Query 016683
Match_columns 384
No_of_seqs 401 out of 3150
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 17:41:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016683.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016683hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 2.4E-46 8.2E-51 333.6 34.4 260 12-280 3-280 (285)
2 3d9h_A CDNA FLJ77766, highly s 100.0 4.5E-47 1.5E-51 338.9 25.0 270 5-277 6-277 (285)
3 1n11_A Ankyrin; clathrin, BAND 100.0 1.9E-45 6.6E-50 348.3 35.3 294 9-315 9-304 (437)
4 1n11_A Ankyrin; clathrin, BAND 100.0 1E-44 3.6E-49 343.3 35.1 251 16-276 49-334 (437)
5 4g8k_A 2-5A-dependent ribonucl 100.0 4.9E-44 1.7E-48 327.1 36.9 289 11-317 22-329 (337)
6 3utm_A Tankyrase-1; tankyrase, 100.0 8.2E-45 2.8E-49 333.6 30.2 282 3-294 13-320 (351)
7 1yyh_A HN1;, notch 1, ankyrin 100.0 8.3E-45 2.8E-49 318.7 24.2 227 50-277 4-247 (253)
8 2xai_A ASB-9, ankyrin repeat a 100.0 3.9E-44 1.3E-48 315.8 26.2 220 55-277 2-221 (261)
9 1k1a_A B-cell lymphoma 3-encod 100.0 2.6E-44 8.9E-49 312.9 23.5 227 50-276 3-239 (241)
10 2fo1_E LIN-12 protein; beta-ba 100.0 4.9E-45 1.7E-49 338.1 17.8 255 12-278 92-371 (373)
11 3b7b_A Euchromatic histone-lys 100.0 4.4E-43 1.5E-47 304.5 26.7 223 50-273 5-230 (237)
12 1wdy_A 2-5A-dependent ribonucl 100.0 3.7E-42 1.3E-46 306.5 30.3 260 55-317 4-281 (285)
13 3aji_A 26S proteasome non-ATPa 100.0 5.7E-43 1.9E-47 302.6 24.2 224 53-276 3-228 (231)
14 1oy3_D Transcription factor in 100.0 1.1E-42 3.7E-47 309.8 24.1 246 49-296 2-267 (282)
15 3utm_A Tankyrase-1; tankyrase, 100.0 6.1E-42 2.1E-46 314.4 26.4 270 50-322 18-313 (351)
16 3ljn_A Hypothetical protein; a 100.0 2.9E-43 9.9E-48 325.4 17.7 225 50-277 14-268 (364)
17 2xai_A ASB-9, ankyrin repeat a 100.0 2.5E-42 8.7E-47 304.2 22.3 247 14-274 3-259 (261)
18 4b93_B Ankyrin repeat domain-c 100.0 6.1E-43 2.1E-47 308.9 17.5 220 51-273 6-236 (269)
19 3ljn_A Hypothetical protein; a 100.0 7.2E-43 2.5E-47 322.8 17.4 261 3-275 9-311 (364)
20 3aji_A 26S proteasome non-ATPa 100.0 2.4E-41 8.1E-46 292.4 25.5 223 15-246 7-231 (231)
21 3eu9_A Huntingtin-interacting 100.0 7.9E-41 2.7E-45 290.4 25.0 227 51-278 4-235 (240)
22 4g8k_A 2-5A-dependent ribonucl 100.0 7.4E-40 2.5E-44 299.4 30.5 251 14-279 59-327 (337)
23 2dzn_A Probable 26S proteasome 100.0 9.8E-41 3.3E-45 287.9 23.1 215 56-274 2-226 (228)
24 3d9h_A CDNA FLJ77766, highly s 100.0 1.9E-40 6.6E-45 295.9 25.2 252 53-311 12-275 (285)
25 1yyh_A HN1;, notch 1, ankyrin 100.0 1.8E-40 6.1E-45 291.1 23.8 224 11-243 7-246 (253)
26 1s70_B 130 kDa myosin-binding 100.0 3.5E-41 1.2E-45 302.8 19.7 244 20-264 4-276 (299)
27 2fo1_E LIN-12 protein; beta-ba 100.0 1.9E-41 6.4E-46 314.1 18.2 296 12-314 35-371 (373)
28 1k1a_A B-cell lymphoma 3-encod 100.0 9.3E-41 3.2E-45 290.4 20.6 227 12-244 7-240 (241)
29 2f8y_A Notch homolog 1, transl 100.0 2.6E-40 8.7E-45 284.3 22.7 211 67-278 2-216 (223)
30 4b93_B Ankyrin repeat domain-c 100.0 3.4E-41 1.2E-45 297.7 16.4 233 13-247 10-246 (269)
31 3kea_A K1L; tropism, ANK repea 100.0 5.8E-41 2E-45 299.3 16.2 237 21-278 6-246 (285)
32 2f8y_A Notch homolog 1, transl 100.0 3.7E-39 1.3E-43 277.1 22.4 214 25-247 2-218 (223)
33 3b7b_A Euchromatic histone-lys 100.0 1.2E-38 4.1E-43 276.5 25.7 219 13-241 10-231 (237)
34 1oy3_D Transcription factor in 100.0 8.5E-39 2.9E-43 284.6 23.8 237 83-322 2-258 (282)
35 3eu9_A Huntingtin-interacting 100.0 3.2E-38 1.1E-42 273.9 25.0 226 13-248 8-238 (240)
36 2dzn_A Probable 26S proteasome 100.0 2.8E-38 9.5E-43 272.5 24.1 215 15-241 3-226 (228)
37 3kea_A K1L; tropism, ANK repea 100.0 1.4E-38 4.9E-43 283.8 19.7 237 65-315 8-247 (285)
38 2rfa_A Transient receptor pote 100.0 1.5E-37 5.1E-42 268.7 22.1 206 55-279 2-223 (232)
39 1ikn_D Protein (I-kappa-B-alph 100.0 2.1E-39 7.3E-44 281.2 9.3 208 51-258 3-224 (236)
40 2rfa_A Transient receptor pote 100.0 8.3E-37 2.8E-41 264.1 20.8 206 89-316 2-224 (232)
41 3hra_A Ankyrin repeat family p 100.0 5E-36 1.7E-40 253.2 24.9 191 54-276 3-201 (201)
42 1s70_B 130 kDa myosin-binding 100.0 2.8E-36 9.5E-41 270.9 22.1 219 13-242 39-286 (299)
43 3hra_A Ankyrin repeat family p 100.0 1.5E-35 5.2E-40 250.3 25.2 188 89-311 4-200 (201)
44 1ikn_D Protein (I-kappa-B-alph 100.0 2.1E-37 7.2E-42 268.6 11.8 196 84-279 2-210 (236)
45 2pnn_A Transient receptor pote 100.0 1.3E-36 4.4E-41 269.6 14.7 205 50-254 7-268 (273)
46 1sw6_A Regulatory protein SWI6 100.0 3.5E-37 1.2E-41 280.1 10.8 231 25-264 58-327 (327)
47 2etb_A Transient receptor pote 100.0 5.4E-36 1.8E-40 263.0 15.8 203 55-277 1-245 (256)
48 2etb_A Transient receptor pote 100.0 5.1E-36 1.7E-40 263.1 13.2 202 89-313 1-245 (256)
49 4gpm_A Engineered protein OR26 100.0 1.6E-34 5.5E-39 236.3 21.1 157 58-215 6-163 (169)
50 4gpm_A Engineered protein OR26 100.0 1.7E-34 5.7E-39 236.2 20.8 156 92-247 6-163 (169)
51 2pnn_A Transient receptor pote 100.0 8.7E-36 3E-40 264.2 13.2 205 80-284 3-264 (273)
52 3jxi_A Vanilloid receptor-rela 100.0 6.2E-34 2.1E-38 250.4 15.7 207 53-278 2-250 (260)
53 1sw6_A Regulatory protein SWI6 100.0 1.9E-35 6.4E-40 268.8 6.1 251 15-289 20-318 (327)
54 3jxi_A Vanilloid receptor-rela 100.0 5E-34 1.7E-38 251.0 13.8 206 87-315 2-251 (260)
55 2rfm_A Putative ankyrin repeat 100.0 5.3E-32 1.8E-36 226.9 18.7 163 48-211 27-190 (192)
56 4hbd_A KN motif and ankyrin re 100.0 1.2E-32 4E-37 244.3 15.3 195 55-277 75-274 (276)
57 4hbd_A KN motif and ankyrin re 100.0 6.3E-33 2.2E-37 246.0 13.3 186 125-312 78-273 (276)
58 2rfm_A Putative ankyrin repeat 100.0 1.3E-31 4.5E-36 224.5 17.4 161 83-275 28-189 (192)
59 3v30_A DNA-binding protein rfx 100.0 1.6E-31 5.5E-36 219.9 17.3 169 56-256 2-171 (172)
60 3v30_A DNA-binding protein rfx 100.0 1.2E-31 4.1E-36 220.7 16.4 154 125-278 4-160 (172)
61 3v31_A Ankyrin repeat family A 100.0 4.8E-31 1.6E-35 216.0 19.7 158 55-213 2-160 (167)
62 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.9E-31 2E-35 215.9 20.1 159 52-211 10-169 (169)
63 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.6E-31 1.6E-35 214.9 17.4 155 56-212 5-161 (162)
64 1ihb_A P18-INK4C(INK6), cyclin 100.0 6.1E-31 2.1E-35 214.1 17.5 156 89-245 4-162 (162)
65 2y1l_E Darpin-8.4; hydrolase-i 100.0 2E-30 6.9E-35 212.7 19.7 157 87-275 11-168 (169)
66 3v31_A Ankyrin repeat family A 100.0 9.6E-31 3.3E-35 214.1 17.5 155 89-275 2-157 (167)
67 3f6q_A Integrin-linked protein 100.0 1.4E-30 4.6E-35 215.8 17.2 163 54-216 3-166 (179)
68 3twr_A Tankyrase-2; ankyrin re 100.0 8E-31 2.7E-35 214.2 15.3 160 52-212 4-164 (165)
69 1awc_B Protein (GA binding pro 100.0 2.6E-30 8.9E-35 208.4 18.0 148 125-272 4-152 (153)
70 1awc_B Protein (GA binding pro 100.0 8.2E-30 2.8E-34 205.5 19.5 150 56-207 2-152 (153)
71 2aja_A Ankyrin repeat family p 100.0 1.2E-33 4.2E-38 259.6 -3.6 235 14-276 65-342 (376)
72 2vge_A RELA-associated inhibit 100.0 1.4E-33 4.7E-38 243.0 -3.6 197 73-273 2-208 (229)
73 3f6q_A Integrin-linked protein 100.0 6E-30 2.1E-34 211.9 17.3 166 88-253 3-171 (179)
74 2vge_A RELA-associated inhibit 100.0 1.3E-33 4.6E-38 243.1 -5.7 187 50-240 15-208 (229)
75 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.5E-29 5.1E-34 204.6 18.3 153 56-210 2-155 (156)
76 3twr_A Tankyrase-2; ankyrin re 100.0 1.9E-29 6.5E-34 206.0 16.6 162 8-179 2-164 (165)
77 2aja_A Ankyrin repeat family p 100.0 1.2E-33 4E-38 259.8 -10.5 238 14-275 92-371 (376)
78 1bd8_A P19INK4D CDK4/6 inhibit 100.0 8.8E-29 3E-33 200.0 17.6 152 90-275 2-155 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.7E-30 6E-35 225.4 6.5 184 55-274 4-200 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.2E-30 2.8E-34 221.2 6.7 134 53-187 34-171 (239)
81 1d9s_A Cyclin-dependent kinase 99.9 2.4E-27 8.3E-32 187.0 13.4 133 80-213 2-136 (136)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 2.1E-27 7.2E-32 192.0 11.4 143 50-194 6-150 (156)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 6.4E-27 2.2E-31 189.1 12.2 144 84-260 6-151 (156)
84 1d9s_A Cyclin-dependent kinase 99.9 1.4E-26 4.8E-31 182.6 13.7 119 157-276 14-134 (136)
85 3t8k_A Uncharacterized protein 99.9 2.3E-27 7.8E-32 197.0 7.5 160 14-211 6-177 (186)
86 3t8k_A Uncharacterized protein 99.9 2.9E-27 1E-31 196.4 8.1 119 157-275 40-176 (186)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-25 9.6E-30 172.3 17.2 124 55-179 1-125 (126)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.8E-25 2E-29 170.5 17.1 125 89-213 1-126 (126)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 2.1E-25 7.3E-30 175.8 14.9 120 157-276 16-136 (136)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 2.9E-25 1E-29 175.0 15.4 125 53-178 11-136 (136)
91 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-25 5.6E-30 176.7 9.9 131 147-277 2-133 (137)
92 3c5r_A BARD-1, BRCA1-associate 99.9 4.6E-25 1.6E-29 174.1 9.8 122 52-174 6-128 (137)
93 3ui2_A Signal recognition part 99.9 1.1E-24 3.7E-29 189.3 10.5 140 89-245 44-185 (244)
94 3deo_A Signal recognition part 99.9 1.8E-24 6.3E-29 179.5 10.9 111 52-164 40-152 (183)
95 3deo_A Signal recognition part 99.9 2.5E-24 8.6E-29 178.6 10.8 139 87-242 41-181 (183)
96 3ui2_A Signal recognition part 99.9 5.2E-24 1.8E-28 185.1 13.1 144 53-215 42-187 (244)
97 3ehr_A Osteoclast-stimulating 99.9 2.4E-24 8.2E-29 184.5 9.2 139 49-188 66-206 (222)
98 2b0o_E UPLC1; arfgap, structur 99.9 8.7E-24 3E-28 189.1 12.5 144 15-168 152-299 (301)
99 3aaa_C Myotrophin, protein V-1 99.9 1.2E-23 3.9E-28 162.7 10.9 110 53-163 4-114 (123)
100 3aaa_C Myotrophin, protein V-1 99.9 1.3E-23 4.5E-28 162.4 11.0 112 156-267 8-120 (123)
101 2b0o_E UPLC1; arfgap, structur 99.9 1.6E-23 5.5E-28 187.3 11.9 143 86-233 147-299 (301)
102 1dcq_A PYK2-associated protein 99.9 1.5E-22 5.2E-27 179.0 16.7 196 80-279 51-264 (278)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.6E-22 8.9E-27 146.9 13.0 93 55-148 1-93 (93)
104 1dcq_A PYK2-associated protein 99.9 4E-22 1.4E-26 176.3 15.8 134 11-149 127-264 (278)
105 3ehr_A Osteoclast-stimulating 99.9 5.2E-23 1.8E-27 176.1 9.6 131 89-250 72-203 (222)
106 3lvq_E ARF-GAP with SH3 domain 99.9 1.2E-21 4.1E-26 187.7 15.9 139 16-164 134-276 (497)
107 3jue_A Arfgap with coiled-coil 99.9 7.8E-22 2.7E-26 180.4 13.8 158 89-246 198-365 (368)
108 3jue_A Arfgap with coiled-coil 99.9 1.9E-21 6.6E-26 177.8 14.1 147 119-265 195-349 (368)
109 3lvq_E ARF-GAP with SH3 domain 99.9 3.2E-21 1.1E-25 184.8 15.6 133 57-196 133-275 (497)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.5E-21 1.2E-25 140.9 11.5 90 188-277 2-92 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.8 2.4E-21 8.2E-26 147.7 7.3 104 51-155 4-107 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 1.4E-20 5E-25 143.4 9.0 107 85-191 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 4E-19 1.4E-23 134.1 10.8 96 46-142 14-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1.5E-18 5.3E-23 130.9 10.0 91 182-272 18-109 (110)
115 4gco_A Protein STI-1; structur 83.3 2.4 8.2E-05 31.1 5.8 35 333-367 12-46 (126)
116 4gcn_A Protein STI-1; structur 75.1 6.8 0.00023 28.5 6.0 34 333-366 7-40 (127)
117 2hr2_A Hypothetical protein; a 72.0 5.1 0.00017 31.0 4.7 36 331-366 8-43 (159)
118 3rkv_A Putative peptidylprolyl 69.8 5.7 0.0002 30.1 4.7 33 331-363 8-40 (162)
119 3mkq_B Coatomer subunit alpha; 65.3 28 0.00095 27.4 7.7 133 12-176 6-139 (177)
120 1gp8_A Protein (scaffolding pr 53.0 12 0.00041 20.8 2.5 25 13-37 12-36 (40)
121 3upv_A Heat shock protein STI1 52.3 26 0.00089 24.7 5.4 33 334-366 4-36 (126)
122 2w2u_A Hypothetical P60 katani 51.7 29 0.00097 23.4 4.9 35 330-364 15-49 (83)
123 3mkq_B Coatomer subunit alpha; 47.7 58 0.002 25.5 6.8 95 20-145 43-140 (177)
124 2v6y_A AAA family ATPase, P60 41.4 44 0.0015 22.4 4.5 33 332-364 9-41 (83)
125 2cpt_A SKD1 protein, vacuolar 40.2 45 0.0015 24.1 4.7 33 332-364 16-48 (117)
126 4g26_A Pentatricopeptide repea 39.3 27 0.00093 32.6 4.4 110 16-138 30-158 (501)
127 4a5x_A MITD1, MIT domain-conta 38.5 51 0.0018 22.3 4.5 31 333-363 15-45 (86)
128 3k49_A MRNA-binding protein PU 37.6 38 0.0013 30.1 4.9 92 13-110 41-134 (369)
129 2v6x_A Vacuolar protein sortin 36.7 56 0.0019 21.9 4.5 31 333-363 12-42 (85)
130 1wfd_A Hypothetical protein 15 33.2 67 0.0023 22.0 4.5 32 333-364 14-45 (93)
131 2l6j_A TPR repeat-containing p 33.2 89 0.0031 20.8 5.5 26 339-364 9-34 (111)
132 2v5f_A Prolyl 4-hydroxylase su 32.2 56 0.0019 22.4 4.2 27 338-364 9-35 (104)
133 2fbn_A 70 kDa peptidylprolyl i 32.2 1.2E+02 0.0041 23.3 6.7 38 329-366 33-70 (198)
134 3sz7_A HSC70 cochaperone (SGT) 31.8 51 0.0018 24.5 4.3 33 333-365 10-42 (164)
135 3zrh_A Ubiquitin thioesterase 25.1 1.5E+02 0.0052 26.6 6.3 62 162-241 29-90 (454)
136 3zrh_A Ubiquitin thioesterase 23.4 2.2E+02 0.0075 25.6 6.9 22 62-84 28-49 (454)
137 1a17_A Serine/threonine protei 22.5 2.2E+02 0.0074 20.4 6.4 35 331-365 10-44 (166)
138 3bee_A Putative YFRE protein; 22.3 58 0.002 22.0 2.6 28 339-366 48-75 (93)
139 1ihg_A Cyclophilin 40; ppiase 21.8 1.4E+02 0.0048 26.2 5.8 36 327-362 216-251 (370)
140 1kt0_A FKBP51, 51 kDa FK506-bi 21.5 1.5E+02 0.0053 26.8 6.2 36 332-367 266-301 (457)
141 3q49_B STIP1 homology and U bo 20.9 1.5E+02 0.0052 20.6 5.0 28 338-365 13-40 (137)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-46 Score=333.61 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=241.8
Q ss_pred hHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCC
Q 016683 12 RERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGE 91 (384)
Q Consensus 12 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 91 (384)
.++.++|+.|++.|++++|++|++. |.++ ....+..|.||||+|+..|+.+++++|++. |++++..+..|.
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~----g~~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~ 73 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEG----GANV----NFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGA 73 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHT----TCCT----TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCC
T ss_pred cccchHHHHHHHcCCHHHHHHHHHc----CCCc----ccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCC
Confidence 4677899999999999999999987 3332 122377899999999999999999999998 999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC----------C-CCCCHhH
Q 016683 92 TPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSE----------S-DAGTPLI 160 (384)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~----------~-~~~~~l~ 160 (384)
||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. + .+.||||
T Consensus 74 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~ 153 (285)
T 1wdy_A 74 TPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 153 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHH
Confidence 9999999999999999999999999999999999999999999999999999999998765 2 3449999
Q ss_pred HHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHH
Q 016683 161 WAAGHGQQEAVKVLLEH-HANPNAETEDNITPLLSAVAAGS----LTCLDLLIQAGANANIV-AGGATPLHIAADIGSTE 234 (384)
Q Consensus 161 ~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~----~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~ 234 (384)
+|+..|+.+++++|++. |++++..+..|.||||.|+..++ .+++++|+++|++++.. ..|.||||+|+..|+.+
T Consensus 154 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 233 (285)
T 1wdy_A 154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG 233 (285)
T ss_dssp HHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 99999999999999997 99999999999999999999999 99999999999999987 78999999999999999
Q ss_pred HHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCCC
Q 016683 235 IIKCLLK-AGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSEDP 280 (384)
Q Consensus 235 ~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 280 (384)
++++|++ .|++++.+|..|.||||+|+..|+.+++++|++++....
T Consensus 234 ~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 234 LVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred HHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 9999999 899999999999999999999999999999999887543
No 2
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-47 Score=338.86 Aligned_cols=270 Identities=23% Similarity=0.270 Sum_probs=218.2
Q ss_pred chhhhhhhHHHHHHHHHHHcCChHHHHHHHHHhhhcC--CCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCC
Q 016683 5 ASHALAVRERVQQFLNAACTGNLDLLKKIAKQLDDQG--KGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLD 82 (384)
Q Consensus 5 ~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~--~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 82 (384)
..+.-+...+.+.||.|+..|+.+.+..++....... ..+.......+|..|.||||+|+..|+.+++++|++. |++
T Consensus 6 ~~~~~~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~ 84 (285)
T 3d9h_A 6 HHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQ-GWA 84 (285)
T ss_dssp ------------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHT-TCC
T ss_pred ccccccchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHC-CCC
Confidence 3455677888999999999999988888776533211 1122233466889999999999999999999999997 999
Q ss_pred CcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHH
Q 016683 83 VDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWA 162 (384)
Q Consensus 83 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A 162 (384)
++.+|..|.||||+|+..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++....+.||||+|
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A 164 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEA 164 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHH
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887777999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCchHHHHHHhhCCHHHHHHHHHC
Q 016683 163 AGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIVAGGATPLHIAADIGSTEIIKCLLKA 242 (384)
Q Consensus 163 ~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 242 (384)
+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++....|.||||+|+..|+.+++++|+++
T Consensus 165 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 244 (285)
T 3d9h_A 165 ARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDF 244 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999778899999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCC
Q 016683 243 GADPNVTDEDGQKPIQVAAARGNREAVEILFPLTS 277 (384)
Q Consensus 243 ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 277 (384)
|++++.+|..|+||||+|+ ++.+++++|++...
T Consensus 245 gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~ 277 (285)
T 3d9h_A 245 GADTQAKNAEGKRPVELVP--PESPLAQLFLEREG 277 (285)
T ss_dssp TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-
T ss_pred CCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhc
Confidence 9999999999999999999 55799999998744
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-45 Score=348.28 Aligned_cols=294 Identities=31% Similarity=0.455 Sum_probs=236.8
Q ss_pred hhhhHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCC
Q 016683 9 LAVRERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDE 88 (384)
Q Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 88 (384)
.....+.++||.||..|++++|++|++. |.++ +..+..|.||||+|+..|+.+++++|++. |++++.++.
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~----g~~~-----~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~ 78 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLLQR----GASP-----NVSNVKVETPLHMAARAGHTEVAKYLLQN-KAKVNAKAK 78 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHHHT----TCCS-----CCSSSCCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCT
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHc----CCCC-----CCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCC
Confidence 3445667899999999999999999987 4433 45678899999999999999999999998 999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCC
Q 016683 89 DGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQ 167 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~ 167 (384)
.|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|++++.+.+..+..+ ||||+|+..|+
T Consensus 79 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~ 158 (437)
T 1n11_A 79 DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGK 158 (437)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999988877655544 89999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCC
Q 016683 168 QEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADP 246 (384)
Q Consensus 168 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 246 (384)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|++.|+++
T Consensus 159 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 238 (437)
T 1n11_A 159 VRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA 238 (437)
T ss_dssp HHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999888888999999999999999999999888888766 67888888888888888888888888888
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCCCCCCCCchhhHHHHHHhhhchhHHHHHhhhhcCCCC
Q 016683 247 NVTDEDGQKPIQVAAARGNREAVEILFPLTSEDPSIPKWTVDGILEYMQSESGKQLEETRNLKENNAPK 315 (384)
Q Consensus 247 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (384)
+..+..|.||||+|+..|+.+++++|++.+..... .+..+ .+.+..+......+..+.+.+.+...
T Consensus 239 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g--~t~L~~A~~~~~~~~~~~Ll~~g~~~ 304 (437)
T 1n11_A 239 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL-GNKSG--LTPLHLVAQEGHVPVADVLIKHGVMV 304 (437)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTC--CCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCC-CCCCC--CCHHHHHHHcCCHHHHHHHHhCCccC
Confidence 88888888888888888888888888876554322 22222 22233333334444555555544433
No 4
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1e-44 Score=343.25 Aligned_cols=251 Identities=32% Similarity=0.447 Sum_probs=113.5
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHH
Q 016683 16 QQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLL 95 (384)
Q Consensus 16 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 95 (384)
++||.|+..|+.+++++|++. |.++ +.++..|.||||+|+..|+.+++++|++. |++++..+..|.||||
T Consensus 49 t~L~~A~~~g~~~~v~~Ll~~----g~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L~ 118 (437)
T 1n11_A 49 TPLHMAARAGHTEVAKYLLQN----KAKV-----NAKAKDDQTPLHCAARIGHTNMVKLLLEN-NANPNLATTAGHTPLH 118 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHH----TCCS-----SCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhC----CCCC-----CCCCCCCCCHHHHHHHCCCHHHHHHHHhC-CCCCCCCCCCCCcHHH
Confidence 455555555555555555554 2221 23344455555555555555555555544 4444444444444444
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC----------------------
Q 016683 96 HAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSES---------------------- 153 (384)
Q Consensus 96 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~---------------------- 153 (384)
+|+..|+.++|++|++++++.+..+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 119 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 198 (437)
T 1n11_A 119 IAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198 (437)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4444444444444444444433333333333333333333333333333333333222
Q ss_pred -----------CCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCC
Q 016683 154 -----------DAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGG 220 (384)
Q Consensus 154 -----------~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g 220 (384)
..+ ||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|
T Consensus 199 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g 278 (437)
T 1n11_A 199 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG 278 (437)
T ss_dssp GGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTC
T ss_pred HhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCC
Confidence 111 3444444444444444444444444444444444444444444444444444444444433 334
Q ss_pred chHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCC
Q 016683 221 ATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLT 276 (384)
Q Consensus 221 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 276 (384)
.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 279 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 334 (437)
T 1n11_A 279 LTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 334 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC
Confidence 44444444444444444444444444444444555555555555555555555443
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.9e-44 Score=327.11 Aligned_cols=289 Identities=24% Similarity=0.336 Sum_probs=255.7
Q ss_pred hhHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhccc-CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCC
Q 016683 11 VRERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKD-ANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDED 89 (384)
Q Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 89 (384)
..++.++||.||+.|++++|++|++. |.++ +.++ ..|.||||+||..|+.++|++|++. |++++..+..
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~----Gadv-----n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~-ga~~~~~~~~ 91 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEG----GANV-----NFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKN 91 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH----TCCT-----TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTT
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHC----CCCC-----CccCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCchhhhccC
Confidence 34567899999999999999999998 5554 3444 4599999999999999999999998 9999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-----------CCCCH
Q 016683 90 GETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSES-----------DAGTP 158 (384)
Q Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~-----------~~~~~ 158 (384)
+.++++.++..+...++..+++.+++++..|..|.||||+|+..|+.+++++|+++|++++... .+.||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~ 171 (337)
T 4g8k_A 92 GATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 171 (337)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCH
T ss_pred CCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcH
Confidence 9999999999999999999999999999999999999999999999999999999999876432 23499
Q ss_pred hHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCcccc-CCCchHHHHHHhhCC
Q 016683 159 LIWAAGHGQQEAVKVLLE-HHANPNAETEDNITPLLSAVAAGS----LTCLDLLIQAGANANIV-AGGATPLHIAADIGS 232 (384)
Q Consensus 159 l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~----~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~ 232 (384)
||+|+..|+.+++++|++ .|++++..+..|.|+++.++..+. ..++++|+++|++++.. ..|+||||+|+..|+
T Consensus 172 L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~ 251 (337)
T 4g8k_A 172 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH 251 (337)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTC
T ss_pred HHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhh
Confidence 999999999999999995 699999999999999998886544 46889999999999987 789999999999999
Q ss_pred HHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCCCCCCCCchhhHHHHHHhhhchhHHHHHhhhhc
Q 016683 233 TEIIKCLLKA-GADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSEDPSIPKWTVDGILEYMQSESGKQLEETRNLKEN 311 (384)
Q Consensus 233 ~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (384)
.+++++|++. |++++.+|..|+||||+|+.+|+.++|++|++++...... + .+..+......+.++.|++.
T Consensus 252 ~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~------~--~L~~A~~~~~~~iv~~Ll~~ 323 (337)
T 4g8k_A 252 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG------D--LVMTARRNYDHSLVKVLLSH 323 (337)
T ss_dssp HHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC------C--HHHHHHHTTCHHHHHHHHHT
T ss_pred hHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC------C--HHHHHHHcCCHHHHHHHHHC
Confidence 9999999985 8999999999999999999999999999999988653221 1 45556666778889999999
Q ss_pred CCCCCC
Q 016683 312 NAPKDK 317 (384)
Q Consensus 312 ~~~~~~ 317 (384)
++..+-
T Consensus 324 GA~~d~ 329 (337)
T 4g8k_A 324 GAKEDF 329 (337)
T ss_dssp TCCC--
T ss_pred cCCCCC
Confidence 987763
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=8.2e-45 Score=333.56 Aligned_cols=282 Identities=28% Similarity=0.345 Sum_probs=232.0
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCC
Q 016683 3 PDASHALAVRERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLD 82 (384)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 82 (384)
|.+..........++||.||+.|+.+.|++++.. .....+.+|..|.||||+|+..|+.+++++|++. |++
T Consensus 13 ~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~--------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~ 83 (351)
T 3utm_A 13 PSAKAVLTGEYKKDELLEAARSGNEEKLMALLTP--------LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH-GAD 83 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCT--------TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHT-TCC
T ss_pred CceeeeeeccccchhHHHHHHcCCHHHHHHHHHh--------cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCC
Confidence 3444555667788999999999999999999875 1223466788999999999999999999999998 999
Q ss_pred CcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHH
Q 016683 83 VDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIW 161 (384)
Q Consensus 83 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~ 161 (384)
++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..+ +|+++
T Consensus 84 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~ 163 (351)
T 3utm_A 84 VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDM 163 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988766544 55443
Q ss_pred ---------------------HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCcccc
Q 016683 162 ---------------------AAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAA---GSLTCLDLLIQAGANANIV 217 (384)
Q Consensus 162 ---------------------A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~---~~~~~v~~Ll~~g~~~~~~ 217 (384)
++..++.+.++.++..+......+..|.||||+|+.. +..+++++|++.|++++..
T Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~ 243 (351)
T 3utm_A 164 APTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEK 243 (351)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCC
T ss_pred HhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCc
Confidence 4566677777777776665556677788888888887 4578888888888888766
Q ss_pred -CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCCCCCCCCchhhHHHHH
Q 016683 218 -AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSEDPSIPKWTVDGILEYM 294 (384)
Q Consensus 218 -~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 294 (384)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++.. ++..+..+.+...+.
T Consensus 244 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~~~~g~tal~~a 320 (351)
T 3utm_A 244 NKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD-PSIISLQGFTAAQMG 320 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCChhhhh
Confidence 6788888888888888888888888888888888888888888888888888888887654 344444455555554
No 7
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.3e-45 Score=318.68 Aligned_cols=227 Identities=28% Similarity=0.374 Sum_probs=182.1
Q ss_pred hcccCCCCcHHHHHHHcC-------------CHHHHHHHHHhCCCCCcC-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q 016683 50 DIKDANKRGALHFAAREG-------------KTDVCKYLLEELKLDVDT-QDEDGETPLLHAARQGHTETAKYLFEHGAN 115 (384)
Q Consensus 50 ~~~d~~g~t~L~~A~~~g-------------~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 115 (384)
+.+|.+|.||||+|+..| +.+++++|++. |.+++. .|..|.||||+|+..|+.++|++|+++|++
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~-g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc-cCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 567899999999999987 89999999998 888755 589999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Q 016683 116 PTIPSNLGATALHHSAGIGNIELLTYLLSKGA-EVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLL 193 (384)
Q Consensus 116 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 193 (384)
++..|..|.||||+|+..|+.+++++|++++. +++..+..+ ||||+|+..|+.+++++|++.|++++..+..|.||||
T Consensus 83 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 162 (253)
T 1yyh_A 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH 162 (253)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 99999999999999999999999999999987 777666555 9999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhh
Q 016683 194 SAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEIL 272 (384)
Q Consensus 194 ~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~L 272 (384)
+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|+.+|+.+++++|
T Consensus 163 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 163 WAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 016683 273 FPLTS 277 (384)
Q Consensus 273 l~~~~ 277 (384)
.....
T Consensus 243 ~~~~~ 247 (253)
T 1yyh_A 243 DLEHH 247 (253)
T ss_dssp HC---
T ss_pred HHHhh
Confidence 87654
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.9e-44 Score=315.83 Aligned_cols=220 Identities=26% Similarity=0.381 Sum_probs=209.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 016683 55 NKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIG 134 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 134 (384)
+|+||||+|+..|+.+++++|++. |++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 589999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q 016683 135 NIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANA 214 (384)
Q Consensus 135 ~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~ 214 (384)
+.+++++|+++|++++....+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 160 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV 160 (261)
T ss_dssp CHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 99999999999999988877789999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCC
Q 016683 215 NIVAGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTS 277 (384)
Q Consensus 215 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 277 (384)
+....|.||||+|+..|+.+++++|+++|++++.+|..|+||+|+|+.++ +++++|++.+.
T Consensus 161 ~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~ 221 (261)
T 2xai_A 161 NQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREG 221 (261)
T ss_dssp TCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-C
T ss_pred CCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccC
Confidence 97788999999999999999999999999999999999999999999665 48888887643
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.6e-44 Score=312.89 Aligned_cols=227 Identities=27% Similarity=0.353 Sum_probs=208.6
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHH---hCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH
Q 016683 50 DIKDANKRGALHFAAREGKTDVCKYLLE---ELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATA 126 (384)
Q Consensus 50 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 126 (384)
+.+|.+|.||||+||..|+.+++++|++ ..+.+++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA 82 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 5678999999999999999999999997 3599999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCC----CCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHcCC
Q 016683 127 LHHSAGIGNIELLTYLLSKGA----EVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAET-EDNITPLLSAVAAGS 200 (384)
Q Consensus 127 L~~A~~~~~~~~~~~Ll~~~~----~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~A~~~~~ 200 (384)
||+|+..|+.+++++|++.+. +++..+..+ ||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence 999999999999999999987 666555444 99999999999999999999999999988 889999999999999
Q ss_pred HHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCC
Q 016683 201 LTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLT 276 (384)
Q Consensus 201 ~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 276 (384)
.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||+|+|+..|+.++++.|.+.+
T Consensus 163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 163 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 99999999999999987 78999999999999999999999999999999999999999999999999999998754
No 10
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-45 Score=338.08 Aligned_cols=255 Identities=25% Similarity=0.371 Sum_probs=225.7
Q ss_pred hHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhccc-CCCCcHHHHHHHcCCHHHHHHHHH-------hCCCCC
Q 016683 12 RERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKD-ANKRGALHFAAREGKTDVCKYLLE-------ELKLDV 83 (384)
Q Consensus 12 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~-------~~~~~~ 83 (384)
..+.++||.|+..| .+++++|+.. ..+..| ..|.||||+|+..|+.+++++|+. ..|+++
T Consensus 92 ~~g~t~L~~Aa~~~-~~~~~~L~~~-----------~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v 159 (373)
T 2fo1_E 92 PESPIKLHTEAAGS-YAITEPITRE-----------SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV 159 (373)
T ss_dssp --CCCHHHHHHHSS-SCCCSCCSTT-----------TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT
T ss_pred CCCccHHHHHhcCC-chHHHHhccc-----------cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC
Confidence 34456788888844 4666655421 234556 789999999999999998888873 349999
Q ss_pred cCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC---CCCCCCCCCC-CHh
Q 016683 84 DTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKG---AEVDSESDAG-TPL 159 (384)
Q Consensus 84 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~---~~~~~~~~~~-~~l 159 (384)
|..|..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|++++ .+++..+..+ |||
T Consensus 160 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L 239 (373)
T 2fo1_E 160 NAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTAL 239 (373)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHH
T ss_pred cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999998 6777766555 999
Q ss_pred HHHHHcC---CHHHHHHHHhCCCCCCC--------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcccc-CCCchHHHH
Q 016683 160 IWAAGHG---QQEAVKVLLEHHANPNA--------ETEDNITPLLSAVAAGSLTCLDLLIQAG-ANANIV-AGGATPLHI 226 (384)
Q Consensus 160 ~~A~~~~---~~~~~~~Ll~~~~~~~~--------~~~~g~t~l~~A~~~~~~~~v~~Ll~~g-~~~~~~-~~g~t~L~~ 226 (384)
|+|+..+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.+ ++++.. ..|.||||+
T Consensus 240 ~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~ 319 (373)
T 2fo1_E 240 MIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML 319 (373)
T ss_dssp HHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHH
T ss_pred HHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHH
Confidence 9999998 89999999999999886 5678999999999999999999999886 999887 789999999
Q ss_pred HHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCC
Q 016683 227 AADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSE 278 (384)
Q Consensus 227 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 278 (384)
|+..|+.++|++|+++|++++.+|..|.||||+|+.+|+.+++++|++++++
T Consensus 320 A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 320 AAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999999999999999999999999999999999999999999987654
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.4e-43 Score=304.52 Aligned_cols=223 Identities=32% Similarity=0.516 Sum_probs=211.9
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 016683 50 DIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHH 129 (384)
Q Consensus 50 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 129 (384)
+.+|.+|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL 83 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence 56788999999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 016683 130 SAGIGNIELLTYLLSKG-AEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLL 207 (384)
Q Consensus 130 A~~~~~~~~~~~Ll~~~-~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L 207 (384)
|+..|+.+++++|++.+ .+++..+..+ ||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999998 7777666555 999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhc
Q 016683 208 IQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILF 273 (384)
Q Consensus 208 l~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 273 (384)
+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+.+..++
T Consensus 164 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 164 LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999987 78999999999999999999999999999999999999999999999986655554
No 12
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-42 Score=306.48 Aligned_cols=260 Identities=28% Similarity=0.345 Sum_probs=236.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q 016683 55 NKRGALHFAAREGKTDVCKYLLEELKLDVDTQ-DEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGI 133 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 133 (384)
+|.||||.|+..|+.+++++|++. |.+++.. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 478999999999999999999998 9999988 78899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCC----------CCCCCCHHHHHHHcCCHH
Q 016683 134 GNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAE----------TEDNITPLLSAVAAGSLT 202 (384)
Q Consensus 134 ~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~----------~~~g~t~l~~A~~~~~~~ 202 (384)
|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|++.|++++.. +..|.||||.|+..|+.+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 162 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 162 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHH
Confidence 99999999999999998877655 9999999999999999999999999887 778999999999999999
Q ss_pred HHHHHHHc-CCCcccc-CCCchHHHHHHhhCC----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCC
Q 016683 203 CLDLLIQA-GANANIV-AGGATPLHIAADIGS----TEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLT 276 (384)
Q Consensus 203 ~v~~Ll~~-g~~~~~~-~~g~t~L~~A~~~~~----~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 276 (384)
++++|++. |++++.. ..|.||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..|+.+++++|++..
T Consensus 163 ~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 242 (285)
T 1wdy_A 163 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 242 (285)
T ss_dssp HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSS
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcc
Confidence 99999998 9999887 789999999999999 99999999999999999999999999999999999999999955
Q ss_pred CCCCCCCCCchhhHHHHHHhhhchhHHHHHhhhhcCCCCCC
Q 016683 277 SEDPSIPKWTVDGILEYMQSESGKQLEETRNLKENNAPKDK 317 (384)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (384)
..+....+..+.+.+ ..+......+..+.+.+.++..+.
T Consensus 243 g~~~~~~~~~g~t~l--~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 243 HIEINDTDSDGKTAL--LLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp SCCTTCCCTTSCCHH--HHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred CCCccccCCCCCcHH--HHHHHcCcHHHHHHHHHcCCCCCc
Confidence 555555554444444 445556678888999998887654
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.7e-43 Score=302.59 Aligned_cols=224 Identities=30% Similarity=0.368 Sum_probs=213.8
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 016683 53 DANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAG 132 (384)
Q Consensus 53 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 132 (384)
+..+.+|||.|+..|+.+++++|++..+..++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH
Confidence 45688999999999999999999998666788899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 016683 133 IGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAG 211 (384)
Q Consensus 133 ~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g 211 (384)
.|+.+++++|+++|++++..+..+ ||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|
T Consensus 83 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 162 (231)
T 3aji_A 83 AGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYK 162 (231)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999999999998877655 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCC
Q 016683 212 ANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLT 276 (384)
Q Consensus 212 ~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 276 (384)
++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|+..++.+++++|.+++
T Consensus 163 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 163 ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 999987 78999999999999999999999999999999999999999999999999999998654
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.1e-42 Score=309.84 Aligned_cols=246 Identities=26% Similarity=0.269 Sum_probs=184.5
Q ss_pred hhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCC---CcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Q 016683 49 ADIKDANKRGALHFAAREGKTDVCKYLLEELKLD---VDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGAT 125 (384)
Q Consensus 49 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t 125 (384)
++.+|.+|.||||+|+..|+.+++++|++. |.+ ++.++..|.||||+|+..|+.++|++|+++|++++..+..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGF-SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 356789999999999999999999999998 777 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCC--------------CCCCHhHHHHHcCCH-HHHHHHHhCCCCCCCCCCCCCC
Q 016683 126 ALHHSAGIGNIELLTYLLSKGAEVDSES--------------DAGTPLIWAAGHGQQ-EAVKVLLEHHANPNAETEDNIT 190 (384)
Q Consensus 126 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~--------------~~~~~l~~A~~~~~~-~~~~~Ll~~~~~~~~~~~~g~t 190 (384)
|||+|+..|+.+++++|++++++..... ...++++.++..+.. .....+...+.+++..+..|.|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 9999999999999999999987643221 112445554444332 3334445566777888888888
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccC--CCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 016683 191 PLLSAVAAGSLTCLDLLIQAGANANIVA--GGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREA 268 (384)
Q Consensus 191 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 268 (384)
|||+|+..|+.+++++|+++|++++... .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.++
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~ 240 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPIL 240 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHH
Confidence 8888888888888888888888888762 38888888888888888888888888888888888888888888888888
Q ss_pred HHhhcCCCCCCCCCCCCchhhHHHHHHh
Q 016683 269 VEILFPLTSEDPSIPKWTVDGILEYMQS 296 (384)
Q Consensus 269 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 296 (384)
+++|++++.... ..+..+.+.+.+...
T Consensus 241 v~~Ll~~ga~~~-~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 241 ARLLRAHGAPEP-EDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHHHTTCCCC-CCC------------
T ss_pred HHHHHHcCCCcC-cCCCcccccccccCC
Confidence 888888776533 333334444444433
No 15
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=6.1e-42 Score=314.43 Aligned_cols=270 Identities=23% Similarity=0.270 Sum_probs=233.7
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 016683 50 DIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHH 129 (384)
Q Consensus 50 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 129 (384)
...+..+.|+||.|+..|+.+.++.|+...+.+++..|..|.||||+|+..|+.++|++|+++|++++..|..|.||||+
T Consensus 18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 18 VLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred eeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 44566788999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH-------------
Q 016683 130 SAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSA------------- 195 (384)
Q Consensus 130 A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A------------- 195 (384)
|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++..+..|.+|++.+
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~ 177 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF 177 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhh
Confidence 999999999999999999998877655 999999999999999999999999999999999998765
Q ss_pred --------HHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhh---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q 016683 196 --------VAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADI---GSTEIIKCLLKAGADPNVTDEDGQKPIQVAAAR 263 (384)
Q Consensus 196 --------~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~---~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 263 (384)
+..++.+.++.++..+...... ..|.||||+|+.. +..+++++|++.|++++.+|..|.||||+|+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 257 (351)
T 3utm_A 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAER 257 (351)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHc
Confidence 4556666777666665433323 7799999999999 568999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCCCCchhhHHHHHHhhhchhHHHHHhhhhcCCCCCCCCCCC
Q 016683 264 GNREAVEILFPLTSEDPSIPKWTVDGILEYMQSESGKQLEETRNLKENNAPKDKAPMKE 322 (384)
Q Consensus 264 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (384)
|+.+++++|++.+..... .+. .+.+++..+......+.++.+.+.++.........
T Consensus 258 g~~~~v~~Ll~~ga~~n~-~d~--~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g 313 (351)
T 3utm_A 258 AHNDVMEVLHKHGAKMNA-LDS--LGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQG 313 (351)
T ss_dssp TCHHHHHHHHHTTCCTTC-CCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCHHHHHHHHHCCCCCCC-cCC--CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCC
Confidence 999999999998754332 333 33444555566778889999999988776555443
No 16
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.9e-43 Score=325.41 Aligned_cols=225 Identities=26% Similarity=0.366 Sum_probs=209.0
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 016683 50 DIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHH 129 (384)
Q Consensus 50 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 129 (384)
+..|..|.||||+||..|+.++|++|++. |++++..|..|.||||+|+..|+.++|++|+++|++++. ..|.||||+
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~ 90 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIET-GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHL 90 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHH
Confidence 45688899999999999999999999998 999999999999999999999999999999999996654 579999999
Q ss_pred HHHcCCHHHHHHHHhC----CCCCCC-----------------CC-CCCCHhHHHHHcC--CHHHHHHHHhCCCCCCCCC
Q 016683 130 SAGIGNIELLTYLLSK----GAEVDS-----------------ES-DAGTPLIWAAGHG--QQEAVKVLLEHHANPNAET 185 (384)
Q Consensus 130 A~~~~~~~~~~~Ll~~----~~~~~~-----------------~~-~~~~~l~~A~~~~--~~~~~~~Ll~~~~~~~~~~ 185 (384)
|+..|+.+++++|++. |.+++. .+ .+.||||+|+..| +.+++++|++.|++++..+
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d 170 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence 9999999999999998 666543 33 3459999999999 9999999999999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC-----cccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 016683 186 EDNITPLLSAVAAGSLTCLDLLIQAGAN-----ANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQV 259 (384)
Q Consensus 186 ~~g~t~l~~A~~~~~~~~v~~Ll~~g~~-----~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 259 (384)
..|.||||+|+..|+.+++++|+++|++ ++.. ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 250 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYL 250 (364)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 9999999999999999999999999998 7776 789999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHhhcCCCC
Q 016683 260 AAARGNREAVEILFPLTS 277 (384)
Q Consensus 260 A~~~~~~~~v~~Ll~~~~ 277 (384)
|+..|+.+++++|++.+.
T Consensus 251 A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 251 SVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp HHHTCCHHHHHHHHHHSC
T ss_pred HHHhChHHHHHHHHHcCC
Confidence 999999999999998764
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=304.25 Aligned_cols=247 Identities=24% Similarity=0.304 Sum_probs=223.5
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcH
Q 016683 14 RVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETP 93 (384)
Q Consensus 14 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 93 (384)
+.++||.||..|+.+++++|++. |.++ +.+|..|.||||+|+..|+.+++++|++. |++++..|..|.||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~----g~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~ 72 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQ----GWAV-----NIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTP 72 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT----TCCS-----SCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC----CCCC-----CCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCH
Confidence 45789999999999999999987 4433 56788999999999999999999999998 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHH
Q 016683 94 LLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVK 172 (384)
Q Consensus 94 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~ 172 (384)
||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.++++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (261)
T 2xai_A 73 LFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVK 151 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHH
Confidence 99999999999999999999999864 459999999999999999999999999998877666 9999999999999999
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCC-----
Q 016683 173 VLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADP----- 246 (384)
Q Consensus 173 ~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~----- 246 (384)
+|++.|++++. +..|.||||+|+..++.+++++|+++|++++.. ..|+||||+|+..+ +++++|++++..+
T Consensus 152 ~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~ 228 (261)
T 2xai_A 152 KLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQL 228 (261)
T ss_dssp HHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHH
T ss_pred HHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHH
Confidence 99999999995 889999999999999999999999999999988 88999999999665 4899999987754
Q ss_pred ---CCCCCCCCcHHHHHHHcCCHHHHHhhcC
Q 016683 247 ---NVTDEDGQKPIQVAAARGNREAVEILFP 274 (384)
Q Consensus 247 ---~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 274 (384)
+.+|..|.||+|.|.+....+.++.++.
T Consensus 229 ~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 229 CRLRIRKCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp HHHHHHTTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred HHHHHHHHhchhccccCcccCCcHHHHHHHh
Confidence 4778999999999999888777765543
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-43 Score=308.89 Aligned_cols=220 Identities=27% Similarity=0.369 Sum_probs=177.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHhCCCC--------CcCCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCCCCCCCC
Q 016683 51 IKDANKRGALHFAAREGKTDVCKYLLEELKLD--------VDTQDEDGETPLLHAARQGHT-ETAKYLFEHGANPTIPSN 121 (384)
Q Consensus 51 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--------~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~ 121 (384)
.+|..+.++|+.||..|+.++|++|++. +.+ ++..+..|.|||+.|+..++. .++++|++.|++++..|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~-~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEW-TEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTC-C----------------------------------------CCCCTTCCCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHC-CCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC
Confidence 3567788999999999999999999987 543 456778899999999988875 589999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC
Q 016683 122 LGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGS 200 (384)
Q Consensus 122 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~ 200 (384)
.|.||||+|+..|+.+++++|++.|++++..+..+ ||+++|+..++.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 99999999999999999999999999998877666 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhc
Q 016683 201 LTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILF 273 (384)
Q Consensus 201 ~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 273 (384)
.+++++|+++|++++.. ..|+||||+|+..|+.++|++|+++|+|++.+|..|+||||+|+++++ ++++|.
T Consensus 165 ~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~--i~~lL~ 236 (269)
T 4b93_B 165 HELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK--IMELLQ 236 (269)
T ss_dssp GGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH--HHHHTT
T ss_pred HHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc--HHHHHH
Confidence 99999999999999987 889999999999999999999999999999999999999999998775 445443
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.2e-43 Score=322.76 Aligned_cols=261 Identities=22% Similarity=0.260 Sum_probs=230.5
Q ss_pred CCchhhhhhhHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCC
Q 016683 3 PDASHALAVRERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLD 82 (384)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 82 (384)
|.........++.++||.||..|++++|++|++. |.++ +.+|..|.||||+|+..|+.+++++|++. |++
T Consensus 9 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~----g~~~-----~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~ 78 (364)
T 3ljn_A 9 PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIET----GVSP-----TIQNRFGCTALHLACKFGCVDTAKYLASV-GEV 78 (364)
T ss_dssp -------CCHHHHHHHHHHHHHTCHHHHHHHHHT----TCCT-----TCCCTTCCCHHHHHHHHCCHHHHHHHHHH-CCC
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc----CCCc-----cccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCC
Confidence 4445555667889999999999999999999987 4443 66788999999999999999999999998 875
Q ss_pred CcCCCCCCCcHHHHHHHcCCHHHHHHHHHC----CCCCCC-----------------CCCCCCcHHHHHHHcC--CHHHH
Q 016683 83 VDTQDEDGETPLLHAARQGHTETAKYLFEH----GANPTI-----------------PSNLGATALHHSAGIG--NIELL 139 (384)
Q Consensus 83 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----g~~~~~-----------------~~~~g~t~L~~A~~~~--~~~~~ 139 (384)
++. ..|.||||+|+..|+.++|++|+++ |++++. .+..|.||||+|+..| +.+++
T Consensus 79 ~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v 156 (364)
T 3ljn_A 79 HSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMI 156 (364)
T ss_dssp CCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHH
T ss_pred ccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHH
Confidence 543 5799999999999999999999998 887776 8889999999999999 99999
Q ss_pred HHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 016683 140 TYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHAN-----PNAETEDNITPLLSAVAAGSLTCLDLLIQAGAN 213 (384)
Q Consensus 140 ~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~-----~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~ 213 (384)
++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 157 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad 236 (364)
T 3ljn_A 157 KILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID 236 (364)
T ss_dssp HHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC
T ss_pred HHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999877655 999999999999999999999998 999999999999999999999999999999999
Q ss_pred cccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCC------------CCCCCCCcHHHHHHHcCCHHHHHhhcCC
Q 016683 214 ANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPN------------VTDEDGQKPIQVAAARGNREAVEILFPL 275 (384)
Q Consensus 214 ~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~------------~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 275 (384)
++.. ..|.||||+|+..|+.+++++|+++|++++ ..+..++||++.|+..|+.+.+..|+..
T Consensus 237 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~ 311 (364)
T 3ljn_A 237 VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQE 311 (364)
T ss_dssp TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHH
Confidence 9987 789999999999999999999999987642 2456789999999999987777777643
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.4e-41 Score=292.41 Aligned_cols=223 Identities=29% Similarity=0.355 Sum_probs=210.3
Q ss_pred HHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHH
Q 016683 15 VQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPL 94 (384)
Q Consensus 15 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 94 (384)
.++|+.|++.|+++.++++++. .+...+..|..|.||||+|+..|+.+++++|++. |++++..+..|.|||
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~--------~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L 77 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILA--------DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQL-GVPVNDKDDAGWSPL 77 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHH--------CGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHH
T ss_pred cchHHHHHHhCCHHHHHHHHHh--------chhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHh-CCCCCCcCCCCCCHH
Confidence 3579999999999999999987 3334567789999999999999999999999998 999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHH
Q 016683 95 LHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKV 173 (384)
Q Consensus 95 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~ 173 (384)
|+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 157 (231)
T 3aji_A 78 HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998877655 99999999999999999
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCC
Q 016683 174 LLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADP 246 (384)
Q Consensus 174 Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 246 (384)
|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..++.+++++|+++|+++
T Consensus 158 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 158 LLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEASM 231 (231)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccccC
Confidence 99999999999999999999999999999999999999999977 78999999999999999999999988763
No 21
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.9e-41 Score=290.41 Aligned_cols=227 Identities=24% Similarity=0.309 Sum_probs=211.9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHH
Q 016683 51 IKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPS-NLGATALHH 129 (384)
Q Consensus 51 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~ 129 (384)
..|..|.|+||.|+..|+.+++++|++. |++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEA-GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 3477899999999999999999999998 99999999999999999999999999999999999988655 459999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHH
Q 016683 130 SAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGS-LTCLDLL 207 (384)
Q Consensus 130 A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~-~~~v~~L 207 (384)
|+..|+.+++++|++.|++++..+..+ ||||+|+..|+.+++++|+++|++++..+..|.||||.|+..++ .+++++|
T Consensus 83 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L 162 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLL 162 (240)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHH
Confidence 999999999999999999998776655 99999999999999999999999999999999999999997665 8999999
Q ss_pred HHcCCCcccc-C-CCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCC
Q 016683 208 IQAGANANIV-A-GGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSE 278 (384)
Q Consensus 208 l~~g~~~~~~-~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 278 (384)
++.|++++.. . .|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++.+..
T Consensus 163 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 163 LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 9999999977 3 799999999999999999999999999999999999999999999999999999987654
No 22
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7.4e-40 Score=299.37 Aligned_cols=251 Identities=27% Similarity=0.369 Sum_probs=227.9
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcH
Q 016683 14 RVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETP 93 (384)
Q Consensus 14 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 93 (384)
+.++||.||..|+.++|+.|++. |..+ +.++..+.++++.++..+...++..++.. +.+++..|..|.||
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~----ga~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~g~t~ 128 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRH----GADP-----VLRKKNGATPFILAAIAGSVKLLKLFLSK-GADVNECDFYGFTA 128 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHT----TCCT-----TCCCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCBCTTCCBH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHc----CCch-----hhhccCCCchhHHHHhcccchhhHHhhhc-cchhhhhccCCCCH
Confidence 46799999999999999999997 5443 56788999999999999999999999987 99999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCC-CHhHH
Q 016683 94 LLHAARQGHTETAKYLFEHGANPTIP----------SNLGATALHHSAGIGNIELLTYLLS-KGAEVDSESDAG-TPLIW 161 (384)
Q Consensus 94 L~~A~~~g~~~~v~~Ll~~g~~~~~~----------~~~g~t~L~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~~-~~l~~ 161 (384)
||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++ .|++++..+..+ |+++.
T Consensus 129 l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~ 208 (337)
T 4g8k_A 129 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 208 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHH
Confidence 99999999999999999999988654 4568999999999999999999995 699998877655 99988
Q ss_pred HHHcCC----HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccc-CCCchHHHHHHhhCCHHH
Q 016683 162 AAGHGQ----QEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQA-GANANIV-AGGATPLHIAADIGSTEI 235 (384)
Q Consensus 162 A~~~~~----~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~-g~~~~~~-~~g~t~L~~A~~~~~~~~ 235 (384)
++..+. ..++++|+++|++++.++..|.||||+|+..|+.+++++|++. |++++.. ..|+||||+|+..|+.++
T Consensus 209 ~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~i 288 (337)
T 4g8k_A 209 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKI 288 (337)
T ss_dssp HHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHH
Confidence 776543 4688999999999999999999999999999999999999985 7899887 789999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCC
Q 016683 236 IKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSED 279 (384)
Q Consensus 236 v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 279 (384)
|++|+++|++++.+ +|||+|+.+|+.++|++|+++++..
T Consensus 289 v~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~ 327 (337)
T 4g8k_A 289 AELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKE 327 (337)
T ss_dssp HHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC
T ss_pred HHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCC
Confidence 99999999999864 6999999999999999999998754
No 23
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.8e-41 Score=287.89 Aligned_cols=215 Identities=27% Similarity=0.352 Sum_probs=196.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCC-cCCCCCCCcHHHHHHHcCCHHHHHHHHHCC--CCCCC-CCCCCCcHHHHHH
Q 016683 56 KRGALHFAAREGKTDVCKYLLEELKLDV-DTQDEDGETPLLHAARQGHTETAKYLFEHG--ANPTI-PSNLGATALHHSA 131 (384)
Q Consensus 56 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~-~~~~g~t~L~~A~ 131 (384)
|+||||+|+..|+.+++++|++. +.++ +..+..|.||||+|+..|+.+++++|+++| ++++. .+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHS-KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHH-CGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhc-CccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 78999999999999999999998 5554 458999999999999999999999999999 55555 7889999999999
Q ss_pred HcCCHHHHHHHHhCC--CCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 016683 132 GIGNIELLTYLLSKG--AEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLI 208 (384)
Q Consensus 132 ~~~~~~~~~~Ll~~~--~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 208 (384)
..|+.+++++|+++| .+++..+..+ ||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999998 7777666544 9999999999999999999999999999999999999999999999999999
Q ss_pred HcC-CCcccc-CCCchHHHHHHhhCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcC
Q 016683 209 QAG-ANANIV-AGGATPLHIAADIGSTEIIKCLL-KAGADPNVTDEDGQKPIQVAAARGNREAVEILFP 274 (384)
Q Consensus 209 ~~g-~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 274 (384)
+.| ++++.. ..|+||||+|+..|+.+++++|+ ++|++++.+|..|+||+++|+.. +++++|++
T Consensus 161 ~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 161 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp TTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred hcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 999 898877 78999999999999999999999 89999999999999999999765 56666654
No 24
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=295.93 Aligned_cols=252 Identities=22% Similarity=0.277 Sum_probs=196.8
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhC----------CCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Q 016683 53 DANKRGALHFAAREGKTDVCKYLLEEL----------KLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNL 122 (384)
Q Consensus 53 d~~g~t~L~~A~~~g~~~~v~~Ll~~~----------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 122 (384)
...|.|+||+|+..|+.+.+..++... ...++..+..|+||||+|+..|+.++|++|++.|++++..|..
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~ 91 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD 91 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTT
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 457999999999999987777665431 2235678899999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH
Q 016683 123 GATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSL 201 (384)
Q Consensus 123 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~ 201 (384)
|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|++.|++++..+ .|.||||+|+..|+.
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~ 170 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHV 170 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCH
Confidence 9999999999999999999999999998877655 99999999999999999999999988654 599999999999999
Q ss_pred HHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCCC
Q 016683 202 TCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSEDP 280 (384)
Q Consensus 202 ~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 280 (384)
+++++|++.|++++.. ..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++++.. .
T Consensus 171 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~ 248 (285)
T 3d9h_A 171 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGAD-T 248 (285)
T ss_dssp HHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-C
Confidence 9999999999999877 7899999999999999999999999999995 88999999999999999999999998654 3
Q ss_pred CCCCCchhhHHHHHHhhhchhHHHHHhhhhc
Q 016683 281 SIPKWTVDGILEYMQSESGKQLEETRNLKEN 311 (384)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (384)
...+..+.+.+.++. +..+..+.+++.
T Consensus 249 ~~~d~~g~t~l~~A~----~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 249 QAKNAEGKRPVELVP----PESPLAQLFLER 275 (285)
T ss_dssp TCCCTTSCCGGGGSC----TTSHHHHHHHHH
T ss_pred CCcCCCCCCHHHHhc----CccHHHHHHHHh
Confidence 444444555544433 123444445444
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.8e-40 Score=291.08 Aligned_cols=224 Identities=28% Similarity=0.365 Sum_probs=183.3
Q ss_pred hhHHHHHHHHHHHcC-------------ChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHH
Q 016683 11 VRERVQQFLNAACTG-------------NLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLE 77 (384)
Q Consensus 11 ~~~~~~~l~~A~~~g-------------~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 77 (384)
...+.++||.|+..| +.+++++|++. |.. +....|..|.||||+|+..|+.+++++|++
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~----g~~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 78 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ----GAS----LHNQTDRTGETALHLAARYSRSDAAKRLLE 78 (253)
T ss_dssp -----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc----cCC----cccccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 356789999999987 99999999987 322 234568899999999999999999999999
Q ss_pred hCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 016683 78 ELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGA-NPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG 156 (384)
Q Consensus 78 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~ 156 (384)
. |++++..+..|.||||+|+..|+.+++++|++++. +++..+..|.||||+|+..|+.+++++|++.|++++..+..+
T Consensus 79 ~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g 157 (253)
T 1yyh_A 79 A-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157 (253)
T ss_dssp T-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTS
T ss_pred c-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCC
Confidence 8 99999999999999999999999999999999987 899999999999999999999999999999999999877655
Q ss_pred -CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHH
Q 016683 157 -TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTE 234 (384)
Q Consensus 157 -~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~ 234 (384)
||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+
T Consensus 158 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999987 78999999999999999
Q ss_pred HHHHHHHCC
Q 016683 235 IIKCLLKAG 243 (384)
Q Consensus 235 ~v~~Ll~~g 243 (384)
++++|....
T Consensus 238 i~~~l~~~~ 246 (253)
T 1yyh_A 238 IVRLLDLEH 246 (253)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHHh
Confidence 999998753
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-41 Score=302.80 Aligned_cols=244 Identities=29% Similarity=0.338 Sum_probs=210.9
Q ss_pred HHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHH
Q 016683 20 NAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAAR 99 (384)
Q Consensus 20 ~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 99 (384)
.++..+..+.++.++....+.............+..|.||||.||..|+.+++++|++. |++++..|..|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHH
Confidence 46777888888888876443222222222333456789999999999999999999998 99999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhC-
Q 016683 100 QGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEH- 177 (384)
Q Consensus 100 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~- 177 (384)
.|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..++.+++++++..
T Consensus 83 ~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~ 162 (299)
T 1s70_B 83 DDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999998877655 999999999999999877652
Q ss_pred CCC--------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhh
Q 016683 178 HAN--------------------------PNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADI 230 (384)
Q Consensus 178 ~~~--------------------------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~ 230 (384)
+.+ ....+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~ 242 (299)
T 1s70_B 163 GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHW 242 (299)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhc
Confidence 332 2335667999999999999999999999999999887 7899999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 016683 231 GSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARG 264 (384)
Q Consensus 231 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 264 (384)
|+.+++++|+++|++++.+|..|.||+|+|++..
T Consensus 243 ~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 276 (299)
T 1s70_B 243 GKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGG
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999996543
No 27
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-41 Score=314.06 Aligned_cols=296 Identities=18% Similarity=0.207 Sum_probs=220.3
Q ss_pred hHHHHHHHHHHHcCChHHHHHHHHHhhhcCCC---------------ccchhhhcccCCCCcHHHHHHHcCCHHHHHHHH
Q 016683 12 RERVQQFLNAACTGNLDLLKKIAKQLDDQGKG---------------LSKTVADIKDANKRGALHFAAREGKTDVCKYLL 76 (384)
Q Consensus 12 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~---------------~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 76 (384)
.....+|+.++..|+.+.++.+++...+.... +...+....+..|.||||+|+..|. +++++|+
T Consensus 35 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~t~L~~Aa~~~~-~~~~~L~ 113 (373)
T 2fo1_E 35 TSSQHSLLEASYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSY-AITEPIT 113 (373)
T ss_dssp -----------------------------------------------------------CCCHHHHHHHSSS-CCCSCCS
T ss_pred cccccccccccCCccccchhhhhhhhccccCccccCCCCCccccccccccccccCCCCCCccHHHHHhcCCc-hHHHHhc
Confidence 34556788899889988888877654432100 1112345678899999999999654 7888775
Q ss_pred HhCCCCCcCCC-CCCCcHHHHHHHcCCHHHHHHHH--------HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 016683 77 EELKLDVDTQD-EDGETPLLHAARQGHTETAKYLF--------EHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGA 147 (384)
Q Consensus 77 ~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll--------~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 147 (384)
+.+++..| ..|.||||+|+..|+.+++++|+ +.|++++..|..|.||||+|+..|+.+++++|+++|+
T Consensus 114 ---~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 190 (373)
T 2fo1_E 114 ---RESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGA 190 (373)
T ss_dssp ---TTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ---cccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCC
Confidence 45778888 78999999999999998888776 8999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCC---CCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHcCCCcccc---
Q 016683 148 EVDSESDAG-TPLIWAAGHGQQEAVKVLLEHH---ANPNAETEDNITPLLSAVAAG---SLTCLDLLIQAGANANIV--- 217 (384)
Q Consensus 148 ~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~---~~~~~~~~~g~t~l~~A~~~~---~~~~v~~Ll~~g~~~~~~--- 217 (384)
+++..+..+ ||||+|+..|+.+++++|++.+ ++++..+..|.||||+|+..+ +.+++++|+++|++++..
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 270 (373)
T 2fo1_E 191 DPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 270 (373)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG
T ss_pred CCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc
Confidence 998877655 9999999999999999999998 799999999999999999998 899999999999998852
Q ss_pred ------CCCchHHHHHHhhCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCCCCCCCCchhhH
Q 016683 218 ------AGGATPLHIAADIGSTEIIKCLLKAG-ADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSEDPSIPKWTVDGI 290 (384)
Q Consensus 218 ------~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 290 (384)
..|.||||+|+..|+.++|++|++.| ++++.+|..|.||||+|+..|+.+++++|++++..... .+..+.+
T Consensus 271 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~-~d~~g~t- 348 (373)
T 2fo1_E 271 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA-VDATDHT- 348 (373)
T ss_dssp GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCSSSCC-
T ss_pred ccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccC-CCCCCCC-
Confidence 47999999999999999999999876 99999999999999999999999999999998765333 3333334
Q ss_pred HHHHHhhhchhHHHHHhhhhcCCC
Q 016683 291 LEYMQSESGKQLEETRNLKENNAP 314 (384)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~~~~~ 314 (384)
.+..+......+.++.+.+.++.
T Consensus 349 -~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 349 -ARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp -HHHHHHHTTCHHHHHHHHTTC--
T ss_pred -HHHHHHHcCCHHHHHHHHhcCcc
Confidence 44445556777778888777654
No 28
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=9.3e-41 Score=290.42 Aligned_cols=227 Identities=25% Similarity=0.338 Sum_probs=206.8
Q ss_pred hHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCC
Q 016683 12 RERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGE 91 (384)
Q Consensus 12 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 91 (384)
+.+.++||.||..|+.+++++|++.+.+.+..+ +.+|..|.||||+|+..|+.+++++|++. |++++..+..|.
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~ 80 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-----DIYNNLRQTPLHLAVITTLPSVVRLLVTA-GASPMALDRHGQ 80 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-----CCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----CcccccCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCC
Confidence 345678999999999999999999766545544 56788999999999999999999999997 999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-C-CCCHhHHHHHc
Q 016683 92 TPLLHAARQGHTETAKYLFEHGA----NPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSES-D-AGTPLIWAAGH 165 (384)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~-~-~~~~l~~A~~~ 165 (384)
||||+|+..|+.+++++|++.++ +++..+..|.||||+|+..|+.+++++|++.|++++..+ . +.||||+|+..
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHc
Confidence 99999999999999999999987 888999999999999999999999999999999998776 3 44999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCC
Q 016683 166 GQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGA 244 (384)
Q Consensus 166 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga 244 (384)
|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.++++.|.+.++
T Consensus 161 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 161 NSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 9999999999999999999999999999999999999999999999999987 789999999999999999999998764
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.6e-40 Score=284.34 Aligned_cols=211 Identities=29% Similarity=0.382 Sum_probs=192.5
Q ss_pred CCHHHHHHHHHhCCCCCcCC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 016683 67 GKTDVCKYLLEELKLDVDTQ-DEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSK 145 (384)
Q Consensus 67 g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 145 (384)
|+.+++++|++. |.+++.. |..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++.
T Consensus 2 g~~~~i~~Ll~~-g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEET-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHc-CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 678888899987 8888765 78999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCch
Q 016683 146 GA-EVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGAT 222 (384)
Q Consensus 146 ~~-~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t 222 (384)
+. +++..+..+ ||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|.|
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 160 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET 160 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcC
Confidence 86 666655444 9999999999999999999999999999999999999999999999999999999999887 78999
Q ss_pred HHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCC
Q 016683 223 PLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSE 278 (384)
Q Consensus 223 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 278 (384)
|||+|+..|+.+++++|+++|++++.+|..|.||+++|+.+++.+++++|++++..
T Consensus 161 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 161 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999988764
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=297.67 Aligned_cols=233 Identities=24% Similarity=0.359 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHH-HHHHHHHhCCCCCcCCCCCCC
Q 016683 13 ERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTD-VCKYLLEELKLDVDTQDEDGE 91 (384)
Q Consensus 13 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~~g~ 91 (384)
...++|+.||..|++++|++|++...+.... .....+..+..|.||||.|+..++.+ ++++|++. |+++|.+|.+|+
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~-~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~-Gadvn~~d~~G~ 87 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLED-AEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPAS-GLGVNVTSQDGS 87 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------C-CCCTTCCCTTSC
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCccccc-ccccccccCccCCCHHHHHHHhCCHHHHHHHHHHC-CCCCCCcCCCCC
Confidence 4568999999999999999999874321111 12224567888999999999988765 78888887 999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHH
Q 016683 92 TPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEA 170 (384)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~ 170 (384)
||||+|+..|+.++|++|++.|++++..+..|.||+++|+..++.+++++|++.|++++..+..+ ||||+|+..|+.++
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~ 167 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHEL 167 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGG
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877665 99999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCC-HHHHHHHHHCCCCCC
Q 016683 171 VKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGS-TEIIKCLLKAGADPN 247 (384)
Q Consensus 171 ~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~-~~~v~~Ll~~ga~~~ 247 (384)
+++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|+||||+|+++++ .+++++|...++.++
T Consensus 168 v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 168 VALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD 246 (269)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred HHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence 99999999999999999999999999999999999999999999988 889999999998876 455666666555443
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.8e-41 Score=299.26 Aligned_cols=237 Identities=17% Similarity=0.142 Sum_probs=210.9
Q ss_pred HHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHc
Q 016683 21 AACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQ 100 (384)
Q Consensus 21 A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 100 (384)
+++..+...+..++... ..+.+|..|.||||+|+..|+.+++++|++. |++++.. +|.||||+|+..
T Consensus 6 ~i~~~~~~~v~~lL~~~----------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~--~g~t~L~~A~~~ 72 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSK----------DTFKADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLL--ENEFPLHQAATL 72 (285)
T ss_dssp TGGGCCHHHHHHHHHST----------TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCC--TTCCHHHHHTTS
T ss_pred HHHhcCHHHHHHHHHhC----------CCCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC--CCCCHHHHHHHc
Confidence 45667777777777641 1367889999999999999999999999998 9999888 489999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC--CHhHHHHHcCCHHHHHHHHhCC
Q 016683 101 GHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG--TPLIWAAGHGQQEAVKVLLEHH 178 (384)
Q Consensus 101 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~--~~l~~A~~~~~~~~~~~Ll~~~ 178 (384)
|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|
T Consensus 73 g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g 152 (285)
T 3kea_A 73 EDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI 152 (285)
T ss_dssp SSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999998776654 9999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchH-HHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcH
Q 016683 179 ANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATP-LHIAADIGSTEIIKCLLKAGADPNVTDEDGQKP 256 (384)
Q Consensus 179 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~-L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 256 (384)
++.... ..|.||||+|+..|+.+++++|+++|++++.. ..|+|| ||+|+..|+.+++++|+++|++++..|.
T Consensus 153 ~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~----- 226 (285)
T 3kea_A 153 PSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL----- 226 (285)
T ss_dssp CTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-----
T ss_pred Cccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-----
Confidence 877333 27899999999999999999999999999987 678897 9999999999999999999999999883
Q ss_pred HHHHHHcCCHHHHHhhcCCCCC
Q 016683 257 IQVAAARGNREAVEILFPLTSE 278 (384)
Q Consensus 257 l~~A~~~~~~~~v~~Ll~~~~~ 278 (384)
.|+..|+.+++++|++++..
T Consensus 227 --~a~~~~~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 227 --ENVLLDDAEIAKMIIEKHVE 246 (285)
T ss_dssp --GGGTTTCHHHHHHHHHHHHH
T ss_pred --hhhhcCCHHHHHHHHHcCCC
Confidence 56779999999999987643
No 32
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.7e-39 Score=277.10 Aligned_cols=214 Identities=28% Similarity=0.349 Sum_probs=196.0
Q ss_pred CChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHH
Q 016683 25 GNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTE 104 (384)
Q Consensus 25 g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 104 (384)
|+.+++++|++. |.++ ....|..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..|+.+
T Consensus 2 g~~~~i~~Ll~~----g~~~----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~ 72 (223)
T 2f8y_A 2 DAPAVISDFIYQ----GASL----HNQTDRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQG 72 (223)
T ss_dssp ---CCEETTEET----TCCT----TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CcHHHHHHHHHc----CCCc----ccccCCCCCchHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 567777777765 3332 244588999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHHCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCC
Q 016683 105 TAKYLFEHGA-NPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPN 182 (384)
Q Consensus 105 ~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~ 182 (384)
++++|++++. +++..+..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++
T Consensus 73 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 152 (223)
T 2f8y_A 73 VFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD 152 (223)
T ss_dssp HHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999987 889999999999999999999999999999999998877655 99999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCC
Q 016683 183 AETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPN 247 (384)
Q Consensus 183 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 247 (384)
..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..++.+++++|+++|+...
T Consensus 153 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 153 MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999987 789999999999999999999999998654
No 33
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.2e-38 Score=276.53 Aligned_cols=219 Identities=25% Similarity=0.376 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCc
Q 016683 13 ERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGET 92 (384)
Q Consensus 13 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 92 (384)
.+.++||.||..|+.+++++|++. |.++ +..+..|.||||+|+..|+.+++++|++. |++++..+..|.|
T Consensus 10 ~g~t~L~~A~~~g~~~~v~~Ll~~----g~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t 79 (237)
T 3b7b_A 10 NKRSPLHAAAEAGHVDICHMLVQA----GANI-----DTCSEDQRTPLMEAAENNHLEAVKYLIKA-GALVDPKDAEGST 79 (237)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHHT----TCCT-----TCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCCCCCCTTSCC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHc----CCCc-----CccCCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCc
Confidence 455789999999999999999987 4433 56678899999999999999999999987 9999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHH
Q 016683 93 PLLHAARQGHTETAKYLFEHG-ANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEA 170 (384)
Q Consensus 93 ~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~ 170 (384)
|||+|+..|+.+++++|+++| .+++..+..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.++
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999999998 8999999999999999999999999999999999998876655 99999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHH
Q 016683 171 VKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLK 241 (384)
Q Consensus 171 ~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~ 241 (384)
+++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.. ..|.||||+|+..|+.+.+..|++
T Consensus 160 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 160 AEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987 889999999999999876666654
No 34
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.5e-39 Score=284.59 Aligned_cols=237 Identities=22% Similarity=0.260 Sum_probs=183.2
Q ss_pred CcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CH
Q 016683 83 VDTQDEDGETPLLHAARQGHTETAKYLFEHGAN---PTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TP 158 (384)
Q Consensus 83 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~ 158 (384)
++.+|..|+||||+|+..|+.++|++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++..+..+ ||
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 467899999999999999999999999999998 78899999999999999999999999999999998877655 99
Q ss_pred hHHHHHcCCHHHHHHHHhCCCCCCCC-------------CCCCCCHHHHHHHcCCH-HHHHHHHHcCCCcccc-CCCchH
Q 016683 159 LIWAAGHGQQEAVKVLLEHHANPNAE-------------TEDNITPLLSAVAAGSL-TCLDLLIQAGANANIV-AGGATP 223 (384)
Q Consensus 159 l~~A~~~~~~~~~~~Ll~~~~~~~~~-------------~~~g~t~l~~A~~~~~~-~~v~~Ll~~g~~~~~~-~~g~t~ 223 (384)
||+|+..|+.+++++|++.+++.... ...+.++++.++..+.. .....+...+.+++.. ..|.||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 99999999999999999998764322 22345566665554433 3334444556667666 779999
Q ss_pred HHHHHhhCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHhhcCCCCCCCCCCCCchhhHHHHHHhhhchhH
Q 016683 224 LHIAADIGSTEIIKCLLKAGADPNVTDE-DGQKPIQVAAARGNREAVEILFPLTSEDPSIPKWTVDGILEYMQSESGKQL 302 (384)
Q Consensus 224 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (384)
||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++.+.. +...+.. +.+++..+......
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~--g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYG--GRTPLGSALLRPNP 238 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT--SCCHHHHHHTSSCH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CcccccC--CCCHHHHHHHcCCc
Confidence 9999999999999999999999999986 499999999999999999999998654 3333333 34455556667788
Q ss_pred HHHHhhhhcCCCCCCCCCCC
Q 016683 303 EETRNLKENNAPKDKAPMKE 322 (384)
Q Consensus 303 ~~~~~l~~~~~~~~~~~~~~ 322 (384)
+..+.+.+.++.........
T Consensus 239 ~~v~~Ll~~ga~~~~~~~~g 258 (282)
T 1oy3_D 239 ILARLLRAHGAPEPEDGGDK 258 (282)
T ss_dssp HHHHHHHHTTCCCCCCC---
T ss_pred HHHHHHHHcCCCcCcCCCcc
Confidence 89999999998877555443
No 35
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=273.91 Aligned_cols=226 Identities=28% Similarity=0.436 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCC-CCCC
Q 016683 13 ERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQD-EDGE 91 (384)
Q Consensus 13 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~ 91 (384)
.+.++|+.|+..|+++++++|++. |.++ +.++..|.||||+|+..|+.+++++|++. +.+++..+ ..|.
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~----g~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~ 77 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEA----GYDV-----RQPDKENVTLLHWAAINNRIDLVKYYISK-GAIVDQLGGDLNS 77 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHT----TCCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTTB
T ss_pred ccchHHHHHHHcCChHHHHHHHHc----CCCc-----CCCCCCCCCHHHHHHHhCCHHHHHHHHHc-CCcchhhcCCcCC
Confidence 345679999999999999999987 4333 56688899999999999999999999998 88777655 4599
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCC-HH
Q 016683 92 TPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQ-QE 169 (384)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~-~~ 169 (384)
||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..++ .+
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred ChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHH
Confidence 99999999999999999999999999999999999999999999999999999999998877655 99999997666 89
Q ss_pred HHHHHHhCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCC
Q 016683 170 AVKVLLEHHANPNAETE-DNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPN 247 (384)
Q Consensus 170 ~~~~Ll~~~~~~~~~~~-~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 247 (384)
++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|++.|++..
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 99999999999999987 8999999999999999999999999999987 789999999999999999999999987654
Q ss_pred C
Q 016683 248 V 248 (384)
Q Consensus 248 ~ 248 (384)
.
T Consensus 238 ~ 238 (240)
T 3eu9_A 238 Y 238 (240)
T ss_dssp -
T ss_pred c
Confidence 3
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.8e-38 Score=272.49 Aligned_cols=215 Identities=24% Similarity=0.345 Sum_probs=197.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCC--CCCcC-CCCCCC
Q 016683 15 VQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELK--LDVDT-QDEDGE 91 (384)
Q Consensus 15 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~~-~~~~g~ 91 (384)
.++||.||+.|+.+++++|++.. +.....+|..|.||||+|+..|+.+++++|++. | .+++. .+..|.
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~g~ 73 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSK--------PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSK-MENVNLDDYPDDSGW 73 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHC--------GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-CTTCCGGGCCCTTSC
T ss_pred ccHHHHHHHhCCHHHHHHHHhcC--------ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhc-cccccccccCCCCCC
Confidence 35899999999999999999972 233455788999999999999999999999998 7 66666 889999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCH
Q 016683 92 TPLLHAARQGHTETAKYLFEHG--ANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQ 168 (384)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~ 168 (384)
||||+|+..|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 153 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999998 8999999999999999999999999999999999998877655 999999999999
Q ss_pred HHHHHHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHH
Q 016683 169 EAVKVLLEHH-ANPNAETEDNITPLLSAVAAGSLTCLDLLI-QAGANANIV-AGGATPLHIAADIGSTEIIKCLLK 241 (384)
Q Consensus 169 ~~~~~Ll~~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll-~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~ 241 (384)
+++++|++.| ++++..+..|.||||+|+..|+.+++++|+ +.|++++.. ..|.||||+|+.. +++++|++
T Consensus 154 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 154 KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 9999999999 999999999999999999999999999999 999999988 7899999999765 56666765
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.4e-38 Score=283.75 Aligned_cols=237 Identities=19% Similarity=0.187 Sum_probs=204.9
Q ss_pred HcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 016683 65 REGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLS 144 (384)
Q Consensus 65 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 144 (384)
...+...+..++.. + +++.+|..|.||||+|+..|+.++|++|+++|++++..+ |.||||+|+..|+.+++++|++
T Consensus 8 ~~~~~~~v~~lL~~-~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~ 83 (285)
T 3kea_A 8 NTWKSKQLKSFLSS-K-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLF 83 (285)
T ss_dssp GGCCHHHHHHHHHS-T-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHH
T ss_pred HhcCHHHHHHHHHh-C-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHH
Confidence 33444444444444 2 688999999999999999999999999999999999884 8999999999999999999999
Q ss_pred CCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCch
Q 016683 145 KGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDN-ITPLLSAVAAGSLTCLDLLIQAGANANIVAGGAT 222 (384)
Q Consensus 145 ~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g-~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t 222 (384)
+|++++..+..+ ||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|+++|+++.....|.|
T Consensus 84 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t 163 (285)
T 3kea_A 84 SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLS 163 (285)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHH
T ss_pred CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCcc
Confidence 999998877655 99999999999999999999999999999999 7999999999999999999999988754457999
Q ss_pred HHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcH-HHHHHHcCCHHHHHhhcCCCCCCCCCCCCchhhHHHHHHhhhchh
Q 016683 223 PLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKP-IQVAAARGNREAVEILFPLTSEDPSIPKWTVDGILEYMQSESGKQ 301 (384)
Q Consensus 223 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~-l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (384)
|||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|++++......+. .+.....
T Consensus 164 ~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~----------~a~~~~~ 233 (285)
T 3kea_A 164 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL----------ENVLLDD 233 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG----------GGGTTTC
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh----------hhhhcCC
Confidence 9999999999999999999999999999999998 9999999999999999999765433331 1123445
Q ss_pred HHHHHhhhhcCCCC
Q 016683 302 LEETRNLKENNAPK 315 (384)
Q Consensus 302 ~~~~~~l~~~~~~~ 315 (384)
.+.++.+.+.+...
T Consensus 234 ~~iv~~Ll~~g~~~ 247 (285)
T 3kea_A 234 AEIAKMIIEKHVEY 247 (285)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCC
Confidence 66666666665443
No 38
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.5e-37 Score=268.73 Aligned_cols=206 Identities=27% Similarity=0.273 Sum_probs=174.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-----CCCCCCCCcHHHH
Q 016683 55 NKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANP-----TIPSNLGATALHH 129 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----~~~~~~g~t~L~~ 129 (384)
.|.||||+|+..|+.+++++|++..|++++.+|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 48999999999999999999999879999999999999999999999999999999999887 6677889999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 016683 130 SAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQ 209 (384)
Q Consensus 130 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 209 (384)
|+..|+.+++++|+++|++++..+... .+ ....+..+..|.||||+|+..|+.+++++|++
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~-~~------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 142 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGS-VF------------------HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE 142 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSG-GG------------------SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCc-ce------------------eecccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999987755431 11 11344556678888888888888888888888
Q ss_pred cCCCcccc-CCCchHHHHHHhhCCHHHH----HHHHHCCCCC------CCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCC
Q 016683 210 AGANANIV-AGGATPLHIAADIGSTEII----KCLLKAGADP------NVTDEDGQKPIQVAAARGNREAVEILFPLTSE 278 (384)
Q Consensus 210 ~g~~~~~~-~~g~t~L~~A~~~~~~~~v----~~Ll~~ga~~------~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 278 (384)
+|++++.. ..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|+.+++++|++++..
T Consensus 143 ~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 143 HGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp TTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 88888776 6788888888888888877 8888888877 57888888888888888888888888877654
Q ss_pred C
Q 016683 279 D 279 (384)
Q Consensus 279 ~ 279 (384)
.
T Consensus 223 ~ 223 (232)
T 2rfa_A 223 I 223 (232)
T ss_dssp C
T ss_pred c
Confidence 3
No 39
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.1e-39 Score=281.18 Aligned_cols=208 Identities=22% Similarity=0.235 Sum_probs=142.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHhC---CCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 016683 51 IKDANKRGALHFAAREGKTDVCKYLLEEL---KLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATAL 127 (384)
Q Consensus 51 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 127 (384)
.+|.+|.||||+|+..|+.+++++|++.. +.+++..+..|.||||+|+..|+.++|++|+++|++++..|..|.|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 46788999999999999999999999862 237899999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCC------CCCC-CCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHcC
Q 016683 128 HHSAGIGNIELLTYLLSKGAEVD------SESD-AGTPLIWAAGHGQQEAVKVLLEHHANPNAETE-DNITPLLSAVAAG 199 (384)
Q Consensus 128 ~~A~~~~~~~~~~~Ll~~~~~~~------~~~~-~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~A~~~~ 199 (384)
|+|+..|+.+++++|++.+.+.. ..+. +.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 99999999999999999987632 1221 22555555555555555555555555555554 5555555555555
Q ss_pred CHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCC--CCCCCCCcHHH
Q 016683 200 SLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPN--VTDEDGQKPIQ 258 (384)
Q Consensus 200 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~~g~t~l~ 258 (384)
+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|+++. ..+..|.||.+
T Consensus 163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~ 224 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYD 224 (236)
T ss_dssp CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCC
T ss_pred CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHh
Confidence 555555555555555544 445555555555555555555555555433 44444444443
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=8.3e-37 Score=264.06 Aligned_cols=206 Identities=24% Similarity=0.319 Sum_probs=157.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----CCCC-CCCCHhHH
Q 016683 89 DGETPLLHAARQGHTETAKYLFEH-GANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEV-----DSES-DAGTPLIW 161 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~-----~~~~-~~~~~l~~ 161 (384)
.|+||||+|+..|+.++|++|++. |++++..|..|.||||+|+..|+.+++++|++.|+++ +..+ .+.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 588999999999999999999997 9999999999999999999999999999999988765 2222 23366666
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHH
Q 016683 162 AAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLL 240 (384)
Q Consensus 162 A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll 240 (384)
|+..|+.+++++|+++|++++..+.... +. ...+.. ..|.||||+|+..|+.+++++|+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~--~~------------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 141 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSV--FH------------------YRPHNLIYYGEHPLSFAACVGSEEIVRLLI 141 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGG--GS------------------CCTTCSCCCCSSHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcc--ee------------------ecccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 6666666666666666666655443211 10 011111 36999999999999999999999
Q ss_pred HCCCCCCCCCCCCCcHHHHHHHcCCHHHH----HhhcCCCCCCC-----CCCCCchhhHHHHHHhhhchhHHHHHhhhhc
Q 016683 241 KAGADPNVTDEDGQKPIQVAAARGNREAV----EILFPLTSEDP-----SIPKWTVDGILEYMQSESGKQLEETRNLKEN 311 (384)
Q Consensus 241 ~~ga~~~~~~~~g~t~l~~A~~~~~~~~v----~~Ll~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (384)
++|++++.+|..|+||||+|+..|+.+++ ++|++.+.... ...+.. +.+++..+......+..+.+.+.
T Consensus 142 ~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~--g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 142 EHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQ--GLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTT--SCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCC--CCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999999999999999999999988 99999887553 233333 44455555666778888888776
Q ss_pred CCCCC
Q 016683 312 NAPKD 316 (384)
Q Consensus 312 ~~~~~ 316 (384)
+....
T Consensus 220 g~~~~ 224 (232)
T 2rfa_A 220 RKHIA 224 (232)
T ss_dssp HHHC-
T ss_pred Cccch
Confidence 65443
No 41
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=5e-36 Score=253.24 Aligned_cols=191 Identities=27% Similarity=0.413 Sum_probs=145.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q 016683 54 ANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGI 133 (384)
Q Consensus 54 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 133 (384)
..+.||||.|+..|+.++++.|+...+.+++..|..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 45788999999999999999999886668888888999999999999999999999999999988888888888888887
Q ss_pred CCHHHHHHHH-hCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-
Q 016683 134 GNIELLTYLL-SKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAG- 211 (384)
Q Consensus 134 ~~~~~~~~Ll-~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g- 211 (384)
|+.+++++|+ ..+.+ ++..+..|.||||.|+..|+.+++++|+++|
T Consensus 83 ~~~~~~~~Ll~~~~~~--------------------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 130 (201)
T 3hra_A 83 GRTEILAYMLKHATPD--------------------------------LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR 130 (201)
T ss_dssp TCHHHHHHHHHHSCCC--------------------------------TTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC
T ss_pred CCHHHHHHHHhccCcc--------------------------------cccccCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 7777777777 33334 4444555566666666666666666666666
Q ss_pred CCcccc-CCCchHHHHHHhhCC-----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCC
Q 016683 212 ANANIV-AGGATPLHIAADIGS-----TEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLT 276 (384)
Q Consensus 212 ~~~~~~-~~g~t~L~~A~~~~~-----~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 276 (384)
++++.. ..|+||||+|+..++ .+++++|+++|++++.+|..|.||||+|+.+|+.+++++|++++
T Consensus 131 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 131 EDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 555554 456677777776666 77777777777777777777778888887777777777777653
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-36 Score=270.85 Aligned_cols=219 Identities=25% Similarity=0.367 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCc
Q 016683 13 ERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGET 92 (384)
Q Consensus 13 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 92 (384)
...++|+.||..|++++|++|++. |.++ +..|..|.||||+|+..|+.+++++|++. |++++..|..|.|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~----g~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t 108 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLER----GADI-----NYANVDGLTALHQACIDDNVDMVKFLVEN-GANINQPDNEGWI 108 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHH----CCCT-----TCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHc----CCCC-----cccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCc
Confidence 456789999999999999999987 4443 56788999999999999999999999997 9999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCC----------------------
Q 016683 93 PLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSK-GAEV---------------------- 149 (384)
Q Consensus 93 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-~~~~---------------------- 149 (384)
|||+|+..|+.++|++|+++|++++..+..|.||||+|+..++.+++++++.. +.++
T Consensus 109 pL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (299)
T 1s70_B 109 PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSG 188 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999877653 2221
Q ss_pred -----CCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchH
Q 016683 150 -----DSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATP 223 (384)
Q Consensus 150 -----~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~ 223 (384)
.....+.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.. ..|.||
T Consensus 189 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~ 268 (299)
T 1s70_B 189 HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTA 268 (299)
T ss_dssp CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred CcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 12234559999999999999999999999999999999999999999999999999999999999987 789999
Q ss_pred HHHHHhhCCHHHHHHHHHC
Q 016683 224 LHIAADIGSTEIIKCLLKA 242 (384)
Q Consensus 224 L~~A~~~~~~~~v~~Ll~~ 242 (384)
||+|+.. ..+.++.+++.
T Consensus 269 l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 269 FDVADED-ILGYLEELQKK 286 (299)
T ss_dssp TTSCCSG-GGHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHH
Confidence 9999764 45555666553
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.5e-35 Score=250.27 Aligned_cols=188 Identities=22% Similarity=0.229 Sum_probs=138.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCC
Q 016683 89 DGETPLLHAARQGHTETAKYLFEHGA-NPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQ 167 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~ 167 (384)
.+.||||.|+..|+.++++.|+..+. +++..|..|.||||+ |+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~--------------------------------A~~~~~ 51 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNI--------------------------------AVHNND 51 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHH--------------------------------HHHHTC
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHH--------------------------------HHHcCC
Confidence 45556666666666666655555544 555555555555555 555555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCC-C
Q 016683 168 QEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLI-QAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAG-A 244 (384)
Q Consensus 168 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll-~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g-a 244 (384)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|+ ..+.+++.. ..|.||||+|+..|+.+++++|++.| +
T Consensus 52 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 131 (201)
T 3hra_A 52 IEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRE 131 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCC
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 55555566666666777788999999999999999999999 556688776 77999999999999999999999999 9
Q ss_pred CCCCCCCCCCcHHHHHHHcCC-----HHHHHhhcCCCCCCCCCCCCchhhHHHHHHhhhchhHHHHHhhhhc
Q 016683 245 DPNVTDEDGQKPIQVAAARGN-----REAVEILFPLTSEDPSIPKWTVDGILEYMQSESGKQLEETRNLKEN 311 (384)
Q Consensus 245 ~~~~~~~~g~t~l~~A~~~~~-----~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (384)
+++.+|..|.||||+|+..++ .+++++|++.+... +..+..+.+. +..+......+..+.+.+.
T Consensus 132 ~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~--l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 132 DIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ-SIKDNSGRTA--MDYANQKGYTEISKILAQY 200 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT-TCCCTTSCCH--HHHHHHHTCHHHHHHHHTC
T ss_pred CcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC-CccCCCCCCH--HHHHHHcCCHhHHHHHHhc
Confidence 999999999999999999998 99999999987543 3333334444 4444555666777766654
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.1e-37 Score=268.60 Aligned_cols=196 Identities=28% Similarity=0.323 Sum_probs=178.0
Q ss_pred cCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CH
Q 016683 84 DTQDEDGETPLLHAARQGHTETAKYLFEHGA----NPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TP 158 (384)
Q Consensus 84 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~ 158 (384)
+.+|..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++..+..+ ||
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 81 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 3568899999999999999999999998765 789999999999999999999999999999999998877655 99
Q ss_pred hHHHHHcCCHHHHHHHHhCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-C-CCchHHHHHHhh
Q 016683 159 LIWAAGHGQQEAVKVLLEHHAN------PNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-A-GGATPLHIAADI 230 (384)
Q Consensus 159 l~~A~~~~~~~~~~~Ll~~~~~------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~-~g~t~L~~A~~~ 230 (384)
||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++.. . .|.||||+|+..
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 9999999999999999999876 4667788999999999999999999999999999987 4 899999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCC
Q 016683 231 GSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSED 279 (384)
Q Consensus 231 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 279 (384)
|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|++++...
T Consensus 162 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 162 QNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp TCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred CCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 9999999999999999999999999999999999999999999988753
No 45
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.3e-36 Score=269.58 Aligned_cols=205 Identities=25% Similarity=0.305 Sum_probs=126.4
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHHh---CCCCCc----CCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCC--
Q 016683 50 DIKDANKRGALHFAAREGKTDVCKYLLEE---LKLDVD----TQDEDGETPLLHAARQ---GHTETAKYLFEHGANPT-- 117 (384)
Q Consensus 50 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---~~~~~~----~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~-- 117 (384)
+..|..|.||||.|+..|+.++|+.|++. .+.+++ ..+..|.||||+|+.. |+.++|++|+++|+++.
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 45688899999999999999999988873 466665 4588999999999987 99999999999876532
Q ss_pred ---------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC---------------CCCHhHHHHHcCCHHHHHH
Q 016683 118 ---------IPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESD---------------AGTPLIWAAGHGQQEAVKV 173 (384)
Q Consensus 118 ---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~---------------~~~~l~~A~~~~~~~~~~~ 173 (384)
..|..|.||||+|+..|+.+++++|+++|++++..+. +.||||+|+..|+.+++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 2456788888888888888888888888888877664 2255555555555555555
Q ss_pred HHh---CCCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHHcCCCccc-------c-CCCchHHHHHHhhCCH
Q 016683 174 LLE---HHANPNAETEDNITPLLSAVAAGS---------LTCLDLLIQAGANANI-------V-AGGATPLHIAADIGST 233 (384)
Q Consensus 174 Ll~---~~~~~~~~~~~g~t~l~~A~~~~~---------~~~v~~Ll~~g~~~~~-------~-~~g~t~L~~A~~~~~~ 233 (384)
|++ .|++++.+|..|.||||+|+..|+ .+++++|+++|++++. . ..|+||||+|+..|+.
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 555 445555555555555555554444 4444444444444431 1 3344444444444444
Q ss_pred HHHHHHHHCCC-CCCCCCCCCC
Q 016683 234 EIIKCLLKAGA-DPNVTDEDGQ 254 (384)
Q Consensus 234 ~~v~~Ll~~ga-~~~~~~~~g~ 254 (384)
+++++|+++|+ |+......+.
T Consensus 247 ~iv~~Ll~~ga~dp~~~~~~~~ 268 (273)
T 2pnn_A 247 GVLAYILQREIHEPECRHAAAH 268 (273)
T ss_dssp HHHHHHHHHHTC----------
T ss_pred HHHHHHHHCCCCCchhhhhhhh
Confidence 44444444444 3444333333
No 46
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-37 Score=280.15 Aligned_cols=231 Identities=23% Similarity=0.269 Sum_probs=176.6
Q ss_pred CChHHHHHHHHHhhhcCCCccchhh--------hcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcC-CCCCCCcHHH
Q 016683 25 GNLDLLKKIAKQLDDQGKGLSKTVA--------DIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDT-QDEDGETPLL 95 (384)
Q Consensus 25 g~~~~v~~ll~~~~~~~~~~~~~~~--------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~ 95 (384)
|+.++|+.|+++..+.+........ ..+.....+.+|.|+..+..+++++|++. |+++|. +|..|.||||
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~-g~dvn~~~d~~g~TpLh 136 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT-QLNLNIPVDEHGNTPLH 136 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS-CCCSCSCCSTTCCCHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc-CCCcccccCCCCCcHHH
Confidence 8999999999885432211000000 00111223346888888888999999987 999999 8999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHhCC-CCCCCCCCCC-CHhHHHHH----cC
Q 016683 96 HAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGN---IELLTYLLSKG-AEVDSESDAG-TPLIWAAG----HG 166 (384)
Q Consensus 96 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---~~~~~~Ll~~~-~~~~~~~~~~-~~l~~A~~----~~ 166 (384)
+|+..|+.++|++|+++|++++..|..|.||||+|+..|+ .++++.|++.+ .+++..+..+ ||||+|+. .|
T Consensus 137 ~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g 216 (327)
T 1sw6_A 137 WLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTG 216 (327)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccc
Confidence 9999999999999999999999999999999999999998 67777777776 5566665555 99999999 99
Q ss_pred CHHHHHHHHhC--------------------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHH
Q 016683 167 QQEAVKVLLEH--------------------HANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLH 225 (384)
Q Consensus 167 ~~~~~~~Ll~~--------------------~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~ 225 (384)
+.+++++|++. |++++..+..|.||||.|+. +++|++++ ++.. ..|+||||
T Consensus 217 ~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~--~n~~d~~G~TpLh 288 (327)
T 1sw6_A 217 CSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM--LNAQDSNGDTCLN 288 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT--TTCCCTTSCCHHH
T ss_pred cHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC--CCCCCCCCCCHHH
Confidence 99999999987 89999999999999999985 89999984 5555 77999999
Q ss_pred HHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 016683 226 IAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARG 264 (384)
Q Consensus 226 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 264 (384)
+|+..|+.++|++|+++|++++.+|..|+||||+|+.+|
T Consensus 289 ~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 289 IAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 999999999999999999999999999999999998765
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=5.4e-36 Score=262.98 Aligned_cols=203 Identities=20% Similarity=0.240 Sum_probs=153.4
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHhCCCCCcC----CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCCC----
Q 016683 55 NKRGALHFAAREGKTD----VCKYLLEELKLDVDT----QDEDGETPLLHAARQ---GHTETAKYLFEHGANPTIP---- 119 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~----~v~~Ll~~~~~~~~~----~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~---- 119 (384)
.|+||||.|+..|+.+ ++++|++. |++++. .|..|.||||+|+.. |+.++|++|+++|++++..
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 3789999999999997 56677767 899998 889999999999999 9999999999988877643
Q ss_pred -------CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Q 016683 120 -------SNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPL 192 (384)
Q Consensus 120 -------~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l 192 (384)
|..|.||||+|+..|+.+++++|+++|++++..+..+. ...+.+..+..|.|||
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~-------------------~~~~~~~~~~~g~tpL 140 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRF-------------------FQKHQGTCFYFGELPL 140 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG-------------------GSCCSSSCCCSCSSHH
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccc-------------------ccccccccccCCCCHH
Confidence 35678888888888888888888888777766554321 0012222333477777
Q ss_pred HHHHHcCCHHHHHHHHH---cCCCcccc-CCCchHHHHHHh--hCCHH-------HHHHHHHCCCCC-------CCCCCC
Q 016683 193 LSAVAAGSLTCLDLLIQ---AGANANIV-AGGATPLHIAAD--IGSTE-------IIKCLLKAGADP-------NVTDED 252 (384)
Q Consensus 193 ~~A~~~~~~~~v~~Ll~---~g~~~~~~-~~g~t~L~~A~~--~~~~~-------~v~~Ll~~ga~~-------~~~~~~ 252 (384)
|+|+..|+.+++++|++ +|++++.. ..|+||||+|+. .++.+ ++++|+++|+++ +.+|..
T Consensus 141 ~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~ 220 (256)
T 2etb_A 141 SLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQ 220 (256)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTT
T ss_pred HHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCC
Confidence 77777777777777777 77777766 667777777777 66766 888888888877 778888
Q ss_pred CCcHHHHHHHcCCHHHHHhhcCCCC
Q 016683 253 GQKPIQVAAARGNREAVEILFPLTS 277 (384)
Q Consensus 253 g~t~l~~A~~~~~~~~v~~Ll~~~~ 277 (384)
|+||||+|+..|+.+++++|++++.
T Consensus 221 g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 221 GLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 8888888888888888888887654
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=5.1e-36 Score=263.14 Aligned_cols=202 Identities=21% Similarity=0.236 Sum_probs=153.3
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHCCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCCC
Q 016683 89 DGETPLLHAARQGHTE----TAKYLFEHGANPTI----PSNLGATALHHSAGI---GNIELLTYLLSKGAEVDSESDAGT 157 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~----~~~~g~t~L~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~~ 157 (384)
.|+||||.|+..|+.+ ++++|+++|++++. .|..|.||||+|+.. |+.+++++|++.|++++....
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~--- 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP--- 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC---
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh---
Confidence 3789999999999997 66777889999998 899999999999999 999999999998877653221
Q ss_pred HhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC--------------CCchH
Q 016683 158 PLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIVA--------------GGATP 223 (384)
Q Consensus 158 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~--------------~g~t~ 223 (384)
++. ......+..|.||||+|+..|+.+++++|+++|++++... .|.||
T Consensus 78 ----------------~~~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tp 139 (256)
T 2etb_A 78 ----------------LVN--AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELP 139 (256)
T ss_dssp ----------------GGG--CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSH
T ss_pred ----------------hcc--cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCH
Confidence 000 1112233456666666666666666666666666666552 29999
Q ss_pred HHHHHhhCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHH--cCCHH-------HHHhhcCCCCCCC------CCCCC
Q 016683 224 LHIAADIGSTEIIKCLLK---AGADPNVTDEDGQKPIQVAAA--RGNRE-------AVEILFPLTSEDP------SIPKW 285 (384)
Q Consensus 224 L~~A~~~~~~~~v~~Ll~---~ga~~~~~~~~g~t~l~~A~~--~~~~~-------~v~~Ll~~~~~~~------~~~~~ 285 (384)
||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++++|++.+.... ...+.
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~ 219 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNH 219 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCC
Confidence 999999999999999999 999999999999999999999 88888 9999998876442 23333
Q ss_pred chhhHHHHHHhhhchhHHHHHhhhhcCC
Q 016683 286 TVDGILEYMQSESGKQLEETRNLKENNA 313 (384)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (384)
. +.+++..+......+..+.+.+.+.
T Consensus 220 ~--g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 220 Q--GLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp T--SCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred C--CCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 3 4444555566667777777776544
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.6e-34 Score=236.32 Aligned_cols=157 Identities=39% Similarity=0.553 Sum_probs=121.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 016683 58 GALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIE 137 (384)
Q Consensus 58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 137 (384)
+.|+.||+.|+.++|++|++. |+++|.+|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 368888888888888888887 8888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q 016683 138 LLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANAN 215 (384)
Q Consensus 138 ~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~ 215 (384)
++++|+++|++++..+..+ ||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 8888888777777665544 77777777777777777777777777777777777777777777777777777666665
No 50
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.7e-34 Score=236.23 Aligned_cols=156 Identities=38% Similarity=0.578 Sum_probs=117.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHH
Q 016683 92 TPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEA 170 (384)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~ 170 (384)
++|+.||..|+.++|++|+++|++++.+|..|.||||+|+..++.+++++|++.|++++..+..+ ||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 46889999999999999999999999999999999999988888888888888888777666544 77777777777777
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCC
Q 016683 171 VKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPN 247 (384)
Q Consensus 171 ~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 247 (384)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.. ..|+||||+|+..|+.+++++|+++|++++
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 77777777777777777777777777777777777777777766655 556677777777777777777777776654
No 51
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=8.7e-36 Score=264.20 Aligned_cols=205 Identities=20% Similarity=0.251 Sum_probs=173.8
Q ss_pred CCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHH----CCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCC
Q 016683 80 KLDVDTQDEDGETPLLHAARQGHTETAKYLFE----HGANPT----IPSNLGATALHHSAGI---GNIELLTYLLSKGAE 148 (384)
Q Consensus 80 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~----~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~~~~ 148 (384)
++..+..|..|.||||.|+..|+.++|+.|++ .+++++ ..|..|.||||+|+.. |+.+++++|++.|++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK 82 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc
Confidence 45566788999999999999999999988886 566665 4588999999999987 999999999999864
Q ss_pred C-------CC----C-CCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCC--------------CCCCHHHHHHHcCCHH
Q 016683 149 V-------DS----E-SDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETE--------------DNITPLLSAVAAGSLT 202 (384)
Q Consensus 149 ~-------~~----~-~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~--------------~g~t~l~~A~~~~~~~ 202 (384)
. +. . ..+.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+
T Consensus 83 ~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 83 TDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred ccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 2 11 2 2455999999999999999999999999999987 7999999999999999
Q ss_pred HHHHHHH---cCCCcccc-CCCchHHHHHHhhCC---------HHHHHHHHHCCCCCC-------CCCCCCCcHHHHHHH
Q 016683 203 CLDLLIQ---AGANANIV-AGGATPLHIAADIGS---------TEIIKCLLKAGADPN-------VTDEDGQKPIQVAAA 262 (384)
Q Consensus 203 ~v~~Ll~---~g~~~~~~-~~g~t~L~~A~~~~~---------~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~~ 262 (384)
++++|++ .|++++.. ..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+.
T Consensus 163 ~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~ 242 (273)
T 2pnn_A 163 IVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAAS 242 (273)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHH
Confidence 9999999 99999987 789999999999998 899999999999987 589999999999999
Q ss_pred cCCHHHHHhhcCCCCCCCCCCC
Q 016683 263 RGNREAVEILFPLTSEDPSIPK 284 (384)
Q Consensus 263 ~~~~~~v~~Ll~~~~~~~~~~~ 284 (384)
.|+.+++++|++++..++....
T Consensus 243 ~g~~~iv~~Ll~~ga~dp~~~~ 264 (273)
T 2pnn_A 243 SGKIGVLAYILQREIHEPECRH 264 (273)
T ss_dssp TTCHHHHHHHHHHHTC------
T ss_pred hChHHHHHHHHHCCCCCchhhh
Confidence 9999999999999887665544
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=6.2e-34 Score=250.36 Aligned_cols=207 Identities=21% Similarity=0.206 Sum_probs=141.6
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHH----hCCCCCcCCC----CCCCcHHHHHH---HcCCHHHHHHHHHCCCC------
Q 016683 53 DANKRGALHFAAREGKTDVCKYLLE----ELKLDVDTQD----EDGETPLLHAA---RQGHTETAKYLFEHGAN------ 115 (384)
Q Consensus 53 d~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~----~~g~t~L~~A~---~~g~~~~v~~Ll~~g~~------ 115 (384)
+..|.|+||.|+..|+.+.++.|++ . +.+++..+ ..|.||||+|+ ..|+.++|++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH-KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc-CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 3467889999999999985554444 5 88888665 67999999998 67999999999988754
Q ss_pred -----CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCC
Q 016683 116 -----PTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNIT 190 (384)
Q Consensus 116 -----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t 190 (384)
.+..|..|.||||+|+..|+.+++++|+++|++++..+.+.. -...+....+..|.|
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~------------------~~~~~~~~~~~~g~t 142 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRF------------------FQPKDEGGYFYFGEL 142 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECC------------------CSSSCCCCSCCSCSS
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccc------------------cCcccccccccCCCC
Confidence 233344677777777777777777777777766665542100 000111122245667
Q ss_pred HHHHHHHcCCHHHHHHHHH---cCCCcccc-CCCchHHHHHHhhCC---------HHHHHHHHHCCCCC-------CCCC
Q 016683 191 PLLSAVAAGSLTCLDLLIQ---AGANANIV-AGGATPLHIAADIGS---------TEIIKCLLKAGADP-------NVTD 250 (384)
Q Consensus 191 ~l~~A~~~~~~~~v~~Ll~---~g~~~~~~-~~g~t~L~~A~~~~~---------~~~v~~Ll~~ga~~-------~~~~ 250 (384)
|||+|+..|+.+++++|++ .|++++.. ..|+||||+|+..++ .+++++|+++|+++ +.+|
T Consensus 143 pL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d 222 (260)
T 3jxi_A 143 PLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLN 222 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhccc
Confidence 7777777777777777777 66666665 567777777776665 57777777777776 5677
Q ss_pred CCCCcHHHHHHHcCCHHHHHhhcCCCCC
Q 016683 251 EDGQKPIQVAAARGNREAVEILFPLTSE 278 (384)
Q Consensus 251 ~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 278 (384)
..|+||||+|+..|+.+++++|++++..
T Consensus 223 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 223 NDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 7777777777777777777777776553
No 53
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-35 Score=268.76 Aligned_cols=251 Identities=17% Similarity=0.108 Sum_probs=192.3
Q ss_pred HHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCC--------
Q 016683 15 VQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQ-------- 86 (384)
Q Consensus 15 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------- 86 (384)
.+....++.....+++++|++. |.++ +..+..|.|+++ |+.++|++|+++ |++++..
T Consensus 20 ~~~~~~~~~~~~~dlv~~ll~~----ga~i-----~~~~~~g~~~~~-----g~~~~v~~Ll~~-g~~~~~~~~~~a~~~ 84 (327)
T 1sw6_A 20 NDRTAGPIITFTHDLTSDFLSS----PLKI-----MKALPSPVVNDN-----EQKMKLEAFLQR-LLFPEIQEMPTSLNN 84 (327)
T ss_dssp -----CCEEECCTTCCCSTTTS----SCCC-----EECBCCCCCCCH-----HHHHHHHHHHHH-HHC------------
T ss_pred ccccccchhhhcCchHHHHhhC----Cccc-----ccCCCCCCcccC-----chhHHHHHHHHh-ccCCccccchHhhhc
Confidence 3444445555666778887776 5554 567788999987 999999999998 8776541
Q ss_pred ---------CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 016683 87 ---------DEDGETPLLHAARQGHTETAKYLFEHGANPTI-PSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG 156 (384)
Q Consensus 87 ---------~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~ 156 (384)
.....+.+|+|+..+..+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|++++..+..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g 164 (327)
T 1sw6_A 85 DSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMG 164 (327)
T ss_dssp -------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTC
T ss_pred ccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 11122345888888889999999999999999 89999999999999999999999999999999877665
Q ss_pred -CHhHHHHHcCC---HHHHHHHHhCC-CCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHc-----------------
Q 016683 157 -TPLIWAAGHGQ---QEAVKVLLEHH-ANPNAETEDNITPLLSAVA----AGSLTCLDLLIQA----------------- 210 (384)
Q Consensus 157 -~~l~~A~~~~~---~~~~~~Ll~~~-~~~~~~~~~g~t~l~~A~~----~~~~~~v~~Ll~~----------------- 210 (384)
||||+|+..|+ .++++.|++.+ .+++..+..|.||||+|+. .|+.+++++|++.
T Consensus 165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~ 244 (327)
T 1sw6_A 165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 244 (327)
T ss_dssp CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-
T ss_pred CCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhh
Confidence 99999999998 67777777776 6789999999999999999 8999999999987
Q ss_pred ---CCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCCCCCCCCc
Q 016683 211 ---GANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSEDPSIPKWT 286 (384)
Q Consensus 211 ---g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 286 (384)
|++++.. ..|.||||.|+. +++|+++ +++.+|..|+||||+|+..|+.+++++|++++... ...+..
T Consensus 245 ~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~-~~~d~~ 315 (327)
T 1sw6_A 245 NEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP-FIANKS 315 (327)
T ss_dssp ---------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT-TCCCTT
T ss_pred hcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCC
Confidence 7888877 789999999986 8999998 68999999999999999999999999999987653 333333
Q ss_pred hhh
Q 016683 287 VDG 289 (384)
Q Consensus 287 ~~~ 289 (384)
+.+
T Consensus 316 G~T 318 (327)
T 1sw6_A 316 GLR 318 (327)
T ss_dssp SCC
T ss_pred CCC
Confidence 333
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=5e-34 Score=250.98 Aligned_cols=206 Identities=17% Similarity=0.222 Sum_probs=158.2
Q ss_pred CCCCCcHHHHHHHcCCHHH----HHHHHHCCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHHhCCCCCCCCCCC
Q 016683 87 DEDGETPLLHAARQGHTET----AKYLFEHGANPTIPS----NLGATALHHSA---GIGNIELLTYLLSKGAEVDSESDA 155 (384)
Q Consensus 87 ~~~g~t~L~~A~~~g~~~~----v~~Ll~~g~~~~~~~----~~g~t~L~~A~---~~~~~~~~~~Ll~~~~~~~~~~~~ 155 (384)
+..|+|+||.|+..|+.++ +++|++.|++++..+ ..|.||||+|+ ..|+.+++++|++.|++....
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~--- 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM--- 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH---
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch---
Confidence 4578899999999999995 455555899988665 66999999998 679999999999887553210
Q ss_pred CCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC---------------CC
Q 016683 156 GTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIVA---------------GG 220 (384)
Q Consensus 156 ~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~---------------~g 220 (384)
..++ ..+.+..+..|.||||+|+..|+.+++++|+++|++++... .|
T Consensus 79 ----------------~~~~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 140 (260)
T 3jxi_A 79 ----------------REFI--NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFG 140 (260)
T ss_dssp ----------------HHHH--TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSC
T ss_pred ----------------Hhhh--cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCC
Confidence 0111 23344455577888888888888888888888888777663 69
Q ss_pred chHHHHHHhhCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHHcCC---------HHHHHhhcCCCCCCC------CC
Q 016683 221 ATPLHIAADIGSTEIIKCLLK---AGADPNVTDEDGQKPIQVAAARGN---------REAVEILFPLTSEDP------SI 282 (384)
Q Consensus 221 ~t~L~~A~~~~~~~~v~~Ll~---~ga~~~~~~~~g~t~l~~A~~~~~---------~~~v~~Ll~~~~~~~------~~ 282 (384)
.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ .+++++|++.+.... ..
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~ 220 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEAL 220 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhc
Confidence 999999999999999999999 999999999999999999999888 799999998865432 22
Q ss_pred CCCchhhHHHHHHhhhchhHHHHHhhhhcCCCC
Q 016683 283 PKWTVDGILEYMQSESGKQLEETRNLKENNAPK 315 (384)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (384)
.+ ..+.+++..+......+.++.+++.+...
T Consensus 221 ~d--~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 221 LN--NDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp CC--TTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cc--CCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 33 33445555566677788888887765533
No 55
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=5.3e-32 Score=226.90 Aligned_cols=163 Identities=28% Similarity=0.355 Sum_probs=129.9
Q ss_pred hhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 016683 48 VADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATAL 127 (384)
Q Consensus 48 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 127 (384)
+.+.+|..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.|||
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL 105 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 3466788899999999999999999999987 888888888899999999999999999999998888888888888888
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Q 016683 128 HHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDL 206 (384)
Q Consensus 128 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 206 (384)
|+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++..+..|.||+++|+..|+.+++++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHH
Confidence 88888888888888888887776655444 77777777777777777777777777777777777777777777777666
Q ss_pred HHHcC
Q 016683 207 LIQAG 211 (384)
Q Consensus 207 Ll~~g 211 (384)
|+++|
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 66643
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=244.27 Aligned_cols=195 Identities=22% Similarity=0.287 Sum_probs=145.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCC--CcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHH
Q 016683 55 NKRGALHFAAREGKTDVCKYLLEELKLD--VDTQDEDGETPLLHAARQGHTETAKYLFEHGA-NPTIPSNLGATALHHSA 131 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~ 131 (384)
...+++|.|+..|+++.++.+++. +.+ +|..|..|+||||+|+..|+.++|++|++.|+ +++..+..|.||||+|+
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSAR-LLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHH-HHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred HhccCCCHHHHHHHHHHHHHHHHH-HHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 456677777777888777777765 433 67777778888888888888888888888777 77777777777777776
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 016683 132 GIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAG 211 (384)
Q Consensus 132 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g 211 (384)
... +...++.+++++|++.|.+.+..+..|.||||+|+..|+.+++++|+++|
T Consensus 154 ~~~---------------------------~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g 206 (276)
T 4hbd_A 154 LAT---------------------------LKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE 206 (276)
T ss_dssp GCC---------------------------CCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHH---------------------------hhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 210 00234555666666666666666677777777777777777777777777
Q ss_pred CCcccc-CCCchHHHHHHhhCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCC
Q 016683 212 ANANIV-AGGATPLHIAADIGSTEIIKCLLK-AGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTS 277 (384)
Q Consensus 212 ~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 277 (384)
++++.. ..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++..
T Consensus 207 ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 207 ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 777766 678888888888888888888888 788888888888888888888888888888886543
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=6.3e-33 Score=245.99 Aligned_cols=186 Identities=20% Similarity=0.290 Sum_probs=140.3
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCC-CCCCCCCCCCCHHHHHH----
Q 016683 125 TALHHSAGIGNIELLTYLLSKGAE--VDSESDAG-TPLIWAAGHGQQEAVKVLLEHHA-NPNAETEDNITPLLSAV---- 196 (384)
Q Consensus 125 t~L~~A~~~~~~~~~~~Ll~~~~~--~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~A~---- 196 (384)
+++|.|+..++.+.++.+++.+.+ ++..+..+ ||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL 157 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence 344555555555555555444333 33333333 66666666677777777777776 77888888999999999
Q ss_pred -HcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcC
Q 016683 197 -AAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFP 274 (384)
Q Consensus 197 -~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 274 (384)
..++.+++++|++.|.+++.. ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 158 KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 668899999999999888776 679999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCchhhHHHHHHhhhchhHHHHHhhhhcC
Q 016683 275 LTSEDPSIPKWTVDGILEYMQSESGKQLEETRNLKENN 312 (384)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (384)
..+.+.+..+..+.+.+. .+......+..+.+.+..
T Consensus 238 ~~gad~~~~d~~g~TpL~--~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 238 VPSCDISLTDRDGSTALM--VALDAGQSEIASMLYSRM 273 (276)
T ss_dssp STTCCTTCCCTTSCCHHH--HHHHHTCHHHHHHHHHHC
T ss_pred cCCCCCcCcCCCCCCHHH--HHHHcCCHHHHHHHHhcc
Confidence 545555555555544444 445556677777666543
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.98 E-value=1.3e-31 Score=224.52 Aligned_cols=161 Identities=29% Similarity=0.348 Sum_probs=116.6
Q ss_pred CcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHH
Q 016683 83 VDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWA 162 (384)
Q Consensus 83 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A 162 (384)
+|.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------ 95 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN------------ 95 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT------------
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC------------
Confidence 46778889999999999999999999999999888888888888888887777777777776665554
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHH
Q 016683 163 AGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLK 241 (384)
Q Consensus 163 ~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~ 241 (384)
..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|++
T Consensus 96 --------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (192)
T 2rfm_A 96 --------------------TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLE 155 (192)
T ss_dssp --------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------------CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 44445555555565556666666666666555554 456667777777777777777777
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCC
Q 016683 242 AGADPNVTDEDGQKPIQVAAARGNREAVEILFPL 275 (384)
Q Consensus 242 ~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 275 (384)
+|++++.+|..|.||+++|+..|+.+++++|+++
T Consensus 156 ~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 156 LGADISARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 7777777777777777777777777777776653
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=1.6e-31 Score=219.89 Aligned_cols=169 Identities=26% Similarity=0.374 Sum_probs=115.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 016683 56 KRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGN 135 (384)
Q Consensus 56 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 135 (384)
+.||||.|+..|+.+++++|++..+..++..+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 46788889999999988888887444478888888889998888888888888888888888888888888888777777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q 016683 136 IELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANAN 215 (384)
Q Consensus 136 ~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~ 215 (384)
.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 82 ~~~v~~Ll~~g~~~~--------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 129 (172)
T 3v30_A 82 TDIVGLLLERDVDIN--------------------------------IYDWNGGTPLLYAVRGNHVKCVEALLARGADLT 129 (172)
T ss_dssp HHHHHHHHTTTCCTT--------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHcCCCCC--------------------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 777776666665554 444455555555555555555555555555555
Q ss_pred cc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcH
Q 016683 216 IV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKP 256 (384)
Q Consensus 216 ~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 256 (384)
.. ..|.||||+|+..|+.+++++|+++|+++...+..|.||
T Consensus 130 ~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 130 TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred ccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 44 446666666666666666666666666666666666555
No 60
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=1.2e-31 Score=220.66 Aligned_cols=154 Identities=29% Similarity=0.453 Sum_probs=120.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCC-CCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 016683 125 TALHHSAGIGNIELLTYLLSKGAE-VDSESDA-GTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLT 202 (384)
Q Consensus 125 t~L~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~-~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~ 202 (384)
||||.|+..|+.+++++|++.+.. ++..+.. .||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 344444444444444444444433 2222222 25555555556666666666667777778888999999999999999
Q ss_pred HHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCC
Q 016683 203 CLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSE 278 (384)
Q Consensus 203 ~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 278 (384)
++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++..
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 84 IVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 999999999999987 7899999999999999999999999999999999999999999999999999999987654
No 61
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=4.8e-31 Score=215.96 Aligned_cols=158 Identities=27% Similarity=0.392 Sum_probs=127.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 016683 55 NKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIG 134 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 134 (384)
.|.||||.|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 578999999999999999999988 8889999999999999999999999999999999999988888889988888888
Q ss_pred CHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 016683 135 NIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGAN 213 (384)
Q Consensus 135 ~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~ 213 (384)
+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++++.+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 8888888888887777655444 777777777777777777777777777777777777777777777777666665543
No 62
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.98 E-value=5.9e-31 Score=215.90 Aligned_cols=159 Identities=32% Similarity=0.438 Sum_probs=125.5
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 016683 52 KDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSA 131 (384)
Q Consensus 52 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 131 (384)
....+.++|+.|+..|+.+++++|++. |++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 345577899999999999999999987 8999999999999999999999999999999999999988888899988888
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 016683 132 GIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQA 210 (384)
Q Consensus 132 ~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 210 (384)
..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 8888888888888887776655444 777777777777777777777777776666666666666666666666666655
Q ss_pred C
Q 016683 211 G 211 (384)
Q Consensus 211 g 211 (384)
|
T Consensus 169 G 169 (169)
T 2y1l_E 169 N 169 (169)
T ss_dssp -
T ss_pred C
Confidence 4
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=4.6e-31 Score=214.86 Aligned_cols=155 Identities=29% Similarity=0.368 Sum_probs=98.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 016683 56 KRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGN 135 (384)
Q Consensus 56 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 135 (384)
..||||.|+..|+.+++++|++. |++++..+..|.||||+|+. |+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HhhHHHHHHHcCCHHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 45677777777777777777775 77777777777777777777 77777777777777777777777777777777776
Q ss_pred HHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 016683 136 IELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHAN-PNAETEDNITPLLSAVAAGSLTCLDLLIQAGA 212 (384)
Q Consensus 136 ~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~ 212 (384)
.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 666666666666555444333 555555555555555555555444 24444444444444444444444444444443
No 64
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=6.1e-31 Score=214.11 Aligned_cols=156 Identities=28% Similarity=0.346 Sum_probs=116.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCC
Q 016683 89 DGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQ 167 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~ 167 (384)
...||||.|+..|+.+++++|+++|++++..+..|.||||+|+. |+.+++++|+++|++++..+..+ ||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 45688999999999999999999999998888888899888888 88888888888888777665444 77777777777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccc-CCCchHHHHHHhhCCHHHHHHHHHCCCC
Q 016683 168 QEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANA-NIV-AGGATPLHIAADIGSTEIIKCLLKAGAD 245 (384)
Q Consensus 168 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~-~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 245 (384)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++. +.. ..|.||||+|+..|+.+++++|+++|+|
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 77777777777777777777777777777777777777777776663 444 5566777777777777777777766654
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=2e-30 Score=212.68 Aligned_cols=157 Identities=38% Similarity=0.550 Sum_probs=109.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcC
Q 016683 87 DEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHG 166 (384)
Q Consensus 87 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~ 166 (384)
...+.|+|+.|+..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|+++
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----------------- 73 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV----------------- 73 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-----------------
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----------------
Confidence 345567777777777777777777777777777777777777777666666666666655554
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCC
Q 016683 167 QQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGAD 245 (384)
Q Consensus 167 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 245 (384)
+..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++
T Consensus 74 ---------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 138 (169)
T 2y1l_E 74 ---------------NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138 (169)
T ss_dssp ---------------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ---------------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 444555666666666666666666666666666555 5567777777777777777777777777
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHhhcCC
Q 016683 246 PNVTDEDGQKPIQVAAARGNREAVEILFPL 275 (384)
Q Consensus 246 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 275 (384)
++.+|..|.|||++|+..|+.+++++|+++
T Consensus 139 ~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 139 VNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 777777777777777777777777777765
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=9.6e-31 Score=214.14 Aligned_cols=155 Identities=24% Similarity=0.329 Sum_probs=101.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCH
Q 016683 89 DGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQ 168 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~ 168 (384)
.|.||||.|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------------- 64 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL----------------- 64 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----------------
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-----------------
Confidence 467788888888888888888888888777777777777777777777777777666665554
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCC
Q 016683 169 EAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPN 247 (384)
Q Consensus 169 ~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 247 (384)
.+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++
T Consensus 65 ---------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 129 (167)
T 3v31_A 65 ---------------LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT 129 (167)
T ss_dssp ---------------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ---------------cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4444555555555555555555555555555544 445566666666666666666666666666
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHhhcCC
Q 016683 248 VTDEDGQKPIQVAAARGNREAVEILFPL 275 (384)
Q Consensus 248 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 275 (384)
.+|..|.||+|+|+..|+.+++++|+++
T Consensus 130 ~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 130 IETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 6666666666666666666666666544
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.4e-30 Score=215.81 Aligned_cols=163 Identities=23% Similarity=0.290 Sum_probs=124.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q 016683 54 ANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGI 133 (384)
Q Consensus 54 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 133 (384)
..+.++||.||..|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 35778999999999999999999987888999999999999999999999999999999999999999999999888888
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 016683 134 GNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGA 212 (384)
Q Consensus 134 ~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~ 212 (384)
|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++..+..|.|||++|+..++.+++++|+++|+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 88888888888777776655443 66666666666666666666666666666666666666666555666666666665
Q ss_pred Cccc
Q 016683 213 NANI 216 (384)
Q Consensus 213 ~~~~ 216 (384)
+++.
T Consensus 163 ~~~~ 166 (179)
T 3f6q_A 163 NLNR 166 (179)
T ss_dssp CCSC
T ss_pred Cccc
Confidence 5553
No 68
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=8e-31 Score=214.16 Aligned_cols=160 Identities=29% Similarity=0.379 Sum_probs=137.8
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 016683 52 KDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSA 131 (384)
Q Consensus 52 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 131 (384)
.+..|.|+||.|+..|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 46678999999999999999999999778888999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 016683 132 GIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQA 210 (384)
Q Consensus 132 ~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 210 (384)
..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++.++..|.||+|+|+. ++.+++++|+++
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~ 162 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGD 162 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhc
Confidence 9999999999999988887766554 88888888888888888888888888888888888887655 777888887776
Q ss_pred CC
Q 016683 211 GA 212 (384)
Q Consensus 211 g~ 212 (384)
|+
T Consensus 163 gA 164 (165)
T 3twr_A 163 AA 164 (165)
T ss_dssp --
T ss_pred cc
Confidence 64
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.6e-30 Score=208.42 Aligned_cols=148 Identities=27% Similarity=0.375 Sum_probs=109.4
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 016683 125 TALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCL 204 (384)
Q Consensus 125 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v 204 (384)
|+|+.|+..|+.+++++|++.|.+++....+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 83 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIV 83 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHH
Confidence 44444444444444444444444444333333555555555666666666666666667777788888888888888888
Q ss_pred HHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhh
Q 016683 205 DLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEIL 272 (384)
Q Consensus 205 ~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~L 272 (384)
++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 84 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 84 EVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 8888888888766 6788999999999999999999999999999999999999999999999999887
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=8.2e-30 Score=205.47 Aligned_cols=150 Identities=27% Similarity=0.387 Sum_probs=120.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 016683 56 KRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGN 135 (384)
Q Consensus 56 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 135 (384)
+.|+||.|+..|+.+++++|++. |.+++ .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 45789999999999999999987 77776 57788999999999999999999999999998888888888888888888
Q ss_pred HHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 016683 136 IELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLL 207 (384)
Q Consensus 136 ~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L 207 (384)
.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 888888888887777665544 777777777777777777777777777777777777777777777776665
No 71
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=1.2e-33 Score=259.62 Aligned_cols=235 Identities=16% Similarity=0.169 Sum_probs=178.4
Q ss_pred HHHHHHHHHH-cCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCC---CcCCCCC
Q 016683 14 RVQQFLNAAC-TGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLD---VDTQDED 89 (384)
Q Consensus 14 ~~~~l~~A~~-~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~ 89 (384)
....++.|.. .++.++++++++. +.++.||||+|+..|+.++|++|++. |.. .+..+..
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~----------------g~~~~T~Lh~Aa~~G~~e~v~~Ll~~-ga~~~~~~~~~~~ 127 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKK----------------GIKSEVICFVAAITGCSSALDTLCLL-LTSDEIVKVIQAE 127 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHH----------------TCCHHHHHHHHHHHCCHHHHHHHTTC---CCSSCC--CHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHc----------------CCCcCCHHHHHHHcCCHHHHHHHHHc-CCcHHHHHHhccC
Confidence 3445555555 4777777777765 34567999999999999999999987 652 2244567
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC--CCC-CCCHhHHHH
Q 016683 90 GETPLLHAARQGHTETAKYLFEHGANP---TIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDS--ESD-AGTPLIWAA 163 (384)
Q Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~--~~~-~~~~l~~A~ 163 (384)
|.||||+|+.+|+.++|++|+++|+++ +..+.. .||||+|+..|+.+++++|+++|++++. .+. +.||||+|+
T Consensus 128 ~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa 206 (376)
T 2aja_A 128 NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 206 (376)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHH
Confidence 889999999999999999999999763 222223 8999999999999999999999998654 333 349999999
Q ss_pred -HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCchHHHHHHhhC-----------
Q 016683 164 -GHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIVAGGATPLHIAADIG----------- 231 (384)
Q Consensus 164 -~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~----------- 231 (384)
..|+.+++++|++.|+ .|.|||+.|+..|+.+++++|+++|++++.. .++++.|+..|
T Consensus 207 ~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~---~~~l~~A~~~g~~~vv~~~~~~ 276 (376)
T 2aja_A 207 VGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEM---HDAFKLSNPDGVFDLVTKSECL 276 (376)
T ss_dssp STTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHH---HTTTTTTSSSSCCCCSSHHHHH
T ss_pred HHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccccc---cHHHHHHHHCCChhhhcHHhhh
Confidence 9999999999999774 2789999999999999999999999876542 12333333333
Q ss_pred ----------------CHHHHHHHHHCCC-----CCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCC
Q 016683 232 ----------------STEIIKCLLKAGA-----DPNVTDEDGQKPIQVAAARGNREAVEILFPLT 276 (384)
Q Consensus 232 ----------------~~~~v~~Ll~~ga-----~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 276 (384)
..+.+++|++.+. +.......+.||||+|+..|+.+++++|++.+
T Consensus 277 ~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 277 QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp HHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred hhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh
Confidence 3455666665321 11222345679999999999999999999764
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.4e-33 Score=243.02 Aligned_cols=197 Identities=22% Similarity=0.246 Sum_probs=123.5
Q ss_pred HHHHHhCCCCCcCCC---CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 016683 73 KYLLEELKLDVDTQD---EDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEV 149 (384)
Q Consensus 73 ~~Ll~~~~~~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 149 (384)
+.|+++ +.+++..+ ..|.||||.|+..|+.++|++|++.|++++..|..|.||||+|+..|+.+++++|++.|+++
T Consensus 2 ~~ll~~-~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 2 RSVLRK-AGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred eehhcc-CCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 344444 44443332 33444566666666666666666666666666666666666666666666666666666665
Q ss_pred CCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCCHHHHH--HHcCCHHHHHHHHHcCCCcccc-CCCchHH
Q 016683 150 DSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAET-EDNITPLLSA--VAAGSLTCLDLLIQAGANANIV-AGGATPL 224 (384)
Q Consensus 150 ~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~A--~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L 224 (384)
+..+..+ ||||+|+..|+.+++++|++.|++++..+ ..|.||||+| +..|+.+++++|+++|++++.. ..|.||+
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l 160 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL 160 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence 5544433 66666666666666666666666666654 4677777777 6777777777777777776665 4566676
Q ss_pred HHHHhhCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHhhc
Q 016683 225 HIAADIGSTEIIKCLLKAGAD--PNVTDEDGQKPIQVAAARGNREAVEILF 273 (384)
Q Consensus 225 ~~A~~~~~~~~v~~Ll~~ga~--~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 273 (384)
+.++..+. .++|++.|++ ++.+|..|+||||+|+.+|+.++|+.++
T Consensus 161 ~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 161 WDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp SCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred HHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 65444432 2567888888 6788999999999999999999886543
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=6e-30 Score=211.90 Aligned_cols=166 Identities=22% Similarity=0.280 Sum_probs=136.2
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHc
Q 016683 88 EDGETPLLHAARQGHTETAKYLFEH-GANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGH 165 (384)
Q Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~ 165 (384)
..+.++||.|+..|+.++|++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..+ ||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3577889999999999999999987 66788889999999999999999999999999988888766554 888888888
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCC
Q 016683 166 GQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGA 244 (384)
Q Consensus 166 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga 244 (384)
|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..++.+++++|++.|+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 8888888888888888888888888888888888888888888888888776 678888888888888888888888888
Q ss_pred CCCCCCCCC
Q 016683 245 DPNVTDEDG 253 (384)
Q Consensus 245 ~~~~~~~~g 253 (384)
+++..+..+
T Consensus 163 ~~~~~~~~~ 171 (179)
T 3f6q_A 163 NLNRIPYKD 171 (179)
T ss_dssp CCSCBCCCC
T ss_pred CcccCCccc
Confidence 877665443
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.3e-33 Score=243.11 Aligned_cols=187 Identities=20% Similarity=0.185 Sum_probs=169.2
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 016683 50 DIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHH 129 (384)
Q Consensus 50 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 129 (384)
+..+.+|.||||.|+..|+.+++++|++. |++++..|..|.||||+|+..|+.++|++|+++|++++..|..|.||||+
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~ 93 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHC 93 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 45577888999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCC--CCCCHhHHH--HHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 016683 130 SAGIGNIELLTYLLSKGAEVDSES--DAGTPLIWA--AGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLD 205 (384)
Q Consensus 130 A~~~~~~~~~~~Ll~~~~~~~~~~--~~~~~l~~A--~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~ 205 (384)
|+..|+.+++++|++.|++++..+ .+.|||++| +..|+.+++++|++.|++++..+..|.++++.++..+. .+
T Consensus 94 A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~ 170 (229)
T 2vge_A 94 AASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DE 170 (229)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TB
T ss_pred HHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---cc
Confidence 999999999999999999998874 455999999 99999999999999999999999999999986655543 36
Q ss_pred HHHHcCCCccc--c-CCCchHHHHHHhhCCHHHHHHHH
Q 016683 206 LLIQAGANANI--V-AGGATPLHIAADIGSTEIIKCLL 240 (384)
Q Consensus 206 ~Ll~~g~~~~~--~-~~g~t~L~~A~~~~~~~~v~~Ll 240 (384)
+|++.|++++. . ..|+||||+|+..|+.++|+.++
T Consensus 171 ~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 171 LSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp CCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred cCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 77888988543 3 66999999999999999987643
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=1.5e-29 Score=204.59 Aligned_cols=153 Identities=25% Similarity=0.370 Sum_probs=129.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 016683 56 KRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGN 135 (384)
Q Consensus 56 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 135 (384)
+.||||.|+..|+.+++++|++..+.+++..+..|.||||+ +..|+.+++++|+++|++++..|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 45899999999999999999988667889999999999999 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 016683 136 IELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQA 210 (384)
Q Consensus 136 ~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 210 (384)
.+++++|+++|++++..+..+ ||||+|+..|+.+++++|++. ++++..+..|.||||+|+..|+.+++++|+++
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 988888888888877666544 888888888888888888877 77777777777777777777777777777653
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=1.9e-29 Score=205.96 Aligned_cols=162 Identities=31% Similarity=0.445 Sum_probs=144.4
Q ss_pred hhhhhHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCC
Q 016683 8 ALAVRERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQD 87 (384)
Q Consensus 8 ~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 87 (384)
+++-++..++|+.|++.|+++++++|++.. +......+..|.||||+|+..|+.+++++|++. |++++..|
T Consensus 2 ~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~ 72 (165)
T 3twr_A 2 AMGNSEADRQLLEAAKAGDVETVKKLCTVQ--------SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKD 72 (165)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHCCTT--------TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred CCCcchhhHHHHHHHHhCCHHHHHHHHHcC--------CCCccccccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccC
Confidence 456678889999999999999999999751 223355677899999999999999999999998 99999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcC
Q 016683 88 EDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHG 166 (384)
Q Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~ 166 (384)
..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..+ ||+++|+. +
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~ 151 (165)
T 3twr_A 73 KGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-G 151 (165)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-T
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-C
Confidence 999999999999999999999999999999999999999999999999999999999999999877666 99999776 9
Q ss_pred CHHHHHHHHhCCC
Q 016683 167 QQEAVKVLLEHHA 179 (384)
Q Consensus 167 ~~~~~~~Ll~~~~ 179 (384)
+.+++++|+++|+
T Consensus 152 ~~~i~~~L~~~gA 164 (165)
T 3twr_A 152 DTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHHTC--
T ss_pred ChHHHHHHhhccc
Confidence 9999999999875
No 77
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.2e-33 Score=259.79 Aligned_cols=238 Identities=17% Similarity=0.163 Sum_probs=168.3
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCC---cCCCCCC
Q 016683 14 RVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDV---DTQDEDG 90 (384)
Q Consensus 14 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---~~~~~~g 90 (384)
..++||.|++.|+.++|++|++... . .......+..|.||||+|+..|+.++|++|++. |+++ +..+.+
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga----~--~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~~- 163 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLT----S--DEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAEN- 163 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC------C--CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHHH-
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCC----c--HHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCCC-
Confidence 3489999999999999999998632 1 111123345678899999999999999999998 7652 222233
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-HcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCC
Q 016683 91 ETPLLHAARQGHTETAKYLFEHGANPTI--PSNLGATALHHSA-GIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQ 167 (384)
Q Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~-~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~ 167 (384)
.||||+|+.+|+.++|++|+++|++++. .|..|.||||+|+ ..|+.+++++|++.|.. +.|||++|+..|+
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~------~~taL~~Aa~~g~ 237 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM------LAYAEIHEFEYGE 237 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH------HHHHHHCTTTTTT
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc------cchHHHHHHHCCC
Confidence 8999999999999999999999999887 8888999999999 99999999999997742 4599999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcC---------------------------CHHHHHHHHHc---------C
Q 016683 168 QEAVKVLLEHHANPNAETEDNITPLLSAVAAG---------------------------SLTCLDLLIQA---------G 211 (384)
Q Consensus 168 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~---------------------------~~~~v~~Ll~~---------g 211 (384)
.+++++|+++|++++..+. +++.|+..| ..+.+++|++. |
T Consensus 238 ~evv~lL~~~ga~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g 313 (376)
T 2aja_A 238 KYVNPFIARHVNRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTA 313 (376)
T ss_dssp TTHHHHHHHHHHHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCC
T ss_pred HHHHHHHHhcCcccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccC
Confidence 9999999998876543321 222222222 34556666653 3
Q ss_pred CCccccCCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCC
Q 016683 212 ANANIVAGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPL 275 (384)
Q Consensus 212 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 275 (384)
++++ .+.||||+|+..|+.+++++|++.| ..++..|+|++.+|..+|+.++++.-+++
T Consensus 314 ~~~n---~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (376)
T 2aja_A 314 TIPG---DANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGRLDLRAVALEH 371 (376)
T ss_dssp SSTT---CCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC----------------------
T ss_pred CCCC---CccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhccccccccccccHHHHHHHH
Confidence 3333 4789999999999999999999864 56677899999999999999998876544
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=8.8e-29 Score=200.01 Aligned_cols=152 Identities=28% Similarity=0.462 Sum_probs=108.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCH
Q 016683 90 GETPLLHAARQGHTETAKYLFEH-GANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQ 168 (384)
Q Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~ 168 (384)
+.||||.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll------------------------- 55 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELL------------------------- 55 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHH-------------------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHH-------------------------
Confidence 34666677777777777666666 23666666666666665 5555555555544
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCC
Q 016683 169 EAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPN 247 (384)
Q Consensus 169 ~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 247 (384)
+.|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|+||||+|+..|+.+++++|++. ++++
T Consensus 56 -------~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~ 127 (156)
T 1bd8_A 56 -------KQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH 127 (156)
T ss_dssp -------HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT
T ss_pred -------HCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC
Confidence 555555555666777777777777777777777777777665 5678888888888888888888888 8888
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHhhcCC
Q 016683 248 VTDEDGQKPIQVAAARGNREAVEILFPL 275 (384)
Q Consensus 248 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 275 (384)
.+|..|.||||+|+..|+.+++++|+++
T Consensus 128 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 128 RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 8888888888888888888888888754
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.7e-30 Score=225.40 Aligned_cols=184 Identities=20% Similarity=0.269 Sum_probs=100.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 016683 55 NKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIG 134 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 134 (384)
.|.||||.|+..|+.++++.|+++ |++++.. ..|.||||.|+..|+.++|++|++.|++++..|..|.||||+|+.
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~-- 79 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAH-GMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVC-- 79 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHH--
T ss_pred cccccCchhhhhhhHHHHHHHhcc-CCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH--
Confidence 355555555555555555555554 5555432 445555555555555555555555555555555555555555554
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q 016683 135 NIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANA 214 (384)
Q Consensus 135 ~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~ 214 (384)
.|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|+++
T Consensus 80 ------------------------------~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 80 ------------------------------AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129 (239)
T ss_dssp ------------------------------HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ------------------------------cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 45555555555555666666667777777777777777777777777777
Q ss_pred ccc-CCCc-hHHHHH--HhhCCHHHHHHHHHCCCCCCCC---------CCCCCcHHHHHHHcCCHHHHHhhcC
Q 016683 215 NIV-AGGA-TPLHIA--ADIGSTEIIKCLLKAGADPNVT---------DEDGQKPIQVAAARGNREAVEILFP 274 (384)
Q Consensus 215 ~~~-~~g~-t~L~~A--~~~~~~~~v~~Ll~~ga~~~~~---------~~~g~t~l~~A~~~~~~~~v~~Ll~ 274 (384)
+.. ..|. ||||+| +..|+.+++++|+++|++++.. +..+.++++++...|. +++.|..
T Consensus 130 ~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~ 200 (239)
T 1ycs_B 130 FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHR 200 (239)
T ss_dssp TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCC
T ss_pred ceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEe
Confidence 665 3343 888888 6778888888888888877765 6678899988888886 3444443
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=8.2e-30 Score=221.17 Aligned_cols=134 Identities=23% Similarity=0.277 Sum_probs=117.1
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 016683 53 DANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAG 132 (384)
Q Consensus 53 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 132 (384)
+..|.||||.|+..|+.+++++|++. |++++..|..|.||||+|+..|+.++|++|+++|++++..|..|.||||+|+.
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 112 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYE-VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAAS 112 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTST-TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 46789999999999999999999987 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCC-C-CHhHHH--HHcCCHHHHHHHHhCCCCCCCCCCC
Q 016683 133 IGNIELLTYLLSKGAEVDSESDA-G-TPLIWA--AGHGQQEAVKVLLEHHANPNAETED 187 (384)
Q Consensus 133 ~~~~~~~~~Ll~~~~~~~~~~~~-~-~~l~~A--~~~~~~~~~~~Ll~~~~~~~~~~~~ 187 (384)
.|+.+++++|+++|++++..+.. + ||+|+| +..|+.+++++|++.|++++..+..
T Consensus 113 ~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~ 171 (239)
T 1ycs_B 113 CNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG 171 (239)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred cCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence 99999999999999888766543 3 888887 6777888888888887777665443
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=2.4e-27 Score=186.98 Aligned_cols=133 Identities=23% Similarity=0.249 Sum_probs=78.7
Q ss_pred CCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-C-C
Q 016683 80 KLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDA-G-T 157 (384)
Q Consensus 80 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~-~ 157 (384)
+++++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+. |+.+++++|+++|++++..+.. + |
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 34556666666666666666666666666666666666666666666666666 6666666665555555544433 2 5
Q ss_pred HhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 016683 158 PLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGAN 213 (384)
Q Consensus 158 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~ 213 (384)
|||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|+|
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 55555555555555555555555555555555665555555555555555555543
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=2.1e-27 Score=191.95 Aligned_cols=143 Identities=22% Similarity=0.294 Sum_probs=108.2
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc-HHH
Q 016683 50 DIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGAT-ALH 128 (384)
Q Consensus 50 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t-~L~ 128 (384)
...+..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+ .|+.+++++|+++|++++..|..|.| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 34567789999999999999999999987 8999999999999999985 88999999999999999999999998 999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 016683 129 HSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLS 194 (384)
Q Consensus 129 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 194 (384)
+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++..+..|.||.+.
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 9999888888888888888887766554 88888888888888888888888888888888777653
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=6.4e-27 Score=189.10 Aligned_cols=144 Identities=26% Similarity=0.416 Sum_probs=88.8
Q ss_pred cCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHH
Q 016683 84 DTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAA 163 (384)
Q Consensus 84 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~ 163 (384)
+..+..|.||||+|+..|+.++|++|+++|++++..|..|.||||+|+ .
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~------------------------------ 54 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-M------------------------------ 54 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-T------------------------------
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-c------------------------------
Confidence 344556677777777777777777777777776666666666665542 4
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHH
Q 016683 164 GHGQQEAVKVLLEHHANPNAETEDNIT-PLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLK 241 (384)
Q Consensus 164 ~~~~~~~~~~Ll~~~~~~~~~~~~g~t-~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~ 241 (384)
|+.+++++|+++|++++..+..|.| |||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|++
T Consensus 55 --~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~ 132 (156)
T 1bi7_B 55 --GSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 132 (156)
T ss_dssp --TCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred --CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHH
Confidence 4455555555555566666667777 777777777788888888888777766 668888888888888888888888
Q ss_pred CCCCCCCCCCCCCcHHHHH
Q 016683 242 AGADPNVTDEDGQKPIQVA 260 (384)
Q Consensus 242 ~ga~~~~~~~~g~t~l~~A 260 (384)
+|++++.++..|.||.+-+
T Consensus 133 ~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 133 AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CC-----------------
T ss_pred cCCCCCccCcCcCcccccC
Confidence 8888888888888887643
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=1.4e-26 Score=182.59 Aligned_cols=119 Identities=34% Similarity=0.438 Sum_probs=72.6
Q ss_pred CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CC-CchHHHHHHhhCCHH
Q 016683 157 TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AG-GATPLHIAADIGSTE 234 (384)
Q Consensus 157 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~-g~t~L~~A~~~~~~~ 234 (384)
||||+|+..|+.+++++|++.|++++..+..|.||||+|+. ++.+++++|+++|++++.. .. |+||||+|+..|+.+
T Consensus 14 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~ 92 (136)
T 1d9s_A 14 AGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD 92 (136)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 44444555555555555555555555555556666666666 6666666666666666555 34 566666666666666
Q ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCC
Q 016683 235 IIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLT 276 (384)
Q Consensus 235 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 276 (384)
++++|+++|++++.+|..|.||||+|+..++.+++++|++++
T Consensus 93 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 93 TLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 666666666666666666666666666666666666666543
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=2.3e-27 Score=197.05 Aligned_cols=160 Identities=16% Similarity=0.139 Sum_probs=116.3
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCH----HHHHHHHHhCCCCCcCCCCC
Q 016683 14 RVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKT----DVCKYLLEELKLDVDTQDED 89 (384)
Q Consensus 14 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~ 89 (384)
..++|+.||+.|+++.++.++.. +.. ...+..|.||||+|+.+|+. +++++|++. |+++|.+|..
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~----~~~------~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~ 74 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK----GYE------DKESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKE 74 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH----SSS------CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTT
T ss_pred cccHHHHHHHcCCHHHHHHHHhc----Ccc------cccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCC
Confidence 34578888888888888888765 211 11235688888888888875 488888887 8888888888
Q ss_pred CCcHHHHHHHcCC------HHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHH
Q 016683 90 GETPLLHAARQGH------TETAKYLFEHGANPTIPSNLGA-TALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWA 162 (384)
Q Consensus 90 g~t~L~~A~~~g~------~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A 162 (384)
|+||||+|+..|+ .+++++|+++|++++.+|..|. ||||+|+..+..+
T Consensus 75 g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~------------------------- 129 (186)
T 3t8k_A 75 GTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDE------------------------- 129 (186)
T ss_dssp CCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCH-------------------------
T ss_pred CCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCCh-------------------------
Confidence 8888888888886 5778888888888888888888 8888887643311
Q ss_pred HHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 016683 163 AGHGQQEAVKVLLE-HHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAG 211 (384)
Q Consensus 163 ~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g 211 (384)
.++.+++++|++ +|++++.+|..|.||||+|+..|+.+++++|.+..
T Consensus 130 --~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 130 --NEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp --HHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred --hhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 122355666666 66666666777777777777777777776666543
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=2.9e-27 Score=196.37 Aligned_cols=119 Identities=11% Similarity=0.145 Sum_probs=86.3
Q ss_pred CHhHHHHHcCCH----HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCC------HHHHHHHHHcCCCcccc-CCCc-hHH
Q 016683 157 TPLIWAAGHGQQ----EAVKVLLEHHANPNAETEDNITPLLSAVAAGS------LTCLDLLIQAGANANIV-AGGA-TPL 224 (384)
Q Consensus 157 ~~l~~A~~~~~~----~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~------~~~v~~Ll~~g~~~~~~-~~g~-t~L 224 (384)
||||+|+..++. +++++|+++|++++.++..|+||||+|+..++ .+++++|+++|++++.. ..|+ |||
T Consensus 40 T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpL 119 (186)
T 3t8k_A 40 NILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVF 119 (186)
T ss_dssp THHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTT
T ss_pred CHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHH
Confidence 444444444442 35666666666666666667777777766665 46677777777777766 5566 777
Q ss_pred HHHHhh-----CCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCC
Q 016683 225 HIAADI-----GSTEIIKCLLK-AGADPNVTDEDGQKPIQVAAARGNREAVEILFPL 275 (384)
Q Consensus 225 ~~A~~~-----~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 275 (384)
|+|+.. ++.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|.++
T Consensus 120 h~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 120 KNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp GGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 777773 34568899998 8999999999999999999999999999888753
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.8e-25 Score=172.34 Aligned_cols=124 Identities=46% Similarity=0.674 Sum_probs=85.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 016683 55 NKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIG 134 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 134 (384)
+|.||||+|+..|+.+++++|++. |.+++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 377788888888888888888776 7777777777788888888888888888888777777777777777777777776
Q ss_pred CHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCC
Q 016683 135 NIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHA 179 (384)
Q Consensus 135 ~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~ 179 (384)
+.+++++|+++|++++..+..+ |||++|+..++.+++++|+++|+
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 6666666666666555443322 55555555555555555555444
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=5.8e-25 Score=170.55 Aligned_cols=125 Identities=43% Similarity=0.627 Sum_probs=99.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCC
Q 016683 89 DGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQ 167 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~ 167 (384)
+|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+..+ ||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48899999999999999999999999999888889999999888888888888888888776655444 77777777777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 016683 168 QEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGAN 213 (384)
Q Consensus 168 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~ 213 (384)
.+++++|+++|++++..+..|.|||++|+..++.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 7777777777777777777777777777777777777777776654
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=2.1e-25 Score=175.78 Aligned_cols=120 Identities=42% Similarity=0.598 Sum_probs=110.9
Q ss_pred CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHH
Q 016683 157 TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEI 235 (384)
Q Consensus 157 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~ 235 (384)
||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.++
T Consensus 16 t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 95 (136)
T 2jab_A 16 KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEI 95 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 8899999999999999999999999999999999999999999999999999999998877 779999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCC
Q 016683 236 IKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLT 276 (384)
Q Consensus 236 v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 276 (384)
+++|+++|++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 96 v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 96 AEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999998653
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=2.9e-25 Score=175.00 Aligned_cols=125 Identities=32% Similarity=0.499 Sum_probs=99.3
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 016683 53 DANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAG 132 (384)
Q Consensus 53 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 132 (384)
...+.||||.|+..|+.+++++|++. |++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 44578889999999999999998887 88888888888999999999999999999999888888888888888888888
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCC
Q 016683 133 IGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHH 178 (384)
Q Consensus 133 ~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~ 178 (384)
.|+.+++++|+++|++++..+..+ |||++|+..|+.+++++|++.|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 888888888887777766555433 6666666666666666666653
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.6e-25 Score=176.67 Aligned_cols=131 Identities=27% Similarity=0.339 Sum_probs=104.3
Q ss_pred CCCCCCCCCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHH
Q 016683 147 AEVDSESDAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLH 225 (384)
Q Consensus 147 ~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~ 225 (384)
+++.....+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||
T Consensus 2 ~d~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 2 IDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLH 81 (137)
T ss_dssp --CCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHH
Confidence 33433333446777777777777777777777777778888888888888888888888888888888876 66899999
Q ss_pred HHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCC
Q 016683 226 IAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTS 277 (384)
Q Consensus 226 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 277 (384)
+|+..|+.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+..+
T Consensus 82 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999999988876543
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=4.6e-25 Score=174.07 Aligned_cols=122 Identities=25% Similarity=0.392 Sum_probs=66.7
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 016683 52 KDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSA 131 (384)
Q Consensus 52 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 131 (384)
+|..|.||||+|+..|+.+++++|++. |++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 455556666666666666666666554 5555555555666666666666666666666665555555555555555555
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHH
Q 016683 132 GIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVL 174 (384)
Q Consensus 132 ~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~L 174 (384)
..|+.+++++|+++|++++..+..+ ||+++|+..+..+++++|
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 5555555555555555444433332 444444444444444333
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=1.1e-24 Score=189.35 Aligned_cols=140 Identities=28% Similarity=0.319 Sum_probs=83.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-C-CCCHhHHHHHcC
Q 016683 89 DGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSES-D-AGTPLIWAAGHG 166 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~-~-~~~~l~~A~~~~ 166 (384)
.|.||||+|+..|+.++|++|++ |++++..|..|.||||+|+..|+.+++++|+++|++++..+ . +.||||+|+..|
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g 122 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 122 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence 34455555555555555555555 45555555555555555555555555555555555554433 2 225566666666
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCchHHHHHHhhCCHHHHHHHHHCCCC
Q 016683 167 QQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIVAGGATPLHIAADIGSTEIIKCLLKAGAD 245 (384)
Q Consensus 167 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 245 (384)
+.+++++|+++|++++..+..|.||||+|+..++. ..+.||||+|+..|+.+++++|++.+.+
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~----------------~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT----------------CCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc----------------cCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 66666666666666666777777777777653222 1267888888888888888888876543
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=1.8e-24 Score=179.45 Aligned_cols=111 Identities=33% Similarity=0.399 Sum_probs=84.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHH
Q 016683 52 KDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPS-NLGATALHHS 130 (384)
Q Consensus 52 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A 130 (384)
.+..|.||||.|+..|+.+++++|++ +.+++.+|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 35578888999988888888888887 88888888888888888888888888888888888888777 6777777777
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHH
Q 016683 131 AGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAG 164 (384)
Q Consensus 131 ~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~ 164 (384)
+..|+.+++++|+++|++++..+..+ ||||+|+.
T Consensus 118 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 118 AGYVRPEVVEALVELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred HhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence 77777666666666666555444333 55555543
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=2.5e-24 Score=178.63 Aligned_cols=139 Identities=28% Similarity=0.321 Sum_probs=126.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC-C-CCCHhHHHHH
Q 016683 87 DEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSES-D-AGTPLIWAAG 164 (384)
Q Consensus 87 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~-~-~~~~l~~A~~ 164 (384)
+..|.||||.|+..|+.+++++|++ |++++..|..|.||||+|+..|+.+++++|+++|++++..+ . +.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578999999999999999999999 99999999999999999999999999999999999998766 4 4499999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCchHHHHHHhhCCHHHHHHHHHC
Q 016683 165 HGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIVAGGATPLHIAADIGSTEIIKCLLKA 242 (384)
Q Consensus 165 ~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 242 (384)
.|+.+++++|+++|++++.+|..|.||||+|+..++. ..+.++|++|+..|+.+++++|.++
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 9999999999999999999999999999999875432 3368999999999999999999864
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=5.2e-24 Score=185.07 Aligned_cols=144 Identities=28% Similarity=0.308 Sum_probs=128.5
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHH
Q 016683 53 DANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPS-NLGATALHHSA 131 (384)
Q Consensus 53 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~ 131 (384)
+..|.||||+|+..|+.+++++|++ +.+++.+|..|.||||+|+..|+.++|++|+++|++++..+ ..|.||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4578999999999999999999998 88999999999999999999999999999999999999888 78999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 016683 132 GIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQA 210 (384)
Q Consensus 132 ~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 210 (384)
..|+.+++++|+++|++++..+..+ ||||+|+..++ ...+.|||++|+..|+.+++++|++.
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 9999999999999999998877665 99999985222 24578999999999999999999987
Q ss_pred CCCcc
Q 016683 211 GANAN 215 (384)
Q Consensus 211 g~~~~ 215 (384)
+.+..
T Consensus 183 ~~~~~ 187 (244)
T 3ui2_A 183 VFEYA 187 (244)
T ss_dssp HEEEE
T ss_pred ccccc
Confidence 65543
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=2.4e-24 Score=184.51 Aligned_cols=139 Identities=24% Similarity=0.308 Sum_probs=104.8
Q ss_pred hhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHH
Q 016683 49 ADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEH-GANPTIPSNLGATAL 127 (384)
Q Consensus 49 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L 127 (384)
.+..+..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.++|++|+++ |++++..|..|.|||
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred ccccccccccccccccccCcHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHH
Confidence 345567788999999999999999999986 888998899999999999999999999999988 899999998899999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 016683 128 HHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDN 188 (384)
Q Consensus 128 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g 188 (384)
|+|+..|+.+++++|+++|++++..+..+ |||++|+..++.++++.|++.++.....+..+
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 98888888888888888888877766554 88888888788888888877777665554443
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=8.7e-24 Score=189.09 Aligned_cols=144 Identities=19% Similarity=0.197 Sum_probs=120.3
Q ss_pred HHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhc-ccCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCCcCCCCCC
Q 016683 15 VQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADI-KDANKRGALHFAARE---GKTDVCKYLLEELKLDVDTQDEDG 90 (384)
Q Consensus 15 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~-~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g 90 (384)
.++|+.|+..|+++.+++|++. |.++...+... .+..|.||||+|+.. |+.+++++|++. |++++.+|..|
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~----g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G 226 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADG 226 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT----TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTC
T ss_pred HHHHhhhhhccCHHHHHHHHhc----CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCC
Confidence 4679999999999999999976 44432211111 578999999999997 899999999998 99999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCH
Q 016683 91 ETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQ 168 (384)
Q Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~ 168 (384)
+||||+|+..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++ .+.||||+|+..|+.
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999999999999998875 345888888877753
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=1.2e-23 Score=162.75 Aligned_cols=110 Identities=26% Similarity=0.332 Sum_probs=90.2
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 016683 53 DANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAG 132 (384)
Q Consensus 53 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 132 (384)
+..|.||||.|+..|+.+++++|++. |.+++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 45678899999999999999998887 88888888889999999999999999999999998888888888888888888
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHH
Q 016683 133 IGNIELLTYLLSKGAEVDSESDAG-TPLIWAA 163 (384)
Q Consensus 133 ~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~ 163 (384)
.|+.+++++|+++|++++..+..+ ||+++|.
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 888888888888877776665544 7777763
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=1.3e-23 Score=162.40 Aligned_cols=112 Identities=28% Similarity=0.403 Sum_probs=101.7
Q ss_pred CCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHH
Q 016683 156 GTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTE 234 (384)
Q Consensus 156 ~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~ 234 (384)
.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|+||||+|+..|+.+
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~ 87 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS 87 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 38899999999999999999999999999999999999999999999999999999999877 78999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 016683 235 IIKCLLKAGADPNVTDEDGQKPIQVAAARGNRE 267 (384)
Q Consensus 235 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 267 (384)
++++|+++|++++.+|..|.||+|+|...+..+
T Consensus 88 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 88 CVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 999999999999999999999999995433333
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.6e-23 Score=187.34 Aligned_cols=143 Identities=23% Similarity=0.247 Sum_probs=117.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCCCC
Q 016683 86 QDEDGETPLLHAARQGHTETAKYLFEHGANPTI------PSNLGATALHHSAGI---GNIELLTYLLSKGAEVDSESDAG 156 (384)
Q Consensus 86 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~ 156 (384)
......++|+.|+..|+.+.|+.|++.|++++. .+..|.||||+|+.. |+.+++++|+++|++++..+..+
T Consensus 147 ~~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G 226 (301)
T 2b0o_E 147 RCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG 226 (301)
T ss_dssp CCC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC
T ss_pred ccCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC
Confidence 344556789999999999999999999998887 588899999999987 88999999999999888776555
Q ss_pred -CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCchHHHHHHhhCCH
Q 016683 157 -TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIVAGGATPLHIAADIGST 233 (384)
Q Consensus 157 -~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~ 233 (384)
||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+++|++ .|.||||+|+.+|+.
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999998876 378999999988864
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1.5e-22 Score=178.97 Aligned_cols=196 Identities=20% Similarity=0.193 Sum_probs=147.2
Q ss_pred CCCCcC-----CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 016683 80 KLDVDT-----QDEDGETPLLHAARQGHTETAKYLFEHGANPTI-PSNLGATALHHSAGIGNIELLTYLLSKGAEVDSES 153 (384)
Q Consensus 80 ~~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~ 153 (384)
|..+.. .|..+.+.++.+...|+..+.+++...-..... ....+....+ ....-..+++...........
T Consensus 51 g~~is~v~s~~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~----~~~fI~aKYl~~~f~~~~~~~ 126 (278)
T 1dcq_A 51 GVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIA----RKDYITAKYMERRYARKKHAD 126 (278)
T ss_dssp CTTTCCEEETTTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHH----HHHHHHHHHTTCTTSCCCSSS
T ss_pred CCCcceeeeeecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHH----HHHHHHHHHHHhhcccccccc
Confidence 665554 567788899999999998877776543222211 1111111111 111111223222211111111
Q ss_pred -CC-CCHhHHHHHcCCHHHHHHHHhCCCCC------CCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCcccc-CCCc
Q 016683 154 -DA-GTPLIWAAGHGQQEAVKVLLEHHANP------NAETEDNITPLLSAVAA---GSLTCLDLLIQAGANANIV-AGGA 221 (384)
Q Consensus 154 -~~-~~~l~~A~~~~~~~~~~~Ll~~~~~~------~~~~~~g~t~l~~A~~~---~~~~~v~~Ll~~g~~~~~~-~~g~ 221 (384)
.. .++|+.|+..|+.+.++.+++.|+++ +..+..|.||||+|+.. |+.+++++|+++|++++.. ..|+
T Consensus 127 ~~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~ 206 (278)
T 1dcq_A 127 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCC
T ss_pred cchhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCC
Confidence 11 17899999999999999999999984 44578899999999999 8999999999999999987 7899
Q ss_pred hHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHhhcCCCCCC
Q 016683 222 TPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNREAVEILFPLTSED 279 (384)
Q Consensus 222 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 279 (384)
||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.++..
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999999999877643
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=2.6e-22 Score=146.94 Aligned_cols=93 Identities=45% Similarity=0.659 Sum_probs=87.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 016683 55 NKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIG 134 (384)
Q Consensus 55 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 134 (384)
+|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 489999999999999999999997 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCC
Q 016683 135 NIELLTYLLSKGAE 148 (384)
Q Consensus 135 ~~~~~~~Ll~~~~~ 148 (384)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999864
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=4e-22 Score=176.29 Aligned_cols=134 Identities=19% Similarity=0.214 Sum_probs=121.5
Q ss_pred hhHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchh-hhcccCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCCcCC
Q 016683 11 VRERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTV-ADIKDANKRGALHFAARE---GKTDVCKYLLEELKLDVDTQ 86 (384)
Q Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~ 86 (384)
......+|+.|+..||++.+++++.. |.++...+ .+..+..|.||||+|+.. |+.+++++|++. |+++|.+
T Consensus 127 ~~~~l~~l~~a~~~~d~~~~~~ll~~----g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~ 201 (278)
T 1dcq_A 127 TAAKLHSLCEAVKTRDIFGLLQAYAD----GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQ 201 (278)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHT----TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCC
T ss_pred cchhhhhhhhHhhhcccHHHHHHHHh----hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCcccc
Confidence 34567899999999999999999987 54444333 566688999999999999 899999999998 9999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 016683 87 DEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEV 149 (384)
Q Consensus 87 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~ 149 (384)
|..|+||||+|+..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|+..
T Consensus 202 d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 202 TGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998753
No 105
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=5.2e-23 Score=176.13 Aligned_cols=131 Identities=18% Similarity=0.232 Sum_probs=59.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCH
Q 016683 89 DGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQ 168 (384)
Q Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~ 168 (384)
.|.||||+|+..|+.++|++|++.|++++..|..|.||||+|+..|+.+++++|++.
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------- 128 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQ----------------------- 128 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTS-----------------------
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcC-----------------------
Confidence 445555555555555555555555555555555555555555444444444444433
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCC
Q 016683 169 EAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPN 247 (384)
Q Consensus 169 ~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 247 (384)
.|++++..+..|.||||+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.++++.|++.|++.+
T Consensus 129 --------~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 129 --------PNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp --------TTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred --------CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 04444444444545555444444444444444444444443 344555555555555555555555554444
Q ss_pred CCC
Q 016683 248 VTD 250 (384)
Q Consensus 248 ~~~ 250 (384)
..+
T Consensus 201 ~~~ 203 (222)
T 3ehr_A 201 LSN 203 (222)
T ss_dssp ---
T ss_pred ccc
Confidence 433
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=1.2e-21 Score=187.72 Aligned_cols=139 Identities=20% Similarity=0.223 Sum_probs=115.6
Q ss_pred HHHHHHHHcCChHHHHHHHHHhhhcCCCccchh-hhcccCCCCcHHHHHHH---cCCHHHHHHHHHhCCCCCcCCCCCCC
Q 016683 16 QQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTV-ADIKDANKRGALHFAAR---EGKTDVCKYLLEELKLDVDTQDEDGE 91 (384)
Q Consensus 16 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~g~ 91 (384)
+.||.|+..|+++.|+.|++. |.+++... ....|..|.||||+||. .|+.+++++|++. |+++|.+|..|+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~----g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~ 208 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGN 208 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT----TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSC
T ss_pred HHHHHHHhccCHHHHHHHHhh----cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCC
Confidence 679999999999999999998 44442211 12237789999999976 9999999999998 999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCHhHHHHH
Q 016683 92 TPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAGTPLIWAAG 164 (384)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~l~~A~~ 164 (384)
||||+|+..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++. +|+|.+..
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-----~~~h~~~~ 276 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-----FPLHVDYS 276 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-----Ccceeecc
Confidence 999999999999999999999999999999999999999999999999999999998765 56776543
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=7.8e-22 Score=180.44 Aligned_cols=158 Identities=23% Similarity=0.245 Sum_probs=67.9
Q ss_pred CCCcHHHHHHHc-CCHHHHHHHHHCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHH
Q 016683 89 DGETPLLHAARQ-GHTETAKYLFEHGANPTIPS--NLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAG 164 (384)
Q Consensus 89 ~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~ 164 (384)
.+.|+||.|+.. |+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+..+ ||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 344555555555 55555555555555555544 445555555555555555555555555555444333 55555555
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc---c-CCCchHHHHHHhhCC--HHHHHH
Q 016683 165 HGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANI---V-AGGATPLHIAADIGS--TEIIKC 238 (384)
Q Consensus 165 ~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~---~-~~g~t~L~~A~~~~~--~~~v~~ 238 (384)
.|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+..+..... . ..+.|+++++..... .+-.+.
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~~~~~ek 357 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEK 357 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------------------
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHhhcCCCHHH
Confidence 5555555555555555555566666666666666666666666655422211 1 335566655544432 233344
Q ss_pred HHHCCCCC
Q 016683 239 LLKAGADP 246 (384)
Q Consensus 239 Ll~~ga~~ 246 (384)
|...+.++
T Consensus 358 l~r~~~~~ 365 (368)
T 3jue_A 358 LSRRSHDL 365 (368)
T ss_dssp --------
T ss_pred HHhcCCCc
Confidence 44444443
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=1.9e-21 Score=177.85 Aligned_cols=147 Identities=24% Similarity=0.280 Sum_probs=107.4
Q ss_pred CCCCCCcHHHHHHHc-CCHHHHHHHHhCCCCCCCCC---CCCCHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 016683 119 PSNLGATALHHSAGI-GNIELLTYLLSKGAEVDSES---DAGTPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLS 194 (384)
Q Consensus 119 ~~~~g~t~L~~A~~~-~~~~~~~~Ll~~~~~~~~~~---~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 194 (384)
.+..+.|+||.|+.. |+.++++.|++.|++++..+ .+.||||+|+..|+.+++++|+++|++++..|..|.||||+
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH 274 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 344567899999988 99999999999998888765 34499999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCC---CCCCCCCCCCCcHHHHHHHcCC
Q 016683 195 AVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAG---ADPNVTDEDGQKPIQVAAARGN 265 (384)
Q Consensus 195 A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~t~l~~A~~~~~ 265 (384)
|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|++.+ ++....+..+.|+++++.....
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHh
Confidence 99999999999999999998877 77899999999999999999998765 3444566678888888776653
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=3.2e-21 Score=184.76 Aligned_cols=133 Identities=23% Similarity=0.182 Sum_probs=106.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhCCCCCcCC------CCCCCcHHHHHHH---cCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 016683 57 RGALHFAAREGKTDVCKYLLEELKLDVDTQ------DEDGETPLLHAAR---QGHTETAKYLFEHGANPTIPSNLGATAL 127 (384)
Q Consensus 57 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~g~t~L~~A~~---~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 127 (384)
.+.||.|+..|+.++++.|++. |+++|.. +..|.||||+||. .|+.++|++|+++|++++..|..|.|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 3678999999999999999987 8888877 7888999999966 8888999999999999998888899999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 016683 128 HHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAV 196 (384)
Q Consensus 128 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~ 196 (384)
|+|+..|+.+++++|+++|++++..+..+ ||||+|+..|+.+++++|+++|++++. +|+|.+.
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 99999999999999999988888777655 888888888888888888888888765 4555544
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=3.5e-21 Score=140.85 Aligned_cols=90 Identities=42% Similarity=0.666 Sum_probs=70.9
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Q 016683 188 NITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVAAARGNR 266 (384)
Q Consensus 188 g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 266 (384)
|.||||+|+..|+.+++++|++.|++++.. ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 677888888888888888888888777766 6678888888888888888888888888888888888888888888888
Q ss_pred HHHHhhcCCCC
Q 016683 267 EAVEILFPLTS 277 (384)
Q Consensus 267 ~~v~~Ll~~~~ 277 (384)
+++++|++.+.
T Consensus 82 ~~~~~Ll~~ga 92 (93)
T 1n0q_A 82 EVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 88888876653
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=2.4e-21 Score=147.73 Aligned_cols=104 Identities=35% Similarity=0.481 Sum_probs=82.8
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 016683 51 IKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHS 130 (384)
Q Consensus 51 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 130 (384)
.+|.+|.||||+|+..|+.+++++|++. |++++..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 4577788888888888888888888876 888888888888888888888888888888888888888888888888888
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCCC
Q 016683 131 AGIGNIELLTYLLSKGAEVDSESDA 155 (384)
Q Consensus 131 ~~~~~~~~~~~Ll~~~~~~~~~~~~ 155 (384)
+..|+.+++++|+++|++++..+..
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~ 107 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWG 107 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCC
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCcc
Confidence 8877777777777777776654443
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=1.4e-20 Score=143.35 Aligned_cols=107 Identities=38% Similarity=0.516 Sum_probs=85.8
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC-CHhHHHH
Q 016683 85 TQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNIELLTYLLSKGAEVDSESDAG-TPLIWAA 163 (384)
Q Consensus 85 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~l~~A~ 163 (384)
.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..+ |||++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 467888999999999999999999999998888888888888888888888888888888888777665544 7777777
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCH
Q 016683 164 GHGQQEAVKVLLEHHANPNAETEDNITP 191 (384)
Q Consensus 164 ~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 191 (384)
..++.+++++|+++|++++..+..|.+|
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 7777777777777777777777777665
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=4e-19 Score=134.14 Aligned_cols=96 Identities=34% Similarity=0.437 Sum_probs=85.5
Q ss_pred chhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Q 016683 46 KTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAARQGHTETAKYLFEHGANPTIPSNLGAT 125 (384)
Q Consensus 46 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t 125 (384)
+......|.+|.|+||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.|
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 92 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKT 92 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCc
Confidence 344456688999999999999999999999987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHH
Q 016683 126 ALHHSAGIGNIELLTYL 142 (384)
Q Consensus 126 ~L~~A~~~~~~~~~~~L 142 (384)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999986
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=1.5e-18 Score=130.91 Aligned_cols=91 Identities=35% Similarity=0.501 Sum_probs=81.9
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCchHHHHHHhhCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 016683 182 NAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIV-AGGATPLHIAADIGSTEIIKCLLKAGADPNVTDEDGQKPIQVA 260 (384)
Q Consensus 182 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 260 (384)
...+.+|.|+||+|+..|+.+++++|++.|++++.. ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 345677889999999999999999999999998877 7799999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHhh
Q 016683 261 AARGNREAVEIL 272 (384)
Q Consensus 261 ~~~~~~~~v~~L 272 (384)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999999987
No 115
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=83.28 E-value=2.4 Score=31.08 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=30.2
Q ss_pred HHHHHHHchhhHHhhhhHHHHHHHHHHHHHhccCC
Q 016683 333 KAAEAKARGDEAFKQKDYLMAVDAYTQVCYSSVLC 367 (384)
Q Consensus 333 ~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 367 (384)
..+..+.+|+..+++++|.+|+..|++++..+...
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~ 46 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN 46 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 45567889999999999999999999999998543
No 116
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=75.09 E-value=6.8 Score=28.49 Aligned_cols=34 Identities=29% Similarity=0.293 Sum_probs=28.5
Q ss_pred HHHHHHHchhhHHhhhhHHHHHHHHHHHHHhccC
Q 016683 333 KAAEAKARGDEAFKQKDYLMAVDAYTQVCYSSVL 366 (384)
Q Consensus 333 ~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 366 (384)
.....+.-|+..+++++|.+|+..|++++..++.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~ 40 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS 40 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3444567899999999999999999999998843
No 117
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=71.97 E-value=5.1 Score=31.04 Aligned_cols=36 Identities=14% Similarity=-0.040 Sum_probs=32.5
Q ss_pred HHHHHHHHHchhhHHhhhhHHHHHHHHHHHHHhccC
Q 016683 331 KKKAAEAKARGDEAFKQKDYLMAVDAYTQVCYSSVL 366 (384)
Q Consensus 331 ~~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 366 (384)
.....+++..|+..++.++|.+|+..|.++|..+..
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~ 43 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT 43 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC
Confidence 346778899999999999999999999999999966
No 118
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=69.84 E-value=5.7 Score=30.14 Aligned_cols=33 Identities=36% Similarity=0.543 Sum_probs=29.6
Q ss_pred HHHHHHHHHchhhHHhhhhHHHHHHHHHHHHHh
Q 016683 331 KKKAAEAKARGDEAFKQKDYLMAVDAYTQVCYS 363 (384)
Q Consensus 331 ~~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~ 363 (384)
.+....++..|+..++.++|..|+..|++++..
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~ 40 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTR 40 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 356677889999999999999999999999987
No 119
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=65.30 E-value=28 Score=27.37 Aligned_cols=133 Identities=17% Similarity=0.123 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCC
Q 016683 12 RERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGE 91 (384)
Q Consensus 12 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 91 (384)
++....|-.|+..|+++....+.+.+.. +. .-.+.=..|...|++++++....+ ..|..+
T Consensus 6 ~D~~~rF~LAL~lg~l~~A~e~a~~l~~------~~-------~Wk~Lg~~AL~~gn~~lAe~cy~~------~~D~~~- 65 (177)
T 3mkq_B 6 QDPHIRFDLALEYGNLDAALDEAKKLND------SI-------TWERLIQEALAQGNASLAEMIYQT------QHSFDK- 65 (177)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHCC------HH-------HHHHHHHHHHHTTCHHHHHHHHHH------TTCHHH-
T ss_pred CChHHHHHHHHhcCCHHHHHHHHHHhCC------HH-------HHHHHHHHHHHcCChHHHHHHHHH------hCCHHH-
Confidence 3456778899999999999988876321 00 111234467889999999999887 223222
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHHhCCCCCCCCCCCCCHhHHHHHcCCHHH
Q 016683 92 TPLLHAARQGHTETAKYLFEHGANPTIPSNLGATALHHSAGIGNI-ELLTYLLSKGAEVDSESDAGTPLIWAAGHGQQEA 170 (384)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~~~~~~~~~~~~~~l~~A~~~~~~~~ 170 (384)
.+.+....|+.+-++.|.+.. ....+-..+++.+...|++ +++++|.+.|-- .-+...|-.+|..++
T Consensus 66 -L~~Ly~~tg~~e~L~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~-------~eA~~~A~t~g~~~~ 133 (177)
T 3mkq_B 66 -LSFLYLVTGDVNKLSKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSL-------PLAYAVAKANGDEAA 133 (177)
T ss_dssp -HHHHHHHHTCHHHHHHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH-------HHHHHHHHHTTCHHH
T ss_pred -HHHHHHHhCCHHHHHHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh-------HHHHHHHHHcCcHHH
Confidence 355555678877777665420 1112234567777777876 467777765421 144566777788887
Q ss_pred HHHHHh
Q 016683 171 VKVLLE 176 (384)
Q Consensus 171 ~~~Ll~ 176 (384)
.+.+++
T Consensus 134 a~~~~~ 139 (177)
T 3mkq_B 134 ASAFLE 139 (177)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777764
No 120
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=53.02 E-value=12 Score=20.81 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHh
Q 016683 13 ERVQQFLNAACTGNLDLLKKIAKQL 37 (384)
Q Consensus 13 ~~~~~l~~A~~~g~~~~v~~ll~~~ 37 (384)
..-+.+.-||..||++.++.|-..+
T Consensus 12 aiEQqiyvA~seGd~etv~~Le~QL 36 (40)
T 1gp8_A 12 AIRKQMDAAASKGDVETYRKLKAKL 36 (40)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3445678889999999999886653
No 121
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=52.34 E-value=26 Score=24.74 Aligned_cols=33 Identities=36% Similarity=0.478 Sum_probs=23.0
Q ss_pred HHHHHHchhhHHhhhhHHHHHHHHHHHHHhccC
Q 016683 334 AAEAKARGDEAFKQKDYLMAVDAYTQVCYSSVL 366 (384)
Q Consensus 334 ~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 366 (384)
.......|...+..++|..|+..|++++..+..
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 36 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE 36 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 344556677777777888888888877777643
No 122
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=51.65 E-value=29 Score=23.37 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=26.9
Q ss_pred HHHHHHHHHHchhhHHhhhhHHHHHHHHHHHHHhc
Q 016683 330 IKKKAAEAKARGDEAFKQKDYLMAVDAYTQVCYSS 364 (384)
Q Consensus 330 ~~~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~ 364 (384)
...++.++-.+.-+.-+.++|.+|...|.++++..
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 49 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEGNAEEAITNYKKAIEVL 49 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 34555666667777889999999999999988754
No 123
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=47.67 E-value=58 Score=25.51 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=63.6
Q ss_pred HHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcCCCCCCCcHHHHHHH
Q 016683 20 NAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDTQDEDGETPLLHAAR 99 (384)
Q Consensus 20 ~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 99 (384)
.|...|++++++.+..+.. | -...+.+....|+.+-++.+-+. -....+-+.+++.+..
T Consensus 43 ~AL~~gn~~lAe~cy~~~~--------------D--~~~L~~Ly~~tg~~e~L~kla~i-----A~~~g~~n~af~~~l~ 101 (177)
T 3mkq_B 43 EALAQGNASLAEMIYQTQH--------------S--FDKLSFLYLVTGDVNKLSKMQNI-----AQTREDFGSMLLNTFY 101 (177)
T ss_dssp HHHHTTCHHHHHHHHHHTT--------------C--HHHHHHHHHHHTCHHHHHHHHHH-----HHHTTCHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHhC--------------C--HHHHHHHHHHhCCHHHHHHHHHH-----HHHCccHHHHHHHHHH
Confidence 4557799999999998722 2 22345555667888877776543 1122344567888888
Q ss_pred cCCH-HHHHHHHHCCCCCCCCCCCCCc--HHHHHHHcCCHHHHHHHHhC
Q 016683 100 QGHT-ETAKYLFEHGANPTIPSNLGAT--ALHHSAGIGNIELLTYLLSK 145 (384)
Q Consensus 100 ~g~~-~~v~~Ll~~g~~~~~~~~~g~t--~L~~A~~~~~~~~~~~Ll~~ 145 (384)
.|++ +++++|.+. |+. +..+|-.+|..++.+.+++.
T Consensus 102 lGdv~~~i~lL~~~----------~r~~eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 102 NNSTKERSSIFAEG----------GSLPLAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HTCHHHHHHHHHHT----------TCHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHC----------CChHHHHHHHHHcCcHHHHHHHHHH
Confidence 8886 477888775 333 34567778899888887753
No 124
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=41.42 E-value=44 Score=22.40 Aligned_cols=33 Identities=15% Similarity=-0.033 Sum_probs=24.7
Q ss_pred HHHHHHHHchhhHHhhhhHHHHHHHHHHHHHhc
Q 016683 332 KKAAEAKARGDEAFKQKDYLMAVDAYTQVCYSS 364 (384)
Q Consensus 332 ~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~ 364 (384)
.++.++-.+.-+.-+.++|.+|...|.++++..
T Consensus 9 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 41 (83)
T 2v6y_A 9 DMARKYAILAVKADKEGKVEDAITYYKKAIEVL 41 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 344555566677788899999999999987754
No 125
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=40.18 E-value=45 Score=24.11 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=24.6
Q ss_pred HHHHHHHHchhhHHhhhhHHHHHHHHHHHHHhc
Q 016683 332 KKAAEAKARGDEAFKQKDYLMAVDAYTQVCYSS 364 (384)
Q Consensus 332 ~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~ 364 (384)
.++.++-.+.-+.-..++|.+|+..|.++++.-
T Consensus 16 ~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l 48 (117)
T 2cpt_A 16 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYF 48 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 445555555667778899999999999988753
No 126
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=39.32 E-value=27 Score=32.61 Aligned_cols=110 Identities=17% Similarity=0.154 Sum_probs=53.4
Q ss_pred HHHHHHH-HcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHc-CC-------------HHHHHHHHHhCC
Q 016683 16 QQFLNAA-CTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAARE-GK-------------TDVCKYLLEELK 80 (384)
Q Consensus 16 ~~l~~A~-~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~-g~-------------~~~v~~Ll~~~~ 80 (384)
..++.++ +.|+++....+++...+.|..++.. ..+.|..|+.. +. .++++.+... |
T Consensus 30 ~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~--------tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~-G 100 (501)
T 4g26_A 30 KQKLDMCSKKGDVLEALRLYDEARRNGVQLSQY--------HYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD-K 100 (501)
T ss_dssp HHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHH--------HHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHh--------HHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh-C
Confidence 3344444 6699999999988876655443211 12233334332 21 2344444444 5
Q ss_pred CCCcCCCCCCCcHHHHHHHcCCHHHHHHH----HHCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 016683 81 LDVDTQDEDGETPLLHAARQGHTETAKYL----FEHGANPTIPSNLGATALHHSAGIGNIEL 138 (384)
Q Consensus 81 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~L----l~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 138 (384)
..+|.. .-++.+...+..|+.+-+..+ .+.|..++... -.+.+...+..|+.+-
T Consensus 101 ~~Pd~~--tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~ 158 (501)
T 4g26_A 101 VVPNEA--TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADK 158 (501)
T ss_dssp CCCCHH--HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHH
T ss_pred CCCCHH--HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHH
Confidence 444322 122345556666766543333 34555554321 1233444455666543
No 127
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=38.52 E-value=51 Score=22.25 Aligned_cols=31 Identities=23% Similarity=0.112 Sum_probs=23.1
Q ss_pred HHHHHHHchhhHHhhhhHHHHHHHHHHHHHh
Q 016683 333 KAAEAKARGDEAFKQKDYLMAVDAYTQVCYS 363 (384)
Q Consensus 333 ~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~ 363 (384)
...++-.+.-+.-..++|.+|+..|.++++.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3444555566677888999999999998765
No 128
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=37.60 E-value=38 Score=30.10 Aligned_cols=92 Identities=10% Similarity=-0.019 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHhhhcCCCccchhhhcccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCCcC--CCCCC
Q 016683 13 ERVQQFLNAACTGNLDLLKKIAKQLDDQGKGLSKTVADIKDANKRGALHFAAREGKTDVCKYLLEELKLDVDT--QDEDG 90 (384)
Q Consensus 13 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~g 90 (384)
.+.+-+-.+...++.+..+.+++.+.+ ....-..|..|+..+......+..+....+++.....+-. .+..|
T Consensus 41 ~gsR~lQ~~l~~~~~~~~~~I~~el~~------~~~~L~~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G 114 (369)
T 3k49_A 41 HGSRFIQRELATSPASEKEVIFNEIRD------DAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYA 114 (369)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHGG------GHHHHHHSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTH
T ss_pred cchHHHHHHhccCCHHHHHHHHHHHHH------HHHHHhhCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhh
Confidence 344455666677888888888877543 2223457889999999999999988887777763322111 23445
Q ss_pred CcHHHHHHHcCCHHHHHHHH
Q 016683 91 ETPLLHAARQGHTETAKYLF 110 (384)
Q Consensus 91 ~t~L~~A~~~g~~~~v~~Ll 110 (384)
...+.-+......+-...++
T Consensus 115 ~rVlQk~le~~~~~q~~~ii 134 (369)
T 3k49_A 115 CRVIQKALEYIDSNQRIELV 134 (369)
T ss_dssp HHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHH
Confidence 55555555555444333333
No 129
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=36.66 E-value=56 Score=21.87 Aligned_cols=31 Identities=19% Similarity=0.051 Sum_probs=23.1
Q ss_pred HHHHHHHchhhHHhhhhHHHHHHHHHHHHHh
Q 016683 333 KAAEAKARGDEAFKQKDYLMAVDAYTQVCYS 363 (384)
Q Consensus 333 ~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~ 363 (384)
+...+-.+.-+.-..++|.+|+..|.++++.
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4444455556677889999999999998875
No 130
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=33.24 E-value=67 Score=22.00 Aligned_cols=32 Identities=19% Similarity=0.073 Sum_probs=23.6
Q ss_pred HHHHHHHchhhHHhhhhHHHHHHHHHHHHHhc
Q 016683 333 KAAEAKARGDEAFKQKDYLMAVDAYTQVCYSS 364 (384)
Q Consensus 333 ~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~ 364 (384)
++.++-.+.-+.-..++|.+|+..|.++++.-
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l 45 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDML 45 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 44445555566778899999999999987754
No 131
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=33.21 E-value=89 Score=20.76 Aligned_cols=26 Identities=35% Similarity=0.488 Sum_probs=15.4
Q ss_pred HchhhHHhhhhHHHHHHHHHHHHHhc
Q 016683 339 ARGDEAFKQKDYLMAVDAYTQVCYSS 364 (384)
Q Consensus 339 ~~~~~~~~~~~~~~a~~~~~~~~~~~ 364 (384)
..|...+..++|.+|+..|.+++..+
T Consensus 9 ~~g~~~~~~~~~~~A~~~~~~al~~~ 34 (111)
T 2l6j_A 9 EQGNSLFKQGLYREAVHCYDQLITAQ 34 (111)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 34455556666666666666666555
No 132
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=32.25 E-value=56 Score=22.42 Aligned_cols=27 Identities=19% Similarity=0.103 Sum_probs=23.3
Q ss_pred HHchhhHHhhhhHHHHHHHHHHHHHhc
Q 016683 338 KARGDEAFKQKDYLMAVDAYTQVCYSS 364 (384)
Q Consensus 338 k~~~~~~~~~~~~~~a~~~~~~~~~~~ 364 (384)
-.-|.-.+..++|..|+.+|.+|+...
T Consensus 9 ~~lG~~~~~~~~y~~A~~W~~~Al~~~ 35 (104)
T 2v5f_A 9 FELGKVAYTEADYYHTELWMEQALRQL 35 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHhh
Confidence 345788899999999999999998864
No 133
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=32.15 E-value=1.2e+02 Score=23.27 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHchhhHHhhhhHHHHHHHHHHHHHhccC
Q 016683 329 EIKKKAAEAKARGDEAFKQKDYLMAVDAYTQVCYSSVL 366 (384)
Q Consensus 329 ~~~~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 366 (384)
+..+........|...+..++|..|+..|.+++.....
T Consensus 33 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 70 (198)
T 2fbn_A 33 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH 70 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 33445566778899999999999999999999986543
No 134
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=31.82 E-value=51 Score=24.54 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=23.8
Q ss_pred HHHHHHHchhhHHhhhhHHHHHHHHHHHHHhcc
Q 016683 333 KAAEAKARGDEAFKQKDYLMAVDAYTQVCYSSV 365 (384)
Q Consensus 333 ~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~~ 365 (384)
........|...+..++|..|+..|.+++..+.
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 42 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAP 42 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 344455667777788888888888888877764
No 135
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=25.14 E-value=1.5e+02 Score=26.64 Aligned_cols=62 Identities=15% Similarity=0.175 Sum_probs=43.2
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCchHHHHHHhhCCHHHHHHHHH
Q 016683 162 AAGHGQQEAVKVLLEHHANPNAETEDNITPLLSAVAAGSLTCLDLLIQAGANANIVAGGATPLHIAADIGSTEIIKCLLK 241 (384)
Q Consensus 162 A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 241 (384)
.+..|+...|+..+..|.+++.+ .|.-..+..++ .+ ...-|.|.+|+|++..+-+++-.|+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~----lt~~e~~lln~------------~~--af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQ----LTADEVRLLNR------------PS--AFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCC----CCHHHHHHHCC------------TT--TCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcc----cCHHHHHHhCC------------Cc--ccccCchhhhhhhhhhhhhHHHHhhh
Confidence 34568888888888888877643 34443333322 11 12348999999999999999999986
No 136
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.37 E-value=2.2e+02 Score=25.63 Aligned_cols=22 Identities=14% Similarity=0.095 Sum_probs=15.6
Q ss_pred HHHHcCCHHHHHHHHHhCCCCCc
Q 016683 62 FAAREGKTDVCKYLLEELKLDVD 84 (384)
Q Consensus 62 ~A~~~g~~~~v~~Ll~~~~~~~~ 84 (384)
..+..|+...|+..+.. |-+++
T Consensus 28 ~gv~e~~~~~ve~y~~~-gg~~~ 49 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSS-GGDIA 49 (454)
T ss_dssp HHHHHTCHHHHHHHHTT-TCCTT
T ss_pred HHHHcCChhHHHHHHhc-CCchh
Confidence 44557899999888877 54544
No 137
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=22.51 E-value=2.2e+02 Score=20.40 Aligned_cols=35 Identities=34% Similarity=0.447 Sum_probs=23.1
Q ss_pred HHHHHHHHHchhhHHhhhhHHHHHHHHHHHHHhcc
Q 016683 331 KKKAAEAKARGDEAFKQKDYLMAVDAYTQVCYSSV 365 (384)
Q Consensus 331 ~~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~~ 365 (384)
.+........|...+..++|..|...|.+++..+.
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~ 44 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNP 44 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 34445556666667777777777777777776653
No 138
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.27 E-value=58 Score=22.05 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=24.8
Q ss_pred HchhhHHhhhhHHHHHHHHHHHHHhccC
Q 016683 339 ARGDEAFKQKDYLMAVDAYTQVCYSSVL 366 (384)
Q Consensus 339 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 366 (384)
-.|.-.|..++|..|+..|++.+..+.-
T Consensus 48 ~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 48 LIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 3478899999999999999999998866
No 139
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=21.79 E-value=1.4e+02 Score=26.25 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHHchhhHHhhhhHHHHHHHHHHHHH
Q 016683 327 RPEIKKKAAEAKARGDEAFKQKDYLMAVDAYTQVCY 362 (384)
Q Consensus 327 ~~~~~~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~ 362 (384)
.++.......++..|...++.++|..|+..|.+++.
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~ 251 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLR 251 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 344555666778889999999999999999999997
No 140
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=21.52 E-value=1.5e+02 Score=26.82 Aligned_cols=36 Identities=28% Similarity=0.327 Sum_probs=30.5
Q ss_pred HHHHHHHHchhhHHhhhhHHHHHHHHHHHHHhccCC
Q 016683 332 KKAAEAKARGDEAFKQKDYLMAVDAYTQVCYSSVLC 367 (384)
Q Consensus 332 ~~~~~~k~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 367 (384)
......+..|...++.++|..|+..|.+++......
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~ 301 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEME 301 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc
Confidence 445567788999999999999999999999987554
No 141
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=20.92 E-value=1.5e+02 Score=20.55 Aligned_cols=28 Identities=21% Similarity=0.366 Sum_probs=16.9
Q ss_pred HHchhhHHhhhhHHHHHHHHHHHHHhcc
Q 016683 338 KARGDEAFKQKDYLMAVDAYTQVCYSSV 365 (384)
Q Consensus 338 k~~~~~~~~~~~~~~a~~~~~~~~~~~~ 365 (384)
...|...+..++|..|+..|.+++..+.
T Consensus 13 ~~~g~~~~~~~~~~~A~~~~~~al~~~~ 40 (137)
T 3q49_B 13 KEQGNRLFVGRKYPEAAACYGRAITRNP 40 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHhhCc
Confidence 4445555666666666666666666553
Done!