9M316|PP292_ARATH Pentatricopeptide repeat-containing protein At3g61520,
mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2
SV=1
Length = 766
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 175/373 (46%), Gaps = 8/373 (2%)
Query: 9 DVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLE------NIRYPNEATIR 62
D+ +++ +++ LI+ + KS R D +++ M N+ +
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFN 374
Query: 63 TLISALCKGGQLQTYVDMLDRIH-GKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
TLI LCK G+L+ ++L R+ +RC+P + LI + ++E ++ RM
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
+ + + + IV + L A+V + +M K G N Y T I A C +E+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
A ++M AG P + + LI G + +R +++ E++ A+N +I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
C+ N ++ MLT +G P+ ITY+ LI + K + + V ++ +M + P
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV-PGVDIYESLVGIHLEKGNKAKALHL 360
T+ Y ++I + C G+L+EA K FK M HS V P IY L+ + GN +AL L
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Query: 361 CEEMVSEGLKPST 373
EEM + ++P+
Sbjct: 675 KEEMKMKMVRPNV 687
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 142/351 (40%), Gaps = 37/351 (10%)
Query: 24 ISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCKGGQLQTYVDMLD 82
I FNTLI + K R + M LE PN T LI C+ G+L+T +++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 83 RIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMR 142
R+ P V+ +++ + + + +V M ++ + + + Y +++A +
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 143 NLESALVVYEEMLKRG-----------------------------------FSANSFVYT 167
N+E A+ YE+ML+ G FS + Y
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
IG +C+ E+ ++ +ME G KP T+N LI K K E EQM
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGML-TLALDKGFSPNEITYSHLIGGYAKEGEIQE 286
L P+ + + +I C G +A + + L +PN + Y+ LI ++K G +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 287 VLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPG 337
L L EM+ K + P + Y +L L + + E K M S P
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 136/301 (45%), Gaps = 3/301 (0%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+E+ G +++++ TLIH + Y+ MLE P+ LIS LC+ +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ +++++ S ++ LI + E+ +L M ++ D+I Y+
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME-NA 192
++ K ++ ES + E+M + G Y I AYC G+++EA L ++M ++
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
+ P +N+LI +K ++LS E+M + + P+ +N + + L E +
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETL 706
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
++ +++ PN+IT L+ + E+ ++ K + Y SPT A + S
Sbjct: 707 LKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK--FMQGYSVASPTEKASPFDVFS 764
Query: 313 L 313
L
Sbjct: 765 L 765
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 36/203 (17%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E +++ +E+ G I++NTLI K + V R+ + M E+ P T +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM-LRKN 123
I A C G+L +E + L K M L
Sbjct: 623 IDAYCSVGEL-----------------------------------DEALKLFKDMGLHSK 647
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ +T+ Y++++ A K+ N AL + EEM + N Y E + E
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL 707
Query: 184 CLMQEMENAGLKPYDETFNLLIE 206
LM EM +P T +L+E
Sbjct: 708 KLMDEMVEQSCEPNQITMEILME 730
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 166/356 (46%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G SL L +FN L+ V+ K ++ +++ PN T I LC+ G+L
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
V M+ + + P VI +LI + + + +E V L +M+ + + D+ Y+ ++
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
K ++ A + + + GF + F Y + I C G+ A L E G+KP
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
+N LI+G + I E+ +M + L+P FN ++ LC+ G A+G++
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+ + KG+ P+ T++ LI GY+ + +++ L++ M + P + Y SL++ LC+
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
K E+ + +K M P + + L+ +AL L EEM ++ + P
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 162/360 (45%), Gaps = 3/360 (0%)
Query: 25 SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
++NTLI K L RI + N P++ T R+LI LC G+ + + +
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 85 HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
GK P VI+ +LI + + I E L M K +I + ++++V KM +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
A + + M+ +G+ + F + I Y K+E A ++ M + G+ P T+N L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
+ G K + E+ + + M+ + P+ FN ++ LC +A G+L +K
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEME--YKSISPTLPAYTSLISSLCQCGKLEEA 322
+P+ +T+ LI G+ K G++ L+ +ME YK +S + P Y +I + + + A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK-VSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 323 DKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
+K F+ M L P Y +V + GN EM+ G PS + L C
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 163/355 (45%), Gaps = 8/355 (2%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
++ S+N ++ V+ S D ++Y M + P+ + + + CK + + +L
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+ + + C V+ +++ +E EG L +ML + ++ ++ K
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA----NCLMQEMENAGLKPY 197
+++ + ++++KRG N F Y FI C+ G+++ A CL+++ G KP
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ----GPKPD 285
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T+N LI G K + +E+ Y +M++ L P +N +I C+ G + A ++
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
A+ GF P++ TY LI G EGE L L+ E K I P + Y +LI L G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
+ EA + M L+P V + LV + G + A L + M+S+G P
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 164/360 (45%), Gaps = 1/360 (0%)
Query: 15 EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENI-RYPNEATIRTLISALCKGGQ 73
++ GF +L ++ ++I + + + + + M EN+ + E + + G+
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGK 91
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+Q V++ +R+ C P V +++ ++ ++ + RM + + D ++++
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
+ + K +AL + M +G N Y T +G + E E L +M +G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
+ TFN L+ K ++E ++++ R +LP+ +N I+ LC+ G A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
M+ +++G P+ ITY++LI G K + QE +M + + P Y +LI+
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
C+ G ++ A++ + VP Y SL+ +G +AL L E + +G+KP+
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 17 RGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQT 76
+G+ + +FN LIH + + + I ML+N P+ T +L++ LCK + +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 77 YVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVY 136
++ + K C+P + L+ + + +++E + LL+ M K++ D + + ++
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 137 AKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
K +L+ A ++ +M + S+++ Y I A+ E + A L QEM + L
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+ L+++G K + + +MM +PS + +I LC +A G+
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Query: 256 LTLALDKGFSPNEIT 270
+ + KG P +
Sbjct: 695 IHRMVQKGLVPEAVN 709
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 112/255 (43%), Gaps = 7/255 (2%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
E A ++ + G + ++N+L++ + K+ + + V Y+ M+E PN T L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
+ +LC+ +L + +L+ + K +P + +LI + ++ L ++M
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 125 I-HDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ T Y++I++A + N+ A +++EM+ R + + Y + +C+ G +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
+ EM G P T +I R+ E+ +M+ + L+P E + +
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP------EAVNTI 711
Query: 244 CECGNAKQANGMLTL 258
C+ + A L L
Sbjct: 712 CDVDKKEVAAPKLVL 726
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 165/349 (47%), Gaps = 2/349 (0%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYP-NEATIRTLISALCKGGQLQTYVDM 80
S+ F+ L+ ++K + D+V +++ M + + P N T L++ C+ QL +
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 81 LDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVK 140
L ++ P ++ SL+ + +R+ + + + +M+ + + Y+ I+ K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 141 MRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDET 200
+ +++AL + M K G + Y + I C G+ +A ++ M + P T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 201 FNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
FN LI+ C K R+ E+ + E+M+ R L P ++ +I LC +A M +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLE 320
KG P+ +TYS LI GY K +++ +KL+ EM + + YT LI C+ GKL
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 321 EADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
A++ F+ M + P + Y L+ + G KAL + +M G+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 170/359 (47%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G S+++F +L++ + DR ++ M+ PN T+I LCK Q+
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+D+L+R+ P V+ SLI + R + ++ M ++ + D ++ ++ A
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
VK + A YEEM++R + Y+ I C Y +++EA + M + G P
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T+++LI G K+K++E + +M R ++ + + +I+ C G A +
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+ G PN ITY+ L+ G G+I++ L + +M+ + + Y +I +C+ G
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYL 376
++ +A + + L+P + Y +++ +KG + +A L +M +G+ P+ Y+
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 144/330 (43%), Gaps = 35/330 (10%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A D+ +E+ G ++++N+LI + S R R+ M + YP+ T LI
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
A K G++ + + + + P ++ + LI + R++E + M+ K
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D + YS+++ K + +E + ++ EM +RG N+ YT I YC GK+ A +
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
+ M G+ P T+N+L+ G +IE++L M
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM---------------------- 422
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
Q NGM + +TY+ +I G K GE+ + +Y + + + P + Y
Sbjct: 423 ----QKNGM---------DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVP 336
T+++ L + G EAD F+ MK ++P
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 146/321 (45%), Gaps = 4/321 (1%)
Query: 55 YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPM-VIVNTSLILRIIQE-ERIEEG 112
Y N + R ++ + +L +D+ H +C P+ I + S +L I + ++ +
Sbjct: 43 YSNGSDYREMLRNGIRFMKLDDSLDLF--FHMVQCRPLPSIADFSRLLSAISKMKKYDVV 100
Query: 113 MVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGA 172
+ L ++M + H+ ++++ + L AL +M+K G + + + +
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 173 YCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPS 232
+C ++ +A + +M G KP +N +I+G K+K+++ +L +M + P
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 233 CSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYY 292
+N +I LC G A M++ + P+ T++ LI KEG + E + Y
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 293 EMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKG 352
EM +S+ P + Y+ LI LC +L+EA++ F M S P V Y L+ + +
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 353 NKAKALHLCEEMVSEGLKPST 373
+ L EM G+ +T
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNT 361
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 100/254 (39%), Gaps = 35/254 (13%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+ +R + +FN LI K R Y+ M+ P+ T LI LC +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
L +M + K C P V+ + LI + +++E GM L M ++ ++ +T+ Y++
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 134 IV--YAKVKMRN---------------------------------LESALVVYEEMLKRG 158
++ Y + N +E ALV+ +M K G
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
A+ Y I C+ G++ +A + + GL P T+ ++ G K E+
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486
Query: 219 SYCEQMMSRKLLPS 232
+ +M +LP+
Sbjct: 487 ALFRKMKEDGILPN 500
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 54/116 (46%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
VA ++ R + G ++I++N L+H + + + + I M +N + T
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
+I +CK G++ D+ ++ + P + T+++L + ++ E L ++M
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 175/407 (42%), Gaps = 39/407 (9%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
F+ A ++ +++ +G + ++N LIH + +S+R + + + M + + +PNE T T
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI+ G++ +L+ + SP + +LI I E +E + + M K
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ ++Y +++ K + A Y M + G YT I C+ G ++EA
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKR------------------------------ 213
L+ EM G+ P T++ LI G K R
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483
Query: 214 -----IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
++E++ E M+ FN ++ LC+ G +A + G PN
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
+++ LI GY GE + ++ EM PT Y SL+ LC+ G L EA+K+ K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 329 MKSHSLVPGVD--IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ H++ VD +Y +L+ + GN AKA+ L EMV + P +
Sbjct: 604 L--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 167/366 (45%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
+ + + ++ R + GF+ S+ + N ++ V KS + VW + ML+ P+ AT
Sbjct: 138 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 197
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
LI+ LC G + ++ ++ +P ++ +++ ++ R + + LL M K
Sbjct: 198 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 257
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
+ D Y+++++ + + ++ +M KR N Y T I + GK+ A
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 317
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
+ L+ EM + GL P TFN LI+G +E+L M ++ L PS ++ ++
Sbjct: 318 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 377
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
LC+ A G G ITY+ +I G K G + E + L EM I P
Sbjct: 378 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 437
Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
+ Y++LI+ C+ G+ + A + + L P IY +L+ G +A+ + E
Sbjct: 438 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Query: 363 EMVSEG 368
M+ EG
Sbjct: 498 AMILEG 503
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 148/316 (46%)
Query: 57 NEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLL 116
N + LI + G +Q +++ + +P V +++ +++ L
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 117 KRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEY 176
K ML++ + D +++++ + E + + ++M K G++ Y T + YC+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 177 GKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAF 236
G+ + A L+ M++ G+ T+N+LI ++ RI + M R + P+ +
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 237 NEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY 296
N +I G A+ +L L G SPN +T++ LI G+ EG +E LK++Y ME
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 297 KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
K ++P+ +Y L+ LC+ + + A ++ MK + + G Y ++ + G +
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 357 ALHLCEEMVSEGLKPS 372
A+ L EM +G+ P
Sbjct: 422 AVVLLNEMSKDGIDPD 437
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 162/370 (43%), Gaps = 36/370 (9%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
F++A +++ G + I++ +I + K+ D + M ++ P+ T
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI+ CK G+ +T +++ RI+ SP
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSP-------------------------------- 471
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ I YS ++Y +M L+ A+ +YE M+ G + + F + + + C+ GK+ EA
Sbjct: 472 ---NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
M+ M + G+ P +F+ LI G + ++ S ++M P+ + +++ L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C+ G+ ++A L + + + Y+ L+ K G + + + L+ EM +SI P
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSH-SLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
YTSLIS LC+ GK A + K ++ +++P +Y V + G ++ E
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708
Query: 363 EMVSEGLKPS 372
+M + G P
Sbjct: 709 QMDNLGHTPD 718
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 174/465 (37%), Gaps = 106/465 (22%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R + G + +SF+ LI+ S + ++ M + +P T +L+ LCKG
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
G L+ L +H + ++ +L+ + + + + + L M++++++ D+ Y
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 132 S--------------LIVYAK----------------------VKMRNLESALVVYEEML 155
+ I++AK K ++ + E+M
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 156 KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 215
G + + I Y GKIE+ N L+ EM N P T+N+L+ G +K K +
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771
Query: 216 ESLSYCEQMMSRKLLP---SCSA--------------------------------FNEMI 240
S ++ +LP +C + FN +I
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 241 RRLCECGNAKQANGM------LTLALDK-----------------------------GFS 265
+ C G A + L ++LDK G S
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891
Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
P Y LI G + G+I+ + EM I P A ++++ +L +CGK +EA
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951
Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
+ M LVP + + +L+ + + GN +AL L M + GLK
Sbjct: 952 LRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%)
Query: 160 SANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS 219
++N VY I Y G I+++ + + M G P T N ++ K+ S
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 220 YCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA 279
+ ++M+ RK+ P + FN +I LC G+ ++++ ++ G++P +TY+ ++ Y
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 280 KEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVD 339
K+G + ++L M+ K + + Y LI LC+ ++ + + M+ + P
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 340 IYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
Y +L+ +G A L EM+S GL P+
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 138/332 (41%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
++ G + +++ N +I ++ + + + M PN T L+ K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ T + I P + SL+L I + +E G+ +LK + + + D +++
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
++ + A + + M G S + + + +E+ ++ EM G
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
+ P + LI G + I+ + E+M++ K+ P A + M+R L +CG A +A
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
+L L P +++ L+ K G + E L+L M + L +Y LI+ L
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
C G + A + ++ MK + Y++L+
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 146/338 (43%), Gaps = 5/338 (1%)
Query: 43 WRI---YQHMLENIRY-PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTS 98
W+ ++ ++N+ + P+ T +I + G+++ D+L + + P +
Sbjct: 700 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759
Query: 99 LILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRG 158
L+ + + + +L + ++ ++ D + +V + LE L + + + RG
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819
Query: 159 FSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
+ + + I C G+I A L++ M + G+ +T + ++ + R +ES
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
+M + + P + +I LC G+ K A + + P + S ++
Sbjct: 880 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939
Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGV 338
AK G+ E L M + PT+ ++T+L+ C+ G + EA + +M + L +
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 339 DIYESLVGIHLEKGNKAKALHLCEEMVSEG-LKPSTSY 375
Y L+ KG+ A A L EEM +G L +T+Y
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1037
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
+L ++N L+H +K + +Y+ ++ N P++ T +L+ +C+ L+ + +L
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+ LI + I L+K M + D +V +
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
+ + +V EM K+G S S Y I C G I+ A + +EM + P +
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
+ ++ AK + +E+ M+ KL+P+ ++F ++ C+ GN +A + + +
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
G + ++Y+ LI G +G++ +LY EM+ Y +LI L
Sbjct: 993 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/199 (17%), Positives = 79/199 (39%), Gaps = 35/199 (17%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AFD+ + + G SL + + ++ V+ ++ R + M + P LI+
Sbjct: 843 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 902
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
LC+ G ++T + + + + P + ++++ + + + +E +LL+ ML+ ++
Sbjct: 903 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962
Query: 127 -----------------------------------DTIAYSLIVYAKVKMRNLESALVVY 151
D ++Y++++ ++ A +Y
Sbjct: 963 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1022
Query: 152 EEMLKRGFSANSFVYTTFI 170
EEM GF AN+ Y I
Sbjct: 1023 EEMKGDGFLANATTYKALI 1041
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 175/363 (48%), Gaps = 4/363 (1%)
Query: 4 FEVAFDV-CRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEA-TI 61
F+ AF + C L+ R S++ F ++ V+ K ++ D+V +Y H +EN+ ++ +
Sbjct: 60 FDDAFSLFCEMLQSRPIP-SIVDFTRVLTVIAKMNKFDIVIYLY-HKMENLGISHDLYSF 117
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
LI C+ +L + +L ++ P ++ SL+ Q R +E + L+ M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
+ + + Y+ ++ K R+L +AL V+ M K+G A++ Y T I G+ +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
A L+++M + P F LI+ K + E+ + ++M+ R ++P+ +N +I
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
C G A M L + KG P+ +TY+ LI G+ K +++ +KL+ EM Y+ +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
Y +LI CQ GKL A K F M + P + Y L+ G KAL +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 362 EEM 364
E++
Sbjct: 418 EDL 420
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 180/404 (44%), Gaps = 39/404 (9%)
Query: 8 FDVCRYL----EQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
FD+ YL E G S L SF LIH + R L + M++ P+ T+ +
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSP-MVIVNT------------------------- 97
L++ C+G + Q V ++D + G P +VI NT
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 98 ---------SLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
+LI + R + LL+ M+++ + + I ++ ++ VK NL A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
+Y+EM++R N F Y + I +C +G + +A + M + G P T+N LI G
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
K+KR+E+ + +M + L+ +N +I C+ G A + +D G SP+
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
+TY+ L+ G+I++ L + +++ + + Y +I LC+ KL+EA F+
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
+ + P Y +++ KG + +A LC M +G PS
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 132/300 (44%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A +V +E++G +++NTLI ++ S R R+ + M++ PN LI
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
K G L ++ + + P V SLI + + + M+ K
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D + Y+ ++ K + +E + ++ EM +G ++F Y T I YC+ GK+ A +
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
M + G+ P T+N+L++ +IE++L E + ++ +N +I+ LC
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
K+A + KG P+ I Y +I G ++G +E KL M+ P+ Y
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 120/261 (45%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R + +R ++I F LI K +Y+ M+ PN T +LI+ C
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
G L M D + K C P V+ +LI + +R+E+GM L M + ++ D Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
+ +++ + L A V+ M+ G S + Y + C GKIE+A ++++++
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
+ + T+N++I+G + +++E+ + + + P A+ MI LC G ++
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482
Query: 252 ANGMLTLALDKGFSPNEITYS 272
A+ + + GF P+E Y
Sbjct: 483 ADKLCRRMKEDGFMPSERIYD 503
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%)
Query: 108 RIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYT 167
+ ++ L ML+ I + ++ ++ KM + + +Y +M G S + + +T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 168 TFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSR 227
I +C ++ A L+ +M G +P T L+ G + R +E++S + M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 228 KLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEV 287
+P+ +N +I LC+ + A + KG + +TY+ LI G + G +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 288 LKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGI 347
+L +M + I P + +T+LI + + G L EA +K M S+VP V Y SL+
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 348 HLEKGNKAKALHLCEEMVSEGLKPST 373
G A ++ + MVS+G P
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDV 324
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%)
Query: 88 RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESA 147
R P ++ T ++ I + + + + L +M + HD +++++++ + L A
Sbjct: 74 RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLA 133
Query: 148 LVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEG 207
L + +M+K GF + + + +C+ + +EA L+ M+ G P +N +I G
Sbjct: 134 LALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 193
Query: 208 CAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPN 267
K + + +L M + + +N +I L G A +L + + PN
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 268 EITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFK 327
I ++ LI + KEG + E LY EM +S+ P + Y SLI+ C G L +A F
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 328 IMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
+M S P V Y +L+ + + L EM +GL
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%)
Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
K ++A L EM + P F ++ AK + + + +M + + +F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
+I C C A +L + GF P+ +T L+ G+ + QE + L M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
P + Y ++I+ LC+ L A + F M+ + Y +L+ G A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 358 LHLCEEMVSEGLKPSTSYL 376
L +MV + P+ +
Sbjct: 239 ARLLRDMVKRKIDPNVIFF 257
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%)
Query: 236 FNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEME 295
+ E +R C A + L P+ + ++ ++ AK + V+ LY++ME
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 296 YKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA 355
IS L ++T LI C+C +L A M P + SL+ +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 356 KALHLCEEMVSEGLKPST 373
+A+ L + M G P+
Sbjct: 167 EAVSLVDSMDGFGFVPNV 184
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 174/366 (47%), Gaps = 11/366 (3%)
Query: 6 VAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT-L 64
+A+ R +E GF + +I + T+++ + K+ + +L+ I + ++ I T L
Sbjct: 178 LAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILK-IGFVLDSHIGTSL 236
Query: 65 ISALCKGGQLQTYVDMLDRIHGK-RCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
+ C+G L+ + + D + + C+P + + LI + + R+EE L +M K
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
T Y++++ A ++ A +++EM+ RG N YT I C GKIEEAN
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
+ ++M + P T+N LI G K R+ + M R P+ FNE++ L
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C G +A +L LD G SP+ ++Y+ LI G +EG + KL M I P
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIM--KSHSL--VPGVDIYESLVGIHLEKGNKAKALH 359
+T++I++ C+ GK + A + +M K SL V G + + + + G AL
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKV----GKTRDALF 532
Query: 360 LCEEMV 365
+ E +V
Sbjct: 533 ILETLV 538
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 171/363 (47%), Gaps = 3/363 (0%)
Query: 8 FDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISA 67
FD R E GF L+ +++L+ + K D L + Y+ M + RT+++A
Sbjct: 147 FDELR--EVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNA 204
Query: 68 LCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK-NMIH 126
LCK G + + +I + TSL+L + + + + + M ++
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP 264
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
++++YS++++ ++ LE A + ++M ++G ++ YT I A C+ G I++A L
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
EM G KP T+ +LI+G + +IEE+ C +M+ ++ PS +N +I C+
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G A +LT+ + PN T++ L+ G + G+ + + L M +SP + +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
LI LC+ G + A K M + P + +++ ++G A M+
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 367 EGL 369
+G+
Sbjct: 505 KGI 507
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 171/366 (46%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
L + AF++ + RG ++ ++ LI + + + + + + M+++ +P+ T
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
LI+ CK G++ ++L + + C P V L+ + + + + + LLKRML
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
+ D ++Y++++ + ++ +A + M + +T I A+C+ GK + A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
+ + M G+ + T LI+G K + ++L E ++ ++L + + N ++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
L + K+ ML G P+ +TY+ L+ G + G+I ++ M+ P
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
+ YT +I+ LCQ G++EEA+K M+ + P Y +V ++ G +AL
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 363 EMVSEG 368
MV G
Sbjct: 676 AMVERG 681
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 154/350 (44%)
Query: 24 ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
+S++ LIH + + R + + + M E P+ T LI ALC G + ++ D
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 84 IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
+ + C P V T LI + ++ +IEE + ++M++ + I Y+ ++ K
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
+ A + M KR N + + C GK +A L++ M + GL P ++N+
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
LI+G + + + M + P C F +I C+ G A A+ L L L KG
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
S +E+T + LI G K G+ ++ L + + I T + ++ L + K++E
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ LVP V Y +LV + G+ + + E M G P+
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 150/342 (43%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
E A VCR + + S+I++N LI+ K R + + M + PN T
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
L+ LC+ G+ V +L R+ SP ++ LI + +E + LL M +
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
+ D + ++ I+ A K + A ML++G S + TT I C+ GK +A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
+++ + + + N++++ +K +++E L+ ++ L+PS + ++ L
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
G+ + +L L G PN Y+ +I G + G ++E KL M+ +SP
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
YT ++ GKL+ A + + M IY SL+
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 3/229 (1%)
Query: 147 ALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIE 206
A V Y M GF Y T + A C+ G E A M ++ G L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 207 GCAKAKRIEESLSYCEQMMSRKLL--PSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
G + + ++L + +MS+++ P+ +++ +I LCE G ++A G+ +KG
Sbjct: 239 GFCRGLNLRDALKVFD-VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
P+ TY+ LI G I + L+ EM + P + YT LI LC+ GK+EEA+
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ M + P V Y +L+ + + G A L M KP+
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 133/333 (39%), Gaps = 56/333 (16%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
++G SL ++ TLI V K + I + +++ ++ ++ L KG +++
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+ ML +I+ P V+ T+L+ +I+ I +L+ M + + Y++I+
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
+ +E A + M G S N YT + Y GK++ A ++ M G +
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Query: 196 PYDETFNLLIEGCAKAKR-IEES-LSYCEQMMSRKLLPSCSAFNEMIR------------ 241
D ++ L++G +++ I+ S S + R+ P C NE+I
Sbjct: 684 LNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPEC--INELISVVEQLGGCISGL 741
Query: 242 ------RLCECGNAKQANG----------------------------------MLTLALD 261
RLC+ G ++N ++TL L
Sbjct: 742 CIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLK 801
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
GF P+ ++ +I G KEG+ + +L E+
Sbjct: 802 SGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 183/369 (49%), Gaps = 1/369 (0%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
F+ A+ + +G S+I++N ++ + K + D ++++ M ++ PN +T
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNI 382
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI LC+ G+L T ++ D + P V ++ R+ + ++++E + + M K
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
D I + ++ K+ ++ A VYE+ML NS VYT+ I + +G+ E+ +
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
+ ++M N P + N ++ KA E+ + E++ +R+ +P +++ +I L
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
+ G A + + ++G + Y+ +I G+ K G++ + +L EM+ K PT+
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 304 PAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEE 363
Y S+I L + +L+EA F+ KS + V IY SL+ + G +A + EE
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 364 MVSEGLKPS 372
++ +GL P+
Sbjct: 683 LMQKGLTPN 691
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 158/347 (45%), Gaps = 1/347 (0%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
++ +N I K + D+ W+ + + N P+E T ++I LCK +L V+M
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+ + R P ++I+ + +E LL+R K I IAY+ I+ KM
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
++ AL V+EEM K+ + N Y I C GK++ A L M+ AGL P T
Sbjct: 357 GKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N++++ K+++++E+ + E+M + P F +I L + G A + LD
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
N I Y+ LI + G ++ K+Y +M ++ SP L + + + + G+ E+
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEG 368
F+ +K+ VP Y L+ ++ G + L M +G
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 181/406 (44%), Gaps = 35/406 (8%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
+ AF++ +++ G ++ + N ++ + KS + D +++ M + P+E T +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
LI L K G++ + +++ C IV TSLI R E+G + K M+ +N
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 124 -----------------------------------MIHDTIAYSLIVYAKVKMRNLESAL 148
+ D +YS++++ +K
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGC 208
++ M ++G ++ Y I +C+ GK+ +A L++EM+ G +P T+ +I+G
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 209 AKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNE 268
AK R++E+ E+ S+++ + ++ +I + G +A +L + KG +PN
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 269 ITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKI 328
T++ L+ K EI E L + M+ +P Y LI+ LC+ K +A +++
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 329 MKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
M+ + P Y +++ + GN A+A L + + G P ++
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 161/376 (42%), Gaps = 1/376 (0%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
+DV + + + F + ++ TLI + + +D++ ++Q M E P TLI
Sbjct: 152 GYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
K G++ + + +LD + +++ I + +++ + +
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D + Y+ ++ K L+ A+ ++E + K ++ Y T I Y GK +EA L+
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
+ G P +N ++ K +++E+L E+M + P+ S +N +I LC
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRA 390
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G A + G PN T + ++ K ++ E ++ EM+YK +P +
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
SLI L + G++++A K ++ M +Y SL+ G K + ++M++
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 367 EGLKPSTSYLCSASTC 382
+ P L + C
Sbjct: 511 QNCSPDLQLLNTYMDC 526
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 165/368 (44%), Gaps = 1/368 (0%)
Query: 5 EVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTL 64
++A+ +E G +++ ++I V+ K++R D +++H+ +N R P T+
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 65 ISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNM 124
I G+ +L+R K P VI ++ + + +++E + + + M +K+
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDA 373
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
+ Y++++ + L++A + + M K G N + C+ K++EA
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
+ +EM+ P + TF LI+G K R++++ E+M+ + + +I+
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
G + + + +++ SP+ + + K GE ++ ++ E++ + P
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
+Y+ LI L + G E + F MK V Y ++ + G KA L EEM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 365 VSEGLKPS 372
++G +P+
Sbjct: 614 KTKGFEPT 621
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 1/354 (0%)
Query: 25 SFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRI 84
S+N+L+ V+ + D + +I M P+ T ++ K +L+ D++ +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 85 HGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNL 144
+ P T+LI + + L ++M ++ ++ K +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 145 ESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
+SAL + +EM A+ +Y I ++ + GK++ A E+E GLKP + T+ +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
I KA R++E++ E + + +P A+N MI G +A +L KG
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
P+ I Y+ ++ K G++ E LK++ EM+ K +P L Y LI LC+ GKL+ A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 325 YFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
M+ L P V +V + +A + EEM + P CS
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 140/309 (45%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
++ R F S++ LIH + K+ + + ++ M E + +I CK G+
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ +L+ + K P V+ S+I + + +R++E +L + K + + + YS
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
++ K+ ++ A ++ EE++++G + N + + + + A + +I EA Q M+
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
P T+ +LI G K ++ ++ + ++M + + PS ++ MI L + GN +A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
+ G P+ Y+ +I G + + L+ E + + L+ +L
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Query: 314 CQCGKLEEA 322
+ LE+A
Sbjct: 843 HKNDCLEQA 851
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A+ + ++ +GF +++++ ++I + K DR D + +++ N +LI
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
K G++ +L+ + K +P + SL+ +++ E I E +V + M
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ + Y +++ K+R A V ++EM K+G ++ YTT I + G I EA L
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKL 229
+ G P +N +IEG + R ++ S E+ R L
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 1/258 (0%)
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
R + H +Y+ ++ + RN ++ + EM GF + + + K+
Sbjct: 91 RTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLR 150
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
E ++Q M +P + LI + + L+ +QM P+ F +I
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI 210
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
R + G A +L + + Y+ I + K G++ K ++E+E +
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270
Query: 301 PTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHL 360
P YTS+I LC+ +L+EA + F+ ++ + VP Y +++ + G +A L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 361 CEEMVSEGLKPST-SYLC 377
E ++G PS +Y C
Sbjct: 331 LERQRAKGSIPSVIAYNC 348
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 36/372 (9%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A D R + +RGF + ++S N ++ ++ D+ ++ R+ +L+ PN T TLI+
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLIN 294
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
CK G++ D+ + + P +I ++LI + + G L + L K +
Sbjct: 295 GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL 354
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D + +S + VK +L +A VVY+ ML +G S N YT I C+ G+I EA +
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
++ G++P T++ LI+G C+C
Sbjct: 415 GQILKRGMEPSIVTYSSLIDG-----------------------------------FCKC 439
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
GN + + + G+ P+ + Y L+ G +K+G + ++ +M +SI + +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
SLI C+ + +EA K F++M + + P V + +++ + + +G +AL L M
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 367 EGLKPSTSYLCS 378
GL+P C+
Sbjct: 560 MGLEPDALAYCT 571
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 183/407 (44%), Gaps = 38/407 (9%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
R++E AF + + +RG S++++++LI K + +Y+ M++ + YP + I
Sbjct: 406 RIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVVI 463
Query: 62 -RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
L+ L K G + + ++ G+ V+V SLI + R +E + + + M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGK-- 178
+ D ++ ++ + LE AL ++ M K G ++ Y T I A+C++ K
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 179 ---------------------------------IEEANCLMQEMENAGLKPYDETFNLLI 205
IE+A+ + ++P T+N +I
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
G +R++E+ E + P+ +I LC+ + A M ++ +KG
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
PN +TY L+ ++K +I+ KL+ EM+ K ISP++ +Y+ +I LC+ G+++EA
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
F L+P V Y L+ + + G +A L E M+ G+KP
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 151/339 (44%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
AFD+ + +EQRG LI+++TLI K+ + +++ L + + I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
K G L T + R+ + SP V+ T LI + Q+ RI E + ++L++ M
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ YS ++ K NL S +YE+M+K G+ + +Y + + G + A
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
+M ++ FN LI+G + R +E+L M + P + F ++R
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G ++A + G P+ + Y LI + K + L+L+ M+ IS +
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
+I L +C ++E+A K+F + + P + Y +++
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 125/305 (40%), Gaps = 43/305 (14%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRND----LVWRIYQHMLENIRYPNEA 59
F+ A V R + G + +F T++ V R + L +R+++ LE P+
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE----PDAL 567
Query: 60 TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
TLI A CK + + + D + + S + V +I + + RIE+ +
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
+ M D + Y+ ++ +R L+ A ++E + F N+ T I C+ +
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687
Query: 180 EEA-------------------NCLM----------------QEMENAGLKPYDETFNLL 204
+ A CLM +EM+ G+ P +++++
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747
Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
I+G K R++E+ + Q + KLLP A+ +IR C+ G +A + L G
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Query: 265 SPNEI 269
P+++
Sbjct: 808 KPDDL 812
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
R+FE+ L+ F + ++ LIHV+ K++ D R++ M E PN T
Sbjct: 657 RIFEL-------LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
L+ K ++ + + + K SP ++ + +I + + R++E + + +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
++ D +AY++++ K+ L A ++YE ML+ G + +
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 35/321 (10%)
Query: 60 TIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
T T++ +C G L +++ + C P V++ T+LI +Q R + M +LK M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAY------ 173
+ + D Y+ ++ K + ++ A EM++ G N+F Y FI Y
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 174 -----------------------------CEYGKIEEANCLMQEMENAGLKPYDETFNLL 204
C+ GK+ EA + M + G+ +T+ +L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 205 IEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGF 264
+ G K +++++ +M + + P ++ +I + GN ++A+ + +++G
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 265 SPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADK 324
+PN I Y+ L+GG+ + GEI++ +L EM K + P Y ++I C+ G L EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 325 YFKIMKSHSLVPGVDIYESLV 345
F MK LVP +Y +LV
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLV 739
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 197/459 (42%), Gaps = 84/459 (18%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
F A V + ++++G + + +N+LI ++K+ R D M+EN PN T
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 64 LISAL-----------------------------------CKGGQL----QTYVDMLDR- 83
IS CK G++ Y M+D+
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 84 IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRN 143
I G + V++N + + +++++ + + M K + D +Y +++ K+ N
Sbjct: 588 ILGDAKTYTVLMNG-----LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
++ A +++EM++ G + N +Y +G +C G+IE+A L+ EM GL P T+
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLP-------------------------------- 231
+I+G K+ + E+ ++M + L+P
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 232 --SCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS----PNEITYSHLIGGYAKEGEIQ 285
S + FN +I + + G + +L +D F PN++TY+ +I KEG ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 286 EVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLV 345
+L+++M+ ++ PT+ YTSL++ + G+ E F + + P +Y ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 346 GIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTCRG 384
L++G KAL L ++M ++ L S STCR
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKL-SISTCRA 920
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 164/360 (45%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
++ G SL +++ LI + K D + M+ + I + K G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
++ + D + P SLI +E+ + +G LL M ++N++ Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
+V +L+ A + +EM+ G N +YTT I + + + +A +++EM+ G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
+ P +N LI G +KAKR++E+ S+ +M+ L P+ + I E A+
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
+ + G PN++ + LI Y K+G++ E Y M + I YT L++ L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ K+++A++ F+ M+ + P V Y L+ + GN KA + +EMV EGL P+
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 168/373 (45%), Gaps = 22/373 (5%)
Query: 28 TLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGK 87
L+ + + +R DL W +Y+ M+E + T LI A C+ G +Q D+L + +
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 88 RCSPMVIVNTSLILR---------------------IIQEERIEEGMVLLKRMLRKNMIH 126
+ + V+ +L L+ + + +R+E+ LL M +
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D YSL++ +K RN ++A + EM+ G + ++Y I + G +E+A L
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
M +GL P + + LIEG + K + + +M R ++ S + +++ +C
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G+ A ++ + G PN + Y+ LI + + + +++ EM+ + I+P + Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
SLI L + +++EA + M + L P Y + + ++E A A +EM
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 367 EGLKPSTSYLCSA 379
G+ P+ LC+
Sbjct: 551 CGVLPN-KVLCTG 562
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 150/352 (42%), Gaps = 35/352 (9%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+++R +S ++ T++ + S D + I + M+ + PN TLI + +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ +L + + +P + SLI+ + + +R++E L M+ + + Y
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI-------------- 179
+ ++ SA +EM + G N + T I YC+ GK+
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 180 ---------------------EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL 218
++A + +EM G+ P ++ +LI G +K ++++
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 219 SYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGY 278
S ++M+ L P+ +N ++ C G ++A +L KG PN +TY +I GY
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 279 AKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
K G++ E +L+ EM+ K + P YT+L+ C+ +E A F K
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 141/352 (40%), Gaps = 45/352 (12%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A ++ R + +G + + S+ LI+ +K I+ M+E PN L+
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
C+ G+++ ++LD + K P + ++I + + E L M K ++
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D+ Y+ +V ++ ++E A+ ++ K+G ++++ + I ++GK E ++
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 187 QEMENAGL----KPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
+ + KP D T+N++I+ K +E + QM + L+P+ + ++
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Query: 243 LCECG----------------------------NAKQANGMLTLAL---DKGFSPNEI-- 269
+ G NA GM T AL D+ F+ N +
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Query: 270 -------TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLC 314
T L+ G+AK GE++ K+ M P LI+ C
Sbjct: 910 GCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 34/239 (14%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDL----VWRIYQHMLENIRYPNEATIRTLISALCKG 71
++G + S FN LI+ V K + +L + R+ + PN+ T +I LCK
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
G L+ ++ ++ P VI TSL+ + R E + + + D I Y
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
S+I+ A +K ALV+ ++M F+ N+ +
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQM----FAKNAV--------------------------D 908
Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
G K T L+ G AK +E + E M+ + +P + E+I C N +
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 72/194 (37%), Gaps = 37/194 (19%)
Query: 199 ETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTL 258
++F+ L E++LS E+M+ R P ++ ++R C
Sbjct: 98 DSFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIVR----CSQEFV------- 145
Query: 259 ALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGK 318
G S + + + L GY +G I+E + ++ + P L L+ +L + +
Sbjct: 146 ----GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR 201
Query: 319 LEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKA---------------------KA 357
L+ +K M ++V V Y L+ H GN A
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261
Query: 358 LHLCEEMVSEGLKP 371
L L E M+ +GL P
Sbjct: 262 LKLKESMICKGLVP 275
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 6/348 (1%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
++SFN+L + +K D V+ +Y ++ PN T T I CK G+LQ +
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+ SP V+ T LI + +E + L K M R M + + Y+ ++ K
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
++ A +Y M++ NS VYTT I + + G + A + +M N G++ +
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
++I G +++E+ E M L+P F M+ + G K A M ++
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
+GF P+ + S +I G AK G++ E + +Y+ +E YT LI +LC+ G E
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIE----KANDVMYTVLIDALCKEGDFIE 421
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
++ F + LVP +Y S + ++GN A L MV EGL
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL 469
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 7/362 (1%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+++ S ++++F LI K+ ++ +Y+ M N T LI CK G+
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+Q +M R+ R P +V T++I Q + M L +ML + M D AY +
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
I+ L+ A + E+M K + ++TT + AY + G+++ A + ++ G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSY-CEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
+P + +I+G AK ++ E++ Y C + + + + +I LC+ G+ +
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM------YTVLIDALCKEGDFIEV 422
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+ + + G P++ Y+ I G K+G + + KL M + + L AYT+LI
Sbjct: 423 ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG 482
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
L G + EA + F M + + P +++ L+ + ++GN A A L +M GL +
Sbjct: 483 LASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTA 542
Query: 373 TS 374
S
Sbjct: 543 VS 544
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 171/355 (48%), Gaps = 4/355 (1%)
Query: 27 NTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHG 86
N IH + S+ L + +++ P+ ++ +++S +CK GQ++ D++ +
Sbjct: 25 NKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPR 84
Query: 87 KRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMI---HDTIAYSLIVYAKVKMRN 143
C P VI SLI + I ++L+ + + D ++++ + KM+
Sbjct: 85 FGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKM 144
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
L+ V MLK S N Y+T+I +C+ G+++ A M+ L P TF
Sbjct: 145 LDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTC 203
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
LI+G KA +E ++S ++M ++ + + +I C+ G ++A M + ++
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263
Query: 264 FSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEAD 323
PN + Y+ +I G+ + G+ +K +M + + + AY +IS LC GKL+EA
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 324 KYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCS 378
+ + M+ LVP + I+ +++ + + G A+++ +++ G +P L +
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 169/355 (47%), Gaps = 5/355 (1%)
Query: 20 SLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVD 79
S ++++++T I KS L + + M + PN T LI CK G L+ V
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 80 MLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV 139
+ + R S V+ T+LI ++ ++ + RM+ + +++ Y+ I+
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 140 KMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDE 199
+ + ++A+ +ML +G + Y I C GK++EA ++++ME + L P
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 200 TFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLA 259
F ++ K+ R++ +++ +++ R P A + MI + + G +A ++
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFC 397
Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
++K N++ Y+ LI KEG+ EV +L+ ++ + P YTS I+ LC+ G L
Sbjct: 398 IEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454
Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
+A K M L+ + Y +L+ KG +A + +EM++ G+ P ++
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 5/228 (2%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A ++ +E+ ++ F T+++ KS R +Y ++E P+ + T+I
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
+ K GQL + ++ ++ T LI + +E E L ++ ++
Sbjct: 382 GIAKNGQLHEAI-----VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D Y+ + K NL A + M++ G + YTT I G + EA +
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
EM N+G+ P F+LLI K + + M R L+ + S
Sbjct: 497 DEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 214 IEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSH 273
+ E+L + ++ LP N+ I +L + L + +G++P+ +++
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 274 LIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK-SH 332
++ K G+++ + + M P + +Y SLI C+ G + A + ++ SH
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 333 SLVPGVDI 340
+ DI
Sbjct: 122 GFICKPDI 129
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 184/408 (45%), Gaps = 40/408 (9%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
FE+ F+ + G+ LS +S L+ + K +R+ V +Y+ M+ PN T
Sbjct: 169 FELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNV 228
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLI---LRIIQEERIEEGMVLLKRML 120
+I+ALCK G++ D+++ + CSP V+ +LI ++ ++ + +LK M+
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ + +++++ K NL ++ V++EML + N Y + I C GKI
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESL---------------------- 218
EA + +M +AG++P T+N LI G K ++E+L
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 219 -SYC------------EQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
+YC E+M ++P +N +I LC GN + A + KG
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467
Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
P+ +T+ L+ GY ++GE ++ L EM + P Y ++ C+ G L+ A
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 326 FKIM-KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
M K L V Y L+ + +KG A L EM+ +GL P+
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 177/384 (46%), Gaps = 30/384 (7%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWR---IYQHMLENIRYPNEATIRT 63
A DV ++ G S +++S+NTLI K N +++ + + M+EN PN T
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 64 LISALCKG----GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRM 119
LI K G ++ + +MLD+ P VI SLI + +I E + + +M
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQ----DVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 120 LRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKI 179
+ + + I Y+ ++ K L+ AL ++ + +G + +Y I AYC+ GKI
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 180 EEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEM 239
++ L +EME G+ P T+N LI G + IE + +Q+ S K LP F+ +
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHIL 476
Query: 240 IRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEY-KS 298
+ C G +++A +L G P +TY+ ++ GY KEG ++ + +ME +
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 299 ISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKAL 358
+ + +Y L+ Q GKLE+A+ M LVP YE +
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK------------- 583
Query: 359 HLCEEMVSEGLKPST-SYLCSAST 381
EEMV +G P +L + ST
Sbjct: 584 ---EEMVDQGFVPDIEGHLFNVST 604
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 10/290 (3%)
Query: 89 CSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESAL 148
C P++I +++E R + + K M+R+ + + +++++ A K + A
Sbjct: 191 CKPLMIA-------LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 149 VVYEEMLKRGFSANSFVYTTFIGAYCEYG---KIEEANCLMQEMENAGLKPYDETFNLLI 205
V E+M G S N Y T I YC+ G K+ +A+ +++EM + P TFN+LI
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 206 EGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFS 265
+G K + S+ ++M+ + + P+ ++N +I LC G +A M + G
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 266 PNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKY 325
PN ITY+ LI G+ K ++E L ++ ++ + PT Y LI + C+ GK+++
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 326 FKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTSY 375
+ M+ +VP V Y L+ GN A L +++ S+GL ++
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTF 473
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 158/355 (44%), Gaps = 19/355 (5%)
Query: 40 DLVWRIYQHMLENIRYPNEATIRTLISALCKGG---QLQTY---VDMLDRIHGKRCSPMV 93
+L +++ + RY + IR+ + + G Q+ + + M D + C +
Sbjct: 102 ELTFKLLHSLANAKRY---SKIRSFLDGFVRNGSDHQVHSIFHAISMCDNV----CVNSI 154
Query: 94 IVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEE 153
I + L+L R E G KR ++ ++ A +K VY+E
Sbjct: 155 IADM-LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 154 MLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAK--- 210
M++R N F + I A C+ GK+ +A +M++M+ G P ++N LI+G K
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 211 AKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEIT 270
++ ++ + ++M+ + P+ + FN +I + N + + LD+ PN I+
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 271 YSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMK 330
Y+ LI G G+I E + + +M + P L Y +LI+ C+ L+EA F +K
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 331 SHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST-SYLC-SASTCR 383
VP +Y L+ + + G L EEM EG+ P +Y C A CR
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDML 81
++IS+N+LI+ + + + M+ PN T LI+ CK L+ +DM
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 82 DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKM 141
+ G+ P + LI + +I++G L + M R+ ++ D Y+ ++ +
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
N+E+A +++++ +G + + + YC G+ +A L++EM GLKP T+
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 202 NLLIEGCAKAKRIEESLSYCEQM-MSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLAL 260
N++++G K ++ + + QM R+L + +++N +++ + G + AN +L L
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 261 DKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKS 298
+KG PN ITY + +G + ++ + + KS
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 169/357 (47%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
GF L++F +L++ +R + ++ +L PN T TLI LCK L
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
V++ +++ P V+ +L+ + + R + LL+ M+++ + + I ++ ++ A
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
VK+ L A +Y M++ + F Y + I C YG ++EA + ME G P
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
+ + LI G K+KR+E+ + +M + ++ + + +I+ C G A +
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+ P+ TY+ L+ G G++++ L ++ M + + + YT +I +C+ G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 374
K+E+A F + S + P V Y +++ +G +A L ++M +G P+ S
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 153/325 (47%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
GF +++++ TLI + K+ + ++ M N PN T L++ LC+ G+
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+L + +R P VI T+LI ++ ++ E L M++ ++ D Y ++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
L+ A ++ M + G N +YTT I +C+ ++E+ + EM G+
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T+ +LI+G R + + QM SR+ P +N ++ LC G ++A +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
+ N +TY+ +I G K G++++ L+ + K + P + YT++IS C+ G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYE 342
+ EAD FK MK +P +Y+
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVYK 507
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%)
Query: 73 QLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYS 132
Q +D+ R+ R P +I T L+ I + R + + L ++M + +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 133 LIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
++++ A +M+K GF + +T+ + YC + +IE+A L ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
G KP T+ LI K + + ++ QM + P+ +N ++ LCE G A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+L + + PN IT++ LI + K G++ E +LY M S+ P + Y SLI+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
LC G L+EA + F +M+ + P IY +L+ + + + EM +G+ +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 373 T 373
T
Sbjct: 363 T 363
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 140/343 (40%), Gaps = 4/343 (1%)
Query: 30 IHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRC 89
+H + +D DL + M+ + P+ L+S + K + + + +++
Sbjct: 59 LHNLQFNDALDL----FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGI 114
Query: 90 SPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALV 149
P++ ++ + + L +M++ D + ++ ++ +E A+
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA 174
Query: 150 VYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCA 209
+++++L GF N YTT I C+ + A L +M G +P T+N L+ G
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 210 KAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEI 269
+ R ++ MM R++ P+ F +I + G +A + + + P+
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
Query: 270 TYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIM 329
TY LI G G + E +++Y ME P YT+LI C+ ++E+ K F M
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 330 KSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
+V Y L+ + G A + +M S P
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 119/260 (45%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKG 71
R + +R ++I+F LI K + +Y M++ YP+ T +LI+ LC
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 72 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131
G L M + C P ++ T+LI + +R+E+GM + M +K ++ +TI Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191
++++ + + A V+ +M R + Y + C GK+E+A + + M
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 192 AGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQ 251
+ T+ ++I+G K ++E++ + S+ + P+ + MI C G +
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 252 ANGMLTLALDKGFSPNEITY 271
A+ + + GF PNE Y
Sbjct: 487 ADSLFKKMKEDGFLPNESVY 506
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 159/339 (46%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
GF L++ FN L++ K +++ + + P + TLI+ CK G L
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
+ ++ R P V ++LI + +E +++ L M ++ +I + + ++ +++
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
+ ++ Y++ML +G + +Y T + +C+ G + A ++ M GL+P
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
T+ LI+G + +E +L ++M + F+ ++ +C+ G A L
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
L G P+++TY+ ++ + K+G+ Q KL EM+ P++ Y L++ LC+ G
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAK 356
+++ AD M + +VP Y +L+ H N +K
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 138/281 (49%)
Query: 93 VIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYE 152
V V L+ + +E I + + + ++++ ++++ ++ K+ NL+ +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 153 EMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAK 212
+M K + F Y+ I A C+ K++ A+ L EM GL P D F LI G ++
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359
Query: 213 RIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYS 272
I+ ++M+S+ L P +N ++ C+ G+ A ++ + +G P++ITY+
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 273 HLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSH 332
LI G+ + G+++ L++ EM+ I +++L+ +C+ G++ +A++ + M
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 333 SLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ P Y ++ +KG+ L +EM S+G PS
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 38/303 (12%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
+RG + + F TLIH +++ DL+ YQ ML P+ TL++ CK G L
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL- 396
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+ I +GM+ R+ + D I Y+ ++
Sbjct: 397 ----------------------------VAARNIVDGMI------RRGLRPDKITYTTLI 422
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
+ ++E+AL + +EM + G + ++ + C+ G++ +A ++EM AG+K
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P D T+ ++++ K + ++M S +PS +N ++ LC+ G K A+ +
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
L L+ G P++ITY+ L+ G+ + K Y + I L +Y S+++ L +
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEGHHRHANSS---KRYIQKPEIGIVADLASYKSIVNELDR 599
Query: 316 CGK 318
K
Sbjct: 600 ASK 602
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 260 LDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKL 319
LD GF N ++ L+ + KEG I + K++ E+ +S+ PT+ ++ +LI+ C+ G L
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 320 EEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALH-LCEEMVSEGLKPS 372
+E + M+ P V Y +L+ L K NK H L +EM GL P+
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINA-LCKENKMDGAHGLFDEMCKRGLIPN 344
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 167/370 (45%), Gaps = 35/370 (9%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
L E AF++ + +GFS + ++NT+I+ + K + + ++ ML + P+ T R
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
+L+ CK G +++ E++ M +
Sbjct: 345 SLLMEACKKGD-----------------------------VVETEKV------FSDMRSR 369
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
+++ D + +S ++ + NL+ AL+ + + + G ++ +YT I YC G I A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
L EM G T+N ++ G K K + E+ +M R L P +I
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
C+ GN + A + +K + +TY+ L+ G+ K G+I +++ +M K I PT
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
+Y+ L+++LC G L EA + + M S ++ P V I S++ + GN + E
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 363 EMVSEGLKPS 372
+M+SEG P
Sbjct: 610 KMISEGFVPD 619
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 37/352 (10%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
L +GF++S+ + N LI + + +L W +YQ + + N T+ +++ALCK G+
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
++ L ++ K P D + Y+
Sbjct: 251 MEKVGTFLSQVQEKGVYP-----------------------------------DIVTYNT 275
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
++ A +E A + M +GFS + Y T I C++GK E A + EM +G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 194 LKPYDETF-NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQA 252
L P T+ +LL+E C K +E + + M SR ++P F+ M+ GN +A
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSD-MRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 253 NGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISS 312
+ G P+ + Y+ LI GY ++G I + L EM + + + Y +++
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 313 LCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
LC+ L EADK F M +L P L+ H + GN A+ L ++M
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/364 (19%), Positives = 169/364 (46%), Gaps = 2/364 (0%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+ R L+ F++++ + T+S D + + E P+ LI C+ G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ +++ + + + C+ V+ +++ + + + + E L M + + D+ ++
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
++ K+ NL++A+ ++++M ++ + Y T + + + G I+ A + +M +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
+ P ++++L+ + E+ ++M+S+ + P+ N MI+ C GNA
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK--SISPTLPAYTSLIS 311
L + +GF P+ I+Y+ LI G+ +E + + L +ME + + P + Y S++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 312 SLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKP 371
C+ +++EA+ + M + P Y ++ + + N +A + +EM+ G P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 372 STSY 375
+
Sbjct: 726 DDKF 729
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 160/362 (44%), Gaps = 23/362 (6%)
Query: 12 RYLEQRGFSL-----SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
R+++Q GF + +S + +IH++ +S R M+ + +L S
Sbjct: 97 RFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDS 156
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
G + D+L R + +Q ++ E + K
Sbjct: 157 TFSNCGSNDSVFDLLIRTY------------------VQARKLREAHEAFTLLRSKGFTV 198
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
A + ++ + V++ +E A VY+E+ + G N + + A C+ GK+E+ +
Sbjct: 199 SIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL 258
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
+++ G+ P T+N LI + +EE+ M + P +N +I LC+
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
G ++A + L G SP+ TY L+ K+G++ E K++ +M + + P L +
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 307 TSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVS 366
+S++S + G L++A YF +K L+P IY L+ + KG + A++L EM+
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 367 EG 368
+G
Sbjct: 439 QG 440
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
+ VA ++ + Q+G ++ ++++NT++H + K +++ M E +P+ T+
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 63 TLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK 122
LI CK G LQ +++ ++ KR V+ +L+ + I+ + M+ K
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
++ I+YS++V A +L A V++EM+ + + + I YC G +
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRK--LLPSCSAFNEMI 240
+++M + G P ++N LI G + + + ++ ++M + L+P +N ++
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSIS 300
C K+A +L +++G +P+ TY+ +I G+ + + E +++ EM + S
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 301 P 301
P
Sbjct: 725 P 725
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 18/316 (5%)
Query: 75 QTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRK---------NMI 125
Q +VD L H + +++I +++ R+ + L RM+R+ N +
Sbjct: 96 QRFVDQLG-FHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSL 154
Query: 126 HDTIA--------YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYG 177
T + + L++ V+ R L A + + +GF+ + IG+ G
Sbjct: 155 DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG 214
Query: 178 KIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFN 237
+E A + QE+ +G+ T N+++ K ++E+ ++ Q+ + + P +N
Sbjct: 215 WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274
Query: 238 EMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYK 297
+I G ++A ++ KGFSP TY+ +I G K G+ + +++ EM
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
+SP Y SL+ C+ G + E +K F M+S +VP + + S++ + GN KA
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 358 LHLCEEMVSEGLKPST 373
L + GL P
Sbjct: 395 LMYFNSVKEAGLIPDN 410
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 21/255 (8%)
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKR-GFSANSFVYTTFIGAYCEYGKIEE 181
N H +++ S +++ V+ L A M++R G S ++E
Sbjct: 108 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVS-----------------RLEI 150
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
N L N G D F+LLI +A+++ E+ + S+ S A N +I
Sbjct: 151 VNSLDSTFSNCG--SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
L G + A G+ G N T + ++ K+G++++V +++ K + P
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
+ Y +LIS+ G +EEA + M PGV Y +++ + G +A +
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 362 EEMVSEGLKP-STSY 375
EM+ GL P ST+Y
Sbjct: 329 AEMLRSGLSPDSTTY 343
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 172/368 (46%), Gaps = 1/368 (0%)
Query: 2 RLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATI 61
RL + + + + + + G ++ +N L+H +KS + ++ M E +P+ T
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241
Query: 62 RTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
TLIS CK + + DR+ +P ++ S I +E R+ E L R ++
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIK 300
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
++ + + Y+ ++ +M +++ AL + E M RGFS Y + + CE G+I E
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
AN L+ EM ++P + T N LI K + + ++ ++M+ L ++ +I
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
C+ + A L ++KGFSP TYS L+ G+ + + E+ KL E E + +
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLC 361
+ Y LI +C+ +++ A F+ M+ LV I+ ++ + G +A L
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALF 540
Query: 362 EEMVSEGL 369
+ M + L
Sbjct: 541 DVMYNRRL 548
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 34/335 (10%)
Query: 69 CKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDT 128
K G + + + ++I P + T L+ ++++ + + K+M++ ++ +
Sbjct: 144 AKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANI 203
Query: 129 IAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQE 188
Y+++V+A K + E A + EM ++G + F Y T I YC+ EA +
Sbjct: 204 HVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDR 263
Query: 189 MENAGLKPYDETFNLLIEGCAKAKR----------------------------------I 214
ME +G+ P T+N I G ++ R I
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 215 EESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHL 274
+E+L E M SR P +N ++R+LCE G ++AN +LT K P+ IT + L
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 275 IGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSL 334
I Y K ++ +K+ +M + + +Y +LI C+ +LE A + M
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 335 VPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
PG Y LV + + + L EE GL
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 130 AYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEM 189
A ++++ + VK R ++ ++++M+K G AN VY + A + G E+A L+ EM
Sbjct: 170 ACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEM 229
Query: 190 ENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNA 249
E G+ P T+N LI K E+LS ++M + P+ +N I G
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 250 KQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSL 309
++A + D + N +TY+ LI GY + +I E L+L ME + SP + Y S+
Sbjct: 290 REATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI 348
Query: 310 ISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGL 369
+ LC+ G++ EA++ M + P +L+ + + + A+ + ++M+ GL
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408
Query: 370 K 370
K
Sbjct: 409 K 409
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A V +E+ G + +++++N+ IH ++ R R+++ + +++ N T TLI
Sbjct: 257 ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVT-ANHVTYTTLID 315
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
C+ + + + + + + SP V+ S++ ++ ++ RI E LL M K +
Sbjct: 316 GYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEP 375
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
D I + ++ A K+ ++ SA+ V ++M++ G + + Y I +C+ ++E A +
Sbjct: 376 DNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEEL 435
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
M G P T++ L++G + +E E+ R L + + +IRR+C+
Sbjct: 436 FSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKL 495
Query: 247 GNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAY 306
A + KG + + ++ + Y + G++ E L+ M + + L Y
Sbjct: 496 EQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Query: 307 TSLISS 312
S+ +S
Sbjct: 556 KSISAS 561
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 118/249 (47%), Gaps = 3/249 (1%)
Query: 125 IHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANC 184
+ ++ +I YAK M N ++VV+E++ G + T + + + +
Sbjct: 132 VSHVFSWLMIYYAKAGMIN--DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK 189
Query: 185 LMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLC 244
+ ++M G+ +N+L+ C+K+ E++ +M + + P +N +I C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 245 ECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLP 304
+ +A + G +PN +TY+ I G+++EG ++E +L+ E++ ++
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHV 308
Query: 305 AYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
YT+LI C+ ++EA + ++M+S PGV Y S++ E G +A L EM
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 365 VSEGLKPST 373
+ ++P
Sbjct: 369 SGKKIEPDN 377
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 166/360 (46%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+E G ++ +F I V+ ++ + + + I + M + P+ T LI ALC +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
L ++ +++ R P + +L+ R ++ M + + D + +++
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 134 IVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAG 193
+V A K N A + M +G N Y T I ++++A L ME+ G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 194 LKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQAN 253
+KP T+ + I+ K+ +L E+M ++ + P+ A N + L + G ++A
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 254 GMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSL 313
+ D G P+ +TY+ ++ Y+K GEI E +KL EM P + SLI++L
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 314 CQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPST 373
+ +++EA K F MK L P V Y +L+ + G +A+ L E MV +G P+T
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 149/321 (46%), Gaps = 2/321 (0%)
Query: 56 PNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVL 115
P T LI L + ++ D+ ++ C P V L+ + +I+E L
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 116 LKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML-KRGFSANSFVYTTFIGAYC 174
K M +TI +++++ VK N++ AL +Y +++ R FS + Y I
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
+ G++ EA L + M + G +P +N+LI G KA + + + ++M+ + P
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
++ ++ LC G + + G +P+ + Y+ +I G K ++E L L+ EM
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 295 EY-KSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGN 353
+ + I+P L Y SLI +L G +EEA K + ++ L P V + +L+ + G
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 354 KAKALHLCEEMVSEGLKPSTS 374
A + + MV+ G P+T
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTG 1103
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 173/390 (44%), Gaps = 10/390 (2%)
Query: 4 FEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRT 63
F AFD + +G +L ++NTLI + + R D ++ +M P T
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIV 438
Query: 64 LISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKN 123
I K G + ++ +++ K +P ++ + + + + R E + +
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 124 MIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEAN 183
++ D++ Y++++ K+ ++ A+ + EM++ G + V + I + +++EA
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 184 CLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRL 243
+ M+ LKP T+N L+ G K +I+E++ E M+ + P+ FN + L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 244 CECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTL 303
C+ A ML +D G P+ TY+ +I G K G+++E + +++M+ K + P
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 677
Query: 304 PAYTSLISSLCQCGKLEEADKYF-KIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
+L+ + + +E+A K + + + P +E L+G L + A+ E
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 363 EMVSEG--------LKPSTSYLCSASTCRG 384
+V+ G L P Y C + G
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSG 767
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 155/343 (45%), Gaps = 4/343 (1%)
Query: 24 ISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDR 83
+++ TL+ + + D V + + M ++ P+ T L+ ALCK G D LD
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 84 IHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKV--KM 141
+ + P + +LI +++ R+++ + L M +++ AY+ IV+ K
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM--ESLGVKPTAYTYIVFIDYYGKS 446
Query: 142 RNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETF 201
+ SAL +E+M +G + N + + + G+ EA + +++ GL P T+
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 202 NLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALD 261
N++++ +K I+E++ +MM P N +I L + +A M +
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 262 KGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEE 321
P +TY+ L+ G K G+IQE ++L+ M K P + +L LC+ ++
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 322 ADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEM 364
A K M VP V Y +++ ++ G +A+ +M
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 146/343 (42%), Gaps = 35/343 (10%)
Query: 3 LFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIR 62
+ E+A DV ++ G + ++N L+ KS + D ++ +Y+ M + N T
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 63 TLISALCKGGQLQTYVDML-DRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLR 121
+IS L K G + +D+ D + + SP LI + + R+ E L + ML
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 122 KNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEE 181
+ Y++++ K ++A +++ M+K G + Y+ + C G+++E
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 182 ANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIR 241
+E++ +GL P +NL+I G K+ R+EE+L FNEM
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL---------------FNEM-- 1022
Query: 242 RLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISP 301
+G +P+ TY+ LI G ++E K+Y E++ + P
Sbjct: 1023 -----------------KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 302 TLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESL 344
+ + +LI GK E A ++ M + P YE L
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 167/391 (42%), Gaps = 41/391 (10%)
Query: 22 SLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ-TYVDM 80
+ ++NT+I + K+ + + H ++ + YP+ T+ TL+ + K ++ Y +
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFF-HQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 81 LDRIHGKRCSPMVIVNTSLILRIIQEERIE----------------EGMVLLKRMLRKNM 124
+ ++ P + LI I+ E I+ +G +L ++R +
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 125 IHDTIA---------------------YSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
H+ ++ Y+L++ ++ +E A V+ ++ G +
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLS-YCE 222
Y + AY + GKI+E L +EM + T N++I G KA ++++L Y +
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 223 QMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEG 282
M R P+ + +I L + G +A + LD G PN Y+ LI G+ K G
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 283 EIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYE 342
E L+ M + + P L Y+ L+ LC G+++E YFK +K L P V Y
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 343 SLVGIHLEKGNKAKALHLCEEM-VSEGLKPS 372
++ + +AL L EM S G+ P
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 157/397 (39%), Gaps = 72/397 (18%)
Query: 12 RYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHM-LENIRYPNEATIRTLISALCK 70
R + + GF L+ S+N LIH++ KS +Y+ M LE R
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR---------------- 220
Query: 71 GGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIA 130
LQTY +SL++ + + I+ M LLK M + +
Sbjct: 221 -PSLQTY-------------------SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260
Query: 131 YSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEME 190
+++ + + + A + + M G + YT I A C K++ A + ++M+
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 191 NAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAK 250
KP T+ L++ + + ++ + +M +P F ++ LC+ GN
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 251 QANGMLTLALDKGFSPNEITYSHLIGG--------------------------------- 277
+A L + D+G PN TY+ LI G
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 278 --YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 335
Y K G+ L+ + +M+ K I+P + A + + SL + G+ EA + F +K LV
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 336 PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
P Y ++ + + G +A+ L EM+ G +P
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 14 LEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQ 73
+ R FS + ++ LI ++KS R ++++ ML+ PN A LI+ K G+
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 74 LQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSL 133
+ R+ + P + + L+ + R++EG+ K + + D + Y+L
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 134 IVYAKVKMRNLESALVVYEEM-LKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENA 192
I+ K LE ALV++ EM RG + + + Y + I G +EEA + E++ A
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 193 GLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
GL+P TFN LI G + + + E + + + M++ P+ + ++ R
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNR 1111
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 121/302 (40%), Gaps = 35/302 (11%)
Query: 106 EERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFV 165
+ ++EE + M ++ + DT Y I + L+ A +M + GF N++
Sbjct: 131 DGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190
Query: 166 YTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMM 225
Y I + EA + + M G +P +T++ L+ G K + I+ + ++M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 226 SRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGG-------- 277
+ L P+ F IR L G +A +L D+G P+ +TY+ LI
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 278 ---------------------------YAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLI 310
++ ++ V + + EME P + +T L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 311 SSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLK 370
+LC+ G EA +M+ ++P + Y +L+ L AL L M S G+K
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 371 PS 372
P+
Sbjct: 431 PT 432
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%)
Query: 123 NMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEA 182
N++H T + ++ A LE V++ M KR ++ Y T + G +++A
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA 172
Query: 183 NCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRR 242
+++M G ++N LI K++ E++ +M+ PS ++ ++
Sbjct: 173 PYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG 232
Query: 243 LCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPT 302
L + + G+L G PN T++ I + G+I E ++ M+ + P
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
Query: 303 LPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCE 362
+ YT LI +LC KL+ A + F+ MK+ P Y +L+ + +
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 363 EMVSEGLKPS 372
EM +G P
Sbjct: 353 EMEKDGHVPD 362
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 166/355 (46%)
Query: 18 GFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTY 77
G+ +++ N+L++ +R + M+E P+ T TLI L +
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 78 VDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYA 137
V ++DR+ + C P ++ +++ + + + + LL +M + + + YS ++ +
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 138 KVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPY 197
K R+ + AL ++ EM +G N Y++ I C YG+ +A+ L+ +M + P
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 198 DETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLT 257
TF+ LI+ K ++ ++ E+M+ R + P+ ++ +I C +A ML
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 258 LALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCG 317
L + K PN +TY+ LI G+ K + + ++L+ EM + + YT+LI Q
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 318 KLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPS 372
+ A FK M S + P + Y L+ + G AKA+ + E + ++P
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 176/375 (46%), Gaps = 6/375 (1%)
Query: 1 MRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEAT 60
M F++ +E G S +L ++N LI+ + R L + M++ P+ T
Sbjct: 91 MNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150
Query: 61 IRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRML 120
+ +L++ C G ++ V ++D++ P + T+LI + + E + L+ RM+
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210
Query: 121 RKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIE 180
++ D + Y +V K + + AL + +M AN +Y+T I + C+Y +
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 181 EANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMI 240
+A L EMEN G++P T++ LI R ++ M+ RK+ P+ F+ +I
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 241 RRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYA---KEGEIQEVLKLYYEMEYK 297
+ G +A + + + PN TYS LI G+ + GE +++L+L M K
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL---MIRK 387
Query: 298 SISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNKAKA 357
P + Y +LI+ C+ ++++ + F+ M LV Y +L+ + + A
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Query: 358 LHLCEEMVSEGLKPS 372
+ ++MVS G+ P+
Sbjct: 448 QMVFKQMVSVGVHPN 462
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 144/311 (46%)
Query: 16 QRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQ 75
QRG L+++ +++ + K DL + M N T+I +LCK
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 76 TYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIV 135
+++ + K P VI +SLI + R + LL M+ + + + + +S ++
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 136 YAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLK 195
A VK L A +YEEM+KR N F Y++ I +C ++ EA +++ M
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 196 PYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGM 255
P T+N LI G KAKR+++ + +M R L+ + + +I + + A +
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 256 LTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQ 315
+ G PN +TY+ L+ G K G++ + + ++ ++ ++ P + Y +I +C+
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 316 CGKLEEADKYF 326
GK + YF
Sbjct: 511 AGKWKMGGIYF 521
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 4/318 (1%)
Query: 55 YPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMV 114
Y +RT +S + +L + + + R P +I + L+ I + + + +
Sbjct: 44 YDYREVLRTGLSDI----ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS 99
Query: 115 LLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYC 174
++M + H+ Y++++ + L AL + +M+K G+ + + + +C
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159
Query: 175 EYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCS 234
+I +A L+ +M G KP TF LI G + E+++ ++M+ R P
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 219
Query: 235 AFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGEIQEVLKLYYEM 294
+ ++ LC+ G+ A +L N + YS +I K + L L+ EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 295 EYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIHLEKGNK 354
E K + P + Y+SLIS LC G+ +A + M + P + + +L+ ++KG
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 355 AKALHLCEEMVSEGLKPS 372
KA L EEM+ + P+
Sbjct: 340 VKAEKLYEEMIKRSIDPN 357
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 119/246 (48%)
Query: 7 AFDVCRYLEQRGFSLSLISFNTLIHVVTKSDRNDLVWRIYQHMLENIRYPNEATIRTLIS 66
A ++ +E +G ++I++++LI + R R+ M+E PN T LI
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 67 ALCKGGQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIH 126
A K G+L + + + + P + +SLI +R+ E +L+ M+RK+ +
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 127 DTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLM 186
+ + Y+ ++ K + ++ + ++ EM +RG N+ YTT I + + + A +
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 187 QEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCEC 246
++M + G+ P T+N+L++G K ++ +++ E + + P +N MI +C+
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Query: 247 GNAKQA 252
G K
Sbjct: 512 GKWKMG 517
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 35/265 (13%)
Query: 144 LESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNL 203
+ A+ + ++M++ G+ ++ +TT I + K EA L+ M G +P T+
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 204 LIEGCAKAKRIEESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKG 263
++ G K + +L+ +M + K+ + ++ +I LC+ + A + T +KG
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 264 FSPNEITYSHLIG-----------------------------------GYAKEGEIQEVL 288
PN ITYS LI + K+G++ +
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 289 KLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYESLVGIH 348
KLY EM +SI P + Y+SLI+ C +L EA + ++M +P V Y +L+
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 349 LEKGNKAKALHLCEEMVSEGLKPST 373
+ K + L EM GL +T
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNT 428
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 35/279 (12%)
Query: 104 IQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEMLKRGFSANS 163
+ + +++ + L M + I +S ++ A KM + + E+M G S N
Sbjct: 54 LSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL 113
Query: 164 FVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIEESLSYCEQ 223
+ Y I +C ++ A L+ +M G +P T N L+ G RI ++++ +Q
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 224 MMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLIGGYAKEGE 283
M ++ G+ P+ +T++ LI G +
Sbjct: 174 M-----------------------------------VEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 284 IQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLVPGVDIYES 343
E + L M + P L Y ++++ LC+ G + A M++ + V IY +
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 344 LVGIHLEKGNKAKALHLCEEMVSEGLKPSTSYLCSASTC 382
++ + ++ AL+L EM ++G++P+ S +C
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,055,658
Number of Sequences: 539616
Number of extensions: 5272970
Number of successful extensions: 21130
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 14143
Number of HSP's gapped (non-prelim): 2767
length of query: 384
length of database: 191,569,459
effective HSP length: 119
effective length of query: 265
effective length of database: 127,355,155
effective search space: 33749116075
effective search space used: 33749116075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)