Your job contains 1 sequence.
>016686
MFPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINE
REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR
NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG
FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD
VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSLKLLDLHGGWLLTEDAILQFCKMHP
RIEVWHELSVICPSDQIGSNGPSPSRTSLRASLVKQKQDPMPMSHSFLDQRLKYSREELL
ELQYSSLSLARPDDSSTQDAMGLR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016686
(384 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2138131 - symbol:AT4G23840 "AT4G23840" species... 690 5.6e-68 1
TAIR|locus:2036199 - symbol:AT1G15740 species:3702 "Arabi... 191 4.2e-12 1
UNIPROTKB|Q723K6 - symbol:inlA "Internalin-A" species:265... 186 2.5e-11 1
UNIPROTKB|F1P5J3 - symbol:TLR2-2 "Toll-like receptor" spe... 164 6.4e-09 1
UNIPROTKB|Q9DGB6 - symbol:TLR2-2 "Toll-like receptor 2 ty... 157 4.2e-08 1
TIGR_CMR|BA_1346 - symbol:BA_1346 "internalin, putative" ... 153 6.8e-08 1
UNIPROTKB|F1NUH0 - symbol:TLR2-2 "Toll-like receptor 2 ty... 153 1.1e-07 1
FB|FBgn0034540 - symbol:Lrt "Leucine-rich tendon-specific... 153 1.2e-07 1
UNIPROTKB|Q724E1 - symbol:inlE "Internalin E" species:265... 144 6.0e-07 1
UNIPROTKB|Q5LMY8 - symbol:SPO3424 "Leucine rich repeat pr... 141 1.5e-06 1
TIGR_CMR|SPO_3424 - symbol:SPO_3424 "leucine rich repeat ... 141 1.5e-06 1
TAIR|locus:2025012 - symbol:RLP1 "AT1G07390" species:3702... 139 6.3e-06 1
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 133 1.3e-05 1
WB|WBGene00020649 - symbol:sma-10 species:6239 "Caenorhab... 135 1.3e-05 1
MGI|MGI:2442298 - symbol:Lingo2 "leucine rich repeat and ... 132 1.7e-05 1
UNIPROTKB|Q724E2 - symbol:inlD "Internalin D" species:265... 131 2.1e-05 1
WB|WBGene00020588 - symbol:T19H12.2 species:6239 "Caenorh... 123 2.3e-05 1
TAIR|locus:2171963 - symbol:RLP55 "receptor like protein ... 128 2.8e-05 1
TAIR|locus:2019662 - symbol:RLP15 "AT1G74190" species:370... 132 3.2e-05 1
UNIPROTKB|Q724D5 - symbol:LMOf2365_0289 "Leucine rich rep... 126 3.5e-05 1
UNIPROTKB|A5H649 - symbol:TLR3 "Toll-like receptor 3" spe... 130 4.9e-05 1
UNIPROTKB|Q5TJ59 - symbol:TLR3 "Toll-like receptor 3" spe... 130 4.9e-05 1
UNIPROTKB|A5C819 - symbol:VITISV_016565 "Putative unchara... 105 5.6e-05 2
TAIR|locus:2091353 - symbol:AT3G28040 species:3702 "Arabi... 130 5.7e-05 1
UNIPROTKB|Q7L985 - symbol:LINGO2 "Leucine-rich repeat and... 127 6.2e-05 1
TAIR|locus:2175991 - symbol:AT5G17680 species:3702 "Arabi... 130 7.5e-05 1
MGI|MGI:2443416 - symbol:Fbxl13 "F-box and leucine-rich r... 127 8.8e-05 1
TAIR|locus:2005498 - symbol:BRI1 "BRASSINOSTEROID INSENSI... 129 8.9e-05 1
FB|FBgn0052372 - symbol:ltl "larval translucida" species:... 127 9.2e-05 1
RGD|1310771 - symbol:Lrrc33 "leucine rich repeat containi... 125 0.00012 1
UNIPROTKB|B9H216 - symbol:FBL5 "F-box family protein" spe... 124 0.00012 1
UNIPROTKB|Q723V1 - symbol:LMOf2365_0374 "Internalin" spec... 124 0.00013 1
UNIPROTKB|Q724E3 - symbol:inlC2 "Internalin C2" species:2... 123 0.00015 1
TAIR|locus:2161303 - symbol:AT5G58150 species:3702 "Arabi... 124 0.00019 1
WB|WBGene00010621 - symbol:egg-6 species:6239 "Caenorhabd... 125 0.00019 1
MGI|MGI:2445095 - symbol:Lrrc33 "leucine rich repeat cont... 123 0.00021 1
UNIPROTKB|B9I9W7 - symbol:FBL1 "F-box family protein" spe... 95 0.00023 2
UNIPROTKB|B9HZ12 - symbol:FBL6 "F-box family protein" spe... 121 0.00027 1
UNIPROTKB|Q65Z91 - symbol:TSKU "Tsukushin" species:9031 "... 118 0.00029 1
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 121 0.00029 1
TAIR|locus:2046515 - symbol:RLP24 "receptor like protein ... 122 0.00035 1
UNIPROTKB|Q81YT0 - symbol:BAS0520 "Putative internalin" s... 123 0.00035 1
TIGR_CMR|BA_0552 - symbol:BA_0552 "internalin, putative" ... 123 0.00035 1
UNIPROTKB|F1NDH7 - symbol:TSKU "Tsukushin" species:9031 "... 117 0.00037 1
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 119 0.00049 1
FB|FBgn0028888 - symbol:CG4168 species:7227 "Drosophila m... 123 0.00050 1
MGI|MGI:1346060 - symbol:Tlr2 "toll-like receptor 2" spec... 120 0.00052 1
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 118 0.00063 1
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 118 0.00063 1
TAIR|locus:2094613 - symbol:RLP38 "receptor like protein ... 119 0.00066 1
UNIPROTKB|Q723P8 - symbol:inlF "Internalin" species:26566... 119 0.00071 1
TAIR|locus:2163665 - symbol:MOL1 "MORE LATERAL GROWTH1" s... 119 0.00078 1
UNIPROTKB|A0ENH4 - symbol:TLR3 "Toll-like receptor 3" spe... 119 0.00079 1
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 117 0.00080 1
TAIR|locus:2037308 - symbol:RLP14 "AT1G74180" species:370... 119 0.00087 1
TAIR|locus:2825762 - symbol:RLP6 "AT1G45616" species:3702... 119 0.00089 1
TAIR|locus:2079721 - symbol:AT3G07550 "AT3G07550" species... 114 0.00090 1
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 116 0.00095 1
>TAIR|locus:2138131 [details] [associations]
symbol:AT4G23840 "AT4G23840" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AY099739 EMBL:AY128902
EMBL:AK176593 IPI:IPI00519129 RefSeq:NP_194115.3 UniGene:At.32402
ProteinModelPortal:Q8L4C7 SMR:Q8L4C7 EnsemblPlants:AT4G23840.1
GeneID:828483 KEGG:ath:AT4G23840 TAIR:At4g23840 eggNOG:NOG280336
HOGENOM:HOG000078805 InParanoid:Q8L4C7 OMA:ISERREW PhylomeDB:Q8L4C7
ProtClustDB:CLSN2680981 Genevestigator:Q8L4C7 Uniprot:Q8L4C7
Length = 597
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 158/362 (43%), Positives = 214/362 (59%)
Query: 2 FPRLSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINER 61
F LSFLNL+WT +T+ PNI LECL+++ CTI S + + + A L K+ L+G F E
Sbjct: 207 FSNLSFLNLSWTSITQTPNIPHLECLHMNTCTIVSEPKTHSSLASLKKLVLSGANFSAET 266
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
E+ + S +++LDVS +SL F FL M LEHLDLSS+ GDDSV VACVG NL+N
Sbjct: 267 ESLSFTNKSCITYLDVSKTSLKNFSFLETMFNLEHLDLSSTAFGDDSVGFVACVGENLKN 326
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM-MPSLKFIDISNTDIKG 180
LN+S+T+ + +GVG LAGH+P LE LS+S T +DD +I +S MP +K +D+ G
Sbjct: 327 LNVSDTQITPSGVGNLAGHVPQLETLSMSQTFVDDLSILLISTTMPCIKALDLGMNSTLG 386
Query: 181 FIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTD 240
F + + + SL ALQ+L LE L+LE + D L LS+ L HLSL + SLTD
Sbjct: 387 FYYLISPQEEKEKSLAALQSLTSLETLSLEHPYLGDKALSGLSSLTGLTHLSLTSTSLTD 446
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRSXXXXXXXXXXXXTEDAILQFCKMHP 300
+LH LSSL L +L +RD VLT++GL F+PP T+D I CK +P
Sbjct: 447 STLHHLSSLPNLVSLGVRDGVLTSNGLEKFRPPNRLRTLDLQGCWLLTKDDIAGLCKRYP 506
Query: 301 RIEVWHELSVICPSDQIGSNGPSP-SRTSLRASLVKQKQDPMPMS-----HSFLDQRLKY 354
I+V HE + S + N P S T V ++ + P S SFLDQR+KY
Sbjct: 507 HIKVRHEHA---DSSSLDQNQLLPRSSTPQSFGKVARRNNQRPESSVAVPRSFLDQRVKY 563
Query: 355 SR 356
+R
Sbjct: 564 NR 565
Score = 153 (58.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 70/270 (25%), Positives = 126/270 (46%)
Query: 4 RLSFLNLAWTGVTKLPNISSLECLNLS--NCTIDSILEGNENKAPLAKISLAGTTFINER 61
+L +L++ + VT +S L+ NLS N + SI + N L + + T ++E
Sbjct: 185 KLEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQ-TPNIPHLECLHMNTCTIVSEP 243
Query: 62 EAFLYIETSLLSFLDVSN-SSLSRFCFLTQMKALEHLDLSSSMIGDDS-VEMVACVGANL 119
+ + + L +N S+ + T + +LD+S + + + S +E + NL
Sbjct: 244 KTHSSLASLKKLVLSGANFSAETESLSFTNKSCITYLDVSKTSLKNFSFLETMF----NL 299
Query: 120 RNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMS-MMPSLKFIDISNTDI 178
+L+LS+T F VG +A NL+ L++S TQI + ++ +P L+ + +S T +
Sbjct: 300 EHLDLSSTAFGDDSVGFVACVGENLKNLNVSDTQITPSGVGNLAGHVPQLETLSMSQTFV 359
Query: 179 KGF-IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNAS 237
I + + +L N + + + +L L + L LSL +
Sbjct: 360 DDLSILLISTTMPCIKALDLGMNSTLGFYYLISPQEEKEKSLAALQSLTSLETLSLEHPY 419
Query: 238 LTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
L D +L LSSL+ LT+LS+ LT+S L
Sbjct: 420 LGDKALSGLSSLTGLTHLSLTSTSLTDSTL 449
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 69/242 (28%), Positives = 117/242 (48%)
Query: 36 SILEGNENKAPLAKISLAGTTFIN-EREAFL--YIETSLLSFLDVSNSSLSRFCFLTQMK 92
S+LEG K + I L G + +N E A++ ++ L+ D + S +T +
Sbjct: 54 SLLEGF--KYSVENIDLRGKSSVNAEWMAYIGGFVNLITLNLSDCQRINSSTLWPITGLT 111
Query: 93 ALEHLDLSSSM-IGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSG 151
+L LDLS + D ++ + V NL+ L +S T + G+ +LA L L +L L G
Sbjct: 112 SLTELDLSRCFKVTDAGMKHLQSV-VNLKKLWISQTGVTEVGISLLAS-LKKLSLLDLGG 169
Query: 152 TQIDDYAISYMSMMPSLKFIDI--SNTDIKGFIQ--QVGAETDLVLSLTALQ---NLNHL 204
+ D + + + L+++DI SN +G + + + L LS T++ N+ HL
Sbjct: 170 LPVTDQNLISLQALTKLEYLDIWGSNVTNQGAVSILKFSNLSFLNLSWTSITQTPNIPHL 229
Query: 205 ERLNLEQ-TQVSDA-TLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVL 262
E L++ T VS+ T L++ K+L+ LS N S SL ++ S +T L + L
Sbjct: 230 ECLHMNTCTIVSEPKTHSSLASLKKLV-LSGANFSAETESL-SFTNKSCITYLDVSKTSL 287
Query: 263 TN 264
N
Sbjct: 288 KN 289
>TAIR|locus:2036199 [details] [associations]
symbol:AT1G15740 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR HSSP:P25147 eggNOG:NOG69615
UniGene:At.48194 UniGene:At.69991 EMBL:AY142631 IPI:IPI00545317
RefSeq:NP_563980.2 ProteinModelPortal:Q8H1Q4 SMR:Q8H1Q4
STRING:Q8H1Q4 EnsemblPlants:AT1G15740.1 GeneID:838143
KEGG:ath:AT1G15740 TAIR:At1g15740 HOGENOM:HOG000239257
InParanoid:Q8H1Q4 OMA:GSNGLRH PhylomeDB:Q8H1Q4
ProtClustDB:CLSN2679913 Genevestigator:Q8H1Q4 Uniprot:Q8H1Q4
Length = 585
Score = 191 (72.3 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 75/275 (27%), Positives = 128/275 (46%)
Query: 14 GVTKLPNISSLECLNLS--NCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSL 71
G+ L ++ LE LN+ NC D+ +E L + + + + ++L +
Sbjct: 228 GLVHLRALTKLESLNIKWCNCITDADMEPLSVLTNLRSLQICCSKITDIGISYLK-GLNK 286
Query: 72 LSFLDVSNSS-LSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR 128
L+ L++ ++ C LT + L +L+L+ D E + + NL+ LNL
Sbjct: 287 LNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRCNFSDSGCEKFSDL-INLKILNLGMNN 345
Query: 129 FSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI--KGFIQQVG 186
+++ + L G L LE L+L +I D + ++S M LK +++S+T++ G G
Sbjct: 346 ITNSCLVHLKG-LTKLESLNLDSCRIGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSG 404
Query: 187 AET--DLVLSLTA--------LQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ LS T L L L LNL+ V+DA L L++ L HL L A
Sbjct: 405 LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSLTGLTHLDLFGA 464
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFK 271
+TD + L +L KL +L I LT++G+ + K
Sbjct: 465 RITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIK 499
Score = 191 (72.3 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 77/276 (27%), Positives = 135/276 (48%)
Query: 14 GVTKLPNISSLECLNLSNC--TIDSILEGNENKAPLAKISLAGTTFINER-EAFL-YIET 69
G++ L ++ L LNL C + L+ A L ++L F + E F I
Sbjct: 277 GISYLKGLNKLNLLNLEGCRHVTAACLDTLTALAGLMYLNLNRCNFSDSGCEKFSDLINL 336
Query: 70 SLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRF 129
+L+ L ++N + S L + LE L+L S IGD+ + ++ + L++L LS+T
Sbjct: 337 KILN-LGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGM-LELKSLELSDTEV 394
Query: 130 SSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISN---TD--IKGFIQQ 184
S G+ L+G L NLE ++LS T + D + +S + SL+ +++ TD +
Sbjct: 395 GSNGLRHLSG-LSNLESINLSFTVVTDSGLRKLSGLTSLRTLNLDARHVTDAGLSALTSL 453
Query: 185 VG-AETDLVLSLTALQNLNHLERLN-LEQTQVSDATLFP--LSTFKELIHLSL----RNA 236
G DL + NHL L L+ ++ L + K+L L+L +N+
Sbjct: 454 TGLTHLDLFGARITDSGTNHLRNLKKLQSLEICGGGLTDTGVKNIKDLSSLTLLNLSQNS 513
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKP 272
+LTD +L +S L+ L +L++ ++ +++SGL KP
Sbjct: 514 NLTDKTLELISGLTGLVSLNVSNSRVSSSGLRHLKP 549
Score = 152 (58.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 65/268 (24%), Positives = 127/268 (47%)
Query: 1 MFPRLSFLNLAWTGVTKLPNISSLECLNLS-NCTIDSILEGNENKAPLAKISLAGTTFIN 59
M+ L+ N + +G K ++ +L+ LNL N +S L + L ++L I
Sbjct: 313 MYLNLNRCNFSDSGCEKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNLDSCR-IG 371
Query: 60 EREAFLYIETSL-LSFLDVSNSSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEMVACVG 116
+ E +++ L L L++S++ + L+ + LE ++LS +++ D + ++ +
Sbjct: 372 D-EGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGL- 429
Query: 117 ANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNT 176
+LR LNL + AG+ L L L L L G +I D +++ + L+ ++I
Sbjct: 430 TSLRTLNLDARHVTDAGLSALTS-LTGLTHLDLFGARITDSGTNHLRNLKKLQSLEICG- 487
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQ-TQVSDATLFPLSTFKELIHLSLRN 235
G TD + +++L+ L LNL Q + ++D TL +S L+ L++ N
Sbjct: 488 ---------GGLTDT--GVKNIKDLSSLTLLNLSQNSNLTDKTLELISGLTGLVSLNVSN 536
Query: 236 ASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
+ ++ L L L L +L++ L+
Sbjct: 537 SRVSSSGLRHLKPLKNLRSLTLESCKLS 564
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 67/263 (25%), Positives = 115/263 (43%)
Query: 5 LSFLNLAWTGVTK-----LPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLA----G 54
L LNL +T L ++ LE LNL +C I D L L + L+ G
Sbjct: 336 LKILNLGMNNITNSCLVHLKGLTKLESLNLDSCRIGDEGLVHLSGMLELKSLELSDTEVG 395
Query: 55 TTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 114
+ + +E+ LSF V++S L + LT ++ L +L + + D + +
Sbjct: 396 SNGLRHLSGLSNLESINLSFTVVTDSGLRKLSGLTSLRTL---NLDARHVTDAGLSALTS 452
Query: 115 VGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS 174
+ L +L+L R + +G L +L L+ L + G + D + + + SL +++S
Sbjct: 453 L-TGLTHLDLFGARITDSGTNHLR-NLKKLQSLEICGGGLTDTGVKNIKDLSSLTLLNLS 510
Query: 175 -NTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSL 233
N+++ TD L L + L L LN+ ++VS + L L K L L+L
Sbjct: 511 QNSNL----------TDKTLEL--ISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLTL 558
Query: 234 RNASLT--DVSLHQLSSLSKLTN 254
+ L+ D+ Q + L L N
Sbjct: 559 ESCKLSANDIRKLQATDLPNLVN 581
>UNIPROTKB|Q723K6 [details] [associations]
symbol:inlA "Internalin-A" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00746 GO:GO:0005618
GO:GO:0005576 GO:GO:0009405 eggNOG:COG4886 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0030260 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR019948
InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847 EMBL:U25445
RefSeq:YP_013078.1 ProteinModelPortal:Q723K6 STRING:Q723K6
GeneID:2798475 KEGG:lmf:LMOf2365_0471 PATRIC:20322143 KO:K13730
OMA:NLTNINW ProtClustDB:CLSK225140 Gene3D:2.60.40.1220
InterPro:IPR014755 InterPro:IPR013378 InterPro:IPR012569
Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543 Uniprot:Q723K6
Length = 800
Score = 186 (70.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 79/250 (31%), Positives = 128/250 (51%)
Query: 15 VTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSF 74
+T L N+S+L L L N I I + +N L ++ L+ T I++ A + TSL
Sbjct: 135 ITPLANLSNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNT-ISDISALSGL-TSLQQ- 190
Query: 75 LDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AG 133
L N ++ L + LE LD+SS+ + D SV +A + NL +L +N + S
Sbjct: 191 LSFGNQ-VTDLKPLANLTTLERLDISSNKVSDISV--LAKL-TNLESLIATNNQISDITP 246
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE--TDL 191
+GIL NL+ LSL+G Q+ D I ++ + +L +D++N I G T+L
Sbjct: 247 LGILT----NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 300
Query: 192 VLSLTALQNLNHLERL----NLE--QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQ 245
L + N++ L L NLE + Q+ D + P+S K L +L+L +++D+S
Sbjct: 301 KLGANQISNISPLAGLTALTNLELNENQLEDIS--PISNLKNLTYLTLYFNNISDIS--P 356
Query: 246 LSSLSKLTNL 255
+SSL+KL L
Sbjct: 357 VSSLTKLQRL 366
>UNIPROTKB|F1P5J3 [details] [associations]
symbol:TLR2-2 "Toll-like receptor" species:9031 "Gallus
gallus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027185 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0006954 GO:GO:0045087 GO:GO:0005622
GO:GO:0004888 SUPFAM:SSF52200 GeneTree:ENSGT00700000104367
PANTHER:PTHR24365:SF17 OMA:IDWPENY EMBL:AADN02016553
EMBL:AADN02016554 IPI:IPI00576784 ProteinModelPortal:F1P5J3
Ensembl:ENSGALT00000015036 ArrayExpress:F1P5J3 Uniprot:F1P5J3
Length = 733
Score = 164 (62.8 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 76/275 (27%), Positives = 134/275 (48%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET--SL 71
G+ KL + +C L + N++++ L +++ + I E F +++ L
Sbjct: 274 GMPKLMEVEMKDCTLLGTGKWYKQIHANQSQS-LRILTIENLS-IEEFYLFTDLQSVLDL 331
Query: 72 LS-FLDVSNSSLSRF---CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNL 124
LS F V+ + F C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNL
Sbjct: 332 LSLFRKVTVENTKVFLVPCKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNL 391
Query: 125 SNTRFSSAGV-GILAGHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFI 182
S S + G HL NL +L +S + I M P +LK++++S+T I
Sbjct: 392 SQNSLSDLKMTGKSLFHLRNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLT 449
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTD 240
+ + + VL ++A N+L+ L+ + + L L T E + N
Sbjct: 450 TCIPSTLE-VLDVSA----NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMS 502
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSFKPPRS 275
+S ++L+S SK L++R A + + L + RS
Sbjct: 503 ISRNKLNSFSKEEPLTVRGAQVGSVQLSLMECHRS 537
>UNIPROTKB|Q9DGB6 [details] [associations]
symbol:TLR2-2 "Toll-like receptor 2 type-2" species:9031
"Gallus gallus" [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0034134 "toll-like
receptor 2 signaling pathway" evidence=IEA] [GO:0050707 "regulation
of cytokine secretion" evidence=IEA] [GO:0050729 "positive
regulation of inflammatory response" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=NAS] [GO:0042494 "detection of bacterial lipoprotein"
evidence=NAS] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR017241 InterPro:IPR027185 Pfam:PF01582
PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450 SMART:SM00255
GO:GO:0016021 GO:GO:0006954 InterPro:IPR000483 SMART:SM00082
GO:GO:0045087 InterPro:IPR018247 GO:GO:0005622 GO:GO:0004888
GO:GO:0002224 SUPFAM:SSF52200 eggNOG:NOG251801 HOVERGEN:HBG108574
PANTHER:PTHR24365:SF17 EMBL:AB046533 IPI:IPI00576129
UniGene:Gga.46177 ProteinModelPortal:Q9DGB6 SMR:Q9DGB6
STRING:Q9DGB6 GO:GO:0042494 Uniprot:Q9DGB6
Length = 781
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 73/270 (27%), Positives = 130/270 (48%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET--SL 71
G+ KL + +C L + N++++ L +++ + I E F +++ L
Sbjct: 274 GMPKLMEVEMKDCTLLGTGKWYKQIHANQSQS-LRILTIENLS-IEEFYLFTDLQSVLDL 331
Query: 72 LS-FLDVSNSSLSRF---CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNL 124
LS F V+ + F C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNL
Sbjct: 332 LSLFRKVTVENTKVFLVPCKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNL 391
Query: 125 SNTRFSSAGV-GILAGHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFI 182
S S + G HL NL +L +S + I M P +LK++++S+T I
Sbjct: 392 SQNSLSDLKMTGKSLFHLRNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLT 449
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTD 240
+ + + VL ++A N+L+ L+ + + L L T E + N
Sbjct: 450 TCIPSTLE-VLDVSA----NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMS 502
Query: 241 VSLHQLSSLSKLTNLSIRDAVLTNSGLGSF 270
+S ++L+S SK S + L ++ +F
Sbjct: 503 ISRNKLNSFSKEEFESFKQMELLDASANNF 532
>TIGR_CMR|BA_1346 [details] [associations]
symbol:BA_1346 "internalin, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00395 EMBL:AE016879
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
KO:K13730 Gene3D:2.60.40.1220 InterPro:IPR014755 HSSP:P25146
InterPro:IPR001119 PROSITE:PS51272 RefSeq:NP_843808.1
RefSeq:YP_027515.1 ProteinModelPortal:Q81TD6 DNASU:1086745
EnsemblBacteria:EBBACT00000011375 EnsemblBacteria:EBBACT00000019330
GeneID:1086745 GeneID:2853061 KEGG:ban:BA_1346 KEGG:bat:BAS1246
HOGENOM:HOG000086132 ProtClustDB:CLSK916194
BioCyc:BANT260799:GJAJ-1320-MONOMER Uniprot:Q81TD6
Length = 542
Score = 153 (58.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 71/260 (27%), Positives = 125/260 (48%)
Query: 7 FLN----LAWTGVTKLPNISSLECLNLSNCTI-DSILEGNENKAPLAKISLAGTTFINER 61
FLN L ++ + +PN+ SL ++N I D N + L ++L G F
Sbjct: 2 FLNTNEILDYSALKYMPNLKSL---TVANAKIKDPSFFANLKQ--LNHLALRGNEF---S 53
Query: 62 EAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRN 121
+ ++ L LD+SN+ ++ L +MK ++ L LS + I D V +A + L
Sbjct: 54 DVTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED--VTALAKM-EQLDY 110
Query: 122 LNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSL-----KFIDISNT 176
LNL+N + ++ V L+ L N+ L+L+G QI+D Y + L K D+S
Sbjct: 111 LNLANNKITN--VAPLSA-LKNVTYLTLAGNQIEDIKPLYSLPLTDLVLTRNKVKDLSGI 167
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+ ++++ + + +T L + L++L+L ++ D T PLS+ L L L
Sbjct: 168 EQMKQLEELWIGKNEIKDVTPLSKMTQLKQLHLPNNELKDIT--PLSSLVNLQKLDLEAN 225
Query: 237 SLTDVSLHQLSSLSKLTNLS 256
++D++ S+L KL LS
Sbjct: 226 YISDLT--PASNLKKLVFLS 243
>UNIPROTKB|F1NUH0 [details] [associations]
symbol:TLR2-2 "Toll-like receptor 2 type-2" species:9031
"Gallus gallus" [GO:0002237 "response to molecule of bacterial
origin" evidence=IEA] [GO:0002755 "MyD88-dependent toll-like
receptor signaling pathway" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027185 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 GO:GO:0045087 GO:GO:0005622
GO:GO:0004888 SUPFAM:SSF52200 GeneTree:ENSGT00700000104367
PANTHER:PTHR24365:SF17 EMBL:AADN02016553 EMBL:AADN02016554
IPI:IPI00823238 Ensembl:ENSGALT00000038924 ArrayExpress:F1NUH0
Uniprot:F1NUH0
Length = 728
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 70/251 (27%), Positives = 123/251 (49%)
Query: 14 GVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET--SL 71
G+ KL + +C L + N++++ L +++ + I E F +++ L
Sbjct: 274 GMPKLMEVEMKDCTLLGTGKWYKQIHANQSQS-LRILTIENLS-IEEFYLFTDLQSVLDL 331
Query: 72 LS-FLDVSNSSLSRF---CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNL 124
LS F V+ + F C L+Q + +LE+LDLS++++GD S+E AC GA +L+ LNL
Sbjct: 332 LSLFRKVTVENTKVFLVPCKLSQHLLSLEYLDLSANLLGDQSLEHSACQGAWPSLQTLNL 391
Query: 125 SNTRFSSAGV-GILAGHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDISNTDIKGFI 182
S S + G HL NL +L +S + I M P +LK++++S+T I
Sbjct: 392 SQNSLSDLKMTGKSLFHLRNLNLLDISENNFGE--IPDMCEWPENLKYLNLSSTQIPKLT 449
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNASLTD 240
+ + + VL ++A N+L+ L+ + + L L T E + N
Sbjct: 450 TCIPSTLE-VLDVSA----NNLQDFGLQLPFLKELYLTKNHLKTLPEATDIP--NLVAMS 502
Query: 241 VSLHQLSSLSK 251
+S ++L+S SK
Sbjct: 503 ISRNKLNSFSK 513
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 68/242 (28%), Positives = 111/242 (45%)
Query: 20 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 79
+IS L+C +L N T S + +N + + +G + AFL I L + N
Sbjct: 153 SISLLDC-SLRNVTFLSDAKIFDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGN 211
Query: 80 SSLS-RFCFLTQMKALEHLDLSSSMIGDDSVEMVACVG-ANLRNLNLSNTRFSSAGVGIL 137
+ +S + L+ + ALE LDL+++ I ++ VG +L L LSN + SS
Sbjct: 212 ALMSVPWNALSTLSALERLDLANNKI--KALGTADFVGLTSLVYLELSNNQISSISQRTF 269
Query: 138 AGHLPNLEILSLSGTQIDDYAISYMSMMP--SLKFIDISNTDIKGFIQQVGAETDLVLSL 195
+L LE+L L G ++ DYA S S+ SL+ +D+ ++ G LS
Sbjct: 270 V-NLRKLEVLKLGGNRLGDYAQSLRSLSQCLSLRQLDLQANNLNG-----------PLSE 317
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
L + +LE LNL + + L+ F L+ LSLR+ + + H L L +L
Sbjct: 318 QTLPGMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDVLQDHAFFGLGALDSL 377
Query: 256 SI 257
+
Sbjct: 378 DL 379
>UNIPROTKB|Q724E1 [details] [associations]
symbol:inlE "Internalin E" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012893.1 ProteinModelPortal:Q724E1
SMR:Q724E1 STRING:Q724E1 GeneID:2799899 KEGG:lmf:LMOf2365_0283
PATRIC:20321779 OMA:FTENEEP ProtClustDB:CLSK491300 Uniprot:Q724E1
Length = 499
Score = 144 (55.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 50/169 (29%), Positives = 91/169 (53%)
Query: 99 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 158
LS+ G ++E + + NL L L++ + + V LA +L + L LSG + D
Sbjct: 79 LSAKSAGITTIEGMQYL-TNLSELELTDNQITD--VSPLA-NLTKITELGLSGNPLKD-- 132
Query: 159 ISYMSMMPSLKFIDISNTDIK------GF--IQQVGAETDLVLSLTALQNLNHLERLNLE 210
+S ++ + SLK + + TDI G +Q++ + + + ++ L L++L+ L+L
Sbjct: 133 VSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLG 192
Query: 211 QTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRD 259
TQVSD T P++ +L L+ N ++D+S L+SLS LT + +R+
Sbjct: 193 YTQVSDLT--PIANLSKLTILNAENCKVSDIS--PLASLSSLTEVYLRE 237
>UNIPROTKB|Q5LMY8 [details] [associations]
symbol:SPO3424 "Leucine rich repeat protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR025875 Pfam:PF12799
RefSeq:YP_168620.1 ProteinModelPortal:Q5LMY8 GeneID:3194873
KEGG:sil:SPO3424 PATRIC:23380307 Uniprot:Q5LMY8
Length = 556
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 56/181 (30%), Positives = 95/181 (52%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ ++ L LDL+++ + D + +A + L L+L++T+ S + LA L L +L
Sbjct: 43 IAELTELRDLDLNNTQVSD--IAPLAAL-TRLNALSLNDTQVSD--IAPLAA-LTRLTML 96
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLT--------AL 198
SL+ TQ+ D I+ ++ + L + + NT + I + A T L LSL AL
Sbjct: 97 SLNNTQVSD--IAPLAALTRLTGLWLHNTQVSD-IAPLAALTRLTGLSLNKTQVSDIAAL 153
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
L L L+L TQVSD + PL++ L LSL N +D++ L++L++L LS+
Sbjct: 154 AALTRLTTLSLNNTQVSD--IAPLASLTRLTTLSLENMQASDIA--PLAALTRLIMLSLN 209
Query: 259 D 259
+
Sbjct: 210 N 210
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 54/191 (28%), Positives = 86/191 (45%)
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
E + L LD++N+ +S L + L L L+ + + D + +A + L L+L+NT
Sbjct: 45 ELTELRDLDLNNTQVSDIAPLAALTRLNALSLNDTQVSD--IAPLAAL-TRLTMLSLNNT 101
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYA-ISYMSMMPSLKFIDISNTDIKGF----- 181
+ S + LA L L L L TQ+ D A ++ ++ + L +DI
Sbjct: 102 QVSD--IAPLAA-LTRLTGLWLHNTQVSDIAPLAALTRLTGLSLNKTQVSDIAALAALTR 158
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
+ + V + L +L L L+LE Q SD + PL+ LI LSL N D
Sbjct: 159 LTTLSLNNTQVSDIAPLASLTRLTTLSLENMQASD--IAPLAALTRLIMLSLNNTQARD- 215
Query: 242 SLHQLSSLSKL 252
L L L++L
Sbjct: 216 -LRPLRRLTRL 225
>TIGR_CMR|SPO_3424 [details] [associations]
symbol:SPO_3424 "leucine rich repeat protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR025875 Pfam:PF12799
RefSeq:YP_168620.1 ProteinModelPortal:Q5LMY8 GeneID:3194873
KEGG:sil:SPO3424 PATRIC:23380307 Uniprot:Q5LMY8
Length = 556
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 56/181 (30%), Positives = 95/181 (52%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
+ ++ L LDL+++ + D + +A + L L+L++T+ S + LA L L +L
Sbjct: 43 IAELTELRDLDLNNTQVSD--IAPLAAL-TRLNALSLNDTQVSD--IAPLAA-LTRLTML 96
Query: 148 SLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLT--------AL 198
SL+ TQ+ D I+ ++ + L + + NT + I + A T L LSL AL
Sbjct: 97 SLNNTQVSD--IAPLAALTRLTGLWLHNTQVSD-IAPLAALTRLTGLSLNKTQVSDIAAL 153
Query: 199 QNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
L L L+L TQVSD + PL++ L LSL N +D++ L++L++L LS+
Sbjct: 154 AALTRLTTLSLNNTQVSD--IAPLASLTRLTTLSLENMQASDIA--PLAALTRLIMLSLN 209
Query: 259 D 259
+
Sbjct: 210 N 210
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 54/191 (28%), Positives = 86/191 (45%)
Query: 68 ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNT 127
E + L LD++N+ +S L + L L L+ + + D + +A + L L+L+NT
Sbjct: 45 ELTELRDLDLNNTQVSDIAPLAALTRLNALSLNDTQVSD--IAPLAAL-TRLTMLSLNNT 101
Query: 128 RFSSAGVGILAGHLPNLEILSLSGTQIDDYA-ISYMSMMPSLKFIDISNTDIKGF----- 181
+ S + LA L L L L TQ+ D A ++ ++ + L +DI
Sbjct: 102 QVSD--IAPLAA-LTRLTGLWLHNTQVSDIAPLAALTRLTGLSLNKTQVSDIAALAALTR 158
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDV 241
+ + V + L +L L L+LE Q SD + PL+ LI LSL N D
Sbjct: 159 LTTLSLNNTQVSDIAPLASLTRLTTLSLENMQASD--IAPLAALTRLIMLSLNNTQARD- 215
Query: 242 SLHQLSSLSKL 252
L L L++L
Sbjct: 216 -LRPLRRLTRL 225
>TAIR|locus:2025012 [details] [associations]
symbol:RLP1 "AT1G07390" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0007165
"signal transduction" evidence=IC] [GO:0006457 "protein folding"
evidence=RCA] [GO:0006857 "oligopeptide transport" evidence=RCA]
[GO:0009408 "response to heat" evidence=RCA] [GO:0009644 "response
to high light intensity" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002684 InterPro:IPR025875 Pfam:PF12799
InterPro:IPR013210 Pfam:PF08263 IPI:IPI00938679
RefSeq:NP_001154318.1 UniGene:At.51513 ProteinModelPortal:F4HQM4
SMR:F4HQM4 PRIDE:F4HQM4 EnsemblPlants:AT1G07390.3 GeneID:837251
KEGG:ath:AT1G07390 OMA:TESSWAP ArrayExpress:F4HQM4 Uniprot:F4HQM4
Length = 1083
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 43/161 (26%), Positives = 79/161 (49%)
Query: 24 LECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSL 82
L+ L LSNC++ S + G ++ L + L+ +L + L + +S +SL
Sbjct: 459 LKMLYLSNCSLGSTMLGFLVHQRDLCFVDLSHNKLTGTFPTWLVKNNTRLQTILLSGNSL 518
Query: 83 SRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLP 142
++ + L+ LD+SS+MI D E + V NLR +N S+ F + G +
Sbjct: 519 TKLQLPILVHGLQVLDISSNMIYDSIQEDIGMVFPNLRFMNFSSNHFQGT-IPSSIGEMK 577
Query: 143 NLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTDIKGFI 182
+L++L +S + I ++S SL+ + +SN ++G I
Sbjct: 578 SLQVLDMSSNGLYGQLPIMFLSGCYSLRVLKLSNNQLQGKI 618
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/204 (29%), Positives = 98/204 (48%)
Query: 75 LDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSA 132
LD+S + L + + LE LDLS ++I VE + NLR L + N R
Sbjct: 63 LDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGL-KNLRYLRIKNNRLKIL 121
Query: 133 GVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGA-ETDL 191
VG+ +G L NL L +S +I L F+D + D+ +QQ+ A E DL
Sbjct: 122 PVGVFSG-LSNLRRLDISENEI-------------LVFLDYTFRDMIN-LQQLDAGENDL 166
Query: 192 V-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS------LH 244
V +S A L L+ LN++++ ++ LS + L L LR +++ + LH
Sbjct: 167 VFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLH 226
Query: 245 QLSSLSKLTNLSIRDAVLTNSGLG 268
QL +L ++ + S + + +NS +G
Sbjct: 227 QLRTL-QILHWSSLEMLNSNSLVG 249
>WB|WBGene00020649 [details] [associations]
symbol:sma-10 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=IGI] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
[GO:0034713 "type I transforming growth factor beta receptor
binding" evidence=IPI] [GO:0005114 "type II transforming growth
factor beta receptor binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0040018 GO:GO:0000003 GO:GO:0007179 GO:GO:0030511
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 HSSP:Q9UQH9 EMBL:FO081576
GeneID:176849 KEGG:cel:CELE_T21D12.9 CTD:176849 UCSC:T21D12.9c.1
NextBio:894278 RefSeq:NP_499896.1 ProteinModelPortal:Q965M2
SMR:Q965M2 STRING:Q965M2 EnsemblMetazoa:T21D12.9a.1
EnsemblMetazoa:T21D12.9a.2 WormBase:T21D12.9a HOGENOM:HOG000022300
InParanoid:Q965M2 OMA:PIATIHP ArrayExpress:Q965M2 Uniprot:Q965M2
Length = 881
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 64/247 (25%), Positives = 116/247 (46%)
Query: 23 SLECLNLSNCTIDSILEGNENKAP---LAKISLAGTTFINEREAFLYIETSLLSFLDVSN 79
++E L+L++ +I I G ++ + L + LA I F + L LD++
Sbjct: 172 NIEKLDLASNSITDI--GTDHFSSFNTLVTLKLA-RNHITTLNQFSFSRLRKLESLDLTR 228
Query: 80 SSLS--RFCFLTQMKALEHLDLSSSMIG--DDSVEMVACVGANLRNLNLSNTRFSSAGVG 135
+ + RF Q+ +L+++ L+ + + DD + AC G L++LNLS R + G
Sbjct: 229 NMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGM-FYACEG--LKHLNLSTNRVQAVTEG 285
Query: 136 ILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIK----GFIQQVGAETDL 191
+ G L +LE+L LS QI + IS S P LK++ + + I+ G + + +L
Sbjct: 286 WMFG-LTSLEVLDLSYNQIQSFHISSWSHTPKLKWLSLHSNRIQSLPSGSFRVLRQLEEL 344
Query: 192 VLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSK 251
+LS ++ +L+ + + D + L+ E A L + S+ L SL +
Sbjct: 345 ILSANSIDSLHKFALVGMSSLHKLDLSSNTLAVCVE------DGAVLYNTSMPFLRSL-R 397
Query: 252 LTNLSIR 258
TN +R
Sbjct: 398 FTNNQLR 404
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 59/193 (30%), Positives = 92/193 (47%)
Query: 67 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLS 125
IET +L S++ F++ LE +DLS ++I + VE A NLR+L L
Sbjct: 57 IETKILDLSKNRLKSINPEEFISY-PLLEEIDLSDNIIAN--VEPGAFNNLFNLRSLRLK 113
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
R +G+ G L NL L +S +I + YM F D+ N +K +V
Sbjct: 114 GNRLKLVPLGVFTG-LSNLTKLDISENKIV-ILLDYM-------FQDLHN--LKSL--EV 160
Query: 186 GAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
G + DLV +S A L LE+L LE+ ++ LS + LI L L++ ++ ++ ++
Sbjct: 161 G-DNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLIALHLKHLNINNMPVY 219
Query: 245 QLSSLSKLTNLSI 257
L L NL I
Sbjct: 220 AFKRLFHLKNLEI 232
>UNIPROTKB|Q724E2 [details] [associations]
symbol:inlD "Internalin D" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012892.1 ProteinModelPortal:Q724E2
STRING:Q724E2 GeneID:2799473 KEGG:lmf:LMOf2365_0282 PATRIC:20321775
OMA:AESSNIA ProtClustDB:CLSK491294 Uniprot:Q724E2
Length = 568
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 57/244 (23%), Positives = 117/244 (47%)
Query: 28 NLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCF 87
++S +DSI E + +A SL G ++N I+T +L+ N+ ++
Sbjct: 68 DVSQAELDSISEVTAESSNIA--SLEGAQYLNN------IDTLILN-----NNKITDLNS 114
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L + L L+ + + + D + +A V +L L L+ + G+ +L NLE +
Sbjct: 115 LAGLSKLRILEANDNQLSD--ISALANV-TSLHQLRLAGNQIKQLN-GV--SNLINLETI 168
Query: 148 SLSGTQIDDYA-ISYMSMMPSL--KFIDISN-TDIKGF--IQQVGAETDLVLSLTALQNL 201
LS QI D + +S + + L + DIS+ + I G + + A+ + + L+ + +L
Sbjct: 169 ELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSL 228
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSKLTNLSIRDA 260
+E + L++ Q+SD T P++ L ++ L ++D+S L L + +++ +
Sbjct: 229 GAMEIMRLDKNQISDVT--PIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQ 286
Query: 261 VLTN 264
+T+
Sbjct: 287 KITS 290
>WB|WBGene00020588 [details] [associations]
symbol:T19H12.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 EMBL:FO080814 PIR:T34456
RefSeq:NP_504310.1 ProteinModelPortal:O01615 SMR:O01615
STRING:O01615 PaxDb:O01615 EnsemblMetazoa:T19H12.2 GeneID:178881
KEGG:cel:CELE_T19H12.2 UCSC:T19H12.2 CTD:178881 WormBase:T19H12.2
eggNOG:NOG322008 GeneTree:ENSGT00560000077130 HOGENOM:HOG000007361
InParanoid:O01615 OMA:ASADCDE NextBio:902964 InterPro:IPR003603
SMART:SM00446 Uniprot:O01615
Length = 225
Score = 123 (48.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/111 (31%), Positives = 54/111 (48%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDD-SVEMVACVGANLRNLNLSNTRFS 130
L L + L+ + + AL +LDLS + +GDD S +++ ++ + LS R +
Sbjct: 40 LELLSMVKCGLTTLKGMPVLPALNYLDLSDNELGDDASFDVLIKCAPEIKKITLSGNRLT 99
Query: 131 SAGVGILAGHLPNLEILSLSGTQ----IDDYAISYMSMMPSLKFIDISNTD 177
V L LPNL L LS +DDY + M+PSLK +D + D
Sbjct: 100 LDNVRTLK-MLPNLMELDLSNNSSLGLLDDYRVKMFEMIPSLKILDGCDVD 149
>TAIR|locus:2171963 [details] [associations]
symbol:RLP55 "receptor like protein 55" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB012245 IPI:IPI00546089
RefSeq:NP_199389.1 UniGene:At.28004 ProteinModelPortal:Q9FK66
SMR:Q9FK66 PaxDb:Q9FK66 PRIDE:Q9FK66 EnsemblPlants:AT5G45770.1
GeneID:834616 KEGG:ath:AT5G45770 TAIR:At5g45770 eggNOG:NOG280143
HOGENOM:HOG000082852 InParanoid:Q9FK66 OMA:IRISITR PhylomeDB:Q9FK66
ProtClustDB:CLSN2916889 Genevestigator:Q9FK66 Uniprot:Q9FK66
Length = 425
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 71/277 (25%), Positives = 127/277 (45%)
Query: 5 LSFLNLAWTGVTKLP----NISSLECLNLSNCTIDSILEGNENKAPLAKIS--------- 51
L L L T V+ P + +L+ LN+S T D N N++ + I+
Sbjct: 13 LLLLPLLLTTVSSYPLNPKQLKALQSLNISTPTNDPC-NNNNNQSSSSSITCDDASPYRH 71
Query: 52 LAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLS-------SSMI 104
+ +F N + L + + L L S SLS F + HL +S SS +
Sbjct: 72 ITSISFTN-CSSTLSLPSKTLKPLSKSLISLS-FTNCPSLSPPYHLPISLHSFSAVSSFL 129
Query: 105 GDDSVEMVACVGANLRNLN---LSNTRF-SSAGVGILAGHLPNLEILSLSGTQIDDYAIS 160
++ ++ A L+NL +S+T +S + ++ G++ L L++S + + +
Sbjct: 130 QNNRTKLSGLFLARLKNLKTLYISSTPIQTSRRLYVILGNMHKLTSLTISNSNLT--GLI 187
Query: 161 YMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLF 220
S +L++ID+SN +KG I+ +S+T L+NL + LNL +S
Sbjct: 188 PKSFHSNLRYIDLSNNSLKGSIR---------ISITRLKNL---KSLNLSHNSLSGQIPN 235
Query: 221 PLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
+ + L +LSL + L+ + LSS+S+LT+L +
Sbjct: 236 KIKSLTFLKNLSLASNKLSGTIPNSLSSISELTHLDL 272
>TAIR|locus:2019662 [details] [associations]
symbol:RLP15 "AT1G74190" species:3702 "Arabidopsis
thaliana" [GO:0007165 "signal transduction" evidence=IC]
Pfam:PF00560 InterPro:IPR001611 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG4886 InterPro:IPR013210
Pfam:PF08263 EMBL:AC079678 IPI:IPI00531529 RefSeq:NP_177559.1
UniGene:At.52507 ProteinModelPortal:Q9C6A8 SMR:Q9C6A8
EnsemblPlants:AT1G74190.1 GeneID:843759 KEGG:ath:AT1G74190
TAIR:At1g74190 HOGENOM:HOG000116561 InParanoid:Q9C6A8 OMA:PENIGWI
PhylomeDB:Q9C6A8 ProtClustDB:CLSN2682215 Genevestigator:Q9C6A8
Uniprot:Q9C6A8
Length = 965
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 52/186 (27%), Positives = 87/186 (46%)
Query: 88 LTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEIL 147
L +++ LE LDL+S+ ++S+ +L L L + + L NLE+L
Sbjct: 128 LRKLRKLEILDLASNKF-NNSIFHFLSAATSLTTLFLRSNNMDGSFPAKELRDLTNLELL 186
Query: 148 SLSGTQID-DYAISYMSMMPSLKFIDISNTDIKGFIQQVGAE-TDLVLSL-TALQNLNHL 204
LS + + I +S + LK +D+S + G ++ G TDL+ S+ + + LN++
Sbjct: 187 DLSRNRFNGSIPIQELSSLRKLKALDLSGNEFSGSMELQGKFCTDLLFSIQSGICELNNM 246
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
+ L+L Q ++ L++ L L L + LT L SL L LS+ D N
Sbjct: 247 QELDLSQNKLVGHLPSCLTSLTGLRVLDLSSNKLTGTVPSSLGSLQSLEYLSLFD----N 302
Query: 265 SGLGSF 270
GSF
Sbjct: 303 DFEGSF 308
>UNIPROTKB|Q724D5 [details] [associations]
symbol:LMOf2365_0289 "Leucine rich repeat domain protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 eggNOG:COG4886 EMBL:AE017262
GenomeReviews:AE017262_GR InterPro:IPR025875 Pfam:PF12799
RefSeq:YP_012899.1 ProteinModelPortal:Q724D5 STRING:Q724D5
GeneID:2798892 KEGG:lmf:LMOf2365_0289 PATRIC:20321791
HOGENOM:HOG000086018 OMA:TIRSIKI ProtClustDB:CLSK225143
Uniprot:Q724D5
Length = 361
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 56/206 (27%), Positives = 92/206 (44%)
Query: 72 LSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS 131
L F+D+S + +S+ L + LE + L+ + I D + M + L NL L + S+
Sbjct: 104 LKFVDLSQNKISKLENLANLTELETVSLNYNQITDITPLMNS---PKLYNLELGVNQIST 160
Query: 132 AGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQ 183
+L NL IL+LS Q+ D IS + P L + IS +I +Q
Sbjct: 161 LPS---FENLTNLRILNLSSNQLKD--ISALKDTPQLTNLSISANNISDISVLSECDNLQ 215
Query: 184 QVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
AE++ + S+ L+N LE + Q+ D T PLST + + + ++D S
Sbjct: 216 VFYAESNQLTSIEPLRNKTKLEYFDANFNQIKDVT--PLSTIPTIRSIKIEENQISDFSS 273
Query: 244 ---HQLSSLSKL-TNLSIRDAVLTNS 265
H+L N+ + D L +S
Sbjct: 274 LAGHRLELFDATGQNIYLPDVALGDS 299
>UNIPROTKB|A5H649 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0032722 GO:GO:0032755 GO:GO:0009615 GO:GO:0051092
GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372 SMART:SM00013
GO:GO:0032760 GO:GO:0043330 GO:GO:0032735 GO:GO:0042346
GO:GO:0045078 GO:GO:0032728 GO:GO:0007252 GO:GO:0045080
SUPFAM:SSF52200 GO:GO:0045359 GeneTree:ENSGT00680000099674
GO:GO:0034123 IPI:IPI00713414 UniGene:Bt.12298 HOVERGEN:HBG023181
PANTHER:PTHR24365:SF5 GO:GO:0045356 GO:GO:0034346 EMBL:DAAA02060200
EMBL:EF076741 EMBL:EF076742 EMBL:EF076745 EMBL:EF076746
EMBL:EF076749 STRING:A5H649 Ensembl:ENSBTAT00000011445
InParanoid:A5H649 OMA:WINKTHT Uniprot:A5H649
Length = 904
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 75/269 (27%), Positives = 131/269 (48%)
Query: 3 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTI--DSILE-GNE---NKAPLAKISLA--- 53
P L LNL +++L + + + C+NL+ + +SI + N+ N L K+ L+
Sbjct: 100 PWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNG 159
Query: 54 -GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
+T + + ++ LLS +S+ + F FL +L+ L+LSS+ I + S
Sbjct: 160 LSSTKLGTQLQLENLQELLLSNNKISSLTPEEFDFLGN-SSLKRLELSSNQIKEFSPGCF 218
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPN--LEILSLSGTQIDDYAISYMSMMPSLKF 170
+G L L+L+N + S + L L N +E LSLS Q+D IS+ + LK
Sbjct: 219 HTLG-ELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLD--TISHTTF-DGLKQ 274
Query: 171 IDISNTDI-KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
+++ D+ + ++ +G D L L+ L+ LE N+E +S + + LS + L
Sbjct: 275 TNLTTLDLSRNSLRVMG--NDSFAWLPHLEYLS-LEYNNIEH--LSSRSFYGLSNLRRL- 328
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
LR S T S+ L+SL K+ + S +
Sbjct: 329 --DLRR-SFTRQSI-SLTSLPKIDDFSFQ 353
>UNIPROTKB|Q5TJ59 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9913 "Bos
taurus" [GO:0010008 "endosome membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0050729
"positive regulation of inflammatory response" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=IEA] [GO:0032722
"positive regulation of chemokine production" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0007165
GO:GO:0005789 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0003723 GO:GO:0010008 InterPro:IPR000372 SMART:SM00013
SUPFAM:SSF52200 EMBL:AJ812026 IPI:IPI00713414 RefSeq:NP_001008664.1
UniGene:Bt.12298 HSSP:O15455 ProteinModelPortal:Q5TJ59
STRING:Q5TJ59 PRIDE:Q5TJ59 GeneID:281535 KEGG:bta:281535 CTD:7098
HOVERGEN:HBG023181 InParanoid:Q5TJ59 KO:K05401 OrthoDB:EOG4N30N8
NextBio:20805490 PANTHER:PTHR24365:SF5 Uniprot:Q5TJ59
Length = 904
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 75/269 (27%), Positives = 131/269 (48%)
Query: 3 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTI--DSILE-GNE---NKAPLAKISLA--- 53
P L LNL +++L + + + C+NL+ + +SI + N+ N L K+ L+
Sbjct: 100 PWLEILNLQHNEISQLSDKTFIFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNG 159
Query: 54 -GTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMV 112
+T + + ++ LLS +S+ + F FL +L+ L+LSS+ I + S
Sbjct: 160 LSSTKLGTQLQLENLQELLLSNNKISSLTPGEFDFLGN-SSLKRLELSSNQIKEFSPGCF 218
Query: 113 ACVGANLRNLNLSNTRFSSAGVGILAGHLPN--LEILSLSGTQIDDYAISYMSMMPSLKF 170
+G L L+L+N + S + L L N +E LSLS Q+D IS+ + LK
Sbjct: 219 HTLG-ELSGLSLNNAKLSPSLTEKLCLELSNTSIENLSLSSNQLD--TISHTTF-DGLKQ 274
Query: 171 IDISNTDI-KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELI 229
+++ D+ + ++ +G D L L+ L+ LE N+E +S + + LS + L
Sbjct: 275 TNLTTLDLSRNSLRVMG--NDSFAWLPHLEYLS-LEYNNIEH--LSSRSFYGLSNLRRL- 328
Query: 230 HLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
LR S T S+ L+SL K+ + S +
Sbjct: 329 --DLRR-SFTRQSI-SLTSLPKIDDFSFQ 353
>UNIPROTKB|A5C819 [details] [associations]
symbol:VITISV_016565 "Putative uncharacterized protein"
species:29760 "Vitis vinifera" [GO:0000822 "inositol
hexakisphosphate binding" evidence=ISS] [GO:0009734 "auxin mediated
signaling pathway" evidence=ISS] InterPro:IPR001810 SMART:SM00256
GO:GO:0009734 GO:GO:0000822 eggNOG:KOG1947 EMBL:AM485570
Uniprot:A5C819
Length = 620
Score = 105 (42.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 35/130 (26%), Positives = 57/130 (43%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLE 145
F ++ LE L L + D+S+E +A N + L+L S FS+ G+ +A H N+
Sbjct: 112 FASKYPLLEELRLKRMTVTDESLEFLATTFTNFKALSLLSCDGFSTDGLAAIATHCKNMT 171
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAET--DLVLSLTALQNLNH 203
L + IDD ++S P F + + V + LV +L+ L
Sbjct: 172 ELDIQENGIDDLGGGWLSCFPE-NFTSLEVLNFANLSSDVSFDALEKLVSRCRSLKFLKV 230
Query: 204 LERLNLEQTQ 213
+ + LEQ Q
Sbjct: 231 NKNITLEQLQ 240
Score = 67 (28.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/109 (27%), Positives = 44/109 (40%)
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTF-KELIHLSLRNASLTDVSLH-QLSSLSKLTNL 255
++N L+RL + ++D T + + K L LS+ A +D + LS SKL L
Sbjct: 477 VKNCTKLQRLAVSGL-LTDLTFEYIGKYAKNLETLSVAFAGSSDWGMQCVLSGCSKLRKL 535
Query: 256 SIRDAVLTNSGLGSFKPPRSXXXXXXXXXXXXTEDAILQFCKMHPRIEV 304
IRD N L S T +A + K PR+ V
Sbjct: 536 EIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNV 584
>TAIR|locus:2091353 [details] [associations]
symbol:AT3G28040 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0048443 "stamen development" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004672 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 EMBL:AB028616 EMBL:FJ708729
IPI:IPI00540962 RefSeq:NP_189443.2 UniGene:At.28161
ProteinModelPortal:Q9LRT1 SMR:Q9LRT1 PaxDb:Q9LRT1 PRIDE:Q9LRT1
EnsemblPlants:AT3G28040.1 GeneID:822428 KEGG:ath:AT3G28040
GeneFarm:2365 TAIR:At3g28040 InParanoid:Q9LRT1 OMA:CTSQIPS
PhylomeDB:Q9LRT1 ProtClustDB:CLSN2680201 Uniprot:Q9LRT1
Length = 1016
Score = 130 (50.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 66/248 (26%), Positives = 115/248 (46%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGN--ENKAPLAKISLAGTTFINERE 62
LS NL+ + L +I+SL+ L+L+ + L + N + L +SL+ +
Sbjct: 131 LSHNNLSGQIPSSLGSITSLQHLDLTGNSFSGTLSDDLFNNCSSLRYLSLSHNHLEGQIP 190
Query: 63 AFLYIETSLLSFLDVSNSSLS-RFCFLT---QMKALEHLDLSSSMIGDDSVEMVACVGAN 118
+ L+ S+L+ L++S + S F++ +++ L LDLSS+ + S+ + N
Sbjct: 191 STLF-RCSVLNSLNLSRNRFSGNPSFVSGIWRLERLRALDLSSNSLSG-SIPLGILSLHN 248
Query: 119 LRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
L+ L L +FS A + G P+L + LS + + SL D+SN +
Sbjct: 249 LKELQLQRNQFSGALPSDI-GLCPHLNRVDLSSNHFSGELPRTLQKLKSLNHFDVSNNLL 307
Query: 179 KG-FIQQVGAETDLVL------SLT-----ALQNLNHLERLNLEQTQVSDATLFPLSTFK 226
G F +G T LV LT ++ NL L+ LNL + ++S L + K
Sbjct: 308 SGDFPPWIGDMTGLVHLDFSSNELTGKLPSSISNLRSLKDLNLSENKLSGEVPESLESCK 367
Query: 227 ELIHLSLR 234
EL+ + L+
Sbjct: 368 ELMIVQLK 375
Score = 129 (50.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 70/267 (26%), Positives = 115/267 (43%)
Query: 5 LSFLNLAWTG-VTKLPNISSLECLNLSNCTIDSILEGNENK-APLAKISLAGTTFINERE 62
LS N +TG + L N + L+ L+LS+ + + + L + L G +F
Sbjct: 106 LSLSNNNFTGNINALSNNNHLQKLDLSHNNLSGQIPSSLGSITSLQHLDLTGNSFSGTLS 165
Query: 63 AFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMI-GDDSVEMVACVGANL 119
L+ S L +L +S++ L L + L L+LS + G+ S L
Sbjct: 166 DDLFNNCSSLRYLSLSHNHLEGQIPSTLFRCSVLNSLNLSRNRFSGNPSFVSGIWRLERL 225
Query: 120 RNLNLSNTRFS-SAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDI 178
R L+LS+ S S +GIL+ H NL+ L L Q S + + P L +D+S+
Sbjct: 226 RALDLSSNSLSGSIPLGILSLH--NLKELQLQRNQFSGALPSDIGLCPHLNRVDLSSNHF 283
Query: 179 KGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP--LSTFKELIHLSLRNA 236
G +L +L L++LNH + N D FP + L+HL +
Sbjct: 284 SG---------ELPRTLQKLKSLNHFDVSN--NLLSGD---FPPWIGDMTGLVHLDFSSN 329
Query: 237 SLTDVSLHQLSSLSKLTNLSIRDAVLT 263
LT +S+L L +L++ + L+
Sbjct: 330 ELTGKLPSSISNLRSLKDLNLSENKLS 356
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 127 (49.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 58/193 (30%), Positives = 92/193 (47%)
Query: 67 IETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLS 125
IET +L S++ F++ LE +DLS ++I + VE A NLR+L L
Sbjct: 57 IETKILDLSKNRLKSVNPEEFISY-PLLEEIDLSDNIIAN--VEPGAFNNLFNLRSLRLK 113
Query: 126 NTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQV 185
R +G+ G L NL L +S +I + YM F D+ N +K +V
Sbjct: 114 GNRLKLVPLGVFTG-LSNLTKLDISENKIV-ILLDYM-------FQDLHN--LKSL--EV 160
Query: 186 GAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLH 244
G + DLV +S A L LE+L LE+ ++ LS + LI L L++ ++ ++ ++
Sbjct: 161 G-DNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVY 219
Query: 245 QLSSLSKLTNLSI 257
L L +L I
Sbjct: 220 AFKRLFHLKHLEI 232
>TAIR|locus:2175991 [details] [associations]
symbol:AT5G17680 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA;ISS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00560
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR000767
InterPro:IPR002182 Pfam:PF00931 Pfam:PF01582 PRINTS:PR00364
PROSITE:PS50104 SMART:SM00255 EMBL:CP002688 GO:GO:0007165
GO:GO:0006952 GO:GO:0043531 GO:GO:0005622 InterPro:IPR011713
Pfam:PF07725 SUPFAM:SSF52200 IPI:IPI00548359 RefSeq:NP_197270.1
UniGene:At.54886 ProteinModelPortal:F4KIC7 SMR:F4KIC7 PRIDE:F4KIC7
EnsemblPlants:AT5G17680.1 GeneID:831634 KEGG:ath:AT5G17680
OMA:EIPARIC ArrayExpress:F4KIC7 Uniprot:F4KIC7
Length = 1294
Score = 130 (50.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 78/275 (28%), Positives = 129/275 (46%)
Query: 8 LNLAWTGVTKLPN-ISSLECL---NLSNC----TIDSILEGNENKAPLAKISLAGTTFIN 59
L L+ T + +LP+ IS L CL ++S+C T+ S L G+ L ++L G +
Sbjct: 721 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYL-GH--LVSLKSLNLDGCRRLE 777
Query: 60 EREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANL 119
L TSL + L+VS L+ F ++E L +S + I + + C + L
Sbjct: 778 NLPDTLQNLTSLET-LEVSGC-LNVNEFPRVSTSIEVLRISETSI--EEIPARICNLSQL 833
Query: 120 RNLNLS-NTRFSSAGVGILAGHLPNLEILSLSGTQI-DDYAISYMSMMPSLKFIDISNTD 177
R+L++S N R +S V I L +LE L LSG + + + + M L++ D+ T
Sbjct: 834 RSLDISENKRLASLPVSI--SELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTS 891
Query: 178 IKGFIQQVGAETDL-VL--SLTALQN-------LNHLERLNLEQTQVSDATLF-----PL 222
IK + +G L VL S T ++ L L+ L + + + L PL
Sbjct: 892 IKELPENIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPL 951
Query: 223 STFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
S F +L LSL N ++T++ + + +L L L +
Sbjct: 952 SRFDDLRALSLSNMNMTEIP-NSIGNLWNLLELDL 985
>MGI|MGI:2443416 [details] [associations]
symbol:Fbxl13 "F-box and leucine-rich repeat protein 13"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:2443416 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 GeneTree:ENSGT00700000104313
EMBL:AK029566 EMBL:AK030172 IPI:IPI00228939 IPI:IPI00970564
RefSeq:NP_796050.2 UniGene:Mm.442295 ProteinModelPortal:Q8CDU4
SMR:Q8CDU4 PhosphoSite:Q8CDU4 PRIDE:Q8CDU4
Ensembl:ENSMUST00000051358 GeneID:320118 KEGG:mmu:320118
UCSC:uc008wop.2 UCSC:uc008woq.1 CTD:222235 HOGENOM:HOG000006699
HOVERGEN:HBG051673 InParanoid:Q8CDU4 KO:K10279 OMA:LQIGCKQ
OrthoDB:EOG4DBTD3 NextBio:396064 Bgee:Q8CDU4 CleanEx:MM_FBXL13
Genevestigator:Q8CDU4 Uniprot:Q8CDU4
Length = 790
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 23 SLECLNLSNCT--IDSILEGNENKAPLAKISLAGTTFINEREAFL-----YIETSLLSFL 75
+L LNL NC D +E + L + L+GT NE L E S+ +
Sbjct: 557 NLHYLNLRNCEHLTDLAIEYIASMLSLISVDLSGTLISNEGMTILSRHRKLREVSVSDCV 616
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLS-SSMIGDDSVEMVACVGANLRNLNLSNT-RFSSAG 133
++++ + +C + + LEHLD+S S + DD ++ +A + +LN++ + + AG
Sbjct: 617 NITDFGIRAYCKTSLL--LEHLDVSYCSQLTDDIIKTIAIFCTRITSLNIAGCPKITDAG 674
Query: 134 VGILAGHLPNLEILSLSGT-QIDDYAI 159
+ IL+ L IL +SG Q+ D I
Sbjct: 675 MEILSARCHYLHILDISGCIQLTDQII 701
>TAIR|locus:2005498 [details] [associations]
symbol:BRI1 "BRASSINOSTEROID INSENSITIVE 1" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010224 "response to UV-B"
evidence=IGI] [GO:0005768 "endosome" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0010268
"brassinosteroid homeostasis" evidence=IEP] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IDA] [GO:0043234
"protein complex" evidence=IPI] [GO:0004672 "protein kinase
activity" evidence=IDA] [GO:0060548 "negative regulation of cell
death" evidence=IMP] [GO:1900140 "regulation of seedling
development" evidence=IMP] [GO:0009911 "positive regulation of
flower development" evidence=IGI] [GO:0009742 "brassinosteroid
mediated signaling pathway" evidence=IEP;IMP] [GO:0010584 "pollen
exine formation" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] [GO:0005496 "steroid binding" evidence=IDA]
[GO:0000271 "polysaccharide biosynthetic process" evidence=RCA]
[GO:0002237 "response to molecule of bacterial origin"
evidence=RCA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0009825 "multidimensional cell growth" evidence=RCA]
[GO:0009932 "cell tip growth" evidence=RCA] [GO:0010103 "stomatal
complex morphogenesis" evidence=RCA] [GO:0010817 "regulation of
hormone levels" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009729 "detection of brassinosteroid stimulus" evidence=IMP]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
UniProt:O22476 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0009742 GO:GO:0043234 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005496 GO:GO:0010584
eggNOG:COG0515 GO:GO:0005768 GO:GO:0004714 SUPFAM:SSF56112
GO:GO:0004674 GO:GO:0010008 Gene3D:2.60.120.200 InterPro:IPR013320
GO:GO:0060548 GO:GO:0009911 GO:GO:0048366 EMBL:AL161595
GO:GO:0001578 GO:GO:0010224 HOGENOM:HOG000116551 InterPro:IPR013210
Pfam:PF08263 EMBL:AF017056 EMBL:FJ708766 EMBL:AL078620
IPI:IPI00528172 PIR:T09356 RefSeq:NP_195650.1 UniGene:At.27898
UniGene:At.69020 PDB:3RGX PDB:3RGZ PDB:3RIZ PDB:3RJ0 PDBsum:3RGX
PDBsum:3RGZ PDBsum:3RIZ PDBsum:3RJ0 ProteinModelPortal:O22476
SMR:O22476 DIP:DIP-45997N IntAct:O22476 STRING:O22476 PaxDb:O22476
PRIDE:O22476 EnsemblPlants:AT4G39400.1 GeneID:830095
KEGG:ath:AT4G39400 GeneFarm:612 TAIR:At4g39400 InParanoid:O22476
KO:K13415 OMA:MSAMDTH PhylomeDB:O22476 ProtClustDB:CLSN2682665
EvolutionaryTrace:O22476 Genevestigator:O22476 GermOnline:AT4G39400
GO:GO:0004903 GO:GO:0010268 GO:GO:0009729 GO:GO:1900140
GO:GO:0009647 GO:GO:0048657
Length = 1196
Score = 129 (50.5 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 56/215 (26%), Positives = 105/215 (48%)
Query: 8 LNLAWTGVTK-LPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLY 66
LN+ ++ V+ L +++ LE L LSN I+ + G + A L + L+ +
Sbjct: 84 LNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTS 143
Query: 67 IET-SLLSFLDVSNSSLS---RFCFLTQMKALEHLDLSSSMI-GDDSVEMVACVGAN-LR 120
+ + S L FL+VS+++L + ++ +LE LDLS++ I G + V V G L+
Sbjct: 144 LGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELK 203
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
+L +S + S + NLE L +S I ++ +L+ +DIS + G
Sbjct: 204 HLAISGNKISG---DVDVSRCVNLEFLDVSSNNFST-GIPFLGDCSALQHLDISGNKLSG 259
Query: 181 -FIQQVGAETDL-VLSLTALQNLNHLERLNLEQTQ 213
F + + T+L +L++++ Q + + L L+ Q
Sbjct: 260 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQ 294
>FB|FBgn0052372 [details] [associations]
symbol:ltl "larval translucida" species:7227 "Drosophila
melanogaster" [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0007474 "imaginal disc-derived wing vein
specification" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 GO:GO:0007474 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR026906 Pfam:PF13306 EMBL:BT003535
ProteinModelPortal:Q86P15 SMR:Q86P15 STRING:Q86P15 PaxDb:Q86P15
PRIDE:Q86P15 FlyBase:FBgn0052372 InParanoid:Q86P15
OrthoDB:EOG4NK99V ChiTaRS:ltl ArrayExpress:Q86P15 Bgee:Q86P15
Uniprot:Q86P15
Length = 817
Score = 127 (49.8 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 71/256 (27%), Positives = 111/256 (43%)
Query: 10 LAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIET 69
L + + + S +E L + I S+ N + P+ K+ A +F N+ E F E
Sbjct: 283 LEYLAQDEFASCSKVETLQMGCNHIKSL---NYSLLPILKLKNANFSF-NDIEEFSMAEL 338
Query: 70 SLLSFLDVSNSSLSRFCFL------TQMKALEHLDLSSSMIGDDSVE-MVACVGANLRNL 122
L L S +R L Q L +LDL ++ I DS+ +A +G NLR L
Sbjct: 339 HGLRSLKTLQLSSNRIQRLLPDPRGVQELMLVNLDLDNNRI--DSLNGALAGLG-NLRIL 395
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+ R VG G + L+IL L+G Q+ + M+++PSLK + ++ +I
Sbjct: 396 NLAGNRLEHLQVGDFDGMI-RLDILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITKLE 454
Query: 183 QQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS 242
Q VL L N N + ++ E + + E IHL N + DV
Sbjct: 455 QDFKGLP--VLCQANLTN-NQISTISSELVTNTRCKNHNVPGKLE-IHLD-DNPIMCDVG 509
Query: 243 LHQLSSLSKLTNLSIR 258
L++L L + IR
Sbjct: 510 LNELCRLMAVQEARIR 525
>RGD|1310771 [details] [associations]
symbol:Lrrc33 "leucine rich repeat containing 33" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1310771 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104185 HOGENOM:HOG000113368 CTD:375387
HOVERGEN:HBG081928 OrthoDB:EOG4DBTDK EMBL:BC091190 IPI:IPI00561904
RefSeq:NP_001020166.1 UniGene:Rn.138732 ProteinModelPortal:Q5BK65
PRIDE:Q5BK65 Ensembl:ENSRNOT00000050364 GeneID:303875
KEGG:rno:303875 UCSC:RGD:1310771 InParanoid:Q5BK65 NextBio:652216
ArrayExpress:Q5BK65 Genevestigator:Q5BK65
GermOnline:ENSRNOG00000001752 Uniprot:Q5BK65
Length = 692
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 59/224 (26%), Positives = 98/224 (43%)
Query: 51 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDS 108
++ T ++ E F + S L FLD+S + L FL + +L HL+L+ + +
Sbjct: 309 NVTNITTVSLWEEFSSSDLSALRFLDMSQNQLRHLPDGFLKKTPSLSHLNLNQNCLTKLH 368
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGI-LAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
+ GA L L+LS + + + L G L NL + +LS Q+ S
Sbjct: 369 IREHEPPGA-LTELDLSRNQLAELHLAPGLTGSLKNLRVFNLSSNQLLGVPTGLFHSASS 427
Query: 168 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 227
+ +D+S+ I Q V + + S +N+ L L+L+ + P
Sbjct: 428 ITTLDMSHNQISLCPQTVPLDWEEPSSCVDFRNMASLRSLSLDGCGLKALQDCPFQG-TS 486
Query: 228 LIHLSLR-NASLTDVSLHQLSSLSK-LTNLSIRDAVLTNSGLGS 269
L HL L N + + S+ LS+++ L LS+R N GLGS
Sbjct: 487 LTHLDLSSNWGILNGSVSPLSAVAPTLQVLSLR-----NVGLGS 525
>UNIPROTKB|B9H216 [details] [associations]
symbol:FBL5 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
eggNOG:NOG259467 HOGENOM:HOG000239805 GO:GO:0000822 EMBL:CM000340
RefSeq:XP_002305651.1 EnsemblPlants:POPTR_0004s03400.1
GeneID:7494337 KEGG:pop:POPTR_800382 OMA:PFPDEVL
ProtClustDB:CLSN2715764 Uniprot:B9H216
Length = 579
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 52/182 (28%), Positives = 87/182 (47%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLE 145
F T+ LE L L + D+S+E +A N + L+L S FS+ G+ +A H +L
Sbjct: 105 FATKYPFLEELRLKRMAVSDESLEFLAVNFPNFKVLSLLSCDGFSTDGLAAIATHCKSLT 164
Query: 146 ILSLSGTQIDDYAISYMSMMP----SLKFIDISN--TDIK--GFIQQVGAETDL-VLSLT 196
L + IDD + ++S P SL+ ++ +N TD+ + V L VL +
Sbjct: 165 QLDIQENGIDDKSGGWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKVN 224
Query: 197 ALQNLNHLERLNL---EQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLT 253
+L HL+RL + + T++ + P T ++ + L +A +LH LS L + T
Sbjct: 225 KSISLEHLQRLLVCAPQLTELGTGSFTPELTTRQ--YAELESAFNQCKNLHTLSGLWEAT 282
Query: 254 NL 255
L
Sbjct: 283 AL 284
>UNIPROTKB|Q723V1 [details] [associations]
symbol:LMOf2365_0374 "Internalin" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012983.1 ProteinModelPortal:Q723V1
STRING:Q723V1 GeneID:2797573 KEGG:lmf:LMOf2365_0374 PATRIC:20321953
OMA:QINNLQG ProtClustDB:CLSK225039 Uniprot:Q723V1
Length = 589
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 63/260 (24%), Positives = 130/260 (50%)
Query: 20 NISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 79
++ ++ L L++ I S LEG L + L G +++ + L+ L +S
Sbjct: 69 DLDTINSLTLTSKGISS-LEGMNYLTNLGTLILTGNQ-VSDISPLKGLTN--LTMLQLSG 124
Query: 80 SSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSS-AGVGILA 138
+ +S L+ +K L+ LD++ + + D + ++ + NL+ L L N + + +GV L
Sbjct: 125 NPISDISALSNLKNLQALDINDAQVTD--ITPLSGL-TNLKGLGLYNNQLENLSGVNSLH 181
Query: 139 GHLPNLEILSLSGTQIDDY-AISYMSMMPSLKFIDISN----TDIKG-FIQQVGAETDLV 192
L +L + + T +D+ A+S +S++ + + I+N +++ F+ + A +
Sbjct: 182 -QLRSLNVSNNKLTNLDELQALSNLSVLYANEN-QINNLQGLSNLNNLFLLDLSANQ--I 237
Query: 193 LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVS-LHQLSSLSK 251
+ T L L ++ L + Q+SD T LS+ LI+L + S +S + L+SL+K
Sbjct: 238 VDTTPLAGLTKVQTLYVSNNQISDVT--GLSS---LINLDWLDISQNKISNIRPLNSLTK 292
Query: 252 LTNLSIRDAVLTNSGLGSFK 271
LT + + + ++ N + SF+
Sbjct: 293 LTIIQMTNQLIVNEPI-SFE 311
>UNIPROTKB|Q724E3 [details] [associations]
symbol:inlC2 "Internalin C2" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 ProtClustDB:CLSK491294 RefSeq:YP_012891.1
PDB:4FHO PDBsum:4FHO ProteinModelPortal:Q724E3 SMR:Q724E3
STRING:Q724E3 GeneID:2799149 KEGG:lmf:LMOf2365_0281 PATRIC:20321773
OMA:TAINVIF Uniprot:Q724E3
Length = 548
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 50/189 (26%), Positives = 97/189 (51%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN-LSNTRFSS---AGVGILAGHLP 142
F T + +E + +++IG + + L+NL ++ S V +AG L
Sbjct: 84 FNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAG-LQ 142
Query: 143 NLEILSLSGTQIDDYA-ISYMSMMPSLKFIDISN-TDIK---GF--IQQVGAETDLVLSL 195
+++ L L+ TQI D ++ +S + L ++D++ T+I G +Q + + V L
Sbjct: 143 SIKTLDLTSTQITDVTPLAGLSNLQVL-YLDLNQITNISPLAGLTNLQYLSIGNNQVNDL 201
Query: 196 TALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
T L NL+ L L + ++SD + PL++ LI + L++ ++DVS L++LS L +
Sbjct: 202 TPLANLSKLTTLRADDNKISDIS--PLASLPNLIEVHLKDNQISDVS--PLANLSNLFIV 257
Query: 256 SIRDAVLTN 264
++ + +TN
Sbjct: 258 TLTNQTITN 266
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 52/228 (22%), Positives = 120/228 (52%)
Query: 30 SNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLT 89
SN T D++ + + + +A +S A T + E Y+ +L+ L++ ++ ++ L
Sbjct: 64 SNVT-DAVTQADLDG--IATLS-AFNTGVTTIEGIQYLN-NLIG-LELKDNQITDLTPLK 117
Query: 90 QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSL 149
+ + L+LS + + +V +A + +++ L+L++T+ + V LAG L NL++L L
Sbjct: 118 NLTKITELELSGNPL--KNVSAIAGL-QSIKTLDLTSTQITD--VTPLAG-LSNLQVLYL 171
Query: 150 SGTQIDDYAISYMSMMPSLKFIDISNTDIKGF--------IQQVGAETDLVLSLTALQNL 201
QI + IS ++ + +L+++ I N + + + A+ + + ++ L +L
Sbjct: 172 DLNQITN--ISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASL 229
Query: 202 NHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSL 249
+L ++L+ Q+SD + PL+ L ++L N ++T+ ++ ++L
Sbjct: 230 PNLIEVHLKDNQISDVS--PLANLSNLFIVTLTNQTITNQPVYYQNNL 275
>TAIR|locus:2161303 [details] [associations]
symbol:AT5G58150 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR011009 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005773 SUPFAM:SSF56112 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:AB019228 GO:GO:0004672 HOGENOM:HOG000116551
UniGene:At.22044 UniGene:At.72500 ProtClustDB:CLSN2687596
EMBL:AY091097 EMBL:AY123035 EMBL:FJ708804 IPI:IPI00545821
RefSeq:NP_200623.1 ProteinModelPortal:Q9LVN2 SMR:Q9LVN2
IntAct:Q9LVN2 STRING:Q9LVN2 PRIDE:Q9LVN2 EnsemblPlants:AT5G58150.1
GeneID:835927 KEGG:ath:AT5G58150 GeneFarm:2348 TAIR:At5g58150
InParanoid:Q9LVN2 PhylomeDB:Q9LVN2 Uniprot:Q9LVN2
Length = 785
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 71/273 (26%), Positives = 120/273 (43%)
Query: 4 RLSFLNLAWTGVTKLPN----ISSLECLNLSNCTIDSILEGN-ENKAPLAKISLAGTTFI 58
+L L+L+ +T LP+ +S LE LNLS+ I L N N L + L+ +
Sbjct: 91 KLQTLDLSGNKITSLPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSIS 150
Query: 59 NEREAFLYIETSLLSFLDVSNSSLSRFCF---LTQMKALEHLDLSSSMIGDDSVEMVACV 115
+ A + +L + L + N+ +F L ++L +DLSS+ + +
Sbjct: 151 GKIPAAISNLVNLTT-LKLHNNDF-QFGVPPELVHCRSLLSIDLSSNRLNESLPVGFGSA 208
Query: 116 GANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAIS----YMSMMPSLKFI 171
L++LNLS F + +G+L H N+E + LS + D + + + SL +
Sbjct: 209 FPLLKSLNLSRNLFQGSLIGVL--H-ENVETVDLSENRFDGHILQLIPGHKHNWSSLIHL 265
Query: 172 DISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFP-LSTFKELIH 230
D+S+ G I L++ L HL NL + A FP + L +
Sbjct: 266 DLSDNSFVGHIFN---------GLSSAHKLGHL---NLACNRFR-AQEFPEIGKLSALHY 312
Query: 231 LSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLT 263
L+L +LT++ ++S LS L L + LT
Sbjct: 313 LNLSRTNLTNIIPREISRLSHLKVLDLSSNNLT 345
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 72/264 (27%), Positives = 119/264 (45%)
Query: 22 SSLECLNLS-NCTIDSI-LEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSN 79
+SL L++S NC +D+I + N A L + L G+ I+E F + L L V N
Sbjct: 175 ASLVLLDVSGNC-LDAIPAQILRNAANLMYLDL-GSNNISEINNFELMNLPFLRELRVQN 232
Query: 80 SSLSRFCFLTQMKA--LEHLDLSSSMIGD-DSVEMVACVGANLRNLNLSNTRFSSAGVGI 136
++L R + M L++L L ++I D + NL L++SN + +
Sbjct: 233 NTLRRIHPMAFMNVPQLQYLYLQDNIISTLDGNRLQGF--KNLEVLDVSNNALYA--LPS 288
Query: 137 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETD-LVLSL 195
L LPNL+ + + G I S P+L+ I + N +I + D LV+ L
Sbjct: 289 LKD-LPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLL 347
Query: 196 TALQNLNHLER------LNLEQTQVSDATLFPL--STFKELIHLSLRNASLTDVSLHQLS 247
+L +ER NL+Q + + TL L S+F +L HL+ + + +
Sbjct: 348 VGNNSLAKIERGMFDGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEG 407
Query: 248 SLSKLTNLSIRDAVLTNSGLGSFK 271
+ KL+ L D L+N+ + FK
Sbjct: 408 TFDKLSKLFWLD--LSNNKISGFK 429
>MGI|MGI:2445095 [details] [associations]
symbol:Lrrc33 "leucine rich repeat containing 33"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2445095 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104185 HOGENOM:HOG000113368 CTD:375387
HOVERGEN:HBG081928 OrthoDB:EOG4DBTDK OMA:VIKSRCH EMBL:AK028367
EMBL:AK042502 EMBL:AK084858 EMBL:AK088770 EMBL:AK167934
EMBL:BC027411 IPI:IPI00404394 IPI:IPI00654975 IPI:IPI00655228
RefSeq:NP_666181.2 UniGene:Mm.33498 ProteinModelPortal:Q8BMT4
SMR:Q8BMT4 PhosphoSite:Q8BMT4 PRIDE:Q8BMT4
Ensembl:ENSMUST00000099991 Ensembl:ENSMUST00000115163
Ensembl:ENSMUST00000115165 Ensembl:ENSMUST00000126869
Ensembl:ENSMUST00000143682 GeneID:224109 KEGG:mmu:224109
UCSC:uc007yyg.1 UCSC:uc007yyi.1 InParanoid:Q8BMT4 ChiTaRS:LRRC33
NextBio:377085 Bgee:Q8BMT4 CleanEx:MM_LRRC33 Genevestigator:Q8BMT4
GermOnline:ENSMUSG00000052384 Uniprot:Q8BMT4
Length = 693
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 59/224 (26%), Positives = 97/224 (43%)
Query: 51 SLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFC--FLTQMKALEHLDLSSSMIGDDS 108
++ T +N E F + S L FLD+S + FL + +L HL+L+ + +
Sbjct: 309 NVTNITTVNLWEEFSSSDLSALRFLDMSQNQFRHLPDGFLKKTPSLSHLNLNQNCLKMLH 368
Query: 109 VEMVACVGANLRNLNLSNTRFSSAGVGI-LAGHLPNLEILSLSGTQIDDYAISYMSMMPS 167
+ GA L L+LS+ + + + L G L NL + +LS Q+ S
Sbjct: 369 IREHEPPGA-LTELDLSHNQLAELHLAPGLTGSLRNLRVFNLSSNQLLGVPTGLFDNASS 427
Query: 168 LKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKE 227
+ ID+S+ I Q V + + S +N+ L L+L+ + P
Sbjct: 428 ITTIDMSHNQISLCPQMVPVDWEGPPSCVDFRNMGSLRSLSLDGCGLKALQDCPFQG-TS 486
Query: 228 LIHLSLR-NASLTDVSLHQLSSLSK-LTNLSIRDAVLTNSGLGS 269
L HL L N + + S+ L +++ L LS+RD GLGS
Sbjct: 487 LTHLDLSSNWGVLNGSISPLWAVAPTLQVLSLRDV-----GLGS 525
>UNIPROTKB|B9I9W7 [details] [associations]
symbol:FBL1 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
GO:GO:0048443 GO:GO:0010152 GO:GO:0010011 GO:GO:0010311
HOGENOM:HOG000239805 GO:GO:0019005 GO:GO:0000822 GO:GO:0002237
GO:GO:0016036 ProtClustDB:CLSN2689313 eggNOG:NOG267823 KO:K14485
OMA:PNMTRFR EMBL:CM000350 RefSeq:XP_002321035.1
EnsemblPlants:POPTR_0014s12930.1 GeneID:7491325
KEGG:pop:POPTR_572746 Uniprot:B9I9W7
Length = 584
Score = 95 (38.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 94 LEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTR-FSSAGVGILAGHLPNLEILSLSGT 152
LE + L ++ D+S++++A N + L LS+ FS+ G+ +A + NL L L +
Sbjct: 106 LEEIRLKRMVVSDESLKVIAKSFKNFKVLVLSSCEGFSTDGLAAVAANCRNLRGLDLRES 165
Query: 153 QIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNL 201
++DD + ++S P F +++ +I +GAE +S +AL+ L
Sbjct: 166 EVDDPSGQWLSRFPD-SFTSLASLNISC----LGAE----VSFSALERL 205
Score = 71 (30.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 198 LQNLNHLERLNLEQTQVSDATLFPLSTF-KELIHLSLRNASLTDVSLHQ-LSSLSKLTNL 255
++N L RL+L ++D + T+ K+L LS+ A +D+ LH LS KL L
Sbjct: 427 VENYKDLRRLSLSGL-LTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCEKLCKL 485
Query: 256 SIRDAVLTNSGL 267
IRD + L
Sbjct: 486 EIRDCPFGDKAL 497
>UNIPROTKB|B9HZ12 [details] [associations]
symbol:FBL6 "F-box family protein" species:3694 "Populus
trichocarpa" [GO:0000822 "inositol hexakisphosphate binding"
evidence=ISS] [GO:0009734 "auxin mediated signaling pathway"
evidence=ISS] InterPro:IPR001810 SMART:SM00256 GO:GO:0009734
eggNOG:NOG259467 HOGENOM:HOG000239805 GO:GO:0000822
ProtClustDB:CLSN2715764 EMBL:CM000347 RefSeq:XP_002316664.1
EnsemblPlants:POPTR_0011s04200.1 GeneID:7485598
KEGG:pop:POPTR_568304 Uniprot:B9HZ12
Length = 579
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 49/179 (27%), Positives = 89/179 (49%)
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNL-SNTRFSSAGVGILAGHLPNLE 145
F + LE L L + D+S+E +A N + L+L S FS+ G+ +A H NL
Sbjct: 105 FAAKYPFLEELRLKRMAVSDESLEFLALNFPNFKVLSLLSCDGFSTDGLAAIATHCKNLT 164
Query: 146 ILSLSGTQIDDYAISYMSMMP----SLKFIDISN--TDIK-GFIQQVGAETDLVLSLTAL 198
L + IDD + +++S P SL+ ++ +N TD+ ++++ + + L A
Sbjct: 165 QLDVQENGIDDKSGNWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKAN 224
Query: 199 QN--LNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
++ L HL+RL + Q+++ L T + L+ R + S +QL +L+ L+ L
Sbjct: 225 KSISLEHLQRLLVCAPQLTE-----LGTGSFMPELTARQYAELGSSFNQLKNLNTLSGL 278
>UNIPROTKB|Q65Z91 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0021540
"corpus callosum morphogenesis" evidence=IEA] [GO:0021670 "lateral
ventricle development" evidence=IEA] [GO:0021960 "anterior
commissure morphogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0007275 GO:GO:0005576
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
SMART:SM00013 EMBL:AB100033 EMBL:AB195969 IPI:IPI00682643
IPI:IPI00775744 RefSeq:NP_001005346.1 UniGene:Gga.43824
ProteinModelPortal:Q65Z91 STRING:Q65Z91 GeneID:419088
KEGG:gga:419088 CTD:25987 HOGENOM:HOG000001578 HOVERGEN:HBG054643
InParanoid:Q65Z91 KO:K08130 OrthoDB:EOG4V171F NextBio:20822199
Uniprot:Q65Z91
Length = 369
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 64/256 (25%), Positives = 112/256 (43%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN-EREA 63
LS+ N+A T + LE L+LS+ +++ + E + +PL I L+ ++ +
Sbjct: 93 LSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLPEDCFSSSPLGDIDLSNNKLLDIALDV 152
Query: 64 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
F +D+SN+ LS+ K++ ++ + ++ G+ + G LR LN
Sbjct: 153 FASKGQGKPLNVDLSNNMLSKIT-RNHEKSIPNIQ-NLNLSGNRLTSVPNLQGIPLRYLN 210
Query: 124 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM--MPSLKFIDISNTDIKGF 181
L + G G L L LSLSG D +S S +P+L+ +D+SN
Sbjct: 211 LDGNPLAKIEKGDFKG-LKGLIHLSLSGLH-DFRELSPYSFKELPALQVLDLSNNPN--- 265
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRN-----A 236
++ + AE + LN ++ LNL T VS L L ++LR
Sbjct: 266 LRSLTAEV--------IFGLNSIQELNLSGTGVSSLPKTVLKYLPSLKSITLRKNIQCFK 317
Query: 237 SLTDVSLHQLSSLSKL 252
++ + H+ L+KL
Sbjct: 318 TIKEGQYHRQIGLTKL 333
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 70/254 (27%), Positives = 112/254 (44%)
Query: 14 GVTKLPNISSLECLN-LSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYI---- 67
GV +P+ L C + + S+L G+ P + S + R+ F+ +
Sbjct: 11 GVRSMPS-PLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGI 69
Query: 68 --ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNL 124
ET LL +L++ F + LE L+L+ +++ +VE A NLR L L
Sbjct: 70 PTETRLLDLGKNRIKTLNQDEFAS-FPHLEELELNENIVS--AVEPGAFNNLFNLRTLGL 126
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
+ R +G+ G L NL L +S +I + YM F D+ N +K +
Sbjct: 127 RSNRLKLIPLGVFTG-LSNLTKLDISENKIV-ILLDYM-------FQDLYN--LKSL--E 173
Query: 185 VGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
VG + DLV +S A LN LE+L LE+ ++ LS LI L LR+ ++ +
Sbjct: 174 VG-DNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 232
Query: 244 HQLSSLSKLTNLSI 257
+ L +L L I
Sbjct: 233 YSFKRLYRLKVLEI 246
>TAIR|locus:2046515 [details] [associations]
symbol:RLP24 "receptor like protein 24" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0007165 "signal
transduction" evidence=IC] Pfam:PF00560 InterPro:IPR001611
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG4886
EMBL:AC003033 InterPro:IPR025875 Pfam:PF12799 EMBL:AC002334
HOGENOM:HOG000116562 ProtClustDB:CLSN2683406 IPI:IPI00532583
PIR:D84740 PIR:T01105 RefSeq:NP_180861.1 UniGene:At.66296
ProteinModelPortal:O49329 SMR:O49329 EnsemblPlants:AT2G33020.1
GeneID:817864 KEGG:ath:AT2G33020 TAIR:At2g33020 InParanoid:O49329
OMA:IHIDITS PhylomeDB:O49329 ArrayExpress:O49329
Genevestigator:O49329 Uniprot:O49329
Length = 864
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 84/304 (27%), Positives = 129/304 (42%)
Query: 2 FPRLSFLNLAWTGVTK--LP----NISSLECLNL-SNCTID---SILEGN----ENKAPL 47
F +L +L L T LP N++ L+ L+L SN ID + L G+ N L
Sbjct: 100 FHQLRYLALNRNNFTSASLPSEFCNLNKLKLLSLFSNGFIDLSHNDLMGSFPLVRNLGKL 159
Query: 48 AKISLAGTTF---INEREAFLYIETSL---LSFLDVSNSSLSRFCFLTQMKALEHLDLSS 101
A + L+ F +N + + + L+F ++S+S S+F L + LE L LS
Sbjct: 160 AVLDLSDNHFSGTLNPNNSLFELHSLRYLNLAFNNISSSLPSKFGNLNK---LEVLSLSF 216
Query: 102 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 161
+ ++ + + L L N + G L +L L L LS SY
Sbjct: 217 NGFSGQCFPTISNL-TRITQLYLHNNELT--GSFPLVQNLTKLSFLGLSDNLFSGTIPSY 273
Query: 162 MSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLTALQNLNHLER---------LNLEQT 212
+ PSL +D+ D+ G I+ + T L + L NHLE +NL++
Sbjct: 274 LFTFPSLSTLDLRENDLSGSIEVPNSSTSSKLEIMYL-GFNHLEGKILEPISKLINLKRL 332
Query: 213 QVSDA-TLFP-----LSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSG 266
+S T +P LS K L +L SL+ SL SS S + LS+ VL+ G
Sbjct: 333 DLSFLNTSYPIDLNLLSPLKSLSYLDFSGNSLSPASL---SSSSYIP-LSMESIVLSLCG 388
Query: 267 LGSF 270
+ F
Sbjct: 389 IREF 392
>UNIPROTKB|Q81YT0 [details] [associations]
symbol:BAS0520 "Putative internalin" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF05031 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR006635
PROSITE:PS50978 RefSeq:NP_843087.1 RefSeq:YP_017174.1
RefSeq:YP_026798.1 ProteinModelPortal:Q81YT0
EnsemblBacteria:EBBACT00000010697 EnsemblBacteria:EBBACT00000017841
EnsemblBacteria:EBBACT00000022856 GeneID:1087882 GeneID:2817231
GeneID:2849896 KEGG:ban:BA_0552 KEGG:bar:GBAA_0552 KEGG:bat:BAS0520
HOGENOM:HOG000083246 OMA:GLEYMTN ProtClustDB:CLSK915856
BioCyc:BANT260799:GJAJ-580-MONOMER
BioCyc:BANT261594:GJ7F-607-MONOMER Uniprot:Q81YT0
Length = 1070
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 59/222 (26%), Positives = 107/222 (48%)
Query: 42 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 101
E+ + ++++ I + Y+E L + + S + ++Q+K L+ +DLS
Sbjct: 200 EDLKEIKELNIYAGQGIESLKGLEYMEN--LERITIQGSDVRNIAPISQLKRLKVVDLSF 257
Query: 102 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 161
+ I ++VE + + L L L N R A V L+ L + ++LSG +I D I
Sbjct: 258 NKI--ENVEPLVNL-EKLDILELQNNRI--ADVTPLS-QLKKVRTINLSGNKISD--IKP 309
Query: 162 MSMMPSLKFIDISNTDIKGF--IQQV------GAETDLVLSLTALQNLNHLERLNLEQTQ 213
+ + SL+ + +SN I F I+Q+ G ++ ++++ + ++ + LNLE+
Sbjct: 310 LYNVSSLRKLYVSNNKITDFTGIEQLNKLGTLGVGSNGLVNIEPISQMSGIVELNLEKND 369
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ D T LS L L+L ++DVS SLS L NL
Sbjct: 370 IKDIT--SLSKLTGLQSLNLEENYVSDVS-----SLSNLINL 404
>TIGR_CMR|BA_0552 [details] [associations]
symbol:BA_0552 "internalin, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0009405 "pathogenesis" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF05031 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR006635
PROSITE:PS50978 RefSeq:NP_843087.1 RefSeq:YP_017174.1
RefSeq:YP_026798.1 ProteinModelPortal:Q81YT0
EnsemblBacteria:EBBACT00000010697 EnsemblBacteria:EBBACT00000017841
EnsemblBacteria:EBBACT00000022856 GeneID:1087882 GeneID:2817231
GeneID:2849896 KEGG:ban:BA_0552 KEGG:bar:GBAA_0552 KEGG:bat:BAS0520
HOGENOM:HOG000083246 OMA:GLEYMTN ProtClustDB:CLSK915856
BioCyc:BANT260799:GJAJ-580-MONOMER
BioCyc:BANT261594:GJ7F-607-MONOMER Uniprot:Q81YT0
Length = 1070
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 59/222 (26%), Positives = 107/222 (48%)
Query: 42 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSS 101
E+ + ++++ I + Y+E L + + S + ++Q+K L+ +DLS
Sbjct: 200 EDLKEIKELNIYAGQGIESLKGLEYMEN--LERITIQGSDVRNIAPISQLKRLKVVDLSF 257
Query: 102 SMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISY 161
+ I ++VE + + L L L N R A V L+ L + ++LSG +I D I
Sbjct: 258 NKI--ENVEPLVNL-EKLDILELQNNRI--ADVTPLS-QLKKVRTINLSGNKISD--IKP 309
Query: 162 MSMMPSLKFIDISNTDIKGF--IQQV------GAETDLVLSLTALQNLNHLERLNLEQTQ 213
+ + SL+ + +SN I F I+Q+ G ++ ++++ + ++ + LNLE+
Sbjct: 310 LYNVSSLRKLYVSNNKITDFTGIEQLNKLGTLGVGSNGLVNIEPISQMSGIVELNLEKND 369
Query: 214 VSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNL 255
+ D T LS L L+L ++DVS SLS L NL
Sbjct: 370 IKDIT--SLSKLTGLQSLNLEENYVSDVS-----SLSNLINL 404
>UNIPROTKB|F1NDH7 [details] [associations]
symbol:TSKU "Tsukushin" species:9031 "Gallus gallus"
[GO:0021540 "corpus callosum morphogenesis" evidence=IEA]
[GO:0021670 "lateral ventricle development" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 IPI:IPI00682643
OMA:LTRVDCS GeneTree:ENSGT00390000016740 EMBL:AADN02059345
ProteinModelPortal:F1NDH7 Ensembl:ENSGALT00000001106 Uniprot:F1NDH7
Length = 371
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 60/233 (25%), Positives = 103/233 (44%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTIDSILEGNENKAPLAKISLAGTTFIN-EREA 63
LS+ N+A T + LE L+LS+ +++ + E + +PL I L+ ++ +
Sbjct: 93 LSYNNIAKISSTTFSRLRYLESLDLSHNSLEVLPEDCFSSSPLGDIDLSNNKLLDIALDV 152
Query: 64 FLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLRNLN 123
F +D+SN+ LS+ K++ ++ + ++ G+ + G LR LN
Sbjct: 153 FASKGQGKPLNVDLSNNMLSKIT-RNHEKSIPNIQ-NLNLSGNRLTSVPNLQGIPLRYLN 210
Query: 124 LSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSM--MPSLKFIDISNTDIKGF 181
L + G G L L LSLSG D +S S +P+L+ +D+SN
Sbjct: 211 LDGNPLAKIEKGDFKG-LKGLIHLSLSGLH-DFRELSPYSFKELPALQVLDLSNNPN--- 265
Query: 182 IQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
++ + AE + LN ++ LNL T VS L L ++LR
Sbjct: 266 LRSLTAEV--------IFGLNSIQELNLSGTGVSSLPKTVLKYLPSLKSITLR 310
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 73/265 (27%), Positives = 117/265 (44%)
Query: 3 PRLSFLNLAWTGVTKLPNISSLECLN-LSNCTIDSILEGNENKAP-LAKISLAGTTFINE 60
P++S LA G +P+ L C + + S+L G+ P + S +
Sbjct: 1 PQVSERMLAG-GAKSVPS-PLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCH 58
Query: 61 REAFLYI------ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVAC 114
R+ F+ + ET LL +L++ F + LE L+L+ +++ +VE A
Sbjct: 59 RKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFAS-FPHLEELELNENIVS--AVEPGAF 115
Query: 115 VGA-NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDI 173
NLR L L + R +G+ G L NL L +S +I + YM F D+
Sbjct: 116 NNLFNLRTLGLRSNRLKLIPLGVFTG-LSNLTKLDISENKIV-ILLDYM-------FQDL 166
Query: 174 SNTDIKGFIQQVGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLS 232
N +K +VG + DLV +S A LN LE+L LE+ ++ LS LI L
Sbjct: 167 YN--LKSL--EVG-DNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLR 221
Query: 233 LRNASLTDVSLHQLSSLSKLTNLSI 257
LR+ ++ + + L +L L I
Sbjct: 222 LRHLNINAIRDYSFKRLYRLKVLEI 246
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 63/281 (22%), Positives = 130/281 (46%)
Query: 8 LNLAWTGVTKLPNISSLECLNLSNCTID--SILEGNENKAPLAKISLAGT---TFINERE 62
+N++ T LPN+++L+ ++ C++ S L + PL +++++ +F +E
Sbjct: 812 VNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPL-RLNVSHNHIASFYDELS 870
Query: 63 AFLYIETSLLSFLDVSNSSLSRFCFLTQM-KALEHLDLSSSMIGDDSVEMVACVGAN-LR 120
+++YI LD+S++ +++ T + L L+L+ + +G S++ A L
Sbjct: 871 SYMYIYQ-----LDISHNHVTKSDSFTNLANTLRFLNLAHNQLG--SLQSHAFGDLEFLE 923
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKG 180
LN+++ +S G L +L+ L LS Q+D + S + L+ + I++ ++
Sbjct: 924 ILNVAHNNLTSLRRRSFQG-LNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRA 982
Query: 181 FIQQVGAETDL-----------VLSLTALQNLNH-LERLNLEQTQVS--DATLFPLSTFK 226
++V T L V + A ++ L + + + DA++F S F
Sbjct: 983 LPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQF- 1041
Query: 227 ELIHLSLRNASLTDVSLHQLSSLSKLTNLSIRDAVLTNSGL 267
L +SL +T + + S L+ LTNL + L + L
Sbjct: 1042 -LYDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNL 1081
>MGI|MGI:1346060 [details] [associations]
symbol:Tlr2 "toll-like receptor 2" species:10090 "Mus
musculus" [GO:0002224 "toll-like receptor signaling pathway"
evidence=ISO] [GO:0002238 "response to molecule of fungal origin"
evidence=IMP] [GO:0002282 "microglial cell activation involved in
immune response" evidence=ISO] [GO:0002687 "positive regulation of
leukocyte migration" evidence=IMP] [GO:0002752 "cell surface
pattern recognition receptor signaling pathway" evidence=IMP]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=IGI] [GO:0004872 "receptor activity" evidence=ISO]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006691 "leukotriene metabolic process"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=ISO]
[GO:0006955 "immune response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0008329 "pattern recognition
receptor activity" evidence=ISO] [GO:0009617 "response to
bacterium" evidence=IMP] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=ISO] [GO:0031224 "intrinsic to
membrane" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0032289 "central nervous system myelin formation"
evidence=ISO] [GO:0032493 "response to bacterial lipoprotein"
evidence=ISO] [GO:0032494 "response to peptidoglycan" evidence=IMP]
[GO:0032695 "negative regulation of interleukin-12 production"
evidence=IMP] [GO:0032700 "negative regulation of interleukin-17
production" evidence=IMP] [GO:0032722 "positive regulation of
chemokine production" evidence=ISO;IMP] [GO:0032728 "positive
regulation of interferon-beta production" evidence=IDA] [GO:0032733
"positive regulation of interleukin-10 production" evidence=ISO]
[GO:0032735 "positive regulation of interleukin-12 production"
evidence=IDA] [GO:0032741 "positive regulation of interleukin-18
production" evidence=IDA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=ISO;IDA;IMP] [GO:0032757
"positive regulation of interleukin-8 production" evidence=ISO]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IDA;IMP] [GO:0034123 "positive regulation of
toll-like receptor signaling pathway" evidence=ISO] [GO:0035354
"Toll-like receptor 1-Toll-like receptor 2 protein complex"
evidence=ISO] [GO:0035355 "Toll-like receptor 2-Toll-like receptor
6 protein complex" evidence=IPI] [GO:0042346 "positive regulation
of NF-kappaB import into nucleus" evidence=ISO] [GO:0042495
"detection of triacyl bacterial lipopeptide" evidence=ISO]
[GO:0042496 "detection of diacyl bacterial lipopeptide"
evidence=ISO] [GO:0042497 "triacyl lipopeptide binding"
evidence=ISO;IDA] [GO:0042498 "diacyl lipopeptide binding"
evidence=IDA] [GO:0042535 "positive regulation of tumor necrosis
factor biosynthetic process" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=ISO] [GO:0042834 "peptidoglycan
binding" evidence=ISO] [GO:0042892 "chloramphenicol transport"
evidence=IMP] [GO:0042995 "cell projection" evidence=ISO]
[GO:0044130 "negative regulation of growth of symbiont in host"
evidence=IMP] [GO:0044297 "cell body" evidence=ISO] [GO:0045087
"innate immune response" evidence=TAS] [GO:0045429 "positive
regulation of nitric oxide biosynthetic process" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046209 "nitric oxide
metabolic process" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO;IPI] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=ISO] [GO:0050715 "positive regulation of cytokine
secretion" evidence=IGI] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IMP] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0051637 "Gram-positive bacterial cell surface
binding" evidence=ISO] [GO:0051770 "positive regulation of
nitric-oxide synthase biosynthetic process" evidence=IDA]
[GO:0052033 "pathogen-associated molecular pattern dependent
induction by symbiont of host innate immune response" evidence=ISO]
[GO:0052063 "induction by symbiont of defense-related host nitric
oxide production" evidence=IMP] [GO:0060907 "positive regulation of
macrophage cytokine production" evidence=IMP] [GO:0070542 "response
to fatty acid" evidence=ISO] [GO:0070891 "lipoteichoic acid
binding" evidence=IDA] [GO:0071221 "cellular response to bacterial
lipopeptide" evidence=IMP;TAS] [GO:0071223 "cellular response to
lipoteichoic acid" evidence=ISO;IMP] [GO:0071224 "cellular response
to peptidoglycan" evidence=IMP] [GO:0071723 "lipopeptide binding"
evidence=ISO] [GO:0071726 "cellular response to diacyl bacterial
lipopeptide" evidence=ISO] [GO:0071727 "cellular response to
triacyl bacterial lipopeptide" evidence=ISO] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR017241 InterPro:IPR027185
Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:1346060 GO:GO:0016021 GO:GO:0030670
GO:GO:0009897 GO:GO:0050830 GO:GO:0050715 GO:GO:0006954
GO:GO:0045944 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0045087 GO:GO:0032722 GO:GO:0032755
GO:GO:0002687 GO:GO:0044130 GO:GO:0046982 GO:GO:0045429
GO:GO:0004888 GO:GO:0032695 GO:GO:0032760 GO:GO:0002755
GO:GO:0002238 GO:GO:0042535 GO:GO:0032735 GO:GO:0051770
GO:GO:0070891 GO:GO:0071223 GO:GO:0071221 GO:GO:0060907
GO:GO:0002752 GO:GO:0032728 SUPFAM:SSF52200 GO:GO:0032700
GO:GO:0071224 GO:GO:0035354 GO:GO:0042497 eggNOG:NOG251801
HOGENOM:HOG000110611 HOVERGEN:HBG108574 KO:K10159 OrthoDB:EOG4SN1N6
PANTHER:PTHR24365:SF17 CTD:7097 GO:GO:0035355 GO:GO:0042498
GO:GO:0042892 GO:GO:0052063 GO:GO:0032741 EMBL:AF185284
EMBL:AF124741 EMBL:AF216289 EMBL:AF165189 EMBL:AK005043
EMBL:AK154504 IPI:IPI00131898 RefSeq:NP_036035.3 UniGene:Mm.87596
PDB:2Z81 PDB:2Z82 PDB:3A79 PDB:3A7B PDB:3A7C PDBsum:2Z81
PDBsum:2Z82 PDBsum:3A79 PDBsum:3A7B PDBsum:3A7C
ProteinModelPortal:Q9QUN7 SMR:Q9QUN7 IntAct:Q9QUN7 STRING:Q9QUN7
PhosphoSite:Q9QUN7 PRIDE:Q9QUN7 GeneID:24088 KEGG:mmu:24088
UCSC:uc008ppn.2 InParanoid:Q9QUN7 ChEMBL:CHEMBL1075106
EvolutionaryTrace:Q9QUN7 NextBio:304101 CleanEx:MM_TLR2
Genevestigator:Q9QUN7 GermOnline:ENSMUSG00000027995 Uniprot:Q9QUN7
Length = 784
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 64/260 (24%), Positives = 119/260 (45%)
Query: 21 ISSLECLNLSNCTIDSILEGNENKAP----LAKISLAGTTFINEREAFLYIETSLL-SFL 75
I L + +CT++ + + N +++ L K+ ++ + +L+ + S + S L
Sbjct: 276 ILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLL 335
Query: 76 D------VSNSSLSRF-CFLTQ-MKALEHLDLSSSMIGDDSVEMVACVGA--NLRNLNLS 125
+ V NS + C +Q +K+LE LDLS +++ ++ ++ AC GA +L+ L LS
Sbjct: 336 EKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS 395
Query: 126 NTRFSSAG-VGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
S G + L NL L +S S ++F+++S+T I+ ++
Sbjct: 396 QNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDS-CQWPEKMRFLNLSSTGIR-VVKT 453
Query: 185 VGAETDLVLSLTALQNLNHLERL--NLEQTQVSD---ATLFPLSTFKELIHLSLRNASLT 239
+T VL ++ NL+ L++ +S TL S F L+ + +R +++
Sbjct: 454 CIPQTLEVLDVSN-NNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKIRENAVS 512
Query: 240 DVSLHQLSSLSKLTNLSIRD 259
S QL S KL L D
Sbjct: 513 TFSKDQLGSFPKLETLEAGD 532
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 118 (46.6 bits), Expect = 0.00063, P = 0.00063
Identities = 69/254 (27%), Positives = 112/254 (44%)
Query: 14 GVTKLPNISSLECLN-LSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYI---- 67
G+ +P+ L C + + S+L G+ P + S + R+ F+ +
Sbjct: 5 GMRSMPS-PLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGI 63
Query: 68 --ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNL 124
ET LL +L++ F + LE L+L+ +++ +VE A NLR L L
Sbjct: 64 PTETRLLDLGKNRIKTLNQDEFAS-FPHLEELELNENIVS--AVEPGAFNNLFNLRTLGL 120
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
+ R +G+ G L NL L +S +I + YM F D+ N +K +
Sbjct: 121 RSNRLKLIPLGVFTG-LSNLTKLDISENKIV-ILLDYM-------FQDLYN--LKSL--E 167
Query: 185 VGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
VG + DLV +S A LN LE+L LE+ ++ LS LI L LR+ ++ +
Sbjct: 168 VG-DNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 226
Query: 244 HQLSSLSKLTNLSI 257
+ L +L L I
Sbjct: 227 YSFKRLYRLKVLEI 240
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 118 (46.6 bits), Expect = 0.00063, P = 0.00063
Identities = 69/254 (27%), Positives = 112/254 (44%)
Query: 14 GVTKLPNISSLECLN-LSNCTIDSILEGNENKAP-LAKISLAGTTFINEREAFLYI---- 67
G+ +P+ L C + + S+L G+ P + S + R+ F+ +
Sbjct: 11 GMRSMPS-PLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGI 69
Query: 68 --ETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNL 124
ET LL +L++ F + LE L+L+ +++ +VE A NLR L L
Sbjct: 70 PTETRLLDLGKNRIKTLNQDEFAS-FPHLEELELNENIVS--AVEPGAFNNLFNLRTLGL 126
Query: 125 SNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQ 184
+ R +G+ G L NL L +S +I + YM F D+ N +K +
Sbjct: 127 RSNRLKLIPLGVFTG-LSNLTKLDISENKIV-ILLDYM-------FQDLYN--LKSL--E 173
Query: 185 VGAETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSL 243
VG + DLV +S A LN LE+L LE+ ++ LS LI L LR+ ++ +
Sbjct: 174 VG-DNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 232
Query: 244 HQLSSLSKLTNLSI 257
+ L +L L I
Sbjct: 233 YSFKRLYRLKVLEI 246
>TAIR|locus:2094613 [details] [associations]
symbol:RLP38 "receptor like protein 38" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006952 "defense response" evidence=ISS] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210 Pfam:PF08263
EMBL:AB026655 HOGENOM:HOG000116562 IPI:IPI00522339
RefSeq:NP_188953.1 UniGene:At.65133 ProteinModelPortal:Q9LS79
SMR:Q9LS79 EnsemblPlants:AT3G23120.1 GeneID:821887
KEGG:ath:AT3G23120 TAIR:At3g23120 InParanoid:Q9LS79 OMA:YARNTSS
PhylomeDB:Q9LS79 ProtClustDB:CLSN2684197 Genevestigator:Q9LS79
Uniprot:Q9LS79
Length = 784
Score = 119 (46.9 bits), Expect = 0.00067, P = 0.00066
Identities = 68/266 (25%), Positives = 117/266 (43%)
Query: 24 LECLNLSNCTIDSILEGNENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLS 83
++C + T D+IL G L +S A T+ + F + L+ LD+SN +L
Sbjct: 68 IDCCSWGGVTCDAIL-GEVISLKLYFLSTASTSLKSSSALF---KLQHLTHLDLSNCNLQ 123
Query: 84 RFC--FLTQMKALEHLDLSSS-MIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGH 140
+ + L HLDLS++ ++G E+ A +G NL L + R + G +
Sbjct: 124 GEIPSSIENLSHLTHLDLSTNHLVG----EVPASIG-NLNQLEYIDLRGNHLR-GNIPTS 177
Query: 141 LPNLEILSLSGTQIDDYAIS--YMSMMPSLKFIDISNTDIKGF----------IQQV-GA 187
NL LSL +++ +S + SL +D+S+ K F ++Q+ G
Sbjct: 178 FANLTKLSLLDLHENNFTGGDIVLSNLTSLAILDLSSNHFKSFFSADLSGLHNLEQIFGN 237
Query: 188 ETDLV-LSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQL 246
E V L +L ++ L+++ L Q Q F ++ L++ + S +
Sbjct: 238 ENSFVGLFPASLLKISSLDKIQLSQNQFEGPIDFGNTSSSS--RLTMLDISHNNFIGRVP 295
Query: 247 SSLSKLTNLSIRDAVLTNSGLGSFKP 272
SSLSKL NL + D L+++ P
Sbjct: 296 SSLSKLVNLELLD--LSHNNFRGLSP 319
>UNIPROTKB|Q723P8 [details] [associations]
symbol:inlF "Internalin" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00746 GO:GO:0005618
GO:GO:0009405 GO:GO:0003824 eggNOG:COG4886 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AE017262 GenomeReviews:AE017262_GR
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR019948
InterPro:IPR019931 TIGRFAMs:TIGR01167 Gene3D:2.60.40.1220
InterPro:IPR014755 InterPro:IPR013378 InterPro:IPR012569
Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543 RefSeq:YP_013036.1
PDB:4FMZ PDBsum:4FMZ ProteinModelPortal:Q723P8 STRING:Q723P8
GeneID:2797185 KEGG:lmf:LMOf2365_0429 PATRIC:20322071
HOGENOM:HOG000011905 OMA:QGYTFDG ProtClustDB:CLSK225141
Uniprot:Q723P8
Length = 823
Score = 119 (46.9 bits), Expect = 0.00071, P = 0.00071
Identities = 66/270 (24%), Positives = 125/270 (46%)
Query: 5 LSFLNLAWTGVTKLPNISSLECLNLSNCTI--DSI--LEGNENKAPLAKISLAGTTFINE 60
L +LNL +T + +S+L + L+N I + I + +N L ++ L I++
Sbjct: 101 LEYLNLNGNQITDISPLSNL--VKLTNLYIGTNKITDISALQNLTNLRELYLNEDN-ISD 157
Query: 61 REAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLDLSSSMIGDDSVEMVACVGANLR 120
+ T + S +N +LS L+ M L +L ++ S + D V +A + +L
Sbjct: 158 ISPLANL-TKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKD--VTPIANL-TDLY 213
Query: 121 NLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA-ISYMSMMPSLKFIDISNTDIK 179
+L+L+ + + LA L +L + QI D ++ M+ + SLK + TD+
Sbjct: 214 SLSLNYNQIED--ISPLAS-LTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLS 270
Query: 180 ---GFIQQVGAE--TDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLR 234
Q E T+ + + A+++L L+ LN+ Q+SD ++ L+ +L L L
Sbjct: 271 PLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISV--LNNLSQLNSLFLN 328
Query: 235 NASLTDVSLHQLSSLSKLTNLSIRDAVLTN 264
N L + + + L+ LT L + +T+
Sbjct: 329 NNQLGNEDMEVIGGLTNLTTLFLSQNHITD 358
>TAIR|locus:2163665 [details] [associations]
symbol:MOL1 "MORE LATERAL GROWTH1" species:3702
"Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM;IDA]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0016301 "kinase activity" evidence=ISS]
[GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:2000604 "negative
regulation of secondary growth" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF56112 GO:GO:0004674
eggNOG:COG4886 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
EMBL:AB025621 EMBL:FJ708799 IPI:IPI00527860 RefSeq:NP_199948.1
UniGene:At.55486 ProteinModelPortal:Q9FGN6 SMR:Q9FGN6 PaxDb:Q9FGN6
PRIDE:Q9FGN6 EnsemblPlants:AT5G51350.1 GeneID:835209
KEGG:ath:AT5G51350 TAIR:At5g51350 InParanoid:Q9FGN6 OMA:PAIPHGD
ProtClustDB:CLSN2687394 Genevestigator:Q9FGN6 GO:GO:2000604
Uniprot:Q9FGN6
Length = 895
Score = 119 (46.9 bits), Expect = 0.00078, P = 0.00078
Identities = 67/264 (25%), Positives = 119/264 (45%)
Query: 11 AWTGVTKLPNISSLECLNLSNCTIDSILEGNENKA--PLAKISLAGTTFINEREAFLYIE 68
+W+GV N +S+ ++LS+ + L G E L +++++ +F E A ++
Sbjct: 65 SWSGVRCNQNSTSVVSVDLSSKNLAGSLSGKEFLVFTELLELNISDNSFSGEFPAEIFFN 124
Query: 69 TSLLSFLDVSNSSLS-RFCFL----TQMKALEHLD-LSSSMIGDDSVEMVACVGANLRNL 122
+ L LD+S ++ S RF + +K L LD LS+S G + + NL+ L
Sbjct: 125 MTNLRSLDISRNNFSGRFPDGNGGDSSLKNLIFLDALSNSFSGPLPIHLSQL--ENLKVL 182
Query: 123 NLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFI 182
NL+ + F+ + + G NLE L L G + + + + +L ++I +G I
Sbjct: 183 NLAGSYFTGS-IPSQYGSFKNLEFLHLGGNLLSGHIPQELGNLTTLTHMEIGYNSYEGVI 241
Query: 183 Q-QVGAETDLVLSLTALQNLN-HLERLNLEQTQVSDATLFPLSTFKELIH-----LSLRN 235
++G ++L A NL+ L + T++ LF +E+ SL N
Sbjct: 242 PWEIGYMSELKYLDIAGANLSGFLPKHFSNLTKLESLFLFRNHLSREIPWELGEITSLVN 301
Query: 236 ASLTD--VSLHQLSSLSKLTNLSI 257
L+D +S S S L NL +
Sbjct: 302 LDLSDNHISGTIPESFSGLKNLRL 325
>UNIPROTKB|A0ENH4 [details] [associations]
symbol:TLR3 "Toll-like receptor 3" species:9823 "Sus
scrofa" [GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045359 "positive regulation of interferon-beta
biosynthetic process" evidence=IEA] [GO:0045356 "positive
regulation of interferon-alpha biosynthetic process" evidence=IEA]
[GO:0045080 "positive regulation of chemokine biosynthetic process"
evidence=IEA] [GO:0045078 "positive regulation of interferon-gamma
biosynthetic process" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042346
"positive regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0034346 "positive regulation of type III
interferon production" evidence=IEA] [GO:0034123 "positive
regulation of toll-like receptor signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032728 "positive regulation of interferon-beta production"
evidence=IEA] [GO:0032722 "positive regulation of chemokine
production" evidence=IEA] [GO:0007252 "I-kappaB phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0050729 "positive regulation of
inflammatory response" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0002756 "MyD88-independent toll-like
receptor signaling pathway" evidence=IEA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027173 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0005737
GO:GO:0006952 GO:GO:0043123 GO:GO:0046330 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0032722 GO:GO:0032755 GO:GO:0009615
GO:GO:0051092 GO:GO:0032757 GO:GO:0071260 InterPro:IPR000372
SMART:SM00013 GO:GO:0032760 GO:GO:0043330 GO:GO:0032735
GO:GO:0042346 GO:GO:0045078 GO:GO:0032728 GO:GO:0007252
GO:GO:0045080 SUPFAM:SSF52200 GO:GO:0045359
GeneTree:ENSGT00680000099674 GO:GO:0034123 CTD:7098
HOVERGEN:HBG023181 KO:K05401 PANTHER:PTHR24365:SF5 GO:GO:0045356
GO:GO:0034346 EMBL:CU466336 EMBL:DQ266435 EMBL:AB291812
RefSeq:NP_001090913.1 UniGene:Ssc.51668 STRING:A0ENH4
Ensembl:ENSSSCT00000017207 GeneID:100037937 KEGG:ssc:100037937
OMA:LNLGYNI Uniprot:A0ENH4
Length = 905
Score = 119 (46.9 bits), Expect = 0.00079, P = 0.00079
Identities = 76/270 (28%), Positives = 129/270 (47%)
Query: 3 PRLSFLNLAWTGVTKLPNISSLECLNLSNCTI--DSI--LEGN--ENKAPLAKISLAGTT 56
P L LNL +++L + + + C+NL + +SI ++ N +N L K+ L+
Sbjct: 100 PLLEILNLQHNELSQLSDKTFIFCMNLIELHLMSNSIQKIQNNPFKNLKNLIKLDLSHNG 159
Query: 57 FINEREAF-LYIETSLLSFLDVSN--SSLSR--FCFLTQMKALEHLDLSSSMIGDDSVEM 111
+ + L +E +L L +N S+L R FL +L+ L+LSS+ I + S
Sbjct: 160 LSSTKLGTQLQLE-NLQELLLANNKISALKREELDFLGN-SSLKRLELSSNQIQEFSPGC 217
Query: 112 VACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFI 171
+G L L+L+N + S + L L N I +LS + I Y S + LK
Sbjct: 218 FHAIG-KLFGLSLNNVKLSPSLTEKLCLELSNTSIENLSLSNIQLYKTSNTTFF-GLKQT 275
Query: 172 DISNTDIK-GFIQQVGAETDLVLSLTALQNLNH--LERLNLEQTQVSDATLFPLSTFKEL 228
++S D+ + +G + S L +L + LE N+E+ +S +L+ LS K
Sbjct: 276 NLSMLDLSHNSLSVIGND-----SFAWLPHLKYFFLEYNNIER--LSSRSLYGLSNVK-- 326
Query: 229 IHLSLRNASLTDVSLHQLSSLSKLTNLSIR 258
+L+LR S T S+ L+SL K+ + S +
Sbjct: 327 -YLNLRR-SFTKQSI-SLASLPKIEDFSFQ 353
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 65/233 (27%), Positives = 104/233 (44%)
Query: 34 IDSILEGNENKAP-LAKISLAGTTFINEREAFLYI------ETSLLSFLDVSNSSLSRFC 86
+ S+L G+ P + S + R+ F+ + ET LL +L++
Sbjct: 25 LGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDE 84
Query: 87 FLTQMKALEHLDLSSSMIGDDSVEMVACVGA-NLRNLNLSNTRFSSAGVGILAGHLPNLE 145
F + LE L+L+ +++ +VE A NLR L L + R +G+ G L NL
Sbjct: 85 FAS-FPHLEELELNENIVS--AVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTG-LSNLT 140
Query: 146 ILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLV-LSLTALQNLNHL 204
L +S +I + YM F D+ N +K +VG + DLV +S A LN L
Sbjct: 141 KLDISENKIV-ILLDYM-------FQDLYN--LKSL--EVG-DNDLVYISHRAFSGLNSL 187
Query: 205 ERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLSI 257
E+L LE+ ++ LS LI L LR+ ++ + + L +L L I
Sbjct: 188 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 240
>TAIR|locus:2037308 [details] [associations]
symbol:RLP14 "AT1G74180" species:3702 "Arabidopsis
thaliana" [GO:0007165 "signal transduction" evidence=IC]
[GO:0009507 "chloroplast" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002684 GO:GO:0009507
InterPro:IPR013210 Pfam:PF08263 IPI:IPI00525645 RefSeq:NP_177558.4
UniGene:At.52506 ProteinModelPortal:F4HTV4 SMR:F4HTV4 PRIDE:F4HTV4
EnsemblPlants:AT1G74180.1 GeneID:843758 KEGG:ath:AT1G74180
OMA:HELYLEG Uniprot:F4HTV4
Length = 976
Score = 119 (46.9 bits), Expect = 0.00087, P = 0.00087
Identities = 51/216 (23%), Positives = 102/216 (47%)
Query: 42 ENKAPLAKISLAGTTFINEREAFLYIETSLLSFLDVSNSSLSRFCFLTQMKALEHLD--- 98
+N L + L+ + + F ++E L LD+S + S L ++K L +L+
Sbjct: 184 KNLTKLELLDLSRSGYNGSIPEFTHLEK--LKALDLSANDFSSLVELQELKVLTNLEVLG 241
Query: 99 LSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYA 158
L+ + + + V C NLR L+L F + + G+L L +L LS Q+
Sbjct: 242 LAWNHLDGPIPKEVFCEMKNLRQLDLRGNYFEGQ-LPVCLGNLNKLRVLDLSSNQLSGNL 300
Query: 159 ISYMSMMPSLKFIDISNTDIKGF--IQQVGAETDL-VLSLTALQNLNHLERLN--LEQTQ 213
+ + + SL+++ +S+ + +GF + + T L V L++ + +E + L + Q
Sbjct: 301 PASFNSLESLEYLSLSDNNFEGFFSLNPLANLTKLKVFRLSSTSEMLQVETESNWLPKFQ 360
Query: 214 VSDATLFPLSTFKELIHLSL--RNASLTDVSLHQLS 247
++ A L P + ++ + + N L D+S ++LS
Sbjct: 361 LTVAAL-PFCSLGKIPNFLVYQTNLRLVDLSSNRLS 395
>TAIR|locus:2825762 [details] [associations]
symbol:RLP6 "AT1G45616" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=ISS] [GO:0007165
"signal transduction" evidence=IC;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0002237 "response to molecule of bacterial
origin" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG4886 EMBL:AC083835 InterPro:IPR013210 Pfam:PF08263
HOGENOM:HOG000116562 IPI:IPI00539296 PIR:H96510 RefSeq:NP_175139.1
UniGene:At.65982 ProteinModelPortal:Q9C637 SMR:Q9C637 PaxDb:Q9C637
PRIDE:Q9C637 EnsemblPlants:AT1G45616.1 GeneID:841101
KEGG:ath:AT1G45616 TAIR:At1g45616 InParanoid:Q9C637 OMA:SHNTLEG
PhylomeDB:Q9C637 ProtClustDB:CLSN2681899 Genevestigator:Q9C637
Uniprot:Q9C637
Length = 994
Score = 119 (46.9 bits), Expect = 0.00089, P = 0.00089
Identities = 68/263 (25%), Positives = 115/263 (43%)
Query: 12 WTGVTKLPNISSLECLNLSNCTIDSILEGNENK---APLAKISLAGTTFINEREAFLYIE 68
W G+T + L+LS + LE N + L ++LA F N + +
Sbjct: 87 WDGITCDTKSGKVTGLDLSCSCLHGRLEPNSSLFRLQHLQSVNLAYNNFTNSPIPAEFSK 146
Query: 69 TSLLSFLDVSNSSLSRFCF--LTQMKALEHLDLSSSMIGDDS---------VEMVACVGA 117
L L++S SS S L Q+ L LDLSSS S + ++A
Sbjct: 147 FMRLERLNLSRSSFSGHISIKLLQLTNLVSLDLSSSFPYSPSSLSIEKPLFLHLLALNFM 206
Query: 118 NLRNLNLSNTRFSSAGVGILAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDIS-NT 176
NLR L++S+ SSA + I ++ +L L+L G + + + ++P+L+ I + N
Sbjct: 207 NLRELDMSSVDISSA-IPIEFSYMWSLRSLTLKGCNLLGRFPNSVLLIPNLESISLDHNL 265
Query: 177 DIKGFIQQVGAETDLVLSLTALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNA 236
+++G + L+N N L +L++ T S +S K L L L+ +
Sbjct: 266 NLEGSLPNF------------LRN-NSLLKLSIYNTSFSGTIPNSISNLKHLTSLKLQQS 312
Query: 237 SLTDVSLHQLSSLSKLTNLSIRD 259
+ + L SLS L+NL + +
Sbjct: 313 AFSGRIPSSLRSLSHLSNLVLSE 335
>TAIR|locus:2079721 [details] [associations]
symbol:AT3G07550 "AT3G07550" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
PROSITE:PS50181 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AC009853 EMBL:AK118929 EMBL:BT008530 IPI:IPI00516514
RefSeq:NP_566312.1 RefSeq:NP_850534.1 UniGene:At.18420
UniGene:At.28242 ProteinModelPortal:Q9SRR1 SMR:Q9SRR1 IntAct:Q9SRR1
PRIDE:Q9SRR1 EnsemblPlants:AT3G07550.1 EnsemblPlants:AT3G07550.2
GeneID:819944 KEGG:ath:AT3G07550 TAIR:At3g07550 eggNOG:NOG273409
HOGENOM:HOG000243751 InParanoid:Q9SRR1 OMA:IAKGCPL PhylomeDB:Q9SRR1
ProtClustDB:CLSN2688150 Genevestigator:Q9SRR1 Uniprot:Q9SRR1
Length = 395
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 76 DVSNSSLSRFCFLTQMKALEHLDLSS-SMIGDDSVEMVACVGANLRNLNLSNT-RFSSAG 133
DVS+ L R LT+ + LEHL LS +++ D S++ + GA L L L S G
Sbjct: 77 DVSSHHLHRL--LTRFQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDG 134
Query: 134 VGILAGHLPNLEILSLSGTQIDDYAISYMSMMP-SLKFIDIS 174
+ +A PNL ++SL I D + ++ SLK +++S
Sbjct: 135 ISTIASFCPNLSVVSLYRCNISDIGLETLARASLSLKCVNLS 176
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00095
Identities = 65/243 (26%), Positives = 106/243 (43%)
Query: 22 SSLECLNLSNCTIDSILEGN-ENKAPLAKISLA--GTTFINEREAFLYIETSLLSFLDVS 78
S+L+ L L ++ I EG ++ L K++L G T ++ R F ++ L L +
Sbjct: 149 SNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSPR-VFQHLGN--LQVLRLY 205
Query: 79 NSSLSRFCFLT--QMKALEHLDLSSSMIGDDSVEMVACVGANLRNLNLSNTRFSSAGVGI 136
+ LS T + L+ L L + IG S + NL+ L LSN S GI
Sbjct: 206 ENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHN-NRNLQRLYLSNNHISHLPPGI 264
Query: 137 LAGHLPNLEILSLSGTQIDDYAISYMSMMPSLKFIDISNTDIKGFIQQVGAETDLVLSLT 196
LP+L L+L G + + + MP+L+ + + N I L
Sbjct: 265 FM-QLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITS------------LPDN 311
Query: 197 ALQNLNHLERLNLEQTQVSDATLFPLSTFKELIHLSLRNASLTDVSLHQLSSLSKLTNLS 256
A +LN L+ L L Q+S + + L LSL +L D+ + SL+ L N+S
Sbjct: 312 AFSHLNQLQVLILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVS 371
Query: 257 IRD 259
+++
Sbjct: 372 LQN 374
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 384 359 0.00081 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 612 (65 KB)
Total size of DFA: 205 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.31u 0.09s 29.40t Elapsed: 00:00:02
Total cpu time: 29.33u 0.09s 29.42t Elapsed: 00:00:02
Start: Mon May 20 21:08:50 2013 End: Mon May 20 21:08:52 2013