BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016684
(384 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 151/310 (48%), Gaps = 48/310 (15%)
Query: 73 VVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGV 132
+ K SSDE +EFL SGS + G + ED H CI N D +F+ V
Sbjct: 10 LTTKDSSDESNEFLA---SGSSSMQGWRISQEDAHNCILNFDDQC----------SFFAV 56
Query: 133 FDGHGGTDAALYVRANILRFI-VEDSHFPICVEKAIKSAFVRADYAF------------- 178
+DGHGG + A Y ++ F+ +++ EKA+K AF+ D
Sbjct: 57 YDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLS 116
Query: 179 ADNSSLDIS----SGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSE 234
D++ D SG TA+ AL+ G++L +ANAGD R V+ R G+A+EMS DHKP T E
Sbjct: 117 GDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVE 176
Query: 235 RLRIEKLGG-VVYDGYLNGQLSVARALGDWHMKSPK---GSACPLSAEPXXXXXXXXXXX 290
RIEK GG V DG +NG L+++RA+GD K K +SA P
Sbjct: 177 YQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPED 236
Query: 291 XXXIMGCDGLWDVMSSQGAVTVARKELMLHNDP----ERCSRELVREALKRNT------C 340
++ CDG+W+ M+S+ V ++ + N P + EL L +T C
Sbjct: 237 EFMVLACDGIWNFMTSEQVVQFVQERI---NKPGMKLSKICEELFDHCLAPHTRGDGTGC 293
Query: 341 DNLTVIVICF 350
DN+T I++ F
Sbjct: 294 DNMTAIIVQF 303
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 135/284 (47%), Gaps = 26/284 (9%)
Query: 89 LRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRAN 148
LR G + G + MED H + + L D+ +F+ V+DGH G+ A Y +
Sbjct: 24 LRYGLSSMQGWRVEMEDAHTAVVGIPHGL---EDW----SFFAVYDGHAGSRVANYCSTH 76
Query: 149 ILRFIVEDSHFPIC-------------VEKAIKSAFVRADYAFADNSSLDIS---SGTTA 192
+L I + F V+ I++ F++ D + S L SG+TA
Sbjct: 77 LLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTA 136
Query: 193 LTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNG 252
+ +I +++ N GD RAVL R G+ ++DHKP E+ RI+ GG V +NG
Sbjct: 137 VGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNG 196
Query: 253 QLSVARALGDWHMKSPKG---SACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQGA 309
L+V+RALGD+ K G + +S EP I+ DG+WDVMS++
Sbjct: 197 SLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEEL 256
Query: 310 VTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPD 353
+ L + +D E +V L + + DN++++++CFS +
Sbjct: 257 CEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNE 300
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 26/295 (8%)
Query: 89 LRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRAN 148
LR G + G + MED H + L L + + F+ V+DGH G+ A Y +
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWS-------FFAVYDGHAGSQVAKYCCEH 74
Query: 149 ILRFIVEDSHFPIC--------VEKAIKSAFVRAD---YAFADNSSLDISSGTTALTALI 197
+L I + F V+ I++ F+ D ++ SG+TA+ LI
Sbjct: 75 LLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLI 134
Query: 198 FGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVA 257
++ N GD R +L R + ++DHKP+ E+ RI+ GG V +NG L+V+
Sbjct: 135 SPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVS 194
Query: 258 RALGDWHMKSPKGSACP---LSAEPXXXXXXXXXXXXX-XIMGCDGLWDVMSSQGAVTVA 313
RALGD+ K G +S EP I+ CDG+WDVM ++
Sbjct: 195 RALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV 254
Query: 314 RKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRS 368
R L + +D E+ E+V L + + DN++VI+ICF P+ P ++ P V++
Sbjct: 255 RSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICF-PNAP---KVSPEAVKKE 305
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 26/295 (8%)
Query: 89 LRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRAN 148
LR G + G + MED H + L L + + F+ V+DGH G+ A Y +
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWS-------FFAVYDGHAGSQVAKYCCEH 74
Query: 149 ILRFIVEDSHFPIC--------VEKAIKSAFVRADY---AFADNSSLDISSGTTALTALI 197
+L I + F V+ I++ F+ D ++ SG+TA+ LI
Sbjct: 75 LLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLI 134
Query: 198 FGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVA 257
++ N GD R +L R + ++DHKP+ E+ RI+ GG V +NG L+V+
Sbjct: 135 SPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVS 194
Query: 258 RALGDWHMKSPKGSACP---LSAEPXXXXXXXXXXXXX-XIMGCDGLWDVMSSQGAVTVA 313
RALGD+ K G +S EP I+ CDG+WDVM ++
Sbjct: 195 RALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV 254
Query: 314 RKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRS 368
R L + +D E+ E+V L + + DN++VI+ICF P+ P ++ P V++
Sbjct: 255 RSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICF-PNAP---KVSPEAVKKE 305
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 45/261 (17%)
Query: 129 FYGVFDGHGGTDAALYVRANILRFIVED--SHFPICVE---------KAIKSAFVRADYA 177
F+GV+DGHGG+ A Y R + + E+ P+ + KA+ ++F+R D
Sbjct: 69 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 128
Query: 178 FADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLR 237
S + G+T++ A++F ++ +AN GD RAVL R A+ +S DHKP+ E R
Sbjct: 129 I--ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAAR 186
Query: 238 IEKLGGVV--YDG-YLNGQLSVARALGDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXI 294
IE GG V ++G + G L+++R++GD ++K S P +P I
Sbjct: 187 IEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP---SIIP---DPEVTAVKRVKEDDCLI 240
Query: 295 MGCDGLWDVMSSQGAVTVARKELMLHN---------------------DPERCS--RELV 331
+ DG+WDVM+ + A +ARK ++L + DP S L
Sbjct: 241 LASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLS 300
Query: 332 REALKRNTCDNLTVIVICFSP 352
+ A++R + DN++V+V+ P
Sbjct: 301 KLAIQRGSKDNISVVVVDLKP 321
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 45/261 (17%)
Query: 129 FYGVFDGHGGTDAALYVRANILRFIVED--SHFPIC---------VEKAIKSAFVRADYA 177
F+GV+DGHGG+ A Y R + + E+ P+ +KA+ ++F+R D
Sbjct: 54 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSE 113
Query: 178 FADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLR 237
S + G+T++ A++F ++ +AN GD RAVL R A+ +S DHKP+ E R
Sbjct: 114 I--ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAAR 171
Query: 238 IEKLGGVV--YDG-YLNGQLSVARALGDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXI 294
IE GG V ++G + G L+++R++GD ++K S P +P I
Sbjct: 172 IEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP---SIIP---DPEVTAVKRVKEDDCLI 225
Query: 295 MGCDGLWDVMSSQGAVTVARKELMLHN---------------------DPERCS--RELV 331
+ DG+WDVM+ + A +ARK ++L + DP S L
Sbjct: 226 LASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLS 285
Query: 332 REALKRNTCDNLTVIVICFSP 352
+ A++R + DN++V+V+ P
Sbjct: 286 KLAIQRGSKDNISVVVVDLKP 306
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 45/261 (17%)
Query: 129 FYGVFDGHGGTDAALYVRANILRFIVED--SHFPICVE---------KAIKSAFVRADYA 177
F+GV+DGHGG+ A Y R + + E+ P+ + KA+ ++F+R D
Sbjct: 57 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 116
Query: 178 FADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLR 237
S + G+T++ A++F ++ +AN GD RAVL R A+ +S DHKP+ E R
Sbjct: 117 I--ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAAR 174
Query: 238 IEKLGGVV--YDG-YLNGQLSVARALGDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXI 294
IE GG V ++G + G L+++R++GD ++K S P +P I
Sbjct: 175 IEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP---SIIP---DPEVTAVKRVKEDDCLI 228
Query: 295 MGCDGLWDVMSSQGAVTVARKELMLHN---------------------DPERCS--RELV 331
+ DG+WDVM+ + A +ARK ++L + DP S L
Sbjct: 229 LASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLS 288
Query: 332 REALKRNTCDNLTVIVICFSP 352
+ A++R + DN++V+V+ P
Sbjct: 289 KLAIQRGSKDNISVVVVDLKP 309
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 42/256 (16%)
Query: 129 FYGVFDGHGGTDAALYVRANILRFIVED-----------SHFPICVEKAIKSAFVRADYA 177
F+GV+DGHGG+ A Y R + + E+ + +KA+ ++F+R D
Sbjct: 61 FFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE 120
Query: 178 FADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLR 237
+ + G+T++ A++F ++ +AN GD RAVL R + +S DHKP+ E R
Sbjct: 121 IETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAAR 180
Query: 238 IEKLGGVV--YDG-YLNGQLSVARALGDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXI 294
IE GG V ++G + G L+++R++GD ++K S P +P I
Sbjct: 181 IEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKP---SVIP---DPEVTSVRRVKEDDCLI 234
Query: 295 MGCDGLWDVMSSQGAVTVARKELMLHN--------------------DPERCS--RELVR 332
+ DGLWDVM+++ +ARK ++L + DP S L +
Sbjct: 235 LASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSK 294
Query: 333 EALKRNTCDNLTVIVI 348
AL++ + DN++V+V+
Sbjct: 295 MALQKGSKDNISVVVV 310
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 55/285 (19%)
Query: 113 LTDHLGTAADFP-VPGAFYGVFDGHGGTDAALYVRANIL--------------------- 150
+ DH G + + G F+GV+DGHGG A Y R +
Sbjct: 51 MGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGE 110
Query: 151 -RFIVEDSHFPIC---VEKAIKSAFVRADYAFADNSSLDISS---GTTALTALIFGRNLI 203
R + D F C V+ I+ RA +D ++S G+TA+ AL+ +++
Sbjct: 111 GRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIV 170
Query: 204 IANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD---GYLNGQLSVARAL 260
++N GD RAVL R A+ +S DHKP+ E RIE GG V + G L+++R++
Sbjct: 171 VSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI 230
Query: 261 GDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQGAVTVARKE-LML 319
GD ++K + EP I+ DGLWDVM++Q +AR+ LM
Sbjct: 231 GDRYLKP------YVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMW 284
Query: 320 HN--------------DP--ERCSRELVREALKRNTCDNLTVIVI 348
H DP + + L AL++ + DN+++IVI
Sbjct: 285 HKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 329
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 55/285 (19%)
Query: 113 LTDHLGTAADFP-VPGAFYGVFDGHGGTDAALYVRANIL--------------------- 150
+ DH G + + G F+GV+DGHGG A Y R +
Sbjct: 50 MGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGE 109
Query: 151 -RFIVEDSHFPIC---VEKAIKSAFVRADYAFADNSSLDISS---GTTALTALIFGRNLI 203
R + D F C V+ I+ RA +D ++S G+TA+ AL+ +++
Sbjct: 110 GRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIV 169
Query: 204 IANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD---GYLNGQLSVARAL 260
++N GD RAVL R A+ +S DHKP+ E RIE GG V + G L+++R++
Sbjct: 170 VSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI 229
Query: 261 GDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQGAVTVARKE-LML 319
GD ++K + EP I+ DGLWDVM++Q +AR+ LM
Sbjct: 230 GDRYLKP------YVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMW 283
Query: 320 HN--------------DP--ERCSRELVREALKRNTCDNLTVIVI 348
H DP + + L AL++ + DN+++IVI
Sbjct: 284 HKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 328
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 55/285 (19%)
Query: 113 LTDHLGTAADFP-VPGAFYGVFDGHGGTDAALYVRANIL--------------------- 150
+ DH G + + G F+GV+DGHGG A Y R +
Sbjct: 47 MGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGE 106
Query: 151 -RFIVEDSHFPIC---VEKAIKSAFVRADYAFADNSSLDISS---GTTALTALIFGRNLI 203
R + D F C V+ I+ RA +D ++S G+TA+ AL+ +++
Sbjct: 107 GRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIV 166
Query: 204 IANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD---GYLNGQLSVARAL 260
++N GD RAVL R A+ +S DHKP+ E RIE GG V + G L+++R++
Sbjct: 167 VSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI 226
Query: 261 GDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQGAVTVARKE-LML 319
GD ++K + EP I+ DGLWDVM++Q +AR+ LM
Sbjct: 227 GDRYLKP------YVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMW 280
Query: 320 HN--------------DP--ERCSRELVREALKRNTCDNLTVIVI 348
H DP + + L AL++ + DN+++IVI
Sbjct: 281 HKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 325
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 55/285 (19%)
Query: 113 LTDHLGTAADFP-VPGAFYGVFDGHGGTDAALYVRANIL--------------------- 150
+ DH G + + G F+GV+DGHGG A Y R +
Sbjct: 60 MGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGE 119
Query: 151 -RFIVEDSHFPIC---VEKAIKSAFVRADYAFADNSSLDISS---GTTALTALIFGRNLI 203
R + D F C V+ I+ RA +D ++S G+TA+ AL+ +++
Sbjct: 120 GRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIV 179
Query: 204 IANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD---GYLNGQLSVARAL 260
++N GD RAVL R A+ +S DHKP+ E RIE GG V + G L+++R++
Sbjct: 180 VSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI 239
Query: 261 GDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQGAVTVARKE-LML 319
GD ++K + EP I+ DGLWDVM++Q +AR+ LM
Sbjct: 240 GDRYLKP------YVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMW 293
Query: 320 HN--------------DP--ERCSRELVREALKRNTCDNLTVIVI 348
H DP + + L AL++ + DN+++IVI
Sbjct: 294 HKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 338
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 55/285 (19%)
Query: 113 LTDHLGTAADFP-VPGAFYGVFDGHGGTDAALYVRANIL--------------------- 150
+ DH G + + G F+GV+DGHGG A Y R +
Sbjct: 53 MGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGE 112
Query: 151 -RFIVEDSHFPIC---VEKAIKSAFVRADYAFADNSSLDISS---GTTALTALIFGRNLI 203
R + D F C V+ I+ RA +D ++S G+TA+ AL+ +++
Sbjct: 113 GRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIV 172
Query: 204 IANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD---GYLNGQLSVARAL 260
++N GD RAVL R A+ +S DHKP+ E RIE GG V + G L+++R++
Sbjct: 173 VSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI 232
Query: 261 GDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQGAVTVARKE-LML 319
GD ++K + EP I+ DGLWDVM++Q +AR+ LM
Sbjct: 233 GDRYLKP------YVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMW 286
Query: 320 HN--------------DP--ERCSRELVREALKRNTCDNLTVIVI 348
H DP + + L AL++ + DN+++IVI
Sbjct: 287 HKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 331
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 55/285 (19%)
Query: 113 LTDHLGTAADFP-VPGAFYGVFDGHGGTDAALYVRANIL--------------------- 150
+ DH G + + G F+GV+DGHGG A Y R +
Sbjct: 36 MGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGE 95
Query: 151 -RFIVEDSHFPIC---VEKAIKSAFVRADYAFADNSSLDISS---GTTALTALIFGRNLI 203
R + D F C V+ I+ RA +D ++S G+TA+ AL+ +++
Sbjct: 96 GRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIV 155
Query: 204 IANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYD---GYLNGQLSVARAL 260
++N GD RAVL R A+ +S DHKP+ E RIE GG V + G L+++R++
Sbjct: 156 VSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI 215
Query: 261 GDWHMKSPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQGAVTVARKE-LML 319
GD ++K + EP I+ DGLWDVM++Q +AR+ LM
Sbjct: 216 GDRYLKP------YVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMW 269
Query: 320 HN--------------DP--ERCSRELVREALKRNTCDNLTVIVI 348
H DP + + L AL++ + DN+++IVI
Sbjct: 270 HKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVI 314
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 92 GSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILR 151
G ++IG ++ ED LTD + ++ V+DGHGG AA + ++ +
Sbjct: 125 GCASQIGKRKENED-RFDFAQLTDEV----------LYFAVYDGHGGPAAADFCHTHMEK 173
Query: 152 FIVEDSHFPICVEKAIKSAFVRADYAFADNSSLD-----ISSGTTALTALIF-GRNLIIA 205
I++ +E + AF+ D AF+ ++ L ++SGTTA AL+ G L++A
Sbjct: 174 CIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVA 233
Query: 206 NAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVY-----DGYLNGQLSVARAL 260
+ GD RA+L R+G+ ++++ DH P E+ RI+K GG V ++NG+L++ R++
Sbjct: 234 SVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSI 293
Query: 261 GDWHMKSPKGSACPLSAEPXXXXXXXXXXXXX-XIMGCDGLWDVMSSQGAVTVARKELML 319
GD +K+ + AEP ++ DG+ +++SQ +
Sbjct: 294 GDLDLKT-----SGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ---- 344
Query: 320 HNDPERCSRELVREALKRNTCDNLTVIVICF 350
+DP + + +A++ T DN T +V+ F
Sbjct: 345 CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 375
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 92 GSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILR 151
G ++IG ++ ED LTD + ++ V+DGHGG AA + ++ +
Sbjct: 11 GCASQIGKRKENEDR-FDFAQLTDEV----------LYFAVYDGHGGPAAADFCHTHMEK 59
Query: 152 FIVEDSHFPICVEKAIKSAFVRADYAFADNSSLD-----ISSGTTALTALIF-GRNLIIA 205
I++ +E + AF+ D AF+ ++ L ++SGTTA AL+ G L++A
Sbjct: 60 CIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVA 119
Query: 206 NAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVY-----DGYLNGQLSVARAL 260
+ GD RA+L R+G+ ++++ DH P E+ RI+K GG V ++NG+L++ R++
Sbjct: 120 SVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSI 179
Query: 261 GDWHMKSPKGSACPLSAEPXXXXXXXXXX-XXXXIMGCDGLWDVMSSQGAVTVARKELML 319
GD +K+ + AEP ++ DG+ +++SQ +
Sbjct: 180 GDLDLKTS-----GVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ---- 230
Query: 320 HNDPERCSRELVREALKRNTCDNLTVIVICF 350
+DP + + +A++ T DN T +V+ F
Sbjct: 231 CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPF 261
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 124/320 (38%), Gaps = 75/320 (23%)
Query: 87 PVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPG----AFYGVFDGHGGTDAA 142
P + +IG +++ ED L VPG AF+GVFDG G A+
Sbjct: 20 PAFDAAIFTDIGGRKHQEDRFTLCPQL-----------VPGRDDCAFFGVFDGTVGDFAS 68
Query: 143 LYVRANILRFIVE--------------------DSHFPICVEKAIKSAFVRADYAFA--- 179
V+ ++ ++ D P +++A+ + AD
Sbjct: 69 ENVKDLVVPQLISSPAWQEVTEXLRSDVPATEVDEKLPQLLDQAVDDXYKNADNELVKXC 128
Query: 180 DNSSLDISSGTTALTALIFGRNLIIANAGDCRAVLGRR---GRAIE-MSKDHKPNCTSER 235
+ + D +S +T++TA++ + + + GD R G G E ++ DHKP+ E+
Sbjct: 129 EQLNKDYAS-STSVTAVLAKGFVAVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDXPHEK 187
Query: 236 LRIEKLGGVVYDGYLNG-----------------------QLSVARALGDWHMKSPKGSA 272
LRI + GG V YL+ QL +RA G +K
Sbjct: 188 LRIXRNGGSVE--YLHNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKX----- 240
Query: 273 CPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRE--L 330
LS +P I+ DGLWDV S+ AV +A + +P + E L
Sbjct: 241 YGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEIAXQARQEGRNPAQALVEXTL 300
Query: 331 VREALKRNTCDNLTVIVICF 350
+ + + DN+T + F
Sbjct: 301 AEQQSRNQSADNITAXTVFF 320
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 83/216 (38%), Gaps = 53/216 (24%)
Query: 161 ICVEKAIKSAFVRADY------------AFADNSSLDIS-SGTTALTALIFGRNLIIANA 207
I V++A+ +AF R D +F + L ++ SG TA A + G +L +AN
Sbjct: 159 IDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANT 218
Query: 208 GDCRAVLGRRGR-----AIEMSKDHKPNCTS--ERLRIE----KLGGVVYDGYLNGQLSV 256
GD RA+LG + A+ +S DH ERL++E + VV L G L
Sbjct: 219 GDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMP 278
Query: 257 ARALGDWHMKS-------------------------PKGSACP--LSAEPXXXXXXXXXX 289
RA GD K P P L+AEP
Sbjct: 279 FRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQ 338
Query: 290 XXXXIMGCDGLWDVMSSQGAVTVARKEL--MLHNDP 323
++ DGLW+ M Q V + + L M H P
Sbjct: 339 DKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQP 374
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 83/216 (38%), Gaps = 53/216 (24%)
Query: 161 ICVEKAIKSAFVRADY------------AFADNSSLDIS-SGTTALTALIFGRNLIIANA 207
I V++A+ +AF R D +F + L ++ SG TA A + G +L +AN
Sbjct: 159 IDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANT 218
Query: 208 GDCRAVLGRRGR-----AIEMSKDHKPNCTSE--RLRIE----KLGGVVYDGYLNGQLSV 256
GD RA+LG + A+ +S DH E RL++E + VV L G L
Sbjct: 219 GDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMP 278
Query: 257 ARALGDWHMKS-------------------------PKGSACP--LSAEPXXXXXXXXXX 289
RA GD K P P L+AEP
Sbjct: 279 FRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQ 338
Query: 290 XXXXIMGCDGLWDVMSSQGAVTVARKEL--MLHNDP 323
++ DGLW+ M Q V + + L M H P
Sbjct: 339 DKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQP 374
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 24/169 (14%)
Query: 199 GRNLIIA-NAGDCRAVLGRR-GRAIEMSKDHKPNCTSERLRIEKLGGVV--YD-GYLNGQ 253
G L+ A N GD RA L G +SKDHKPN +E RIEK GG V +D ++G
Sbjct: 171 GSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGV 230
Query: 254 LSVARALGDWHMK--------SPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMS 305
L+++RA GD K K A P ++ CDG+++
Sbjct: 231 LALSRAFGDSDFKXNPNLPPEEQKVIAVP------DVRQFYALSSDLLLLACDGVYEPSG 284
Query: 306 SQGA----VTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICF 350
A +TVA + D E + + A N+ DN++V ++ F
Sbjct: 285 XDWAYVRDLTVAEXQRS-KGDLEEVAARVXDYAYDXNSQDNISVXLVAF 332
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 186 ISSGTTALTALIFGRNLIIANAGDCRAVLGRRGR-----AIEMSKDHKPNCTSERLRIEK 240
+S G++A+ ALI +L + N G+CRA+L + ++S DH E R+ +
Sbjct: 151 LSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFR 210
Query: 241 LG 242
LG
Sbjct: 211 LG 212
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 25/169 (14%)
Query: 189 GTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDG 248
GTT I G N+I A+ GD R + R+G ++ DH + +E ++
Sbjct: 103 GTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDH--SLVNELVKA---------- 150
Query: 249 YLNGQLSVARALGDWH---MKSPKGSACPLSAEPXXXXXXXXXXXXXXIMGCDGLWDVMS 305
GQL+ A + G A P+ EP ++ DGL +++S
Sbjct: 151 ---GQLTEEEAASHPQKNIITQSIGQANPV--EP-DLGVHLLEEGDYLVVNSDGLTNMLS 204
Query: 306 SQGAVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDP 354
+ TV +E L + +++L+ A R DN+TV ++ +
Sbjct: 205 NADIATVLTQEKTL----DDKNQDLITLANHRGGLDNITVALVYVESEA 249
>pdb|2DLU|A Chain A, Solution Structure Of The Second Pdz Domain Of Human Inad-
Like Protein
Length = 111
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 36 NTKQMTSGKPPRHLSVMRQCGSTTRLLAATDLAMDVGVVNKTSS 79
N + MTS + + V+R CG++ R+L A D A D+ V + SS
Sbjct: 70 NVQGMTSEQVAQ---VLRNCGNSVRMLVARDPAGDISVTSGPSS 110
>pdb|1BPO|A Chain A, Clathrin Heavy-Chain Terminal Domain And Linker
pdb|1BPO|B Chain B, Clathrin Heavy-Chain Terminal Domain And Linker
pdb|1BPO|C Chain C, Clathrin Heavy-Chain Terminal Domain And Linker
Length = 494
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 47 RHLSVMRQCGSTTRLLAATDLAMDVGVVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDE 106
R SV Q G T+ LL + +D G +NK S E PVL+ G ++ K ED+
Sbjct: 400 RFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCR--PVLQQGR-KQLLEKWLKEDK 456
Query: 107 HICIDNLTD 115
C + L D
Sbjct: 457 LECSEELGD 465
>pdb|1TXO|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A.
pdb|1TXO|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A
Length = 237
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 185 DISSGTTALTALIF-GRNLIIANAGDCRAVLGRRGRAIEMSKD 226
D+ T LTA++F G L + + GD R L R G +++KD
Sbjct: 90 DLEGXGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKD 132
>pdb|3T4W|A Chain A, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Sulfitobacter Sp
pdb|3T4W|B Chain B, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Sulfitobacter Sp
pdb|3T4W|C Chain C, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Sulfitobacter Sp
pdb|3T4W|D Chain D, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Sulfitobacter Sp
Length = 432
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 62 LAATDLAMDVGVVNKTSSDEKSEFLPVLRSGSCAEIGP 99
+AA A+ + V K+EF PVLRSG+ A + P
Sbjct: 267 MAAVARAVPIPVATGERLTTKAEFAPVLRSGAAAILQP 304
>pdb|1XI4|A Chain A, Clathrin D6 Coat
pdb|1XI4|B Chain B, Clathrin D6 Coat
pdb|1XI4|C Chain C, Clathrin D6 Coat
pdb|1XI4|D Chain D, Clathrin D6 Coat
pdb|1XI4|E Chain E, Clathrin D6 Coat
pdb|1XI4|F Chain F, Clathrin D6 Coat
pdb|1XI4|G Chain G, Clathrin D6 Coat
pdb|1XI4|H Chain H, Clathrin D6 Coat
pdb|1XI4|I Chain I, Clathrin D6 Coat
pdb|1XI5|A Chain A, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|B Chain B, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|C Chain C, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|D Chain D, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|E Chain E, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|F Chain F, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|G Chain G, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|H Chain H, Clathrin D6 Coat With Auxilin J-Domain
pdb|1XI5|I Chain I, Clathrin D6 Coat With Auxilin J-Domain
pdb|3IYV|A Chain A, Clathrin D6 Coat As Full-Length Triskelions
pdb|3IYV|B Chain B, Clathrin D6 Coat As Full-Length Triskelions
pdb|3IYV|C Chain C, Clathrin D6 Coat As Full-Length Triskelions
pdb|3IYV|D Chain D, Clathrin D6 Coat As Full-Length Triskelions
pdb|3IYV|E Chain E, Clathrin D6 Coat As Full-Length Triskelions
pdb|3IYV|F Chain F, Clathrin D6 Coat As Full-Length Triskelions
pdb|3IYV|G Chain G, Clathrin D6 Coat As Full-Length Triskelions
pdb|3IYV|H Chain H, Clathrin D6 Coat As Full-Length Triskelions
pdb|3IYV|I Chain I, Clathrin D6 Coat As Full-Length Triskelions
Length = 1630
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 47 RHLSVMRQCGSTTRLLAATDLAMDVGVVNKTSSDEKSEFLPVLRSGSCAEIGPKQYMEDE 106
R SV Q G T+ LL + +D G +NK S E PVL+ G ++ K ED+
Sbjct: 400 RFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCR--PVLQQGR-KQLLEKWLKEDK 456
Query: 107 HICIDNLTD 115
C + L D
Sbjct: 457 LECSEELGD 465
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 185 DISSGTTALTALIF-GRNLIIANAGDCRAVLGRRGRAIEMSKD 226
D+ T LTA++F G L + + GD R L R G +++KD
Sbjct: 113 DLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKD 155
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,523,567
Number of Sequences: 62578
Number of extensions: 397225
Number of successful extensions: 856
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 788
Number of HSP's gapped (non-prelim): 34
length of query: 384
length of database: 14,973,337
effective HSP length: 101
effective length of query: 283
effective length of database: 8,652,959
effective search space: 2448787397
effective search space used: 2448787397
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)