Query 016684
Match_columns 384
No_of_seqs 266 out of 1784
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 09:04:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016684.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016684hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 6.6E-64 1.4E-68 489.5 37.9 302 82-383 58-362 (365)
2 KOG0697 Protein phosphatase 1B 100.0 8.5E-54 1.8E-58 386.3 23.6 270 83-359 16-299 (379)
3 PTZ00224 protein phosphatase 2 100.0 2.7E-48 5.8E-53 380.9 31.6 252 85-354 18-274 (381)
4 KOG0698 Serine/threonine prote 100.0 2.2E-48 4.8E-53 377.8 30.2 262 90-359 41-312 (330)
5 PF00481 PP2C: Protein phospha 100.0 2.1E-48 4.5E-53 365.8 16.6 247 90-343 1-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 1.9E-44 4.2E-49 339.5 21.2 240 87-354 6-255 (262)
7 KOG0699 Serine/threonine prote 100.0 1.5E-44 3.3E-49 336.6 19.2 186 188-373 330-526 (542)
8 cd00143 PP2Cc Serine/threonine 100.0 2E-39 4.3E-44 302.6 29.5 245 89-350 1-254 (254)
9 smart00332 PP2Cc Serine/threon 100.0 9.3E-39 2E-43 299.0 29.1 244 87-348 4-255 (255)
10 PRK14559 putative protein seri 100.0 2.1E-39 4.6E-44 334.5 25.1 252 87-355 373-639 (645)
11 KOG0700 Protein phosphatase 2C 100.0 5E-36 1.1E-40 286.4 19.6 215 125-339 97-379 (390)
12 KOG1323 Serine/threonine phosp 100.0 2.5E-28 5.5E-33 226.2 21.8 228 125-354 142-490 (493)
13 KOG0618 Serine/threonine phosp 99.9 3.5E-25 7.5E-30 228.9 15.5 249 82-352 515-773 (1081)
14 KOG1379 Serine/threonine prote 99.9 3.8E-23 8.2E-28 192.0 21.6 201 101-350 89-330 (330)
15 PF13672 PP2C_2: Protein phosp 99.8 1.7E-19 3.6E-24 164.6 15.7 178 94-316 3-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 2E-17 4.3E-22 148.7 21.8 175 101-335 15-192 (193)
17 TIGR02865 spore_II_E stage II 99.6 1.3E-14 2.9E-19 155.0 21.9 193 97-350 561-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 2.4E-12 5.3E-17 115.3 19.9 178 125-351 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.2 0.00027 5.9E-09 70.1 21.6 175 126-351 174-366 (367)
20 PRK10693 response regulator of 72.7 44 0.00096 32.0 11.0 51 167-220 207-259 (303)
21 COG3700 AphA Acid phosphatase 34.3 57 0.0012 29.0 3.9 48 291-338 72-130 (237)
22 PF09436 DUF2016: Domain of un 30.1 25 0.00054 26.3 0.8 32 275-307 11-44 (72)
23 PRK15322 invasion protein OrgB 28.0 2E+02 0.0044 26.0 6.3 51 285-336 143-194 (210)
24 PF06783 UPF0239: Uncharacteri 24.0 38 0.00082 26.1 0.9 10 1-10 1-10 (85)
25 COG1539 FolB Dihydroneopterin 22.5 4.3E+02 0.0093 21.7 7.0 62 295-358 43-106 (121)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=6.6e-64 Score=489.46 Aligned_cols=302 Identities=61% Similarity=1.014 Sum_probs=268.8
Q ss_pred ccCCCCceEEEEeeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChh
Q 016684 82 KSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPI 161 (384)
Q Consensus 82 ~~~~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~ 161 (384)
...++|++++|.++++|.|++|||++++..++....+..........||||||||||+.+|++|++++.+.|.+...+..
T Consensus 58 ~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~ 137 (365)
T PLN03145 58 DTEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPR 137 (365)
T ss_pred hhhccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccch
Confidence 55788999999999999999999999887765333222211123458999999999999999999999999988766666
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCC--CCCCCccEEEEEEeCCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHHHHH
Q 016684 162 CVEKAIKSAFVRADYAFADNSSL--DISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIE 239 (384)
Q Consensus 162 ~~~~~l~~a~~~~d~~i~~~~~~--~~~~GtT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~Ri~ 239 (384)
.++++|.++|.++|+.+.+.... ...||||++++++.++++|+|||||||+|++++|++++||+||+|.++.|++||+
T Consensus 138 ~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~ 217 (365)
T PLN03145 138 EIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIE 217 (365)
T ss_pred hHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHH
Confidence 78899999999999999764332 2349999999999999999999999999999999999999999999999999999
Q ss_pred HcCCeEEeceecCccccccccCCccccCCCCCC-CCccccceeEEEEecCCCeEEEEecCCCCCCCChHHHHHHHHHHhh
Q 016684 240 KLGGVVYDGYLNGQLSVARALGDWHMKSPKGSA-CPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELM 318 (384)
Q Consensus 240 ~~gg~v~~~~~~G~l~ltRalGd~~~k~~~~~~-~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~ 318 (384)
+.||.+..++.+|.+.+||+|||+.+|..+... .+++++|++..+.+.++|+|||||||||||+|++++++++++..+.
T Consensus 218 ~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~ 297 (365)
T PLN03145 218 ASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQ 297 (365)
T ss_pred HcCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999887643222 2478899999999999999999999999999999999999988777
Q ss_pred cCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCCCCCCCCCCCCCccCHhhHHHHHhhhcC
Q 016684 319 LHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIEMPPSRVRRSISAEGLNVLKGVLDG 383 (384)
Q Consensus 319 ~~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (384)
...+|+++|+.|++.|+.+++.||+|||||+|+..++|....++++++|++|+|||.+|+++|++
T Consensus 298 ~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (365)
T PLN03145 298 EHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQRSISAEGLRELQSFLDS 362 (365)
T ss_pred cCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCccccccccccccccCHHHHHHHHHhhhc
Confidence 77799999999999999999999999999999999999999999999999999999999999986
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-54 Score=386.32 Aligned_cols=270 Identities=33% Similarity=0.557 Sum_probs=241.8
Q ss_pred cCCCCceEEEEeeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChh-
Q 016684 83 SEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPI- 161 (384)
Q Consensus 83 ~~~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~- 161 (384)
.+.--.++||.+|++|||-+|||+|.....+.+.+ .+++||||||||.|++.|.+|++++++.|.+...+..
T Consensus 16 ~G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l-------~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~ 88 (379)
T KOG0697|consen 16 EGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPL-------EDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGM 88 (379)
T ss_pred cCcCCceeeeeccccchhhhhhhhhhhhhcCCCCc-------cCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhh
Confidence 34456789999999999999999998766553332 6889999999999999999999999999987654443
Q ss_pred -------hHHHHHHHHHHHHHHHHHhcCCC---CCCCCccEEEEEEeCCEEEEEEcCCccEEEeecCeeEeccCCCCCCC
Q 016684 162 -------CVEKAIKSAFVRADYAFADNSSL---DISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNC 231 (384)
Q Consensus 162 -------~~~~~l~~a~~~~d~~i~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~ 231 (384)
..++-|+..|.++|+.+...... ..++|||++++++....+|++|+||||++++|+|+++.-|.||+|.+
T Consensus 89 ~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~ 168 (379)
T KOG0697|consen 89 TKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYL 168 (379)
T ss_pred ccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCC
Confidence 68888999999999988754332 23499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeEEeceecCccccccccCCccccCCCCC---CCCccccceeEEEEecCCCeEEEEecCCCCCCCChHH
Q 016684 232 TSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGS---ACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQG 308 (384)
Q Consensus 232 ~~E~~Ri~~~gg~v~~~~~~G~l~ltRalGd~~~k~~~~~---~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~e 308 (384)
|.|++||+.+||.|.-.|+||.|+++|||||+.||...+. .+.|+++|+|..+...+.|+||||+|||+||+++++|
T Consensus 169 p~EkeRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtnee 248 (379)
T KOG0697|consen 169 PKEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEE 248 (379)
T ss_pred hHHHHHHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHH
Confidence 9999999999999999999999999999999999987653 4679999999999999889999999999999999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCCCCC
Q 016684 309 AVTVARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIE 359 (384)
Q Consensus 309 i~~ii~~~l~~~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~~~~~~~~~~ 359 (384)
+.++++..+..+.|++.+|..+++..+-+|++||+|+|+|+|...|.+.++
T Consensus 249 lcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~~e 299 (379)
T KOG0697|consen 249 LCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVSIE 299 (379)
T ss_pred HHHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCCHH
Confidence 999999999889999999999999999999999999999999877665443
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=2.7e-48 Score=380.86 Aligned_cols=252 Identities=26% Similarity=0.458 Sum_probs=217.5
Q ss_pred CCCceEEEEeeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChhhHH
Q 016684 85 FLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVE 164 (384)
Q Consensus 85 ~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~~~~ 164 (384)
....+.+|+.+.+|.|++|||++++... ....+|||||||||..+|+++++.+.+.+.+..... ..
T Consensus 18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~--~~ 83 (381)
T PTZ00224 18 GNSIFRCASACVNGYRESMEDAHLLYLT------------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPM--TD 83 (381)
T ss_pred CCccEEEEEEeCCCCCCCCCCeeEeccC------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccc--cH
Confidence 4557889999999999999999876432 244699999999999999999999998876542221 23
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEe-CCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHHHHHHcCC
Q 016684 165 KAIKSAFVRADYAFADNSSLDISSGTTALTALIF-GRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGG 243 (384)
Q Consensus 165 ~~l~~a~~~~d~~i~~~~~~~~~~GtT~~~~~i~-~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg 243 (384)
+.|+++|..+|+.+.+... .+|||++++++. +.+++||||||||+|++|+|++++||+||++.++.|+.||.+.||
T Consensus 84 ~~l~~a~~~~d~~i~~~~~---~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg 160 (381)
T PTZ00224 84 ERMEELCLEIDEEWMDSGR---EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGG 160 (381)
T ss_pred HHHHHHHHHHHHHHHhccc---CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccC
Confidence 4589999999999986543 469999988886 579999999999999999999999999999999999999999999
Q ss_pred eEEeceecCccccccccCCccccCCCC---CCCCccccceeEEEEecCCCeEEEEecCCCCC-CCChHHHHHHHHHHhhc
Q 016684 244 VVYDGYLNGQLSVARALGDWHMKSPKG---SACPLSAEPELQETLLTEDDEFLIMGCDGLWD-VMSSQGAVTVARKELML 319 (384)
Q Consensus 244 ~v~~~~~~G~l~ltRalGd~~~k~~~~---~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd-~l~~~ei~~ii~~~l~~ 319 (384)
.+..++++|.+++||+||+..+|.... ..+.++++|++..+.+.++| ||||||||||| +++++++.+++.+.+..
T Consensus 161 ~v~~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~~ 239 (381)
T PTZ00224 161 RVVSNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEVVAFVKEQLET 239 (381)
T ss_pred EeccccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHHHHHHHHHHhc
Confidence 999999999999999999988876532 12356789999999998776 89999999999 89999999999876655
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCC
Q 016684 320 HNDPERCSRELVREALKRNTCDNLTVIVICFSPDP 354 (384)
Q Consensus 320 ~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~~~~~ 354 (384)
..+++.+|+.|++.|+.+|+.||||||||+|...+
T Consensus 240 ~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 240 CDDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGA 274 (381)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCC
Confidence 67899999999999999999999999999998764
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-48 Score=377.80 Aligned_cols=262 Identities=39% Similarity=0.611 Sum_probs=226.5
Q ss_pred EEEEeeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChh---hHHHH
Q 016684 90 RSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPI---CVEKA 166 (384)
Q Consensus 90 ~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~---~~~~~ 166 (384)
..+.++.+|.|..|||++.....+....... .....+|||||||||+.+|+|+.+++...+.+...+.. ..+.+
T Consensus 41 ~~~~~~~~~~r~~med~~~~~~~~~~~~~~~---~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a 117 (330)
T KOG0698|consen 41 LGSLLSIRGRRRKMEDRHVQLPDFLEEDVGG---EQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDA 117 (330)
T ss_pred ceEEEecCCCCCccCcceeecccccccccCC---CCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHH
Confidence 3455588999999999998877653211110 12578999999999999999999999999998766655 48999
Q ss_pred HHHHHH-HHHHHHHhcCCCCCCCCccEEEEEEeCC-EEEEEEcCCccEEEeecC-eeEeccCCCCCCCHHHHHHHHHcCC
Q 016684 167 IKSAFV-RADYAFADNSSLDISSGTTALTALIFGR-NLIIANAGDCRAVLGRRG-RAIEMSKDHKPNCTSERLRIEKLGG 243 (384)
Q Consensus 167 l~~a~~-~~d~~i~~~~~~~~~~GtT~~~~~i~~~-~l~vanvGDSRayl~r~g-~~~~LT~DH~~~~~~E~~Ri~~~gg 243 (384)
++++|. ++|..+.+.......+|||++++++.++ +||+||+|||||+++++| ++++||.||+|..+.|+.||+++||
T Consensus 118 ~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG 197 (330)
T KOG0698|consen 118 LRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGG 197 (330)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCC
Confidence 999999 6999998752223468889888888855 999999999999999866 8999999999999999999999999
Q ss_pred eEEe----ceecCccccccccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCCCChHHHHHHHHHHhhc
Q 016684 244 VVYD----GYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELML 319 (384)
Q Consensus 244 ~v~~----~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~~ 319 (384)
+|.. .|++|.|+++|+|||+.+|. ++++++|++....+...|+||||+||||||+++++|++++++..+..
T Consensus 198 ~v~~~~~~~Rv~G~LavsRa~GD~~~k~-----~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~ 272 (330)
T KOG0698|consen 198 RVSNWGGVWRVNGVLAVSRAFGDVELKS-----QGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELAS 272 (330)
T ss_pred EEEEcCCcceEeceEEEeeecCCHHhcC-----CcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhc
Confidence 9974 39999999999999999995 26999999999999999999999999999999999999999997655
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCCCCC
Q 016684 320 HNDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRIE 359 (384)
Q Consensus 320 ~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~~~~~~~~~~ 359 (384)
..++..+++.|...|+.+++.||+|||||+|.+.+.....
T Consensus 273 ~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~~~~ 312 (330)
T KOG0698|consen 273 ISSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPKSPSS 312 (330)
T ss_pred cccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCccccccC
Confidence 6789999999999999999999999999999988755444
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=2.1e-48 Score=365.83 Aligned_cols=247 Identities=42% Similarity=0.683 Sum_probs=206.2
Q ss_pred EEEEeeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChh--hHHHHH
Q 016684 90 RSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPI--CVEKAI 167 (384)
Q Consensus 90 ~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~--~~~~~l 167 (384)
.+|+.+.+|.|.+|||++++..++....+ .....+|+|||||||..+++++++.+...+.+...... .+.++|
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~-----~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al 75 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSG-----NDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEAL 75 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTT-----EEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCC-----CCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcc
Confidence 47899999999999999999886632111 14668999999999999999999999987776533222 588999
Q ss_pred HHHHHH-HHHHHHhcCC--CCCCCCccEEEEEEeCCEEEEEEcCCccEEEeecCeeE-eccCCCCCCCHHHHHHHHHcCC
Q 016684 168 KSAFVR-ADYAFADNSS--LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAI-EMSKDHKPNCTSERLRIEKLGG 243 (384)
Q Consensus 168 ~~a~~~-~d~~i~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSRayl~r~g~~~-~LT~DH~~~~~~E~~Ri~~~gg 243 (384)
..+|.+ ++..+..... ....+|||++++++.++++|+|||||||+|+++++... +||+||+|.++.|+.||++.||
T Consensus 76 ~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg 155 (254)
T PF00481_consen 76 RQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGG 155 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-
T ss_pred cceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccc
Confidence 999999 8888876211 33469999999999999999999999999999999988 9999999999999999999999
Q ss_pred eEE-eceecCccccccccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCCCChHHHHHHHHHHhhcCCC
Q 016684 244 VVY-DGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHND 322 (384)
Q Consensus 244 ~v~-~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~~~~~ 322 (384)
.+. ..+++|.|++||+|||..+|... +.+++++|++..+.+.++|+|||||||||||+++++|++++++.......+
T Consensus 156 ~v~~~~rv~g~l~~sRalGd~~~k~~~--~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~ 233 (254)
T PF00481_consen 156 RVSENGRVNGVLAVSRALGDFDLKPPG--KPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRS 233 (254)
T ss_dssp GEEETEEETTTBSSSB-EE-GGGTTCT--SSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSH
T ss_pred ccccchhhhhccccccccccccccccc--cceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCc
Confidence 998 78999999999999999999732 347999999999999999999999999999999999999999998654456
Q ss_pred HHHHHHHHHHHHHhCCCCCCe
Q 016684 323 PERCSRELVREALKRNTCDNL 343 (384)
Q Consensus 323 ~~~~a~~Lv~~A~~~gs~DNi 343 (384)
|+.+|+.|++.|+++|+.|||
T Consensus 234 ~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 234 PQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999997
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-44 Score=339.48 Aligned_cols=240 Identities=27% Similarity=0.399 Sum_probs=204.2
Q ss_pred CceEEEEeeecCC-CCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCC----hh
Q 016684 87 PVLRSGSCAEIGP-KQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHF----PI 161 (384)
Q Consensus 87 ~~~~~g~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~----~~ 161 (384)
..+.++..+..|. |.+|||++++..+.... . ..+|+|||||||+.++++|++.+++.|.+.... ..
T Consensus 6 ~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~--------~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~ 76 (262)
T COG0631 6 LSLKVAGLSDVGTVRKHNEDAFLIKPNENGN--------L-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSL 76 (262)
T ss_pred ceeeeeeeccCCCccCCCCcceeeccccCCc--------c-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3455666667665 88899999887632110 2 469999999999999999999999988764211 11
Q ss_pred h--HHHHHHHHHHHHHHHHHhcCC---CCCCCCccEEEEEEeCCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHH
Q 016684 162 C--VEKAIKSAFVRADYAFADNSS---LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERL 236 (384)
Q Consensus 162 ~--~~~~l~~a~~~~d~~i~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~ 236 (384)
. +.+++.+++..+++.+..... ....||||++++++.++++|+|||||||+|++|+|++++||.||++.+..++.
T Consensus 77 ~~~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~ 156 (262)
T COG0631 77 NESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQR 156 (262)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHh
Confidence 1 688999999999999987653 33569999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeceecCccccccccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCCCChHHHHHHHHHH
Q 016684 237 RIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKE 316 (384)
Q Consensus 237 Ri~~~gg~v~~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~ 316 (384)
|+...++.....+.+ ++|||||+.. ...|++....+.++ +|||||||||||.++++++.++++..
T Consensus 157 ~~~~~~~~~~~~~~~---~ltralG~~~-----------~~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~~ 221 (262)
T COG0631 157 GIITPEEARSHPRRN---ALTRALGDFD-----------LLEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKNS 221 (262)
T ss_pred cCCCHHHHHhCccch---hhhhhcCCCc-----------ccceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhcC
Confidence 988887776655544 8999999975 37899999999998 58889999999999999999999963
Q ss_pred hhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCC
Q 016684 317 LMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDP 354 (384)
Q Consensus 317 l~~~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~~~~~ 354 (384)
.+|++++++|++.|+.+++.||+|+|+|.+....
T Consensus 222 ----~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 222 ----ETPQEAADKLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccc
Confidence 6999999999999999999999999999998665
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=336.57 Aligned_cols=186 Identities=39% Similarity=0.611 Sum_probs=164.2
Q ss_pred CCccEEEEEEeCCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHHHHHHcCCeEE-eceecCccccccccCCcccc
Q 016684 188 SGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVY-DGYLNGQLSVARALGDWHMK 266 (384)
Q Consensus 188 ~GtT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~-~~~~~G~l~ltRalGd~~~k 266 (384)
+|||++||++.+++|||||+||||++++|.|+++.++.||+|....|..||.++||.|. ++|+||.|.++|||||+.||
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~GDHaYK 409 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFGDHAYK 409 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhhhhhhh
Confidence 79999999999999999999999999999999999999999999999999999999996 99999999999999999999
Q ss_pred CCCCC---CCCccccceeEEEEecCCCeEEEEecCCCCCCCChHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhC------
Q 016684 267 SPKGS---ACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKR------ 337 (384)
Q Consensus 267 ~~~~~---~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~~~~~~~~~a~~Lv~~A~~~------ 337 (384)
+.... .++|++-|+|....|++.|+|+|++|||||++|+.++++++|+..+.....+..+|++|++..+.-
T Consensus 410 ~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~GDG 489 (542)
T KOG0699|consen 410 KNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDGDG 489 (542)
T ss_pred cccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCCCC
Confidence 87654 367999999999999999999999999999999999999999999988888899999999999874
Q ss_pred CCCCCeEEEEEEcCCC-CCCCCCCCCCCCCCccCHhh
Q 016684 338 NTCDNLTVIVICFSPD-PPPRIEMPPSRVRRSISAEG 373 (384)
Q Consensus 338 gs~DNiTvIvv~~~~~-~~~~~~~~~~~~~~~~~~~~ 373 (384)
.++||+|||+++|++. ..-+|...--+...+.|.++
T Consensus 490 TGCDNMT~ii~~Fkrk~~elqpnq~e~kldq~~sk~~ 526 (542)
T KOG0699|consen 490 TGCDNMTVIITTFKRKSKELQPNQTEDKLDQSASKRC 526 (542)
T ss_pred cCCCcceEEEEEeccchhhcCCcchhhHHHHHHHhhh
Confidence 2689999999999843 22222222334455555544
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2e-39 Score=302.64 Aligned_cols=245 Identities=43% Similarity=0.682 Sum_probs=210.4
Q ss_pred eEEEEeeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCC-----hhhH
Q 016684 89 LRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHF-----PICV 163 (384)
Q Consensus 89 ~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~-----~~~~ 163 (384)
+.++..+.+|.|+.|||++++...... .+..+|+|||||||+..+++|++.+++.+.+.... ...+
T Consensus 1 ~~~~~~~~~g~r~~neD~~~~~~~~~~---------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~ 71 (254)
T cd00143 1 FSAGVSDKGGDRKTNEDAVVIKPNLNN---------EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDI 71 (254)
T ss_pred CceeeecCCCCCCCCcceEEEeccCCC---------CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHH
Confidence 356888899999999999988654210 15689999999999999999999999988764332 4567
Q ss_pred HHHHHHHHHHHHHHHHhcCC---CCCCCCccEEEEEEeCCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHHHHHH
Q 016684 164 EKAIKSAFVRADYAFADNSS---LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEK 240 (384)
Q Consensus 164 ~~~l~~a~~~~d~~i~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~Ri~~ 240 (384)
...|+.+|+++++.+..... ....+|||++++++.++.++++|+||||+|++++++++++|+||++.++.|+.|+..
T Consensus 72 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~ 151 (254)
T cd00143 72 EEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEK 151 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHH
Confidence 88899999999999986543 234699999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEeceecCccccccccCCccccCCCCCCCCccccceeEEEEe-cCCCeEEEEecCCCCCCCChHHHHHHHHHHhhc
Q 016684 241 LGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLL-TEDDEFLIMGCDGLWDVMSSQGAVTVARKELML 319 (384)
Q Consensus 241 ~gg~v~~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l-~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~~ 319 (384)
.++.+......+...+||+||+..+|. ++..+|++..+.+ .++| +|||||||||++++++++.+++......
T Consensus 152 ~~~~~~~~~~~~~~~~t~~lG~~~~~~------~~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l~~~~i~~~~~~~~~~ 224 (254)
T cd00143 152 AGGRVSNGRVPGVLAVTRALGDFDLKP------GVSAEPDVTVVKLTEDDD-FLILASDGLWDVLSNQEAVDIVRSELAK 224 (254)
T ss_pred cCCcEEeCEEcCceeeccccCCccccC------CEEcCCeEEEEEeCCCCc-EEEEECCCCeeccChHHHHHHHHHHhcc
Confidence 999887777788889999999987664 3578999999999 5555 8889999999999999999999886100
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEEEEEEc
Q 016684 320 HNDPERCSRELVREALKRNTCDNLTVIVICF 350 (384)
Q Consensus 320 ~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~ 350 (384)
.+++++|+.|++.|..+++.||+|+|+++|
T Consensus 225 -~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 225 -EDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred -cCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 179999999999999999999999999975
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=9.3e-39 Score=298.99 Aligned_cols=244 Identities=43% Similarity=0.714 Sum_probs=210.6
Q ss_pred CceEEEEeeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCCh----hh
Q 016684 87 PVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFP----IC 162 (384)
Q Consensus 87 ~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~----~~ 162 (384)
..+.+++.+.+|.|..|||++++..... ....+|+|||||||..+++++++.+.+.+.+..... ..
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~~----------~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDLS----------DSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELED 73 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccCC----------CCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhH
Confidence 4567788888899999999988765420 356799999999999999999999999887643322 35
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC---CCCCccEEEEEEeCCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHHHHH
Q 016684 163 VEKAIKSAFVRADYAFADNSSLD---ISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIE 239 (384)
Q Consensus 163 ~~~~l~~a~~~~d~~i~~~~~~~---~~~GtT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~Ri~ 239 (384)
+.+.|++++..+++.+....... ..+|||++++++..++++++|+||||+|++|++++.+||+||++.+..|+.||.
T Consensus 74 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~ 153 (255)
T smart00332 74 VEEALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIE 153 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHH
Confidence 78889999999999998654332 358999999999999999999999999999999999999999999999999999
Q ss_pred HcCCeEEeceecCccccccccCCccccCCCCCCCCccccceeEEEEe-cCCCeEEEEecCCCCCCCChHHHHHHHHHHhh
Q 016684 240 KLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLL-TEDDEFLIMGCDGLWDVMSSQGAVTVARKELM 318 (384)
Q Consensus 240 ~~gg~v~~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l-~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~ 318 (384)
..++.+..++.++...+||++|+..+|. .+..+|++....+ .++| +|||||||||++++++++.+++.+...
T Consensus 154 ~~~~~~~~~~~~~~~~lt~~~g~~~~~~------~i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l~~~~i~~~~~~~~~ 226 (255)
T smart00332 154 AAGGFVINGRVNGVLALSRAIGDFFLKP------YVSAEPDVTVVELTEKDD-FLILASDGLWDVLSNQEVVDIVRKHLS 226 (255)
T ss_pred HcCCEEECCeECCeEecccccCCHhhcC------CeEeeeEEEEEEecCCCc-EEEEECCccccCCCHHHHHHHHHHHhh
Confidence 9999998888888899999999987764 4678999999997 5555 888999999999999999999988631
Q ss_pred cCCCHHHHHHHHHHHHHhCCCCCCeEEEEE
Q 016684 319 LHNDPERCSRELVREALKRNTCDNLTVIVI 348 (384)
Q Consensus 319 ~~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv 348 (384)
. .++.++|+.|++.|..+++.||+|||||
T Consensus 227 ~-~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 227 K-SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred c-CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 1 2689999999999999999999999985
No 10
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=2.1e-39 Score=334.50 Aligned_cols=252 Identities=21% Similarity=0.220 Sum_probs=181.1
Q ss_pred CceEEEEeeecCC-CCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHh----cCCChh
Q 016684 87 PVLRSGSCAEIGP-KQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVE----DSHFPI 161 (384)
Q Consensus 87 ~~~~~g~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~----~~~~~~ 161 (384)
..++++..+++|. |++|||++.+..++...............+|+|||||||+.+|+.||+.+++.|.+ ......
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4578999999997 99999998775432111000000012346899999999999888888777766543 211111
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-----CCCCCCccEEEEEEeCCEEEEEEcCCccEEEe-ecCeeEeccCCCCCCCHHHH
Q 016684 162 CVEKAIKSAFVRADYAFADNSS-----LDISSGTTALTALIFGRNLIIANAGDCRAVLG-RRGRAIEMSKDHKPNCTSER 235 (384)
Q Consensus 162 ~~~~~l~~a~~~~d~~i~~~~~-----~~~~~GtT~~~~~i~~~~l~vanvGDSRayl~-r~g~~~~LT~DH~~~~~~E~ 235 (384)
..++.|+++|..+|+.|.+... ....||||++++++.++++|++||||||+|++ |+|++++||+||++...
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~--- 529 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQR--- 529 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHH---
Confidence 2366799999999999976432 22359999999999999999999999999998 57899999999996533
Q ss_pred HHHHHcCCe--EEeceecCccccccccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCC--CChHHHHH
Q 016684 236 LRIEKLGGV--VYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDV--MSSQGAVT 311 (384)
Q Consensus 236 ~Ri~~~gg~--v~~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~--l~~~ei~~ 311 (384)
+.+.|-. .... ..+...+||+||+...+ ..+|++..+.+.++| +||||||||||. +.. .+.+
T Consensus 530 --lv~~Gi~~~~a~~-~p~~~~LTrALG~~~~~---------~l~Pdi~~~~L~~gD-~lLLCSDGL~D~~~ve~-~~~~ 595 (645)
T PRK14559 530 --EIQRGVEPQIAYA-RPDAYQLTQALGPRDNS---------AIQPDIQFLEIEEDT-LLLLCSDGLSDNDLLET-HWQT 595 (645)
T ss_pred --HHHhCCCHHHHhc-CcccceeeeccCCCCCC---------cccceEEEEEcCCCC-EEEEECCCCCCCcccch-HHHH
Confidence 3333310 0111 13456899999986533 358999999998766 777999999994 443 2222
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCC
Q 016684 312 VARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSPDPP 355 (384)
Q Consensus 312 ii~~~l~~~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~~~~~~ 355 (384)
.+...+....+++++++.|++.|+.+|++||+|||||+++..|.
T Consensus 596 ~l~~il~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~ 639 (645)
T PRK14559 596 HLLPLLSSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQ 639 (645)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCC
Confidence 23232333468999999999999999999999999999975543
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=286.36 Aligned_cols=215 Identities=33% Similarity=0.494 Sum_probs=179.9
Q ss_pred CCceEEEEEcCCChhHHHHHHHHHHHHHHHhc-------------C---------------------CChhhHHHHHHHH
Q 016684 125 VPGAFYGVFDGHGGTDAALYVRANILRFIVED-------------S---------------------HFPICVEKAIKSA 170 (384)
Q Consensus 125 ~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~-------------~---------------------~~~~~~~~~l~~a 170 (384)
..+.|+||||||||.++++++++++..++..+ . .....+.++|.+|
T Consensus 97 ~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~A 176 (390)
T KOG0700|consen 97 NGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKA 176 (390)
T ss_pred CCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHH
Confidence 56789999999999999999999999877621 1 1145678999999
Q ss_pred HHHHHHHHHhcCCC-------CCCCCccEEEEEEeCCEEEEEEcCCccEEEee---cC---eeEeccCCCCCCCHHHHHH
Q 016684 171 FVRADYAFADNSSL-------DISSGTTALTALIFGRNLIIANAGDCRAVLGR---RG---RAIEMSKDHKPNCTSERLR 237 (384)
Q Consensus 171 ~~~~d~~i~~~~~~-------~~~~GtT~~~~~i~~~~l~vanvGDSRayl~r---~g---~~~~LT~DH~~~~~~E~~R 237 (384)
|.++++++...... -..+|+|++++++.+..|||||+|||||+|.+ .| .++|||.||+.++++|++|
T Consensus 177 f~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~R 256 (390)
T KOG0700|consen 177 FEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRR 256 (390)
T ss_pred HHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHH
Confidence 99999999643211 12489999999999999999999999999965 23 5899999999999999999
Q ss_pred HHHcCC----eEEec--eecCccccccccCCccccCCCC---------------CCCCccccceeEEEEecCCCeEEEEe
Q 016684 238 IEKLGG----VVYDG--YLNGQLSVARALGDWHMKSPKG---------------SACPLSAEPELQETLLTEDDEFLIMG 296 (384)
Q Consensus 238 i~~~gg----~v~~~--~~~G~l~ltRalGd~~~k~~~~---------------~~~~v~~~p~i~~~~l~~~d~~LvL~ 296 (384)
|+..+. .+... |+.|.|.+||||||..+|.++- ..+.++++|.|+..+|.+.|+||||+
T Consensus 257 ir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlA 336 (390)
T KOG0700|consen 257 IRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILA 336 (390)
T ss_pred HHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEe
Confidence 999885 33344 9999999999999999998752 24669999999999999999999999
Q ss_pred cCCCCCCCChHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhCCC
Q 016684 297 CDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREALKRNT 339 (384)
Q Consensus 297 SDGlwd~l~~~ei~~ii~~~l~~~~~~~~~a~~Lv~~A~~~gs 339 (384)
|||||++|+++|+++++...+.....-+.+|+.|++.|+.+..
T Consensus 337 SDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~aa 379 (390)
T KOG0700|consen 337 SDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRAA 379 (390)
T ss_pred ccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhhh
Confidence 9999999999999999998653211226789999999987643
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-28 Score=226.15 Aligned_cols=228 Identities=32% Similarity=0.487 Sum_probs=179.2
Q ss_pred CCceEEEEEcCCChhHHHHHHHHHHHHHHHhcC--------------------------------------CC--hhhHH
Q 016684 125 VPGAFYGVFDGHGGTDAALYVRANILRFIVEDS--------------------------------------HF--PICVE 164 (384)
Q Consensus 125 ~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~--------------------------------------~~--~~~~~ 164 (384)
.++++|.+||||.|..+|-.|++.+.+.+.+.. .. ..-+.
T Consensus 142 ~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LVi 221 (493)
T KOG1323|consen 142 ADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVI 221 (493)
T ss_pred CcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhH
Confidence 466899999999999999999988876654310 00 01245
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCCCCCccEEEEEEeCCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHHHHHHcCC
Q 016684 165 KAIKSAFVRADYAFADNSS-LDISSGTTALTALIFGRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGG 243 (384)
Q Consensus 165 ~~l~~a~~~~d~~i~~~~~-~~~~~GtT~~~~~i~~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg 243 (384)
.+|+.||+.+|+.|.+..+ ....+|||+++++.--+++|+||+||||++++|++++++|+++.+|. .||+|++..+=
T Consensus 222 GAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPe--tERqRlQ~Laf 299 (493)
T KOG1323|consen 222 GALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPE--TERQRLQELAF 299 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcH--HHHHHHHHHhh
Confidence 7899999999999986543 33458999999999999999999999999999999999999999974 68999887541
Q ss_pred -------------------------------------eEE------------------eceecCccccccccCCccccCC
Q 016684 244 -------------------------------------VVY------------------DGYLNGQLSVARALGDWHMKSP 268 (384)
Q Consensus 244 -------------------------------------~v~------------------~~~~~G~l~ltRalGd~~~k~~ 268 (384)
+.+ ..|+-+.+.++|.|||.++|..
T Consensus 300 ~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~ 379 (493)
T KOG1323|consen 300 RNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVV 379 (493)
T ss_pred cChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeee
Confidence 000 0123344669999999999987
Q ss_pred CCC---CCCccccceeEEEEecC----CCeEEEEecCCCCCCCChHHHHHHHHHHhhcC--CCH---HHHHHHHHHHHHh
Q 016684 269 KGS---ACPLSAEPELQETLLTE----DDEFLIMGCDGLWDVMSSQGAVTVARKELMLH--NDP---ERCSRELVREALK 336 (384)
Q Consensus 269 ~~~---~~~v~~~p~i~~~~l~~----~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~~~--~~~---~~~a~~Lv~~A~~ 336 (384)
+.+ ++.+++.|+|...+|.+ .|+.+||+||||||+++++++..+++..+... .|| ..+|+.|+..|..
T Consensus 380 dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg 459 (493)
T KOG1323|consen 380 DSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARG 459 (493)
T ss_pred cCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcC
Confidence 754 67899999999999873 45699999999999999999999999987643 345 3577778777644
Q ss_pred -------------CCCCCCeEEEEEEcCCCC
Q 016684 337 -------------RNTCDNLTVIVICFSPDP 354 (384)
Q Consensus 337 -------------~gs~DNiTvIvv~~~~~~ 354 (384)
.|+.|+|||.||-+.-..
T Consensus 460 ~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~ 490 (493)
T KOG1323|consen 460 QQKDRGWRMNNGGLGSGDDISVFVIPLKYCA 490 (493)
T ss_pred ccCCCceeccCCCcCCCCceEEEEEeccCCC
Confidence 257899999999886543
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.93 E-value=3.5e-25 Score=228.92 Aligned_cols=249 Identities=24% Similarity=0.410 Sum_probs=215.0
Q ss_pred ccCCCCceEEEEeeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChh
Q 016684 82 KSEFLPVLRSGSCAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPI 161 (384)
Q Consensus 82 ~~~~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~ 161 (384)
.......|++|++...|.|..+.-+.....++.. .+.+.||++||-+..+...++..++.+++.++.....
T Consensus 515 ~~~n~~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~---------~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~ 585 (1081)
T KOG0618|consen 515 GNVNAFLWTYGVAGVSGQRNKVCSRAVWVENFFL---------NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYG 585 (1081)
T ss_pred cccceeheeeccchhcccccchhhhhhhhhhccc---------CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence 4455677899999999999988776655555432 4668999999999999999999999999988755544
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEeC--------CEEEEEEcCCccEEEeecCeeEeccCCC-CCCCH
Q 016684 162 CVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIFG--------RNLIIANAGDCRAVLGRRGRAIEMSKDH-KPNCT 232 (384)
Q Consensus 162 ~~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~~~~~i~~--------~~l~vanvGDSRayl~r~g~~~~LT~DH-~~~~~ 232 (384)
+-.+.|+.+|...++++...+. .-|..++.+.|.. .++.+||+|+|.++++++|+..++|+-. ...++
T Consensus 586 ~et~~mr~~fl~~~rklg~~g~---~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~ 662 (1081)
T KOG0618|consen 586 NETEQMRNTFLRLNRKLGEEGQ---VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDR 662 (1081)
T ss_pred ChHHHHHHHHHHHhhhhhhhhc---cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCH
Confidence 4455699999999999976554 3455666666654 3689999999999999999999998876 44589
Q ss_pred HHHHHHHHcCCeEE-eceecCccccccccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCCCChHHHHH
Q 016684 233 SERLRIEKLGGVVY-DGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVT 311 (384)
Q Consensus 233 ~E~~Ri~~~gg~v~-~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~ei~~ 311 (384)
+|++||+..+|++. +++++|+...||++|.+.+.+ .+.+.|+|..+.|++.|+|||+++-++|++|+-+++++
T Consensus 663 eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P------~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~ 736 (1081)
T KOG0618|consen 663 EEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFP------HVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVD 736 (1081)
T ss_pred HHHHHHHHhcCeecCCCeeeceeeeeeecccccccc------cccCCCceeeEecccCceEEEEcchHHhhhccHHHHHH
Confidence 99999999999997 899999999999999987765 58899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEcCC
Q 016684 312 VARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSP 352 (384)
Q Consensus 312 ii~~~l~~~~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~~~ 352 (384)
++|+. .+|-.+|++|++.|..+|+.||++|+||++..
T Consensus 737 ~vRn~----~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~ 773 (1081)
T KOG0618|consen 737 AVRNV----EDPLLAAKKLCDLAQSYGCAENVSVLVVRLNH 773 (1081)
T ss_pred HHhcC----CchHHHHHHHHHHHHhcccccCeeEEEEEeec
Confidence 99975 79999999999999999999999999999974
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.91 E-value=3.8e-23 Score=191.99 Aligned_cols=201 Identities=18% Similarity=0.266 Sum_probs=147.8
Q ss_pred CCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhH-----HHHHHHHHH---HHHHHhcCCChhhHHHHHHHHHH
Q 016684 101 QYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTD-----AALYVRANI---LRFIVEDSHFPICVEKAIKSAFV 172 (384)
Q Consensus 101 ~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~-----aa~~as~~~---~~~l~~~~~~~~~~~~~l~~a~~ 172 (384)
+.-||++++..+ ....+.|||||+|||. .+.|..+.+ .+.+.+....+.++...|.+|+.
T Consensus 89 ~~GEDa~Fvss~------------~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~ 156 (330)
T KOG1379|consen 89 KGGEDAWFVSSN------------PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYA 156 (330)
T ss_pred CCCCcceeeccC------------cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHH
Confidence 357999999876 3557999999999987 444444333 33444444445577888887776
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEEEe--CCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHHHHHHcCCeEEecee
Q 016684 173 RADYAFADNSSLDISSGTTALTALIF--GRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYL 250 (384)
Q Consensus 173 ~~d~~i~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~ 250 (384)
+.-+. ....-++|||+++++. +++|++||+|||-..++|+|++++.|..+... .
T Consensus 157 ~l~~~-----~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~-------------------F 212 (330)
T KOG1379|consen 157 ELKSQ-----KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHY-------------------F 212 (330)
T ss_pred HHhhc-----CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheec-------------------c
Confidence 65321 2223478999999998 78999999999999999999999999987521 1
Q ss_pred cCcccc-------ccccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCCCChHHHHHHHHHHhh-cCCC
Q 016684 251 NGQLSV-------ARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELM-LHND 322 (384)
Q Consensus 251 ~G~l~l-------tRalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~-~~~~ 322 (384)
|-.+.| ..+++| ..-..+...+.+.++| +|||+||||||+|.+++|.+++..... ...+
T Consensus 213 N~PyQLs~~p~~~~~~~~d------------~p~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~~~~~ 279 (330)
T KOG1379|consen 213 NTPYQLSSPPEGYSSYISD------------VPDSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDARGNLD 279 (330)
T ss_pred CCceeeccCCccccccccC------------CccccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhcccccc
Confidence 111112 112333 2245678889999998 788999999999999999999987765 4557
Q ss_pred HHHHHHHHHHHHHhC-----------------------CCCCCeEEEEEEc
Q 016684 323 PERCSRELVREALKR-----------------------NTCDNLTVIVICF 350 (384)
Q Consensus 323 ~~~~a~~Lv~~A~~~-----------------------gs~DNiTvIvv~~ 350 (384)
++..|+.|++.|.+. |..|+|||||..+
T Consensus 280 lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 280 LQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 999999999988762 4589999999753
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.82 E-value=1.7e-19 Score=164.62 Aligned_cols=178 Identities=20% Similarity=0.208 Sum_probs=97.8
Q ss_pred eeecCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHH----HHHHHHHHHhcCCChhh--HHHHH
Q 016684 94 CAEIGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYV----RANILRFIVEDSHFPIC--VEKAI 167 (384)
Q Consensus 94 ~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~a----s~~~~~~l~~~~~~~~~--~~~~l 167 (384)
.+++|.++.|||++.+... .+..+++||||+||...++.+ ++.+.+.+......... ....+
T Consensus 3 ~sh~~~~~~nqD~~~~~~~------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~ 70 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALI 70 (212)
T ss_dssp ----TTSSS--EEEEEE-T------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 4788999999999986543 355678999999976655554 44455555544443322 23333
Q ss_pred HHHHHHHHHHH------HhcCCCCCCCCccEEEEEEeCCEEEEEEcCCccEEE-eecCeeEeccCCCCCCCHHHHHHHHH
Q 016684 168 KSAFVRADYAF------ADNSSLDISSGTTALTALIFGRNLIIANAGDCRAVL-GRRGRAIEMSKDHKPNCTSERLRIEK 240 (384)
Q Consensus 168 ~~a~~~~d~~i------~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRayl-~r~g~~~~LT~DH~~~~~~E~~Ri~~ 240 (384)
+.+...+...+ .........++||++++++.++.++++|+||||+|+ .++|++..++.||+ .|..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~----~~~~---- 142 (212)
T PF13672_consen 71 RAIKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHS----GEYP---- 142 (212)
T ss_dssp HHHHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---B----HHHH----
T ss_pred HHHHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCcc----chhh----
Confidence 43333333221 111223345899999999999999999999999965 67999999999996 1111
Q ss_pred cCCeEEeceecCccccccccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCCCChHH-HHHHHHHH
Q 016684 241 LGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQG-AVTVARKE 316 (384)
Q Consensus 241 ~gg~v~~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~e-i~~ii~~~ 316 (384)
..++.+.... .....++..+++.+++ .|+|||||||+.+...+ +..++...
T Consensus 143 --------------~~~~~~~~~~----------~~~~~~~~~~~~~~~d-~ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 143 --------------NQTRSLTGDD----------PEPDVQYGSIPLEEGD-VILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp --------------HCTTSCCHHC----------CCTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH----
T ss_pred --------------hhhhccCccc----------cccCCeEEEEEcCCCC-EEEEECcCccccCCCHHHHHHHhhhc
Confidence 1133333221 1223466667777777 56699999999998765 66666554
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.79 E-value=2e-17 Score=148.70 Aligned_cols=175 Identities=22% Similarity=0.164 Sum_probs=131.2
Q ss_pred CCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHh
Q 016684 101 QYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFAD 180 (384)
Q Consensus 101 ~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~d~~i~~ 180 (384)
...-|.+.+...- ++..+|+|+||||+...|.+++..+...+.+...... .+.+.+..+|+.+..
T Consensus 15 ~~~GD~~~~~~~~-----------~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~l~~ 79 (193)
T smart00331 15 QVGGDFYDVVKLP-----------EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRAIYE 79 (193)
T ss_pred hcCccEEEEEEeC-----------CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHh
Confidence 4467877665431 3468999999999999999998888887765433221 255666777888776
Q ss_pred cCCCCCCCCccEEEEEE--eCCEEEEEEcCCccEEEee-cCeeEeccCCCCCCCHHHHHHHHHcCCeEEeceecCccccc
Q 016684 181 NSSLDISSGTTALTALI--FGRNLIIANAGDCRAVLGR-RGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVA 257 (384)
Q Consensus 181 ~~~~~~~~GtT~~~~~i--~~~~l~vanvGDSRayl~r-~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~G~l~lt 257 (384)
.. ...+++|++++++ ..++++++|+||+|+|+++ ++..++++++.+
T Consensus 80 ~~--~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~----------------------------- 128 (193)
T smart00331 80 NG--EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG----------------------------- 128 (193)
T ss_pred cC--CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC-----------------------------
Confidence 52 2358999999998 6789999999999999999 666666666532
Q ss_pred cccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCCCChHHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Q 016684 258 RALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHNDPERCSRELVREAL 335 (384)
Q Consensus 258 RalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~~~~~~~~~a~~Lv~~A~ 335 (384)
+.+|... ...++...+.+.++| .|+|+|||||+.++.+++.+++.+.. ..+++++++++++.+.
T Consensus 129 ~~lG~~~-----------~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 129 APLGLEP-----------DVEVDVRELTLEPGD-LLLLYTDGLTEARNPERLEELLEELL--GSPPAEIAQRILEELL 192 (193)
T ss_pred ceeeeCC-----------CCcceeEEEeeCCCC-EEEEECCCccccCChHHHHHHHHHhc--CCCHHHHHHHHHHHHh
Confidence 4566432 234677888898988 66699999999999999999998863 3568888888887654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.65 E-value=1.3e-14 Score=155.01 Aligned_cols=193 Identities=17% Similarity=0.131 Sum_probs=137.7
Q ss_pred cCCCCCCCcceeeecccccccCCCCCCCCCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHH
Q 016684 97 IGPKQYMEDEHICIDNLTDHLGTAADFPVPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADY 176 (384)
Q Consensus 97 ~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~d~ 176 (384)
++.+..+.|.+.+...- +...+++|+||+|+...|..++..+.+.+.+......+ ...++..+|+
T Consensus 561 k~g~~vsGD~y~~~~l~-----------~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~lN~ 625 (764)
T TIGR02865 561 KDGELVSGDSYSFGKLS-----------AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKTVNS 625 (764)
T ss_pred CCCCcccCceEEEEEEC-----------CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHH
Confidence 44467789998765431 34468999999997777777777766655432111111 3566677777
Q ss_pred HHHhcCCCCCCCCccEEEEEEe--CCEEEEEEcCCccEEEeecCeeEeccCCCCCCCHHHHHHHHHcCCeEEeceecCcc
Q 016684 177 AFADNSSLDISSGTTALTALIF--GRNLIIANAGDCRAVLGRRGRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQL 254 (384)
Q Consensus 177 ~i~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSRayl~r~g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~G~l 254 (384)
.+..... ..+.+|+.+++++ .+++.++|+|+++.|+.|++++.+++..+-|
T Consensus 626 ~L~~~~~--~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP------------------------- 678 (764)
T TIGR02865 626 ILSLRST--DEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP------------------------- 678 (764)
T ss_pred HHHhCCC--CCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce-------------------------
Confidence 7754422 2478999999885 6789999999999999999998888764431
Q ss_pred ccccccCCccccCCCCCCCCccccceeEEEEecCCCeEEEEecCCCCCCCChHH-----HHHHHHHHhhcCCCHHHHHHH
Q 016684 255 SVARALGDWHMKSPKGSACPLSAEPELQETLLTEDDEFLIMGCDGLWDVMSSQG-----AVTVARKELMLHNDPERCSRE 329 (384)
Q Consensus 255 ~ltRalGd~~~k~~~~~~~~v~~~p~i~~~~l~~~d~~LvL~SDGlwd~l~~~e-----i~~ii~~~l~~~~~~~~~a~~ 329 (384)
+|-.. ..+++....++.++| +|||+||||||..++++ +.+++... ...+|++.++.
T Consensus 679 -----lGil~-----------~~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~--~~~~p~ela~~ 739 (764)
T TIGR02865 679 -----IGILD-----------EVDVELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKVLWLVRKLKET--NTNDPEEIAEY 739 (764)
T ss_pred -----eEecc-----------CCccceEEEEeCCCC-EEEEECCCCCcCCcccccHHHHHHHHHHhc--CCCCHHHHHHH
Confidence 22211 235667788898988 67799999999887533 55555542 23589999999
Q ss_pred HHHHHHhCC---CCCCeEEEEEEc
Q 016684 330 LVREALKRN---TCDNLTVIVICF 350 (384)
Q Consensus 330 Lv~~A~~~g---s~DNiTvIvv~~ 350 (384)
|++.|.... ..||+|++++++
T Consensus 740 Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 740 LLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHhcCCCCCCCeEEEEEEe
Confidence 999997653 479999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.51 E-value=2.4e-12 Score=115.31 Aligned_cols=178 Identities=21% Similarity=0.156 Sum_probs=114.5
Q ss_pred CCceEEEEEcCCChhHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEe--CCEE
Q 016684 125 VPGAFYGVFDGHGGTDAALYVRANILRFIVEDSHFPICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIF--GRNL 202 (384)
Q Consensus 125 ~~~~l~~V~DG~GG~~aa~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~~~~~i~--~~~l 202 (384)
++..+++|+|+.|..-.|.+.+..+...+......... ..+.+..+|+.+....... ...+|++++.+. .+++
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~-~~~~t~~~~~~d~~~~~l 76 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD-NRYATACYAIIDPETGTL 76 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT-STTEEEEEEEEETTTTEE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc-cccceEEEEEecccceEE
Confidence 45678999999996666666665555555432111111 4555566666664333221 367788888865 5689
Q ss_pred EEEEcCCccEEEeec--CeeEeccCCCCCCCHHHHHHHHHcCCeEEeceecCccccccccCCccccCCCCCCCCccccce
Q 016684 203 IIANAGDCRAVLGRR--GRAIEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAEPE 280 (384)
Q Consensus 203 ~vanvGDSRayl~r~--g~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~p~ 280 (384)
+++|+|++++++++. +....+..... .||-.. ...+.
T Consensus 77 ~~~~aG~~~~l~~~~~~~~~~~~~~~~~------------------------------~lG~~~-----------~~~~~ 115 (193)
T PF07228_consen 77 TYANAGHPPPLLLRPGGREIEQLESEGP------------------------------PLGIFE-----------DIDYQ 115 (193)
T ss_dssp EEEEESSSEEEEEETTCTEEEEETCSSB------------------------------BCSSSC-----------TTCEE
T ss_pred EEeCCCCCCEEEEeccccceeecccCcc------------------------------ceeeec-----------ccccc
Confidence 999999999999998 33433333221 244322 24556
Q ss_pred eEEEEecCCCeEEEEecCCCCCCCChH-------HHHHHHHHHhhcCCCHHHHHHHHHHHHHhC---CCCCCeEEEEEEc
Q 016684 281 LQETLLTEDDEFLIMGCDGLWDVMSSQ-------GAVTVARKELMLHNDPERCSRELVREALKR---NTCDNLTVIVICF 350 (384)
Q Consensus 281 i~~~~l~~~d~~LvL~SDGlwd~l~~~-------ei~~ii~~~l~~~~~~~~~a~~Lv~~A~~~---gs~DNiTvIvv~~ 350 (384)
...+.+.++| .|+|+||||+|....+ .+.+++.+. ...++++.++.|++.+... ...||+|++++++
T Consensus 116 ~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~ 192 (193)
T PF07228_consen 116 EQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDEN--RGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRR 192 (193)
T ss_dssp EEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE
T ss_pred ceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEE
Confidence 6778888888 6679999999998544 334555533 2357899999999988763 4789999999987
Q ss_pred C
Q 016684 351 S 351 (384)
Q Consensus 351 ~ 351 (384)
+
T Consensus 193 ~ 193 (193)
T PF07228_consen 193 Q 193 (193)
T ss_dssp -
T ss_pred C
Confidence 4
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.22 E-value=0.00027 Score=70.05 Aligned_cols=175 Identities=16% Similarity=0.136 Sum_probs=113.2
Q ss_pred CceEEEEEcCCC-hhHHHHHHHHHHHHHHHhcCCC-hhhHHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEEe--CCE
Q 016684 126 PGAFYGVFDGHG-GTDAALYVRANILRFIVEDSHF-PICVEKAIKSAFVRADYAFADNSSLDISSGTTALTALIF--GRN 201 (384)
Q Consensus 126 ~~~l~~V~DG~G-G~~aa~~as~~~~~~l~~~~~~-~~~~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~~~~~i~--~~~ 201 (384)
....++|.|..| |-.+|-. +......+...... ... -.+.+..+|+.+....... +=+|+...+++ .+.
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~----p~~~l~~~n~~~~~~~~~~--~f~T~~~~~~d~~~~~ 246 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLD----PADVLETLNRVLKQNLEED--MFVTLFLGVYDLDSGE 246 (367)
T ss_pred cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCC----HHHHHHHHHHHHHhcccCC--cEEEEEEEEEeccCCE
Confidence 457889999999 5555444 33332222211111 111 2345556666666554432 67787777775 568
Q ss_pred EEEEEcCCccEEEeecCee---EeccCCCCCCCHHHHHHHHHcCCeEEeceecCccccccccCCccccCCCCCCCCcccc
Q 016684 202 LIIANAGDCRAVLGRRGRA---IEMSKDHKPNCTSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKSPKGSACPLSAE 278 (384)
Q Consensus 202 l~vanvGDSRayl~r~g~~---~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~G~l~ltRalGd~~~k~~~~~~~~v~~~ 278 (384)
+.++|+|---+++++.+.. ..++ +....+|-.. ...
T Consensus 247 l~y~~aGH~p~~i~~~~~~~~~~~l~------------------------------~~g~piG~~~-----------~~~ 285 (367)
T COG2208 247 LTYSNAGHEPALILSADGEIEVEDLT------------------------------ALGLPIGLLP-----------DYQ 285 (367)
T ss_pred EEEeeCCCCCeeEEEcCCCceeEEcc------------------------------CCCceeeecC-----------Ccc
Confidence 9999999999888886543 2222 1234555432 356
Q ss_pred ceeEEEEecCCCeEEEEecCCCCC-------CCChHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhC----CCCCCeEEEE
Q 016684 279 PELQETLLTEDDEFLIMGCDGLWD-------VMSSQGAVTVARKELMLHNDPERCSRELVREALKR----NTCDNLTVIV 347 (384)
Q Consensus 279 p~i~~~~l~~~d~~LvL~SDGlwd-------~l~~~ei~~ii~~~l~~~~~~~~~a~~Lv~~A~~~----gs~DNiTvIv 347 (384)
+.+....+.++| .|+|.|||+.+ .+..+...+++.+. .+..++++++.+.+...+. .-.||+|+++
T Consensus 286 ~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~i~~~l~~~~~~~~~~DDiTll~ 362 (367)
T COG2208 286 YEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGRL--LGQPAEEILEAILESLEELQGDQIQDDDITLLV 362 (367)
T ss_pred chheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHhhCCccccCceEEEE
Confidence 677788888866 88899999998 46666777777753 2467888888777766553 3468899999
Q ss_pred EEcC
Q 016684 348 ICFS 351 (384)
Q Consensus 348 v~~~ 351 (384)
+++.
T Consensus 363 lk~~ 366 (367)
T COG2208 363 LKVK 366 (367)
T ss_pred EEec
Confidence 9975
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=72.70 E-value=44 Score=31.96 Aligned_cols=51 Identities=12% Similarity=0.122 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCccEEEEEEeC--CEEEEEEcCCccEEEeecCee
Q 016684 167 IKSAFVRADYAFADNSSLDISSGTTALTALIFG--RNLIIANAGDCRAVLGRRGRA 220 (384)
Q Consensus 167 l~~a~~~~d~~i~~~~~~~~~~GtT~~~~~i~~--~~l~vanvGDSRayl~r~g~~ 220 (384)
..+.+..+|+.+.+.... .--|++.++++- +++.++|+|-...++..++++
T Consensus 207 p~~~l~~lN~~l~~~~~~---~~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 207 LGALLKQVNHLLRQANLP---GQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred HHHHHHHHHHHHHhcCCC---ceeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 355666778887765321 125777777763 579999999999885444433
No 21
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=34.33 E-value=57 Score=29.05 Aligned_cols=48 Identities=17% Similarity=0.329 Sum_probs=33.8
Q ss_pred eEEEEecCCCC-----------CCCChHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhCC
Q 016684 291 EFLIMGCDGLW-----------DVMSSQGAVTVARKELMLHNDPERCSRELVREALKRN 338 (384)
Q Consensus 291 ~~LvL~SDGlw-----------d~l~~~ei~~ii~~~l~~~~~~~~~a~~Lv~~A~~~g 338 (384)
+-++..|.|+| |+|.++...+.+.+.-.+..=|.+.|+.|++.-..||
T Consensus 72 DTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 72 DTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 35668999988 5666777777665532222348899999999877765
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=30.12 E-value=25 Score=26.30 Aligned_cols=32 Identities=13% Similarity=0.200 Sum_probs=18.1
Q ss_pred ccccceeEEEE-ec-CCCeEEEEecCCCCCCCChH
Q 016684 275 LSAEPELQETL-LT-EDDEFLIMGCDGLWDVMSSQ 307 (384)
Q Consensus 275 v~~~p~i~~~~-l~-~~d~~LvL~SDGlwd~l~~~ 307 (384)
....|....+. +. .|. -+++++||+|=-+...
T Consensus 11 ~v~vPr~g~l~~l~~~G~-Rllva~nGv~lEv~r~ 44 (72)
T PF09436_consen 11 TVMVPRFGALEPLERPGH-RLLVASNGVFLEVRRP 44 (72)
T ss_pred EeecCCCCCCCccccCCc-EEEEecCcEEEEEech
Confidence 34444444433 33 455 4559999999654433
No 23
>PRK15322 invasion protein OrgB; Provisional
Probab=27.98 E-value=2e+02 Score=26.00 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=38.9
Q ss_pred EecCCCeEEEEecCCCCCCCChHHHHHHHHHHhhcCCC-HHHHHHHHHHHHHh
Q 016684 285 LLTEDDEFLIMGCDGLWDVMSSQGAVTVARKELMLHND-PERCSRELVREALK 336 (384)
Q Consensus 285 ~l~~~d~~LvL~SDGlwd~l~~~ei~~ii~~~l~~~~~-~~~~a~~Lv~~A~~ 336 (384)
...++.+|| +|||-.--.+++++.++.....+..+.+ ....|+.|-+.+++
T Consensus 143 ~yhd~~rFV-~~~g~qIaEFsPq~~v~~a~~~l~~~~d~~~~~~r~ls~~~l~ 194 (210)
T PRK15322 143 KYHQEQRFI-MSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAIN 194 (210)
T ss_pred EEcCCCceE-EEeCCchhccCHHHHHHHHHHHHHhCccchHHHHHHHhHHHHH
Confidence 334555566 8999888889999999998888887766 77777777766654
No 24
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=24.04 E-value=38 Score=26.11 Aligned_cols=10 Identities=80% Similarity=1.338 Sum_probs=8.6
Q ss_pred CCCCCCCCCC
Q 016684 1 MAAGMDFSPP 10 (384)
Q Consensus 1 ~~~~~~~~~~ 10 (384)
||+.+|||||
T Consensus 1 ma~~~~~sp~ 10 (85)
T PF06783_consen 1 MAAELDFSPP 10 (85)
T ss_pred CcccccCCCc
Confidence 7888888888
No 25
>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]
Probab=22.46 E-value=4.3e+02 Score=21.73 Aligned_cols=62 Identities=13% Similarity=0.097 Sum_probs=46.8
Q ss_pred EecCCCCCCCChHHHHHHHHHHhhcC--CCHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCCCC
Q 016684 295 MGCDGLWDVMSSQGAVTVARKELMLH--NDPERCSRELVREALKRNTCDNLTVIVICFSPDPPPRI 358 (384)
Q Consensus 295 L~SDGlwd~l~~~ei~~ii~~~l~~~--~~~~~~a~~Lv~~A~~~gs~DNiTvIvv~~~~~~~~~~ 358 (384)
..||=+-|.++-.++.+.+.+..... .-.+..|+++.+..+.+- ..++.+=|.+.++.+|.+
T Consensus 43 ~~~Ddl~dtl~Y~~v~~~i~~~v~~~~~~LiE~lA~~ia~~l~~~~--~~v~~~~v~v~KP~ap~~ 106 (121)
T COG1539 43 AESDDLADTLNYAEVSELIKEIVEGKRFALIETLAEEIADLLLARF--PRVELVEVKVTKPKAPIP 106 (121)
T ss_pred cCccchhheecHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHhhC--CccEEEEEEEECCCCCCC
Confidence 46888999999999999988776432 235788888888877654 778888788877666654
Done!