BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016682
(384 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0TC10|PANB_HELMI 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Heliobacterium
modesticaldum (strain ATCC 51547 / Ice1) GN=panB PE=3
SV=1
Length = 276
Score = 276 bits (707), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 188/269 (69%), Gaps = 6/269 (2%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
+++TL ++ K G+ + M+TAYDYP A +D + I+I LVGDS MVV G+D+T+P+T
Sbjct: 3 KKITLPQCKEMKKQGKRLRMITAYDYPFARLVDESEIEIILVGDSLGMVVLGYDSTVPVT 62
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPS 196
L+EM+ HC+ V RGA L+V D+PFG+Y S A+ A R+LKE G++A+K+EGG+
Sbjct: 63 LDEMIHHCKPVVRGAPNTLVVADMPFGSYNVSKEDAIRNANRMLKESGIEAVKVEGGTRM 122
Query: 197 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSV 256
T R +V+AGI VMGH+GLTPQ + LGGF+ QGK +A +++E ALAL+ G FS+
Sbjct: 123 APT-VRALVDAGIPVMGHIGLTPQTAAQLGGFKVQGKTEDAAQQLLEDALALESAGAFSI 181
Query: 257 VLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQF 316
V+ECVP +A T++L IPTIGIGAGP+C+GQVLV DLLG+ + + PKF KQ+
Sbjct: 182 VIECVPAGLARTITASLSIPTIGIGAGPYCNGQVLVIQDLLGI-----YDRFVPKFVKQY 236
Query: 317 ARVGDVINKALLEYKEEVTNGSFPGPSHS 345
A+ G I AL +Y EV +G FPGP HS
Sbjct: 237 AQTGPAIRAALNDYAREVADGVFPGPEHS 265
>sp|Q3A9L0|PANB_CARHZ 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=panB PE=3 SV=1
Length = 276
Score = 271 bits (693), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 190/268 (70%), Gaps = 6/268 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
RVT++ L++ + G+ I M+TAYDYPSA+ + AG ++ LVGDS MVV G+D+T+P+T+
Sbjct: 3 RVTVSSLKEMKEAGQKIAMITAYDYPSALFAEEAGAEVLLVGDSLGMVVLGYDSTVPVTM 62
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
EEML H +AV RG+KR ++V D+PF +Y++S A+ A R LKEGG A+KLEGG
Sbjct: 63 EEMLHHVKAVVRGSKRSMVVADMPFMSYQASYTDALYNAGRFLKEGGAQAVKLEGGGEIA 122
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
A+ +V AGI VMGH+GLTPQ+++ LGG++ QGK++ +A K+++ A AL + G F++V
Sbjct: 123 ELVAK-LVTAGIPVMGHIGLTPQSVNALGGYKVQGKDLKTAQKLLDDAKALADAGAFAIV 181
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LECVP +AA T ++ IPTIGIG+G C GQVLVYHD+LGM + ++ PKF K++A
Sbjct: 182 LECVPAALAAKITESIPIPTIGIGSGVNCDGQVLVYHDVLGM-----YPRMLPKFVKRYA 236
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ +I +A+ +Y +EV FP HS
Sbjct: 237 DLSSLIKEAIRQYVQEVKEQQFPEEKHS 264
>sp|Q9Y7B6|PANB_EMENI 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=panB PE=3 SV=1
Length = 349
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 193/295 (65%), Gaps = 5/295 (1%)
Query: 74 NPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTL 133
NP ++VT+ LR +K GEPITM+TA+D+PSA D+AG+D+ LVGDS AMV G T
Sbjct: 60 NPRKKVTMQTLRNLYKKGEPITMLTAHDFPSAHVADAAGMDMILVGDSLAMVALGMQDTS 119
Query: 134 PITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGG 193
+TL++MLVHCR+VAR A+ V DLP G+YE S QA+ +A+RI+KEG + +KLEGG
Sbjct: 120 EVTLDDMLVHCRSVARAAQSAFTVSDLPMGSYEVSPEQALQSAIRIVKEGRVQGVKLEGG 179
Query: 194 SPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGC 253
A + I AGI V+GH+GLTPQ + LGGFR QGK+ T A+K+++ ALA+QE G
Sbjct: 180 E-EMAPAIKRITTAGIPVVGHIGLTPQRQNALGGFRVQGKSTTDALKLLKDALAVQEAGA 238
Query: 254 FSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFC 313
F +V+E VPP +A+ T L +PTIGIGAG CSGQVLV D+ G + PKF
Sbjct: 239 FMIVIEAVPPEIASIVTQKLSVPTIGIGAGNGCSGQVLVQIDMTGNFP---PGRFLPKFV 295
Query: 314 KQFARVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFFNELQKLGFDK 368
KQ+A V + + + +Y+EEV + ++P H+ Y + + F + +L +K
Sbjct: 296 KQYANVWNEALQGIQQYREEVKSRAYPAEQHT-YPIPKEELVEFQKAVDELPEEK 349
>sp|Q2RM79|PANB_MOOTA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Moorella
thermoacetica (strain ATCC 39073) GN=panB PE=3 SV=1
Length = 269
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/268 (51%), Positives = 180/268 (67%), Gaps = 6/268 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
RVTL L+ + GE ITMVTAYDYPS++ D AG+D+ LVGDS MVV G+ +T+P+T+
Sbjct: 6 RVTLPQLQAMKERGERITMVTAYDYPSSLLADRAGMDMILVGDSLGMVVLGYSSTVPVTM 65
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
+EM+ H +AV R L+V DLPF +Y++S AV A R++KEGG DA+KLEGG +
Sbjct: 66 DEMIHHTKAVVRANPAALVVADLPFLSYQTSVPDAVYNAGRLIKEGGADAVKLEGGQ-AV 124
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ R IV AGI VMGH+GLTPQ+ LGGFR QG++ K+ A AL E G F++V
Sbjct: 125 VPTVRAIVNAGIPVMGHLGLTPQSAVQLGGFRVQGRSEAEGEKIAADAAALVEAGVFALV 184
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LECVP +A T+AL +PTIGIGAGP C GQVLVYHDLLG+ + PKF KQ+A
Sbjct: 185 LECVPADLARRITAALPVPTIGIGAGPDCDGQVLVYHDLLGLFD-----RFRPKFVKQYA 239
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ + AL +Y++EV G FP HS
Sbjct: 240 NLAEATVAALEKYRDEVRQGKFPDQEHS 267
>sp|A0PXQ3|PANB_CLONN 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
novyi (strain NT) GN=panB PE=3 SV=1
Length = 275
Score = 264 bits (675), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 184/273 (67%), Gaps = 7/273 (2%)
Query: 80 TLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEE 139
T+T ++ NGE +TM+TAYDY +A +D +GI+ LVGDS MV G++ TL +T+E+
Sbjct: 4 TVTTFQKAKNNGEKLTMLTAYDYSTAKLIDESGINGILVGDSLGMVCLGYEDTLSVTMED 63
Query: 140 MLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRIT 199
M+ H RAV+RG K L+VGD+PF +Y+SS AV A R++KEGG A+KLEGG+ + I
Sbjct: 64 MIHHTRAVSRGVKNTLVVGDMPFMSYQSSVYDAVVNAGRLIKEGGATAVKLEGGA-TVIE 122
Query: 200 AARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLE 259
+ IV A I VM H+GLTPQ+I+V GGF+ QGK+ A K++E A ++E G F++VLE
Sbjct: 123 QIKAIVNAQIPVMAHIGLTPQSINVFGGFKVQGKDEEKAQKLIEDAKKIEEAGAFAIVLE 182
Query: 260 CVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARV 319
CVP +A T A+ IPTIGIGAG C GQ+LVY D+LGM + ++PKF K+FA V
Sbjct: 183 CVPAKLAELITKAVSIPTIGIGAGAGCDGQILVYQDMLGMF-----SDMSPKFVKKFADV 237
Query: 320 GDVINKALLEYKEEVTNGSFPGPSHSPYKMSSS 352
G+++ Y +EV G+FP H +K+ S
Sbjct: 238 GELMKDGFKAYIKEVQEGTFPSKEHC-FKIDES 269
>sp|A1VBJ4|PANB_DESVV 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Desulfovibrio
vulgaris subsp. vulgaris (strain DP4) GN=panB PE=3 SV=1
Length = 307
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 182/280 (65%), Gaps = 7/280 (2%)
Query: 86 QKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEEMLVHCR 145
+K K + + M+TAYDY SA +D AG D+ LVGDS MV+ G + TL +TL+EML HCR
Sbjct: 27 RKAKGRQRLAMLTAYDYTSARIVDGAGADLILVGDSLGMVMLGREDTLSVTLDEMLHHCR 86
Query: 146 AVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRITAARGIV 205
AV RG + ++V D+PF TYE+ A+ R+ +E G+ A+KLEG P + R +V
Sbjct: 87 AVVRGTRHAMVVADMPFMTYETGVRDALLNGARLFRESGVRAVKLEGAGPV-LPQVRALV 145
Query: 206 EAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECVPPPV 265
+AGI VMGH+GLTPQ ++ +GGF+ QG+ +A+++ + ALALQE GCFS+VLECVP PV
Sbjct: 146 DAGIPVMGHLGLTPQRVAEMGGFKVQGRQAEAALRLFDDALALQEAGCFSLVLECVPAPV 205
Query: 266 AAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINK 325
A T+ L IPTIGIGAG C GQVLV HD+LG+ + +++P+F K++A + + +
Sbjct: 206 AEQVTARLHIPTIGIGAGAGCDGQVLVLHDMLGL-----YGELSPRFVKRYADLAGMAGE 260
Query: 326 ALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFFNELQKLG 365
A+ Y EV GSFP H+ + + F L K G
Sbjct: 261 AVARYAHEVREGSFPAAEHT-FGIDDGQFEAFMAALDKRG 299
>sp|Q729A6|PANB_DESVH 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Desulfovibrio
vulgaris (strain Hildenborough / ATCC 29579 / NCIMB
8303) GN=panB PE=3 SV=1
Length = 307
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 182/280 (65%), Gaps = 7/280 (2%)
Query: 86 QKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEEMLVHCR 145
+K K + + M+TAYDY SA +D AG D+ LVGDS MV+ G + TL +TL+EML HCR
Sbjct: 27 RKAKGRQRLAMLTAYDYTSARIVDGAGADLILVGDSLGMVMLGREDTLSVTLDEMLHHCR 86
Query: 146 AVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRITAARGIV 205
AV RG + ++V D+PF TYE+ A+ R+ +E G+ A+KLEG P + R +V
Sbjct: 87 AVVRGTRHAMVVADMPFMTYETGVRDALLNGARLFRESGVRAVKLEGAGPV-LPQVRALV 145
Query: 206 EAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECVPPPV 265
+AGI VMGH+GLTPQ ++ +GGF+ QG+ +A+++ + ALALQE GCFS+VLECVP PV
Sbjct: 146 DAGIPVMGHLGLTPQRVAEMGGFKVQGRQAEAALRLFDDALALQEAGCFSLVLECVPAPV 205
Query: 266 AAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINK 325
A T+ L IPTIGIGAG C GQVLV HD+LG+ + +++P+F K++A + + +
Sbjct: 206 AEQVTARLHIPTIGIGAGAGCDGQVLVLHDMLGL-----YGELSPRFVKRYADLAGMAGE 260
Query: 326 ALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFFNELQKLG 365
A+ Y EV GSFP H+ + + F L K G
Sbjct: 261 AVARYAHEVREGSFPAAEHT-FGIDDGQFEAFMAALDKRG 299
>sp|Q2LTJ5|PANB_SYNAS 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Syntrophus
aciditrophicus (strain SB) GN=panB PE=3 SV=2
Length = 272
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 182/273 (66%), Gaps = 6/273 (2%)
Query: 73 QNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTT 132
Q+ +++T + +R K GE ITM+TAYDY A LD G+++ LVGDS MVV G+++T
Sbjct: 4 QSKGRKITTSVIRGMKKKGEKITMLTAYDYAMASLLDEVGVEMLLVGDSLGMVVLGYEST 63
Query: 133 LPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEG 192
LP+T+ +ML H RAV+RGA ++V DLPF +Y+ S +AV A R L+E G A+KLEG
Sbjct: 64 LPVTMNDMLHHTRAVSRGANNAMVVADLPFMSYQCSVEEAVRNAGRFLQEAGAHAVKLEG 123
Query: 193 GSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVG 252
G + R V +GI V+GH+GLTPQ++ GGF+ QGK +A +++E A ++E G
Sbjct: 124 GREIAESVKRMTV-SGIPVVGHLGLTPQSVQQFGGFKVQGKGDAAAQRIMEDAKIIEEAG 182
Query: 253 CFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKF 312
FSVVLECVP P+A T L IPTIGIGAG C GQVLV +D+LG+ + + TPKF
Sbjct: 183 AFSVVLECVPAPLAQRITDDLAIPTIGIGAGAGCDGQVLVVNDMLGI-----YERFTPKF 237
Query: 313 CKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
K++A + D I A+ +Y EEV NG+FP HS
Sbjct: 238 VKKYANLSDNIRGAVKQYIEEVKNGTFPDQDHS 270
>sp|A0LLW3|PANB_SYNFM 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=panB PE=3 SV=1
Length = 282
Score = 261 bits (668), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/258 (51%), Positives = 176/258 (68%), Gaps = 8/258 (3%)
Query: 89 KNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEEMLVHCRAVA 148
K ++ +TAYDYP+A+ D +GID+ LVGDS AMVV GHD TL + + EML H AVA
Sbjct: 14 KGKRKLSELTAYDYPTALWADQSGIDMLLVGDSLAMVVLGHDDTLSVGMTEMLHHTSAVA 73
Query: 149 RGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRIT-AARGIVEA 207
RGAKR L++GD+PF +Y+ S +A+ A LKE A+KLEGG R+ + +VEA
Sbjct: 74 RGAKRALVIGDMPFMSYQVSVEEALYNAGLFLKEAKAQAVKLEGGR--RVAPQVKAMVEA 131
Query: 208 GIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECVPPPVAA 267
GI V GH+GLTPQ+ + GGF+ QGK +A ++E A L E GCFS+VLE +P VAA
Sbjct: 132 GIPVQGHLGLTPQSSAQFGGFKIQGKTAEAAKILIEDAQILAEAGCFSIVLEGIPSNVAA 191
Query: 268 AATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAL 327
T A+ +PTIGIGAGP C GQVLV HD+LG+ + + PKF K++A++G I +AL
Sbjct: 192 MVTEAIPVPTIGIGAGPDCDGQVLVIHDVLGL-----YDRFVPKFVKKYAQLGLTIKEAL 246
Query: 328 LEYKEEVTNGSFPGPSHS 345
+Y+EEV NG+FPGP H
Sbjct: 247 TKYREEVENGTFPGPEHE 264
>sp|Q5YZ95|PANB_NOCFA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Nocardia
farcinica (strain IFM 10152) GN=panB PE=3 SV=1
Length = 283
Score = 261 bits (668), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 180/284 (63%), Gaps = 9/284 (3%)
Query: 63 ENSVYGGPKPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSA 122
E YG +P P ++ + HLRQ +GE M+TAYDY SA + AGI + LVGDSA
Sbjct: 7 ETPAYGAAQPAQPRRKTRIPHLRQMKADGERWAMLTAYDYSSARLFEEAGIPVLLVGDSA 66
Query: 123 AMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKE 182
A VV+G+DTT+PIT++E++ R V RGA L+V DLPFGTYE S QA+ A R +KE
Sbjct: 67 ANVVYGYDTTVPITVDELIPLVRGVVRGAPHALVVADLPFGTYEGSAQQALAAATRFMKE 126
Query: 183 GGMDAIKLEGGSPSRITAARGIVE-AGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKV 241
GG A+KLEGG R+ ++ AGI VM H+G TPQ+++ LGGFR QG+ A ++
Sbjct: 127 GGAHAVKLEGG--ERVAEQIALLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRG-DGAEQL 183
Query: 242 VETALALQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQ 301
+ A+A+QE G FSVV+E VP +A T L IPTIGIGAGP C QVLV+ D+ G
Sbjct: 184 IADAIAVQEAGAFSVVMEMVPAELAGQVTRKLTIPTIGIGAGPDCDAQVLVWQDMAG--- 240
Query: 302 HPHHAKVTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ + T KF K+F +GD + A Y EV G+FPGP HS
Sbjct: 241 --YTSGKTAKFVKRFGDIGDQLRAAAAAYAAEVREGTFPGPEHS 282
>sp|A3DDV7|PANB_CLOTH 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
thermocellum (strain ATCC 27405 / DSM 1237) GN=panB PE=3
SV=1
Length = 283
Score = 261 bits (666), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 186/292 (63%), Gaps = 11/292 (3%)
Query: 76 NQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPI 135
N + T + K G ITM+TAYDYP+A LD AG+D LVGDS MVV G++ T +
Sbjct: 2 NDKFTTASFLESKKQGRKITMLTAYDYPTAKILDEAGVDSILVGDSLGMVVLGYEDTTRV 61
Query: 136 TLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP 195
T+++M+ H +AV RG KR ++V D+PF +Y + N +V A R++ EGG A+KLEGG
Sbjct: 62 TMDDMVHHTKAVVRGVKRAMVVADMPFLSYHTGKNDSVRNAGRLVSEGGCKAVKLEGGE- 120
Query: 196 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFS 255
I + I+ AGI V+GH+G TPQ+I+V GG + QGK + +A K+ AL LQ+ G F+
Sbjct: 121 DIIENVKAIISAGIPVVGHLGYTPQSINVFGGHKAQGKTIDTAKKIYRDALLLQKAGVFA 180
Query: 256 VVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQ 315
VVLECVP +AA + L IPTIGIG+GP C GQVLV HDL GM + TPK K+
Sbjct: 181 VVLECVPYKLAAFISKRLDIPTIGIGSGPDCDGQVLVIHDLTGMFKD-----FTPKHVKK 235
Query: 316 FARVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFFNELQKLGFD 367
+A +G+ ++ A+ Y +EV NG FP +S +K+ + +EL K+ FD
Sbjct: 236 YAEIGETVSTAVKSYIDEVKNGVFPTEKNS-FKVD----DWIIDELDKVRFD 282
>sp|B8G644|PANB_CHLAD 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Chloroflexus
aggregans (strain MD-66 / DSM 9485) GN=panB PE=3 SV=1
Length = 279
Score = 258 bits (659), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 188/286 (65%), Gaps = 9/286 (3%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T+ ++Q GE I MVTAYDY SA D AGI + LVGDS MVV GHD+T+P+TL
Sbjct: 2 RTTIRDIQQMRDRGERIPMVTAYDYTSAQIADRAGIPMILVGDSLGMVVLGHDSTVPVTL 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
+EM+ H RAV RGA+ L++GDLPF TY +S QAV +A R+L+E G A+KLEGG
Sbjct: 62 DEMIHHTRAVVRGARNALIIGDLPFLTY-ASPEQAVISAGRMLQEAGAQAVKLEGGVHIA 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
T AR +V GI VMGH+G TPQA++ + G R QG+ A +++E ALA+QE G F++V
Sbjct: 121 PTIAR-LVHLGIPVMGHIGFTPQAVNQI-GLRVQGRRANEARQLLEDALAVQEAGAFAIV 178
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LE VP +A A T L+IPTIGIGAG CSGQV V+HDLLG+ ++ P+ +++
Sbjct: 179 LELVPAELAQAITERLRIPTIGIGAGAGCSGQVQVWHDLLGL-----YSDFVPRHARRYT 233
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFFNELQK 363
+ VI +AL +Y +V G+FPGP HS +M ++ L++
Sbjct: 234 DLATVIGEALTQYVHDVRTGTFPGPEHSS-RMDPTELAAALGNLEE 278
>sp|Q311U7|PANB_DESDG 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Desulfovibrio
desulfuricans (strain G20) GN=panB PE=3 SV=1
Length = 289
Score = 258 bits (658), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/257 (51%), Positives = 173/257 (67%), Gaps = 6/257 (2%)
Query: 89 KNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEEMLVHCRAVA 148
KN + M+TAYDYP+A D G+D+ LVGDS AMVV GH+ TL +TL+EM+ HCRAV
Sbjct: 19 KNTRRLAMLTAYDYPTASIADEGGMDMLLVGDSLAMVVLGHEDTLSVTLDEMIHHCRAVT 78
Query: 149 RGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRITAARGIVEAG 208
RGA R L+VGDLPF TYE +QA+ +A R+ +EGG+ A+KLEGG +V+AG
Sbjct: 79 RGASRALVVGDLPFMTYEQGPDQAMHSAARLFREGGVRAVKLEGGKEV-APQVEALVKAG 137
Query: 209 IAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECVPPPVAAA 268
I VMGH+GLTPQ ++ LGGF+ QG++ +A + E A L++ GCF++VLE +P PVAA
Sbjct: 138 IPVMGHIGLTPQRVAALGGFKVQGRSAAAARSLAEDARILEDAGCFALVLEAIPAPVAAH 197
Query: 269 ATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKALL 328
T IPTIGIGAG C GQVLV HD+LG+ + TPKF K++A + KA+
Sbjct: 198 ITRTSGIPTIGIGAGAQCDGQVLVVHDMLGLFD-----RFTPKFVKRYAELRGHAVKAVQ 252
Query: 329 EYKEEVTNGSFPGPSHS 345
+Y +EV G FP HS
Sbjct: 253 QYGDEVRQGEFPAAQHS 269
>sp|B9LII0|PANB_CHLSY 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Chloroflexus
aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)
GN=panB PE=3 SV=1
Length = 281
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 185/268 (69%), Gaps = 8/268 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R+T+ ++Q GE I MVTAYDY SA D AGI + LVGDS MVV G+++T+P+TL
Sbjct: 2 RITIRDIQQMRDRGERIPMVTAYDYTSAQIADRAGIPLILVGDSLGMVVLGYNSTVPVTL 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
++M+ H RAV RG ++ L++GDLPF TY +S QA+ +A R+L+E G A+KLEGG
Sbjct: 62 DDMIHHTRAVVRGTQKALVIGDLPFLTY-TSPEQAMQSAGRMLQEAGAQAVKLEGGVHIA 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
T AR +V+AGI VMGH+G TPQA++ + G R QG+ A +++ ALA+QE G F++V
Sbjct: 121 PTIAR-LVQAGIPVMGHIGFTPQAVNQI-GLRVQGRRAAEAQRLLADALAVQEAGAFAIV 178
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LE VP +A A T L+IPTIGIGAG CSGQV V+HD+LG+ ++ P+ K++A
Sbjct: 179 LELVPAELAQAITERLRIPTIGIGAGAGCSGQVQVWHDMLGL-----YSDFLPRHAKRYA 233
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ +I +AL +Y +V NG+FPGP HS
Sbjct: 234 DLATIIAEALSQYASDVRNGTFPGPEHS 261
>sp|A9WFR7|PANB_CHLAA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=panB PE=3 SV=1
Length = 281
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 185/268 (69%), Gaps = 8/268 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R+T+ ++Q GE I MVTAYDY SA D AGI + LVGDS MVV G+++T+P+TL
Sbjct: 2 RITIRDIQQMRDRGERIPMVTAYDYTSAQIADRAGIPLILVGDSLGMVVLGYNSTVPVTL 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
++M+ H RAV RG ++ L++GDLPF TY +S QA+ +A R+L+E G A+KLEGG
Sbjct: 62 DDMIHHTRAVVRGTQKALVIGDLPFLTY-TSPEQAMQSAGRMLQEAGAQAVKLEGGVHIA 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
T AR +V+AGI VMGH+G TPQA++ + G R QG+ A +++ ALA+QE G F++V
Sbjct: 121 PTIAR-LVQAGIPVMGHIGFTPQAVNQI-GLRVQGRRAAEAQRLLADALAVQEAGAFAIV 178
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LE VP +A A T L+IPTIGIGAG CSGQV V+HD+LG+ ++ P+ K++A
Sbjct: 179 LELVPAELAQAITERLRIPTIGIGAGAGCSGQVQVWHDMLGL-----YSDFLPRHAKRYA 233
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ +I +AL +Y +V NG+FPGP HS
Sbjct: 234 DLATIIAEALSQYASDVRNGTFPGPEHS 261
>sp|A6LWN6|PANB_CLOB8 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=panB
PE=3 SV=1
Length = 275
Score = 254 bits (649), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 188/285 (65%), Gaps = 14/285 (4%)
Query: 80 TLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEE 139
T+ +Q + ++M+TAYDY A +D +G++ L+GDS MV+ G D TL +T++E
Sbjct: 4 TVLTFKQAKEEKRRLSMLTAYDYSMAKIIDESGVNGILIGDSLGMVIKGEDDTLAVTMDE 63
Query: 140 MLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRIT 199
++ H +AV +GAK L+V D+PF +Y S QAV A R++KEGG +A+KLEGG+ +
Sbjct: 64 IIYHTKAVKKGAKNALIVSDMPFLSYHVSIEQAVLNAGRLIKEGGANAVKLEGGA-NVAA 122
Query: 200 AARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLE 259
+ IV+A I VMGH+GLTPQ+++ GGF+ QGK+ ++A ++++ A+ +++ G FS+VLE
Sbjct: 123 QIKAIVDAQIPVMGHIGLTPQSVNAFGGFKVQGKSESAAKQLIDDAVLIEKAGAFSIVLE 182
Query: 260 CVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARV 319
+P VA T+A+ IPTIGIGAG +C GQ+LVY D+LGM PKF KQ+A V
Sbjct: 183 GIPEKVAELITNAVSIPTIGIGAGKYCDGQILVYQDMLGMFND-----FVPKFVKQYANV 237
Query: 320 GDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFFNELQKL 364
G+V+ +A+ Y +EV G FP H+ +K+ NEL+KL
Sbjct: 238 GNVMREAISSYVKEVQAGDFPEEKHT-FKIDE-------NELKKL 274
>sp|Q47R98|PANB_THEFY 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Thermobifida
fusca (strain YX) GN=panB PE=3 SV=1
Length = 280
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 184/287 (64%), Gaps = 11/287 (3%)
Query: 59 SNIPENSVYGGPKPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLV 118
S+ P ++YGG + N+RVT+ L + GE M+TAYD +A D AGI + LV
Sbjct: 3 SHTPAPALYGG----SANRRVTVQDLAAAKERGERWPMLTAYDALTARIFDEAGIPVLLV 58
Query: 119 GDSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVR 178
GDSAAMVV G+D+T+P+TL++M+ AV+R KR L+V DLPFG+Y++ QA+++A R
Sbjct: 59 GDSAAMVVFGYDSTIPVTLDDMIPLTAAVSRATKRALVVADLPFGSYQAGPEQALESAAR 118
Query: 179 ILKEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSA 238
++KEGG A+KLEGG I +V AGI VMGH+GLTPQ+++VLGG+R QG++ +A
Sbjct: 119 LMKEGGAQAVKLEGGH-RVIAQVEALVSAGIPVMGHIGLTPQSVNVLGGYRVQGRSEEAA 177
Query: 239 VKVVETALALQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLG 298
++ A L+ G FSVVLECVP V A T L +PTIGIGAGP QVLV+ D+ G
Sbjct: 178 EALLSDAKELERAGVFSVVLECVPARVGAEITRQLTVPTIGIGAGPDTDAQVLVWQDMAG 237
Query: 299 MMQHPHHAKVTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ P A KF K +A + + + A + EEV G+FP HS
Sbjct: 238 L--SPRVA----KFVKSYANLAEQLRDAATSFAEEVVAGTFPDEQHS 278
>sp|A5N5W0|PANB_CLOK5 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
GN=panB PE=3 SV=1
Length = 280
Score = 252 bits (643), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/271 (48%), Positives = 175/271 (64%), Gaps = 8/271 (2%)
Query: 82 THLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEEML 141
T + KH N E ITM+TAYDY A +D +GI+ LVGDS MV G+ TL +T+E+ML
Sbjct: 8 TFVSAKHNN-EKITMLTAYDYSMAKLMDESGINGILVGDSLGMVCLGYKDTLSVTMEDML 66
Query: 142 VHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRITAA 201
H +AV RGAK L+VGD+PF +Y++S AV A RI++EG A+KLEGG S
Sbjct: 67 HHIKAVTRGAKDALVVGDMPFMSYQTSVYDAVKNAGRIIQEGLAGAVKLEGG-VSVYEQV 125
Query: 202 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECV 261
+ IV+A I VMGH+GLTPQ+++V GGF+ QGK+ + A ++E A L+E G FS+VLE +
Sbjct: 126 KAIVKAQIPVMGHIGLTPQSVNVFGGFKVQGKDESKAKNIIEDAKRLEEAGAFSIVLEGI 185
Query: 262 PPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGD 321
P +A T + IPTIGIGAG +C GQ+LVY D+LG+ + PKF K + G+
Sbjct: 186 PYKLAKIITETVSIPTIGIGAGKYCDGQILVYQDMLGLF-----SDFKPKFVKSYGNAGE 240
Query: 322 VINKALLEYKEEVTNGSFPGPSHSPYKMSSS 352
VI KA +Y EV G FP +S +KM S
Sbjct: 241 VIRKAFKDYITEVKEGIFPDEEYS-FKMDDS 270
>sp|B8J7G7|PANB_ANAD2 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC
BAA-258) GN=panB PE=3 SV=1
Length = 306
Score = 251 bits (640), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 184/283 (65%), Gaps = 10/283 (3%)
Query: 72 PQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDT 131
P P + VT+ LR+ ++GE I MVTAYD +A + AG+D LVGDS M V GH++
Sbjct: 5 PPAPRKHVTIHELRRMKESGERIAMVTAYDATAARLVAVAGVDAVLVGDSLGMAVQGHES 64
Query: 132 TLPITLEEMLVHC----RAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDA 187
TLP+TL++M+ H R +ARG R LV D+ FG+Y++S ++AV A+R++ EGG +A
Sbjct: 65 TLPVTLDQMVYHSAMVRRGLARGDGRAHLVTDMSFGSYQASADEAVKAAMRLVAEGGAEA 124
Query: 188 IKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALA 247
+KLEGG+ R IV AG+ VMGH+GLTPQ++ +GG+ QGK+ A +++ A A
Sbjct: 125 VKLEGGAEFG-EVIRRIVRAGVPVMGHIGLTPQSVHKMGGYVVQGKDSEKAQQILRDARA 183
Query: 248 LQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAK 307
L+ GC+++VLEC+P +A TS L+IPTIGIGAGP C GQVLV +DLLG+ A
Sbjct: 184 LEAAGCYALVLECIPSELARIVTSQLRIPTIGIGAGPHCDGQVLVLNDLLGL-----DAS 238
Query: 308 VTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHSPYKMS 350
TP+F K+F VG + A+ Y EV +FP +HS + S
Sbjct: 239 FTPRFVKRFGEVGAAVQDAVGAYVGEVKARAFPDDAHSFHSSS 281
>sp|A7HGZ2|PANB_ANADF 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Anaeromyxobacter sp. (strain Fw109-5) GN=panB PE=3
SV=1
Length = 305
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/275 (48%), Positives = 184/275 (66%), Gaps = 10/275 (3%)
Query: 75 PNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLP 134
P +RVT+ LR+ GE I +VTAYD +A D+AG+D+ LVGDS MVV GH++TLP
Sbjct: 7 PRRRVTIHELRRMKDAGEKIAVVTAYDATAARLADAAGVDVVLVGDSLGMVVQGHESTLP 66
Query: 135 ITLEEMLVHCRAVARG----AKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKL 190
+TLE M+ H AV RG + R LVGD+PFG+Y++S ++AV +A+R++ EGG++++KL
Sbjct: 67 VTLEHMIYHSAAVRRGLARSSGRAHLVGDMPFGSYQASADEAVKSAMRLVAEGGVESVKL 126
Query: 191 EGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQE 250
EGG+ + R I AG+ VMGH+GLTPQA+ +GG+ QGK+ A +++ A AL+
Sbjct: 127 EGGA-EFVEVIRRIARAGVPVMGHIGLTPQAVHRMGGYVVQGKDSEKAQQLLRDARALEL 185
Query: 251 VGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTP 310
GC+++VLEC+P +A +S L+IPTIGIGAG C GQVLV +DLLGM TP
Sbjct: 186 AGCYAIVLECIPAELARIISSQLRIPTIGIGAGLHCDGQVLVLNDLLGM-----DDAFTP 240
Query: 311 KFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
KF K+F +G I+ A+ Y EV FP +HS
Sbjct: 241 KFVKRFGEIGQAISTAVGAYVGEVKRRVFPDDAHS 275
>sp|B4UDZ3|PANB_ANASK 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Anaeromyxobacter sp. (strain K) GN=panB PE=3 SV=1
Length = 306
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 184/283 (65%), Gaps = 10/283 (3%)
Query: 72 PQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDT 131
P P + VT+ LR+ ++GE I MVTAYD +A + AG+D LVGDS M V GH++
Sbjct: 5 PPAPRKHVTIHELRRMKESGERIAMVTAYDATAARLVAVAGVDAVLVGDSLGMAVQGHES 64
Query: 132 TLPITLEEMLVHC----RAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDA 187
TLP+TL++M+ H R +ARG R LV D+ FG+Y++S ++AV A+R++ EGG +A
Sbjct: 65 TLPVTLDQMVYHSAMVRRGLARGDGRAHLVTDMSFGSYQASADEAVKAAMRLVAEGGAEA 124
Query: 188 IKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALA 247
+KLEGG+ R IV AG+ VMGH+GLTPQ++ +GG+ QGK+ A +++ A A
Sbjct: 125 VKLEGGAEFG-EVIRRIVRAGVPVMGHIGLTPQSVHKMGGYVVQGKDSEKAQQILRDARA 183
Query: 248 LQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAK 307
L+ GC+++VLEC+P +A TS L++PTIGIGAGP C GQVLV +DLLG+ A
Sbjct: 184 LEAAGCYALVLECIPSELARIVTSQLRVPTIGIGAGPHCDGQVLVLNDLLGL-----DAS 238
Query: 308 VTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHSPYKMS 350
TP+F K+F VG + A+ Y EV +FP +HS + S
Sbjct: 239 FTPRFVKRFGEVGAAVQDAVGAYVGEVKARAFPDDAHSFHSSS 281
>sp|Q833S5|PANB_ENTFA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=panB PE=3 SV=1
Length = 275
Score = 250 bits (638), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 180/275 (65%), Gaps = 11/275 (4%)
Query: 80 TLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEE 139
T ++ E +TM+TAYDY +A +D AGI+ LVGDS MV GH+ TL +T+E+
Sbjct: 4 TAVTFKESKLRNEKLTMLTAYDYSTAKIIDEAGINGILVGDSLGMVCLGHEDTLSVTMED 63
Query: 140 MLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP--SR 197
M+ H RAV RGAK L+V D+PF +Y++S +V A R++KEG +KLEGG +
Sbjct: 64 MIHHTRAVTRGAKNTLVVADMPFMSYQTSVYDSVVNAGRLIKEGRAQVVKLEGGIEVCDK 123
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
I A IV+A I VM H+GLTPQ+++ GGF+ QGK+ +A +++ A A+++ G F+VV
Sbjct: 124 IEA---IVKASIPVMAHIGLTPQSVNAFGGFKVQGKDKEAAKELIRAAKAVEKAGAFAVV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LECVP +A + + IPTIGIGAG C GQ+LVY D+LGM ++ TPKF K++A
Sbjct: 181 LECVPTKLAELISKEISIPTIGIGAGAGCDGQILVYQDMLGM-----YSDFTPKFVKKYA 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSS 352
+ + +NKA +Y EEV +G FPGP H +K+S
Sbjct: 236 NLSEEMNKAFTKYIEEVKDGVFPGPEHG-FKISDD 269
>sp|B2V1L8|PANB_CLOBA 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Alaska E43 / Type E3) GN=panB PE=3
SV=1
Length = 275
Score = 249 bits (635), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 184/285 (64%), Gaps = 14/285 (4%)
Query: 80 TLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLEE 139
T+ ++ G+ I+M+TAYDY A +D +GI+ L+GDS MV+ G + TL +T++E
Sbjct: 4 TIATFQEFKNKGKKISMLTAYDYSMAKIIDESGINGILIGDSLGMVIKGEEDTLSVTVDE 63
Query: 140 MLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRIT 199
++ H ++V +GAK L+V D+PF +Y +S +AV A +++KEGG +A+KLEGG+ S I
Sbjct: 64 IIYHTKSVKKGAKNALIVSDMPFLSYHTSVEEAVKNAGKMIKEGGANAVKLEGGA-SVIK 122
Query: 200 AARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLE 259
+ IV+A I VMGH+GLTPQ+++ GGF+ QGK+ +A +++E A +++ G F++VLE
Sbjct: 123 QIKAIVDAQIPVMGHLGLTPQSVNAFGGFKIQGKSEEAAKRLIEDAKLIEDAGAFAIVLE 182
Query: 260 CVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARV 319
CVP VA T + IPTIGIGAG C GQ+LVY D+LGM PKF KQ+A +
Sbjct: 183 CVPKKVAEIITKEISIPTIGIGAGNECDGQILVYQDMLGMFDD-----FIPKFVKQYANL 237
Query: 320 GDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFFNELQKL 364
G + +A+ Y EV GSFP HS +K+ ELQKL
Sbjct: 238 GAQMREAIQIYIGEVGEGSFPQDKHS-FKIDE-------KELQKL 274
>sp|Q3A3I6|PANB_PELCD 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=panB PE=3
SV=1
Length = 267
Score = 248 bits (634), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/270 (47%), Positives = 176/270 (65%), Gaps = 6/270 (2%)
Query: 76 NQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPI 135
+R T+ +++ GE I M+TAYDYP A +D GID+ LVGDS VV G+D TLP+
Sbjct: 2 QKRKTVLDIQRMKAEGEKIAMLTAYDYPFARLMDLEGIDMVLVGDSVGPVVAGYDHTLPV 61
Query: 136 TLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP 195
T++EM+ HCRAVARG + LV D+PF +Y+ +A A R++KEG A+KLEGG P
Sbjct: 62 TMDEMIYHCRAVARGLGQAFLVADMPFLSYQVDLREARLNAGRLVKEGCAQAVKLEGGEP 121
Query: 196 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFS 255
R +V+ I V+GH+GLTPQ+I +GG++ QGK+ A +++ A A+QE G F+
Sbjct: 122 V-AEVIRTLVDMDIPVVGHIGLTPQSIHRMGGYKVQGKHDQQARQLMRDARAVQEAGAFA 180
Query: 256 VVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQ 315
VVLE +P +A T AL IPTIGIGAG C GQVLV HD+LG+ + K +P+F K+
Sbjct: 181 VVLEGIPAGLAGQITEALDIPTIGIGAGVDCDGQVLVIHDILGLCE-----KYSPRFVKR 235
Query: 316 FARVGDVINKALLEYKEEVTNGSFPGPSHS 345
+A V +I + + EY +V G FPGP HS
Sbjct: 236 YADVASIIRQGVKEYIGDVKQGVFPGPEHS 265
>sp|Q0B0P6|PANB_SYNWW 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Syntrophomonas
wolfei subsp. wolfei (strain Goettingen) GN=panB PE=3
SV=1
Length = 276
Score = 248 bits (633), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/267 (47%), Positives = 179/267 (67%), Gaps = 6/267 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
RVT++ L+ K K E I+M+TAYDY A +D AGID+ LVGDS VV G+D TL +T+
Sbjct: 3 RVTVSVLKDKKKRKEKISMLTAYDYSLAGMVDEAGIDMILVGDSLGNVVLGYDNTLAVTM 62
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
++M+ H + V R +K ++VGD+PF +Y S +AV A R ++E G A+KLEGGS R
Sbjct: 63 DDMIHHSKTVVRASKNAMVVGDMPFLSYHISKKEAVRNAGRFIQEAGCSAVKLEGGS-ER 121
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ + I++A I VMGH+GLTPQ++ GGF+ QGK++ +A K+VE A AL + G + +V
Sbjct: 122 VDTVKAILDAQIPVMGHIGLTPQSVHQFGGFKVQGKDLETAKKLVEDARALDQAGVYCIV 181
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LECVP +A T + +PTIGIGAGP+C GQVLV +D+LGM + TPKF ++FA
Sbjct: 182 LECVPSELARRVTEEISVPTIGIGAGPYCDGQVLVINDMLGMFR-----GFTPKFVRKFA 236
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSH 344
+ +I +AL YK EV G+FP H
Sbjct: 237 NLEPLIMEALKNYKAEVEAGTFPAEEH 263
>sp|C0QFH9|PANB_DESAH 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Desulfobacterium autotrophicum (strain ATCC 43914 /
DSM 3382 / HRM2) GN=panB PE=3 SV=1
Length = 263
Score = 247 bits (630), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/271 (48%), Positives = 172/271 (63%), Gaps = 11/271 (4%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
RVT T L + + G+ IT +TAYD+P A +D+AGIDI LVGDS MVV G TTLP+T+
Sbjct: 4 RVTTTTLFKMKQEGKRITALTAYDHPFATLVDAAGIDIILVGDSLGMVVQGKQTTLPVTM 63
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
+E+L H V R R ++VGD+PF +Y+SS NQAVD A R LKE A+KLEGG+
Sbjct: 64 DEILYHTAMVTRACNRAMVVGDMPFMSYQSSINQAVDNAGRFLKEADASAVKLEGGA-DV 122
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ I +AGI V H+GLTPQ++ +GGFR Q ++V AL +Q+ G FSVV
Sbjct: 123 CPVIQAIAKAGIPVQAHIGLTPQSVHQMGGFRVQ----RDEERLVSDALKVQDAGAFSVV 178
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LE +P +A T L IPTIGIGAGP C GQ+LV HD+LG+ H + PKF +QFA
Sbjct: 179 LEGIPSDIAGIITKKLDIPTIGIGAGPGCDGQILVLHDMLGL-----HDRHLPKFVRQFA 233
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYK 348
+ + L +Y++ V NGSFP H YK
Sbjct: 234 DLRTQAARGLEQYRDAVRNGSFPAEEHG-YK 263
>sp|A5FR68|PANB_DEHSB 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Dehalococcoides
sp. (strain BAV1) GN=panB PE=3 SV=1
Length = 279
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 177/268 (66%), Gaps = 6/268 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ L++ +N + I ++TAYDYP+A LD AGI LVGDS MVV G+D+T+ +T+
Sbjct: 2 RTTISQLKEMKQNKQKIAILTAYDYPTAQILDKAGIPAILVGDSLGMVVLGYDSTVSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG+++ L++ D+PF TY S QA+ A R ++EGG A+KLEGG
Sbjct: 62 EDMLHHLKAVVRGSQKALIIADMPFMTYHLSPEQALLNAGRFIQEGGAQAVKLEGGVNVA 121
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
R IV+ GI VMGH+GLTPQ+++ L GF+ QGK + +A+ ++E A AL++ G F++V
Sbjct: 122 DKVKR-IVDCGIPVMGHIGLTPQSVNQLSGFKVQGKTLATALSLIEDAKALEKAGAFAIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LE +P +AA T+ + IPTIGIGAG C GQV V D+LGM PK K++A
Sbjct: 181 LETMPAELAAIITAGISIPTIGIGAGEECDGQVQVISDMLGMF-----TDFIPKHTKRYA 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ +I KA+ EY EVT G+FP S
Sbjct: 236 DLNGIITKAVSEYAAEVTKGAFPTLKES 263
>sp|B8HWP9|PANB_CYAP4 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Cyanothece sp.
(strain PCC 7425 / ATCC 29141) GN=panB PE=3 SV=1
Length = 261
Score = 246 bits (627), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 172/263 (65%), Gaps = 6/263 (2%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
VT+ L+Q ++G I ++TA+D+ A LD AG+D+ LVGDS AMV GH TLP++L+
Sbjct: 3 VTIPQLQQWKRSGRAIAVLTAWDWLWASLLDQAGVDLILVGDSLAMVALGHKNTLPLSLD 62
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
EML H RAV RG +R L+V DLPFG+Y+ S QAV +A R+LKE A+KLEGG P+ +
Sbjct: 63 EMLHHTRAVCRGVQRALVVCDLPFGSYQESPQQAVRSASRVLKETPAQAVKLEGGYPAMV 122
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVL 258
+V AGI V+GHVGLTPQ++ GG+ QGK+V +A +++ A+AL++ G F+++L
Sbjct: 123 ETVTHLVRAGIPVLGHVGLTPQSVHQYGGYPQQGKSVEAAERILSEAIALEQAGAFAIIL 182
Query: 259 ECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFAR 318
E +P + T L IPTIGIGAGP C GQVLV D LG+ + P F K +A
Sbjct: 183 EHIPADLGLTITQKLSIPTIGIGAGPHCDGQVLVTADALGLSER------QPPFAKAYAN 236
Query: 319 VGDVINKALLEYKEEVTNGSFPG 341
+ + I +A+ EY EV FPG
Sbjct: 237 LRETILQAVQEYCNEVQTHQFPG 259
>sp|Q7NMK3|PANB_GLOVI 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Gloeobacter
violaceus (strain PCC 7421) GN=panB PE=3 SV=2
Length = 260
Score = 245 bits (626), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 172/256 (67%), Gaps = 6/256 (2%)
Query: 79 VTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITLE 138
+++ LR+ + +PI +TA +Y A LD AG+D+ LVGDS +MV GH +TLP+T++
Sbjct: 3 LSIHSLRKLKERAQPIVALTATEYAMARILDQAGVDLLLVGDSLSMVALGHTSTLPVTVD 62
Query: 139 EMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSRI 198
E+L HCRAV RG +R LLV DLPFG+YE S QA TA R LKE G+ A+KLEGG P
Sbjct: 63 ELLHHCRAVRRGVERALLVADLPFGSYEQSPQQAFSTATRFLKEAGVQAVKLEGGYPRMT 122
Query: 199 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVL 258
+ E+GI V+GH+GLTPQA+ LGG+R QGK +A ++++ ALAL+ G F++VL
Sbjct: 123 ETVAFLTESGIPVLGHLGLTPQAVHQLGGYRVQGKTAQAAERLIDQALALEGAGAFALVL 182
Query: 259 ECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFAR 318
E +P +A + L IPT+GIGAGP C+GQ+LV HDLLG+ ++P P F +A
Sbjct: 183 EHIPYDLAGEISGKLVIPTVGIGAGPHCNGQILVTHDLLGLTENP------PPFVNPYAD 236
Query: 319 VGDVINKALLEYKEEV 334
+ +I+KA+ Y +V
Sbjct: 237 LRALISKAVGRYSADV 252
>sp|A7GAI6|PANB_CLOBL 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Langeland / NCTC 10281 / Type F)
GN=panB PE=3 SV=1
Length = 275
Score = 245 bits (626), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 178/281 (63%), Gaps = 7/281 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K++E A L+E G FS+V
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKLIEDAKILEEAGAFSIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LEC+P ++ + ++ IPTIGIGAG +C GQ+LVY D+L M + PKF K F
Sbjct: 181 LECIPEKLSKIISESISIPTIGIGAGKYCDGQILVYQDMLSMF-----SDFKPKFVKSFG 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFF 358
+G+ I + +Y +EV FP H+ +K+ N +
Sbjct: 236 NIGESIKDGVSQYIKEVKEAKFPEEKHA-FKIDDDVINKLY 275
>sp|B1IEL6|PANB_CLOBK 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Okra / Type B1) GN=panB PE=3 SV=1
Length = 275
Score = 245 bits (626), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 178/281 (63%), Gaps = 7/281 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K++E A L+E G FS+V
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKLIEDAKILEEAGAFSIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LEC+P ++ + ++ IPTIGIGAG +C GQ+LVY D+L M + PKF K F
Sbjct: 181 LECIPEKLSKIISESISIPTIGIGAGKYCDGQILVYQDMLSMF-----SDFKPKFVKSFG 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFF 358
+G+ I + +Y +EV FP H+ +K+ N +
Sbjct: 236 NIGESIKDGVSQYIKEVKEAKFPEEKHA-FKIDDDVINKLY 275
>sp|C1FS97|PANB_CLOBJ 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Kyoto / Type A2) GN=panB PE=3 SV=1
Length = 275
Score = 245 bits (626), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 178/281 (63%), Gaps = 7/281 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K++E A L+E G FS+V
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKLIEDAKILEEAGAFSIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LEC+P ++ + ++ IPTIGIGAG +C GQ+LVY D+L M + PKF K F
Sbjct: 181 LECIPEKLSKIISESISIPTIGIGAGKYCDGQILVYQDMLSMF-----SDFKPKFVKSFG 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFF 358
+G+ I + +Y +EV FP H+ +K+ N +
Sbjct: 236 NIGESIKDGVSQYIKEVKEAKFPEEKHA-FKIDDDVINKLY 275
>sp|Q9L7B2|PANB_MYCVP 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=panB PE=3 SV=1
Length = 280
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 176/288 (61%), Gaps = 12/288 (4%)
Query: 61 IPENSVYGGP-KPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVG 119
+ E VYG + P +V HL + G M+TAYDY +A D A I + LVG
Sbjct: 1 MSEQPVYGAAAEAPKPRVKVRTHHLHKWKAEGHKWAMLTAYDYSTAAVFDEAEIPVLLVG 60
Query: 120 DSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRI 179
DSAA VV+G+DTT+P+TL+E++ R V RGA L+V DLPFG+YE+ QA+ TA R+
Sbjct: 61 DSAANVVYGYDTTVPVTLDELIPLVRGVVRGAPHALVVADLPFGSYEAGPQQALATATRM 120
Query: 180 LKEGGMDAIKLEGGS--PSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTS 237
LKE G A+KLEGG +I A + AGI VM H+G TPQ+++ LGGFR QG+ +
Sbjct: 121 LKETGAHAVKLEGGERVADQIAA---VSAAGIPVMAHIGFTPQSVNGLGGFRVQGRG-DA 176
Query: 238 AVKVVETALALQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLL 297
A + + A+A+QE G F+VV+E VP +A T L IPT+GIGAGP C QVLV+ D+
Sbjct: 177 AEQTIHDAIAVQEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPSCDAQVLVWQDMA 236
Query: 298 GMMQHPHHAKVTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
GM T KF K+F VGD + +A +Y EV G+FP HS
Sbjct: 237 GMTNGK-----TAKFVKRFGAVGDELRRAASDYAREVATGAFPADEHS 279
>sp|Q3ZXG0|PANB_DEHSC 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Dehalococcoides
sp. (strain CBDB1) GN=panB PE=3 SV=1
Length = 279
Score = 244 bits (623), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 176/268 (65%), Gaps = 6/268 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ L++ +N + I ++TAYDYP+A LD AGI LVGDS MVV G+D+T+ +T+
Sbjct: 2 RTTISQLKEMKQNKQKIAILTAYDYPTAQILDKAGIPAILVGDSLGMVVLGYDSTVSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG+++ L++ D+PF TY S QA+ A R ++EGG A+KLEGG
Sbjct: 62 EDMLHHLKAVVRGSQKALIIADMPFMTYHLSPEQALLNAGRFIQEGGAQAVKLEGGVNVA 121
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
R IV+ GI VMGH+GLTPQ+++ L GF+ QGK + +A+ ++E A AL++ G F++V
Sbjct: 122 DKVKR-IVDCGIPVMGHIGLTPQSVNQLSGFKVQGKTLATALSLIEDAKALEKAGAFAIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LE +P +AA T+ + IPTIGIGAG C GQV V D+LGM PK K++A
Sbjct: 181 LETMPAELAAIITAGISIPTIGIGAGEECDGQVQVISDMLGMF-----TDFVPKHTKRYA 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ I KA+ EY EVT G+FP S
Sbjct: 236 DLNGSITKAVSEYAAEVTKGAFPTLKES 263
>sp|Q3Z8B4|PANB_DEHE1 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Dehalococcoides
ethenogenes (strain 195) GN=panB PE=3 SV=2
Length = 282
Score = 244 bits (623), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 176/263 (66%), Gaps = 6/263 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ L++ +N + I M+TAYDYP+A LD AGI LVGDS MVV G+D+T+ +T+
Sbjct: 2 RTTISQLKEMKQNKQKIAMLTAYDYPTAQILDKAGIPAILVGDSLGMVVLGYDSTVSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG+++ +++ D+PF TY S QA+ A R ++EGG A+KLEGG
Sbjct: 62 EDMLHHLKAVVRGSQKAMVIADMPFMTYHLSPEQALLNAGRFMQEGGAQAVKLEGGVNVA 121
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
R IV+ GI VMGH+GLTPQ+++ L GF+ QGK +T+A+ ++E A AL++ G F++V
Sbjct: 122 DKVKR-IVDCGIPVMGHIGLTPQSVNQLSGFKVQGKTLTAALALLEDARALEKAGAFAIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LE +P +AA T+A+ IPTIGIGAG C GQV V D+LGM PK K++A
Sbjct: 181 LETMPAELAAMITAAVSIPTIGIGAGENCDGQVQVVSDMLGMF-----TDFVPKHTKKYA 235
Query: 318 RVGDVINKALLEYKEEVTNGSFP 340
+ +I+KA+ Y EV G FP
Sbjct: 236 DLNGIISKAVSGYVTEVAKGEFP 258
>sp|Q0SHJ0|PANB_RHOSR 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Rhodococcus sp.
(strain RHA1) GN=panB PE=3 SV=1
Length = 289
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/286 (47%), Positives = 177/286 (61%), Gaps = 12/286 (4%)
Query: 63 ENSVYG-GPKPQNPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDS 121
E+ +YG P P ++ HL+ GE M+TAYDY SA + AGI + LVGDS
Sbjct: 12 EDRLYGSAPSHDVPKRKTRTHHLQAMKAEGERWAMLTAYDYSSARIFEEAGIPVLLVGDS 71
Query: 122 AAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILK 181
AA VV+G++TT+P+T++E+L R V RGA L+V DLPFG+YESS QA+ +A R +K
Sbjct: 72 AANVVYGYETTVPVTIDELLPLVRGVVRGAPHALVVADLPFGSYESSPEQALASATRFMK 131
Query: 182 EGGMDAIKLEGGS--PSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAV 239
EG A+KLEGG +I A I AGI VM HVG TPQ+++ LGGFR QG+ +A
Sbjct: 132 EGLAHAVKLEGGERVAPQIAA---ITAAGIPVMAHVGFTPQSVNSLGGFRVQGRG-DAAE 187
Query: 240 KVVETALALQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGM 299
++V A+A+QE G FSVV+E VP +A T L IPT+GIGAG C QVLV+ D+ G
Sbjct: 188 QLVADAIAVQEAGAFSVVMEMVPAEIAGQVTRKLTIPTVGIGAGVECDAQVLVWQDMAG- 246
Query: 300 MQHPHHAKVTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ + T KF K+F VGD + A Y EV G+FP HS
Sbjct: 247 ----YTSGKTAKFVKRFGNVGDELRSAAAAYATEVRAGTFPAEEHS 288
>sp|Q2IFU2|PANB_ANADE 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=panB
PE=3 SV=1
Length = 305
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 182/280 (65%), Gaps = 10/280 (3%)
Query: 75 PNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLP 134
P + V + LR+ + GE I MVTAYD +A + +AG+D LVGDS M V GH++TLP
Sbjct: 7 PRKHVNIHELRRMKEAGERIAMVTAYDATAARLVAAAGVDAVLVGDSLGMAVQGHESTLP 66
Query: 135 ITLEEMLVHC----RAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKL 190
+TL++M+ H R +ARG R LV D+ FG+Y++S ++AV A+R++ EGG +A+KL
Sbjct: 67 VTLDQMVYHSAMVRRGLARGDGRAHLVADMSFGSYQASADEAVKAAMRLVAEGGAEAVKL 126
Query: 191 EGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQE 250
EGG+ R IV AG+ VMGH+GLTPQ++ +GG+ QGK+ A +++ A AL+
Sbjct: 127 EGGAEFG-DVIRRIVRAGVPVMGHIGLTPQSVHKMGGYVVQGKDSEKAQQILRDARALEA 185
Query: 251 VGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTP 310
GC+++VLEC+P +A TS L+IPTIGIGAGP C GQVLV +DLLG+ A TP
Sbjct: 186 AGCYALVLECIPSELARIVTSQLRIPTIGIGAGPHCDGQVLVLNDLLGL-----DASFTP 240
Query: 311 KFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHSPYKMS 350
KF K+F +G + A+ Y EV +FP +HS + S
Sbjct: 241 KFVKRFGELGAAVEGAVGAYVGEVKARAFPDDAHSFHSAS 280
>sp|C3L035|PANB_CLOB6 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain 657 / Type Ba4) GN=panB PE=3 SV=1
Length = 275
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 178/281 (63%), Gaps = 7/281 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKDRGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+M+ H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMIHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K++E A L+E G FS+V
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKLIEDAKILEEAGAFSIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LEC+P ++ + ++ IPTIGIGAG +C GQ+LVY D+L M + PKF K F
Sbjct: 181 LECIPEKLSKIISESISIPTIGIGAGKYCDGQILVYQDMLSMF-----SDFKPKFVKSFG 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFF 358
+G+ I + +Y +EV FP H+ +K+ N +
Sbjct: 236 NIGESIKDGVSQYIKEVKESKFPEEKHA-FKIDDDVINKLY 275
>sp|A7FR60|PANB_CLOB1 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain ATCC 19397 / Type A) GN=panB PE=3 SV=1
Length = 275
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/281 (44%), Positives = 178/281 (63%), Gaps = 7/281 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K++E A L+E G FS+V
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKLIEDAKILEEAGAFSIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LEC+P ++ + ++ IPTIGIGAG +C GQ+LVY D+L M + PKF K F
Sbjct: 181 LECIPEKLSKIISESISIPTIGIGAGKYCDGQILVYQDMLSMF-----SDFKPKFVKSFG 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFF 358
+G+ I + +Y +EV FP H+ +K+ N +
Sbjct: 236 NIGESIKDGVSQYIKEVKEVKFPEEKHA-FKIDDDVINKLY 275
>sp|B1KUY7|PANB_CLOBM 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
botulinum (strain Loch Maree / Type A3) GN=panB PE=3
SV=1
Length = 275
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 178/281 (63%), Gaps = 7/281 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
R T++ ++ GE ITM+TAYDY A +DS+GI+ LVGDS MV G++ TL +T+
Sbjct: 2 RNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDSLGMVCLGYENTLSVTM 61
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+ML H +AV RG L+VGD+PF +Y++S AV A R +KE G A+KLEGG+ +
Sbjct: 62 EDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFIKEAGAHAVKLEGGA-TV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
+ IV+A I VMGH+GLTPQ++++ GGF+ QGKN A K++E A L+E G F++V
Sbjct: 121 AEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKKLIEDAKILEEAGAFAIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LEC+P ++ + ++ IPTIGIGAG +C GQ+LVY D+L M + PKF K F
Sbjct: 181 LECIPEKLSKIISESISIPTIGIGAGKYCDGQILVYQDMLSMF-----SDFKPKFVKSFG 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFF 358
+G+ I + +Y +EV FP H+ +K+ N +
Sbjct: 236 SIGESIKDGVSQYIKEVKEAKFPEEKHA-FKIDDDVINKLY 275
>sp|Q74CG8|PANB_GEOSL 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=panB PE=3 SV=1
Length = 267
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/270 (46%), Positives = 174/270 (64%), Gaps = 6/270 (2%)
Query: 76 NQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPI 135
N+ T+ +++ GE IT++T+YDYP +D GID+ LVGDS +V GHD TLP+
Sbjct: 2 NRAKTILDIQKMKATGEKITVLTSYDYPFTRIMDECGIDMILVGDSVGVVFAGHDNTLPV 61
Query: 136 TLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP 195
T+++ML H RAV R + L+V D+PF +Y++ A A R++KEGG +A+KLEGG+
Sbjct: 62 TVDDMLYHTRAVTRARPKALVVTDMPFLSYQTDLRDARINAGRLVKEGGAEAVKLEGGAH 121
Query: 196 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFS 255
T R IV+ I VM H+GLTPQ+I +GG++ QGK A +++E ALA+QE G F+
Sbjct: 122 VTDT-IRAIVDMDIPVMAHIGLTPQSIHRMGGYKVQGKKDEQAQRLLEDALAVQEAGAFA 180
Query: 256 VVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQ 315
VVLE +P +A T+ L IPTIGIGAGP C GQVLV HD+LG+ + K +PKF K+
Sbjct: 181 VVLEGIPLKLAGRITAELSIPTIGIGAGPHCDGQVLVIHDILGLCE-----KYSPKFVKR 235
Query: 316 FARVGDVINKALLEYKEEVTNGSFPGPSHS 345
+ +I+ A+ Y EV G FP HS
Sbjct: 236 YGDARTLISDAVASYISEVKKGEFPTEGHS 265
>sp|A4XMZ4|PANB_CALS8 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=panB PE=3 SV=1
Length = 264
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 175/268 (65%), Gaps = 7/268 (2%)
Query: 78 RVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPITL 137
+VT L +K + GE ITM+TAYDY A DS +DI LVGDS MV+ G+D+T+P+T+
Sbjct: 3 KVTTKTLFEKKQKGEKITMLTAYDYTFAKLFDSCMVDILLVGDSLGMVILGYDSTIPVTM 62
Query: 138 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPSR 197
E+M H +AVARG K ++V D+PF +Y ++ +AV A R+++ G A+K+EG
Sbjct: 63 EDMEHHVKAVARGTKYSMVVADMPFLSYHTTPEEAVRNAGRLIRAGAY-AVKIEG-CDDV 120
Query: 198 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVV 257
I +++A I VMGH+GLTPQ+++V GG+ + K A K++E A L+EVG F++V
Sbjct: 121 IDKIEAVIKAQIPVMGHLGLTPQSVNVFGGYDLRAKEEKEAKKLIEDAKKLEEVGVFAIV 180
Query: 258 LECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFA 317
LE VP VA ++++P IGIGAGP+C GQVLV +D+LGM + PKF K++A
Sbjct: 181 LEKVPAMVAKQVQESVKVPIIGIGAGPYCDGQVLVCYDMLGM-----YEDFKPKFVKRYA 235
Query: 318 RVGDVINKALLEYKEEVTNGSFPGPSHS 345
VG +I A+ +Y +EV G FPG HS
Sbjct: 236 EVGSIIKDAVSKYIDEVKRGEFPGKEHS 263
>sp|Q1B6P5|PANB_MYCSS 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Mycobacterium
sp. (strain MCS) GN=panB PE=3 SV=1
Length = 282
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 61 IPENSVYGGPKPQ---NPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICL 117
+ E +VYG Q P +V THL++ G M+TAYD+ +A D AGI + L
Sbjct: 1 MSEQTVYGAASDQPTPKPRVKVRTTHLQKWKAEGHKWAMLTAYDFSTARAFDDAGIPVLL 60
Query: 118 VGDSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAV 177
VGDSAA VV+G+DTT+PIT++E++ R V RGA L+V DLPFG+YE QA+ TA
Sbjct: 61 VGDSAANVVYGYDTTVPITIDELIPLVRGVVRGAPHALVVADLPFGSYEEGPRQALATAT 120
Query: 178 RILKEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTS 237
R LKE G A+KLEGG A + AGI VM H+G TPQ+++ LGGF+ QG+ +
Sbjct: 121 RFLKETGAHAVKLEGGERVAEQIAT-LSAAGIPVMAHIGFTPQSVNGLGGFKVQGRG-DA 178
Query: 238 AVKVVETALALQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLL 297
A + + A+A+QE G FSVV+E VP +A T L IPT+GIGAGP C QVLV+ D+
Sbjct: 179 AEQTIHDAIAVQEAGAFSVVMEMVPAELATQITGKLTIPTVGIGAGPNCDAQVLVWQDMA 238
Query: 298 GMMQHPHHAKVTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
G+ + T KF K+F VG + +A +Y +EV G FP HS
Sbjct: 239 GLT-----SGRTAKFVKRFGDVGAELRRAASQYADEVAAGVFPAEEHS 281
>sp|A1UID0|PANB_MYCSK 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Mycobacterium
sp. (strain KMS) GN=panB PE=3 SV=1
Length = 282
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 61 IPENSVYGGPKPQ---NPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICL 117
+ E +VYG Q P +V THL++ G M+TAYD+ +A D AGI + L
Sbjct: 1 MSEQTVYGAASDQPTPKPRVKVRTTHLQKWKAEGHKWAMLTAYDFSTARAFDDAGIPVLL 60
Query: 118 VGDSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAV 177
VGDSAA VV+G+DTT+PIT++E++ R V RGA L+V DLPFG+YE QA+ TA
Sbjct: 61 VGDSAANVVYGYDTTVPITIDELIPLVRGVVRGAPHALVVADLPFGSYEEGPRQALATAT 120
Query: 178 RILKEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTS 237
R LKE G A+KLEGG A + AGI VM H+G TPQ+++ LGGF+ QG+ +
Sbjct: 121 RFLKETGAHAVKLEGGERVAEQIAT-LSAAGIPVMAHIGFTPQSVNGLGGFKVQGRG-DA 178
Query: 238 AVKVVETALALQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLL 297
A + + A+A+QE G FSVV+E VP +A T L IPT+GIGAGP C QVLV+ D+
Sbjct: 179 AEQTIHDAIAVQEAGAFSVVMEMVPAELATQITGKLTIPTVGIGAGPNCDAQVLVWQDMA 238
Query: 298 GMMQHPHHAKVTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
G+ + T KF K+F VG + +A +Y +EV G FP HS
Sbjct: 239 GLT-----SGRTAKFVKRFGDVGAELRRAASQYADEVAAGVFPAEEHS 281
>sp|A3Q1U4|PANB_MYCSJ 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Mycobacterium
sp. (strain JLS) GN=panB PE=3 SV=1
Length = 282
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 176/288 (61%), Gaps = 10/288 (3%)
Query: 61 IPENSVYGGPKPQ---NPNQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICL 117
+ E +VYG Q P +V THL++ G M+TAYD+ +A D AGI + L
Sbjct: 1 MSEQTVYGAASDQPTPKPRVKVRTTHLQKWKAEGHKWAMLTAYDFSTARAFDDAGIPVLL 60
Query: 118 VGDSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAV 177
VGDSAA VV+G+DTT+PIT++E++ R V RGA L+V DLPFG+YE QA+ TA
Sbjct: 61 VGDSAANVVYGYDTTVPITIDELIPLVRGVVRGAPHALVVADLPFGSYEEGPRQALATAT 120
Query: 178 RILKEGGMDAIKLEGGSPSRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTS 237
R LKE G A+KLEGG A + AGI VM H+G TPQ+++ LGGF+ QG+ +
Sbjct: 121 RFLKETGAHAVKLEGGERVAEQIAT-LSAAGIPVMAHIGFTPQSVNGLGGFKVQGRG-DA 178
Query: 238 AVKVVETALALQEVGCFSVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLL 297
A + + A+A+QE G FSVV+E VP +A T L IPT+GIGAGP C QVLV+ D+
Sbjct: 179 AEQTIHDAIAVQEAGAFSVVMEMVPAELATQITGKLTIPTVGIGAGPNCDAQVLVWQDMA 238
Query: 298 GMMQHPHHAKVTPKFCKQFARVGDVINKALLEYKEEVTNGSFPGPSHS 345
G+ + T KF K+F VG + +A +Y +EV G FP HS
Sbjct: 239 GLT-----SGRTAKFVKRFGDVGAELRRAASQYADEVAAGVFPAEEHS 281
>sp|B9ML78|PANB_CALBD 3-methyl-2-oxobutanoate hydroxymethyltransferase
OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 /
DSM 6725 / Z-1320) GN=panB PE=3 SV=1
Length = 264
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 173/269 (64%), Gaps = 7/269 (2%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
+VT L +K + GE ITM+TAYDY A DS +DI LVGDS MV+ G+D+T+P+T
Sbjct: 2 NKVTTKTLFEKKQKGEKITMITAYDYTFAKIFDSCSVDILLVGDSLGMVILGYDSTIPVT 61
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPS 196
+++M H RAV+RGAK ++V D+PF +Y ++ +AV A R+++ G A+K+E G
Sbjct: 62 MDDMEHHVRAVSRGAKYSMVVADMPFLSYHTTIEEAVKNAGRLIRAGAY-AVKME-GCDD 119
Query: 197 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSV 256
+++A I VMGH+GLTPQ++++ GG+ + K A K+VE A L++ G F++
Sbjct: 120 VYDKIEAVIKAQIPVMGHLGLTPQSVNIFGGYDLRAKEEAEAKKLVEDAKKLEKAGVFAI 179
Query: 257 VLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQF 316
VLE VP VA +L +P IGIGAGP+C GQVLV +D+LGM + PKF K++
Sbjct: 180 VLEKVPSHVAKEVQRSLNVPVIGIGAGPYCDGQVLVCYDMLGM-----YEDFKPKFVKRY 234
Query: 317 ARVGDVINKALLEYKEEVTNGSFPGPSHS 345
A VG++I A+ Y EEV G FPG HS
Sbjct: 235 AEVGNMIKDAVTRYIEEVKKGEFPGKEHS 263
>sp|A1AUV8|PANB_PELPD 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Pelobacter
propionicus (strain DSM 2379) GN=panB PE=3 SV=1
Length = 269
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/270 (46%), Positives = 176/270 (65%), Gaps = 7/270 (2%)
Query: 76 NQRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPI 135
++VT+ + + + ITM+TAYDYP A +DS G+D LVGDS +V GHD TL +
Sbjct: 5 RKKVTIPDILKMKQERRRITMMTAYDYPFARLVDSGGVDAILVGDSLGVVFSGHDNTLSV 64
Query: 136 TLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP 195
T++EM+ H RAVAR + +LV D+PF +Y+ S +A R+++EGG A+K+EGG
Sbjct: 65 TMDEMIYHTRAVARAKPQAVLVTDMPFMSYQVSVEEACRNCGRMIQEGGAQAVKIEGGM- 123
Query: 196 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFS 255
+ R + I VMGH+GLTPQ+I +GG+R QG+ A +++E ALA+Q G FS
Sbjct: 124 NMSHVIRAVTSIDIPVMGHIGLTPQSIHRMGGYRVQGRK-EQAERIMEDALAVQAAGAFS 182
Query: 256 VVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQ 315
+VLE +P +AA+ T+ L IPTIGIGAGP C GQVLV HD+LG+ + K +PKF K+
Sbjct: 183 IVLEGIPSSLAASITAELSIPTIGIGAGPDCDGQVLVIHDILGLCE-----KYSPKFVKR 237
Query: 316 FARVGDVINKALLEYKEEVTNGSFPGPSHS 345
+A + VI A+ Y EEV +G+FP HS
Sbjct: 238 YAELAPVITDAVNRYVEEVRSGAFPTEEHS 267
>sp|A8A9H3|PANB_IGNH4 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Ignicoccus
hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
GN=panB PE=3 SV=1
Length = 263
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 177/268 (66%), Gaps = 8/268 (2%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
++VT+ + +K+KNGE I MVTAYDYP A +D AG+D+ LVGDS MVV G+ +T +T
Sbjct: 2 KKVTIRDIMKKYKNGEKIVMVTAYDYPFAKLVDEAGVDMILVGDSLGMVVLGYPSTNQVT 61
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPS 196
+++ML H AVAR + ++VGD+PFG+YE S +AV AV +++ G +A+KLEGG
Sbjct: 62 MKDMLHHVAAVARANPKAMIVGDMPFGSYEVSEEEAVRNAVELVR-AGAEAVKLEGGK-E 119
Query: 197 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSV 256
IV+AGI VMGH+GLTPQ LGG+R +GK A +++E A AL+E G FS+
Sbjct: 120 VADKVEAIVKAGIPVMGHLGLTPQKRHALGGYRLRGKTEEEARELLEDAKALEEAGVFSI 179
Query: 257 VLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQF 316
VLE V VA T + +PTI IGAGP+CSGQVLV HD+LG+ A +P F K++
Sbjct: 180 VLEFVKAEVAKKITEEVGVPTICIGAGPWCSGQVLVIHDILGL------APFSPPFAKKY 233
Query: 317 ARVGDVINKALLEYKEEVTNGSFPGPSH 344
G I +A+ ++ EEV +G FPG +
Sbjct: 234 FDCGKAIVEAVKKFAEEVRSGEFPGEGY 261
>sp|Q97F39|PANB_CLOAB 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=panB PE=3 SV=1
Length = 276
Score = 241 bits (616), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/278 (45%), Positives = 179/278 (64%), Gaps = 12/278 (4%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
+ T T K K E + M+TAYDY +A +DS I+ LVGDS MV G++ TL +T
Sbjct: 2 KNTTETFKNSKFKK-EKLVMLTAYDYSTAKIIDSCDINGILVGDSLGMVCLGYENTLSVT 60
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSP- 195
+E+M+ H +AV RGAK L+V DLPF +Y++S AV A R++KE G AIKLEGG+
Sbjct: 61 MEDMIHHTKAVVRGAKSTLIVADLPFMSYQTSVYDAVFNAGRLVKEAGATAIKLEGGALV 120
Query: 196 -SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCF 254
RI A IV+A I VMGH+GLTPQ+++ GGF+ QGKN++ A +++E A ++ G F
Sbjct: 121 CDRIKA---IVDAQIPVMGHIGLTPQSVNAFGGFKIQGKNISKAKELIEDAKKIEAAGAF 177
Query: 255 SVVLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCK 314
++ LE +P +A T ++ IPTIGIGAG C GQ+LVY D+LGM + + PKF K
Sbjct: 178 AITLEGIPEKLAKIITESITIPTIGIGAGKHCDGQILVYQDMLGMF-----SDLAPKFVK 232
Query: 315 QFARVGDVINKALLEYKEEVTNGSFPGPSHSPYKMSSS 352
++ +GD + +A Y +EV G+FP +HS +K+ S
Sbjct: 233 RYGNIGDDMKEAFNSYAKEVREGTFPDEAHS-FKIDQS 269
>sp|A5FAQ5|PANB_FLAJ1 3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Flavobacterium
johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
GN=panB PE=3 SV=1
Length = 272
Score = 241 bits (614), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 176/268 (65%), Gaps = 6/268 (2%)
Query: 77 QRVTLTHLRQKHKNGEPITMVTAYDYPSAVHLDSAGIDICLVGDSAAMVVHGHDTTLPIT 136
+R+T L + NGE I+M+TAYDY A +D+AG+D+ LVGDSA+ V+ GH+TTLPIT
Sbjct: 9 KRITTKSLIEMKSNGEKISMLTAYDYTMAKIVDTAGVDVILVGDSASNVMAGHETTLPIT 68
Query: 137 LEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRILKEGGMDAIKLEGGSPS 196
L++M+ H +V R +R L+V DLPFG+Y+S +A+ +A+RI+KE G A+KLEGG
Sbjct: 69 LDQMIYHASSVVRAVERGLVVVDLPFGSYQSDPKEALRSAIRIMKESGAHAVKLEGGKEI 128
Query: 197 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSV 256
+ + + I+ AGI VMGH+GLTPQ+I G + + K A K++E A L++VGCF V
Sbjct: 129 K-ESIKKILNAGIPVMGHLGLTPQSIYKFGTYSVRAKEEQEAEKLIEDAQMLEKVGCFGV 187
Query: 257 VLECVPPPVAAAATSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQF 316
VLE +P +A ++ IP IGIGAG GQVLV HD+LGM + + +P+F +++
Sbjct: 188 VLEKIPADLAKKVADSISIPVIGIGAGGAVDGQVLVIHDMLGM-----NNEFSPRFLRRY 242
Query: 317 ARVGDVINKALLEYKEEVTNGSFPGPSH 344
+ + + KA+ +Y +V + FP S
Sbjct: 243 LNLYEEMTKAIGQYAADVKSSDFPNASE 270
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,902,604
Number of Sequences: 539616
Number of extensions: 6001942
Number of successful extensions: 17718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 15745
Number of HSP's gapped (non-prelim): 603
length of query: 384
length of database: 191,569,459
effective HSP length: 119
effective length of query: 265
effective length of database: 127,355,155
effective search space: 33749116075
effective search space used: 33749116075
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)